mRNA_C-linearis_contig9.16592.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: D8LSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK2_ECTSI) HSP 1 Score: 220 bits (560), Expect = 1.380e-70 Identity = 106/144 (73.61%), Postives = 123/144 (85.42%), Query Frame = 1
Query: 175 LASAGLSRSKVDLERLAESVDIYHVNGQVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKIAHADDQRSRGDEEEEGEATATAVGENQVVGMVATVENRLQE 606
+ SAGLSRS+ DLERLAES+ IYHV+GQ+F+HST DGIAKPKIVPTGDQARAFV+ +AG GSLEE LTT SELCK KP+GLDAVRWLAEWLLENNPNKPK+AHADD+R G++ +E TA+G+ VVGMVATVE+RLQE
Sbjct: 1 MGSAGLSRSRGDLERLAESIGIYHVHGQIFIHSTFDGIAKPKIVPTGDQARAFVEGMRAGTGSLEELLTTPFSELCKVKPEGLDAVRWLAEWLLENNPNKPKVAHADDERDSGEDGDEAGGGETALGDGPVVGMVATVESRLQE 144
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: A0A7S2XW71_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW71_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.420e-52 Identity = 85/151 (56.29%), Postives = 110/151 (72.85%), Query Frame = 1
Query: 34 LHTVGRKLEDGAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNG-QVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKI 483
L+ GR+L DG MYII + D+ PAGVL++AY Q TS Y LS SE EL AGLSR K DL+ L ES+D+ ++G + F+ S++ GI PK++P G +A F+++ AG +L E LTTALSELCK KP GLDAVRWL +WLLENNPN+P+I
Sbjct: 6 LYVQGRQLSDGGMYIISVTDLDPAGVLIKAYNQVTSSEYYLSPSEDELEEAGLSRQKEDLKTLVESIDLTELSGGRTFLRSSLAGIKDPKVIPQGAEAAQFIKSIPAGTDTLPELLTTALSELCKVKPSGLDAVRWLGQWLLENNPNQPQI 156
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: A0A7S2WUZ4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUZ4_9STRA) HSP 1 Score: 160 bits (406), Expect = 7.270e-47 Identity = 78/159 (49.06%), Postives = 110/159 (69.18%), Query Frame = 1
Query: 22 KSASLHTVGRKLEDGAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNGQVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKIAHADD 498
K A+++TVGR+L DG MYI + D+ PAG+L++AY TS T S SE EL +A ++R++ L +L +S DI G + S + GI KPK+VP GD R F+ AT AG+ +L E LTTAL+ELCK KP L+AVRWL +WL++NNPN+P++A ++
Sbjct: 11 KKAAIYTVGRQLNDGDMYIFSVYDLEPAGLLIRAYCASTSSELTTSPSESELYAASITRAEKHLAQLCDSYDIVTKGGTPLLESNLTGINKPKLVPQGDGVRQFITATPAGSETLPELLTTALTELCKQKPAKLEAVRWLGQWLIDNNPNQPQVAEPEE 169
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: A0A8J2WSR2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSR2_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.880e-46 Identity = 74/161 (45.96%), Postives = 112/161 (69.57%), Query Frame = 1
Query: 16 AKKSASLHTVGRKLEDGAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNGQVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKIAHADD 498
A + +++ R L+D +YI+ + D P+G+LV+AY+Q S Y + ++E EL +A LSRS+ L +LAES+ + ++G++ + S+I GI KPK++P+GD R F+ TKAG +L +FL+ ALSELCK KP GLDAVRWL +W+L+NNPN+P + D
Sbjct: 2 AGRKVAIYNCARALDDNDIYILQMFDTSPSGLLVKAYRQTESVEYFMPITESELDNAALSRSQQALSKLAESLSLVELSGKLVLMSSITGIIKPKVLPSGDGVRQFIGRTKAGRDTLSDFLSEALSELCKEKPVGLDAVRWLGQWILKNNPNQPTVEEPTD 162
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: A0A836CDF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDF1_9STRA) HSP 1 Score: 157 bits (397), Expect = 9.590e-46 Identity = 78/151 (51.66%), Postives = 103/151 (68.21%), Query Frame = 1
Query: 55 LEDGAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNGQVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDG---LDAVRWLAEWLLENNPNKPKIAHADD 498
L+DG MY I + DM PAGV+++A T+ Y L +E ELA+A L R++ DL RLAESVD+ V G F++S++ GI KPKI+PTG+ A+ F+ +GSL + LTT LSELCK KP G +DAVRWL EWLL NNPN+P + +D
Sbjct: 1 LQDGDMYTIGIFDMEPAGVVIRALNNATAKYYALGPTESELAAAKLGRNESDLARLAESVDLLEVGGTTFIYSSLPGICKPKIIPTGETAKDFMNGLTLRDGSLVQLLTTGLSELCKVKPQGPGGIDAVRWLGEWLLANNPNQPAVEEPED 151
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: F0YNF8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNF8_AURAN) HSP 1 Score: 137 bits (344), Expect = 1.410e-37 Identity = 70/161 (43.48%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 16 AKKSASLHTVGRKLEDGAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNGQVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKIAHADD 498
