mRNA_C-linearis_contig9.16590.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE) HSP 1 Score: 559 bits (1440), Expect = 4.140e-191 Identity = 327/503 (65.01%), Postives = 366/503 (72.76%), Query Frame = 3
Query: 195 MARSATPD--AARLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAIPRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWARCCFKEDPVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFNAPSLQRDPAKKGAIVRMLERGPAFRARSFLWPPGTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCAVAGDAGDACAAGDAGGGEISAAGAAA-AGGGCADGDXXXXXXXEGGDDDGAADVNSLPGRTSKTPLGVRIYRAKSE-AFLV 1691
MARS T AA+LL +RQRNEAGVE+ LAAG S+DGSSE DWRP++AAAASG V MA+ LI + AN+DLGSL+DLRCSDGLEVLGKGVRALHVAINHYH+DVFR+LL+AGA+PDSANGKGLTPLMLTCILED RG +RA+MARE KTALGFAAAR Q DLIDILL +APTTLNRATPDGLTPLYAAAMSGK +AV+HLL AGA+QPPASAEKDMCPLVAAVRENH++VV+VLL+D+GM AI G + IPRAVGAAA+ARKGRA IV+MLL AEG ER+ HWARC +KEDPVLHCAVSFGNISA RVLLAAGADETAEN +GR AREV+GFNAPSLQRDPAKKGAIVRML RGPA+RARS+ WP T A V G +GDACA GG+ A G A+GD D D+ + G S PLGVRIYR KS AFLV
Sbjct: 109 MARSVTKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWP-ATARAYTAGHTCAAAATTAAPGACGAAAASSDYVRGSSFV----GGSGDACAVAPPRGGDAXXXXXXREADGARANGDTCGGRASV----DNGTDLPAAHGSGSSAPLGVRIYRPKSRNAFLV 602
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 558 bits (1439), Expect = 4.640e-191 Identity = 336/503 (66.80%), Postives = 378/503 (75.15%), Query Frame = 3
Query: 195 MARSATPD--AARLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAIPRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWARCCFKEDPVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFNAPSLQRDPAKKGAIVRMLERGPAFRARSFLWPPGTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCAVAGDAGDACAAGDAGGGEISAAGAAA-AGGGCADGDXXXXXXXEGGDDDGAADVNSLPGRTSKTPLGVRIYRAKSE-AFLV 1691
MARSAT AA+LL +RQRNEAGVE+ LAAG S+DGSSE DWRP++AAAAS KV MAE LI + A++DLGSL+DLRCSDGLEVLGKGVRALHVAINHY++DVFR+LL+AGA+PDSANGKGLTPLMLTCILED RG +RA+MARE KTALGFAAAR Q +LIDILL +APTTLNRATPDGLTPLYAAAMSGK +AV+HLL AGA+QPPASAEKDMCPLVAAVRENH++VV+VLL+D+GM+AIGG++ IPRAVGAAA+ARKGRA IV+MLL AEG ER+ HWARC +KEDPVLH AVSFGNISA RVLLAAGADETAEN +GR AREV+GFNAPSLQRDPAKKGAIVRMLERGPA+RARS+ WP T A XXXXXXX V G +GDACA G E A A G CA+GD G D D+ + G S PLGVRIYR K AFLV
Sbjct: 101 MARSATKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWP-ATARAYTAGHTCAAAATTAAPGXXXXXXXSSNDVCGSGFV----GGSGDACAVARPRGHEPGDGCAVREADGACANGDDCGG----GASVDNGTDLPAAHGGGSSAPLGVRIYRPKKRNAFLV 594
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 229 bits (584), Expect = 8.590e-66 Identity = 159/379 (41.95%), Postives = 223/379 (58.84%), Query Frame = 3
Query: 228 LLQSVRQRNEAGVEKALAAGCSIDGS--SEQDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYH---LDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAP-TTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAI-PRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWARC-CFKEDPVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFNAPSLQRDPAKKGAIVRMLERGPAFRARSFLWPPGTGA 1340
LL V+ N+ GVE+ LAAG SIDGS S +++ P++ AAA G M +FL+ KGA+++ + G RA+HVA++ + LD R L++AGA+ + N +G TPLM+ C ++ GAER +ARELLKAG D L D G+ AL +AA LI LL + +TLN AT DG TPL A V+ LL AGA Q CP +A + ++++L S++GM A+GG A+ P ++ A A R+G+A I+++LL AEG+ERQ HWAR P+++ A ++G ++ +VLLAAGADET + +G A EVIG PS DP + AI R L+RGPA+RARS+ WP G A
Sbjct: 9 LLVEVQNGNKRGVERYLAAGASIDGSPHSGEEFPPVVFAAAVGSASMIKFLVDKGADINSSTWRP-------GAFPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDK--EGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSL--ACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAWPVGEDA 376
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 224 bits (570), Expect = 6.940e-64 Identity = 143/368 (38.86%), Postives = 215/368 (58.42%), Query Frame = 3
Query: 225 RLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAIPRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWARCCFKEDPVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFNA-PSLQRDPAKKGAIVRMLERGPAFRARSFLWP 1325