A + ++ R L D +YII + D P+G+LV+AY Q S Y + ++EGEL A L+R + L RLAES+D+ G +F+ S+I GIAKPK F+ T+AG+G+L FL AL+ELC+ KP GL+AV+ L EW+LE+NPN+P + +D
Sbjct: 2 AGRKVAISNCARALNDNEIYIIQIFDNAPSGLLVKAYLQAKSLEYFMPITEGELEKAALNRGEAALTRLAESIDLVEKGGAIFLESSIPGIAKPK----------FIGRTRAGDGTLPAFLAKALAELCRDKPAGLEAVKRLGEWMLEHNPNQPAVDEPED 152
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: A0A024UQM8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQM8_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 2.980e-21 Identity = 49/142 (34.51%), Postives = 82/142 (57.75%), Query Frame = 1
Query: 64 GAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNG--QVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKI 483
G +++ L D P+GV+ A T++++T + S EL +A L+++ D L ES+ + G ++ +HS++ G+ P + T A+ ++ +AGN + + L+ L LC KP GL A+ L +WLLENNPNKPK+
Sbjct: 16 GEDHVVTLYDTEPSGVVCMAVNSATTNKFTRAFSSAELKAAKLTKTPSDYFHLVESLYFVAIGGVNELQLHSSLPGMRPPAAIATATAAQHYLTNAQAGNENFTQVLSRGLIMLCNDKPMGLQAITRLGKWLLENNPNKPKV 157
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: W4HE35_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE35_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 8.110e-21 Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 64 GAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNG--QVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKI 483
G +++ L D PAGVL T++RYT + S EL +A L++++ D L ES+ G ++ +HS++ G+ P T A+ ++ ++GN + L+ L LCK KP GL A+ L +WLLENNPNKPK+
Sbjct: 16 GEDHVVALYDTEPAGVLCTVINTTTTNRYTRAFSADELKAAKLTKTQADYFHLVESLFFAPSGGVNELQLHSSLAGMRPPVAFATAAAAQHYLTNAQSGNERFSQVLSRGLMMLCKDKPMGLQAITRLGKWLLENNPNKPKV 157
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: A0A6G0XFQ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XFQ6_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 5.420e-18 Identity = 46/143 (32.17%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 61 DGAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNG--QVFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKI 483
+G + I L D P G++ T+ +Y + S L + ++++K D RLAES+ + G ++ +HS++ G+++P+ + T + A ++ +G + L+ L LCK KP GL AV L +WL+ENNPN+PK+
Sbjct: 16 EGNDHSISLYDAEPGGLVAIVVNTGTNAKYIRAFSTANLRATQVTKTKPDYYRLAESLYLAPAGGTHELQIHSSLRGMSQPEAIATAEAAHHYLTNASSGPEKFTQVLSRGLVMLCKDKPMGLQAVTRLGKWLVENNPNRPKV 158
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Match: A0A485LA18_9STRA (Aste57867_18178 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LA18_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 4.950e-15 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 1
Query: 58 EDGAMYIIDLEDMCPAGVLVQAYKQETSDRYTLSVSEGELASAGLSRSKVDLERLAESVDIYHVNGQ-VFVHSTIDGIAKPKIVPTGDQARAFVQATKAGNGSLEEFLTTALSELCKAKPDGLDAVRWLAEWLLENNPNKPKI 483
ED A+ + D E P G++ A + +Y + S EL +A L++S D L ES+ + + +HS++ G+ P+ + T A ++ AG+ L + L+ L LCK KP GL A+ L +WLLENNPNKPK+
Sbjct: 53 EDHAVTLYDTE---PGGLVCIAVNTHNNIKYVRTFSYAELRAAKLTKSTADYFHLVESLYFTPTGTKDLLLHSSLAGMRTPEPLATAAAADHYLNNVAAGS-KLTQVLSKGLIALCKDKPMGLQAITRLGKWLLENNPNKPKV 191 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16592.1 >prot_C-linearis_contig9.16592.1 ID=prot_C-linearis_contig9.16592.1|Name=mRNA_C-linearis_contig9.16592.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=203bp MSTSWAKKSASLHTVGRKLEDGAMYIIDLEDMCPAGVLVQAYKQETSDRYback to top mRNA from alignment at C-linearis_contig9:1657640..1659906- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16592.1 ID=mRNA_C-linearis_contig9.16592.1|Name=mRNA_C-linearis_contig9.16592.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2267bp|location=Sequence derived from alignment at C-linearis_contig9:1657640..1659906- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:1657640..1659906- >mRNA_C-linearis_contig9.16592.1 ID=mRNA_C-linearis_contig9.16592.1|Name=mRNA_C-linearis_contig9.16592.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at C-linearis_contig9:1657640..1659906- (Chordaria linearis ClinC8C monoicous)back to top |