RLL V + N +GV+K LA G ++DGS E ++ P++ AA +G M + LI+KGA+L+ + G RA+H AI+ + VLLEAGA+ +S +G G TPLMLT L D G A++AREL K GA P + + G +A+ AA ++++ ++L P+ LN G TP+ AA+ G+ AV HLL AGA ++ ++ A H ++V+++L + G+ +GG AIP ++G A R+ + I++ML+ AEGEE +R WA C ++ LH A ++ ++ A VLL+AGA ET N G+ A E +G P +R P K+ A+VRML+RGPA+RARS+ WP
Sbjct: 10 RLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGADLETEAR-----------FPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTA-LADTG-----ALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAILWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAK--ILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWP 355
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 191 bits (484), Expect = 7.480e-51 Identity = 124/328 (37.80%), Postives = 186/328 (56.71%), Query Frame = 3
Query: 345 SGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAIPRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWARCCFKEDPVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFN-APSLQRDPAKKGAIVRMLERGPAFRARSFLWP 1325
+G M + LI+KGANL+ + G RA+H AI+ + VLLEAGA+ +S +G G TPLMLT L D G A++AREL K GA P + + G +A+ AA ++++ ++L P+ LN G TP+ AA+ G+ AV HLL AGA ++ + A H ++V+++L + G+ +GG AIP ++G A R+ + I++ML+ AEGE+ +R WA C ++ LH A ++ ++ VLL+AGA ET N G+ A E +G P +R P K+ A+VRML+RGPA+RARS+ WP
Sbjct: 105 NGNTAMLKLLISKGANLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTA-LADTG-----ALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAK--ILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWP 410
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 179 bits (454), Expect = 6.520e-47 Identity = 141/372 (37.90%), Postives = 202/372 (54.30%), Query Frame = 3
Query: 225 RLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPLLAAAASGKVRMAEFLIAKGANLD-LGSLDDLRCSDGLE---VLGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGK-TALGFAAARSQIDLIDILLLQAPTTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAIPRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWARCCFKED-PVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFNAPSLQRDPAKKGAIVRMLERGPAFRARSFLW 1322
RLL V + + G + L AG + DG+SE PL AA G++ + + LI GA+LD SLD + +DG G LH A+ +LD R+LL AGA+P+ A+GKG TPLM+TC+ R + A TAL AA + DL+ +LL +AP+T+N G+T L AA G + AV+ LL AGA+ P+ + L+ AV H +VV+VLL D+G++A+GG A+ A+ + R R I+QMLL EGE+++ WAR + P LH A + ++ AA +LL AGADE N + A +G P+ +++P A+ R+LERGPAFRARS+ W
Sbjct: 9 RLLHHVEKGSLQGAIEMLKAGANADGTSEAATSPLFLAANRGRIDILKLLIDNGADLDGTSSLD--KFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYF--RAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLL-DRGVQAVGGELAMSYALRRSILKRFPR--ILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAW 373
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE) HSP 1 Score: 165 bits (417), Expect = 9.630e-42 Identity = 134/380 (35.26%), Postives = 208/380 (54.74%), Query Frame = 3
Query: 225 RLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNRATPDGL-----TPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCP--LVAAVRENHRKVVKVLLSDQGMRAIGGSEAI-PRAVGAAAAARKGRAGIVQMLL-LAEGEERQRHWARCCFKEDPVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFNAPSLQRDPA---KKGAIVRMLERGPAFRARSFLWPP 1328
RLL+ ++ + V+ A+AAG GSS RPL+ A+ SG V + FL+ GA ++ + D D LG +RA H A+ LD VLL+AGA D+ N +G T LM C+ + MA+ LL AGADP + D +G+ AL AAA+ ++ID+LL ++L++ + TPL +A S + +AVAHLL GA+ A+ +++ L AV +N +V+VL + G+ ++GG+ + P ++ A+AA+ GR ++++LL + G+ +WA P+L+ A + + VLLAAGADE ++E + A ++IG S + + K AI R L RGPA+RARS+ WPP
Sbjct: 9 RLLRGAQKGDLPAVQAAIAAGADPSGSSNSRLRPLMVASGSGSVEVVNFLLQNGAEMEHQTWGD----DDHRFLG--MRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACMTD--ASPPTCVAMAKALLDAGADPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGAR---ATVDREGRGNLLRRAVVKNSEPIVRVLF-EAGLESVGGAARVMPDSL--ASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYVWGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDLLASGSKSASFRSDKAAIRRTLLRGPAYRARSWTWPP 374
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.300e-27 Identity = 120/396 (30.30%), Postives = 177/396 (44.70%), Query Frame = 3
Query: 264 VEKALAAGCSIDGSSEQDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGK-------GVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGA--ERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAIPRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWAR---CCFKED------------------------PVLHCAVSFGNISAARVLLAAGADETAENNEGRWAREVIGFNAPSLQRDPAKKGAIVRMLERGPAFRARSFLWPPGTGAA 1343
V + LAAG S+ S E++ P+ AAA G V + + L+ GA ++ ++ SDG G ALH+A + VLL+ GANP+S++ +G+TP+M+ C R + +A M LLKAGAD L D G A+ FAA+ + ++++LL +AP+TLN AT G TPL AA G A+GG AI A+ + + G ++ +LL EG+E+Q WA C E P+LH A + I A RVLL+AGA + +G+ A + IG +R+ + + A+ +L +GPAFRARS+ WP AA
Sbjct: 23 VTRMLAAGASLRASREENIHPMAVAAAHGHVHIIKALVRSGAEIEATCTSRVK-SDGYCCETNPNWPYLNGFTALHIAAILGKVRAMLVLLQLGANPNSSDTRGVTPVMMACQGVRCCRPSTPNQAEMLNSLLKAGADVELEDGTGLLAIHFAASHCETQVVELLLSKAPSTLNHATHKGFTPL-AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGFEAVGGKPAIADAM--RTSVQYGHIDMLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAIGVY--HHERNGSVEAAVRALLLKGPAFRARSWAWPATMNAA 412
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI) HSP 1 Score: 103 bits (257), Expect = 1.270e-20 Identity = 103/326 (31.60%), Postives = 151/326 (46.32%), Query Frame = 3
Query: 285 GCSIDGSSEQDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEV------LGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGA---ERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNRATPDGLTPLYAAAMSGKDEAVAHLLKAGAQQPPASAEKDMCPLVAAVRENHRKVVKVLLSDQGMRAIGGSEAIPRAVGAAAAARKGRAGIVQMLLLAEGEERQRHWARCCF---KED------------------PVLHCAVSFGNISAARVLLAAGA 1172
G S+ + RP+ A G + + + L+A GA+ + D DG G AL++A + VLL+ GANP++ + G TP+M+TC G G+ + M R LLKAGAD A+ + G A+ AA R ++ +LL AP+TLN AT +GLTPL AAA G + ++ L GA A + L AV V+ LL + G+ A+GG I A+ + G ++MLL GE++Q WA+ ++D P+LH A +I A VLL+AGA
Sbjct: 5 GASVHDFGDAVVRPIAVATDYGLIDIIKALVATGADTEAPCWSD---KDGAWKGNPEWSYRNGFTALYIAPAVGNAGALLVLLQLGANPNATDSDGGTPIMVTC-----GTGSVTSTKLTMMRSLLKAGADLAVENELGGLAIHIAAGRCDAQVVALLLSMAPSTLNNATHNGLTPLAAAAEKGNESTMSLLFSEGASDSLPWATTGITALHKAVIVGMGTSVRFLL-ENGLDAVGGLPGIAEAI--RISVWFGCIDGLEMLLNVHGEKKQEFWAKHYVFGVQDDSLLGSVPFSITAILCEWYPILHYAAKHYSIPALHVLLSAGA 319
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Match: A0A6H5JDE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE9_9PHAE) HSP 1 Score: 84.0 bits (206), Expect = 7.090e-15 Identity = 77/217 (35.48%), Postives = 103/217 (47.47%), Query Frame = 3
Query: 207 ATPDAARLLQSVRQRNEAGVEKALA-AGCSIDGSSE--QDWRPLLAAAASGKVRMAEFLIAKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRVLLEAGANPDSANGKGLTPLMLTCILEDPGRGAERAIMARELLKAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPTTLNR-ATPDGLTPLYAAAMSGKDEAVAHLLKAG 845
AT + A+LL V + GV+K L AG S++G+ +D L+ G +R+AEFLIA+GANL+ L+D+ G + KG RALH++ + ++ VLL+AGA PD+ + G TPLMLT GK L FA ID LL AP LN A +TPLY AAM G + H K G
Sbjct: 11 ATFNDAQLLHKVVNGDLLGVKKELVNAGVSVNGNPRLLRDIT-LILTTVKGHIRIAEFLIARGANLESACLEDVVNEIGEMSVRKGTRALHLSSSP---EITSVLLKAGACPDATDADGCTPLMLTTK-----------------------------DGKMTLHFAVGAGNIDAASCLLDAAPEKLNHPALECHITPLYFAAMGGPGQTKVHSTKVG 194 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16590.1 >prot_C-linearis_contig9.16590.1 ID=prot_C-linearis_contig9.16590.1|Name=mRNA_C-linearis_contig9.16590.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=505bp MARSATPDAARLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPLLAAAAback to top mRNA from alignment at C-linearis_contig9:1647440..1649199+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16590.1 ID=mRNA_C-linearis_contig9.16590.1|Name=mRNA_C-linearis_contig9.16590.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1760bp|location=Sequence derived from alignment at C-linearis_contig9:1647440..1649199+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:1647440..1649199+ >mRNA_C-linearis_contig9.16590.1 ID=mRNA_C-linearis_contig9.16590.1|Name=mRNA_C-linearis_contig9.16590.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3030bp|location=Sequence derived from alignment at C-linearis_contig9:1647440..1649199+ (Chordaria linearis ClinC8C monoicous)back to top |