mRNA_C-linearis_contig9.16560.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16560.1
Unique NamemRNA_C-linearis_contig9.16560.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A6H5L2A1_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A1_9PHAE)

HSP 1 Score: 602 bits (1551), Expect = 7.210e-204
Identity = 285/343 (83.09%), Postives = 321/343 (93.59%), Query Frame = 2
Query:   44 DEGHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWDDREVTLDSGDVIRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPRTRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKSTGMGDLLKSLLTLEPKARATATEALRHRFFAEGL 1072
            DEGHYKGKKGD +G RY+++GDVGLGTFGRVVECW +KR R+VAVKVVRKV+KYHESALIEAQIL+DVN+RER++RR++ D+SLCVEMF Q EHQGHCCLVFECLGRSLYDYLKKNDYRGFP+DVLR I+RELLQA+EFLHS+KLIHTDLKPENVLLKSW+DR VTL+SGDVIRVPVNP IKVIDFGGATYE+DSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATH+NLEHLALMEKCVG FPP+ML KAPR+RDFF+ ++G+C+GA +CD+ENRRHIRRMKRL++IT  V+ TGMGDLL  LLTL+PK RATATEAL HRFF +GL
Sbjct:  406 DEGHYKGKKGDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRRVAVKVVRKVAKYHESALIEAQILRDVNLRERSTRRNTIDTSLCVEMFAQFEHQGHCCLVFECLGRSLYDYLKKNDYRGFPIDVLRSISRELLQAVEFLHSIKLIHTDLKPENVLLKSWEDRSVTLESGDVIRVPVNPRIKVIDFGGATYEHDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHHNLEHLALMEKCVGLFPPNMLLKAPRSRDFFDLTSGLCKGATECDSENRRHIRRMKRLEDITESVEDTGMGDLLDKLLTLDPKRRATATEALSHRFFDDGL 748          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: D7FR38_ECTSI (AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR38_ECTSI)

HSP 1 Score: 561 bits (1445), Expect = 5.480e-194
Identity = 271/339 (79.94%), Postives = 307/339 (90.56%), Query Frame = 2
Query:   56 YKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWDDREVTLDSGDVIRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPRTRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKSTGMGDLLKSLLTLEPKARATATEALRHRFFAEGL 1072
            ++GKKGD +G RY+++GDVGLGTFGRVVECW +KR R VAVKVVRKV+KYHESALIEAQIL+DVN RER++RR++ D+SLCVEMF Q EHQ       ECLGRSLYD+LKKNDYRGFP+DVLR I+RELLQA+EFLHS+KLIHTDLKPENVLLKSW+DR VTL+SGDVIRVPVNP IKVIDFGGATYE+DSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATH+NLEHLALMEKCVG FPP+ML KAPR+RDFF+ ++G+C+GA +CD+ENRRHIRRMKRL +IT  V+ TGMGDLL  LLTL+PK RATATEAL HRFF +GL
Sbjct:    8 WQGKKGDRLGGRYEIIGDVGLGTFGRVVECWCLKRHRHVAVKVVRKVAKYHESALIEAQILRDVNFRERSTRRNTIDTSLCVEMFAQFEHQ-----CSECLGRSLYDFLKKNDYRGFPIDVLRSISRELLQAVEFLHSIKLIHTDLKPENVLLKSWEDRSVTLESGDVIRVPVNPRIKVIDFGGATYEHDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHHNLEHLALMEKCVGLFPPNMLLKAPRSRDFFDLTSGLCKGATECDSENRRHIRRMKRLGDITESVEDTGMGDLLDKLLTLDPKRRATATEALSHRFFDDGL 341          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A835Z1U5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1U5_9STRA)

HSP 1 Score: 392 bits (1008), Expect = 1.800e-125
Identity = 196/344 (56.98%), Postives = 251/344 (72.97%), Query Frame = 2
Query:   41 DDEGHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWD---DREVTLDSGDVIRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPRTRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKSTGMGDLLKSLLTLEPKARATATEALRHRFFA 1063
            DDEGHY+G+ G ++G+ Y+V  DVG GTFGRVV CWD + RR VAVKVVR+V +YHESALIEA IL+DVN      R   A ++LCV + +Q + +GHCCLVFE +G SLYD LK+NDYRGFP+  +R  AR+LL+A+ FLHSM L+HTDLKPENVLL   +   +R    D  D + +PV+  IKVIDFGGATY  D  ++ VNTRQYRAPEVILG+ W  PSDLWS GCI+AEL+ G+LLFATH+N+EHLALME+CVG FP  M+  +P    +F+ S GV R    C  ++R HIRRM  ++E+ A  + +G+G LL+ +L L+P  R  A++ALRHRFFA
Sbjct:  171 DDEGHYEGQSGSVLGDGYEVQEDVGTGTFGRVVACWDRRGRRTVAVKVVRRVKRYHESALIEADILRDVN------RAGGAGAALCVRLLDQFDARGHCCLVFERMGPSLYDVLKRNDYRGFPLRYVRDFARQLLEAVAFLHSMGLVHTDLKPENVLLCDLELEPERGRYKDDQDALMLPVSTRIKVIDFGGATYVDDHKSATVNTRQYRAPEVILGVGWCRPSDLWSCGCIVAELYQGELLFATHDNMEHLALMERCVGPFPRHMVRASPVGAKYFD-SRGVSRWRRACPEDSRAHIRRMPTIEELVAQDEPSGLGGLLEGILELDPDKRLRASDALRHRFFA 507          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: H3G737_PHYRM (Protein kinase domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3G737_PHYRM)

HSP 1 Score: 342 bits (878), Expect = 1.890e-108
Identity = 180/353 (50.99%), Postives = 240/353 (67.99%), Query Frame = 2
Query:   41 DDEGHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWDDREVTLDSGDV---------IRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPR---TRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKS-TGMGDLLKSLLTLEPKARATATEALRHRFF 1060
            D  G Y GK G+ I NRYK++ + GLGTFGRV+EC D +R   VA+KVVRKV KY ESA IEA ILQDVN +++N+       SLCV MF   E++GH C+VFE LG SLYDYLK +DY+ FP+  +R  A +LL ++EF+HS++LIHTDLKPEN+LL   ++     DS            +R P N  +K+IDFGGATYE +S +S++NTRQYR+PEVILGL W YPSD+WS GCIIAEL+LG+LLFATH NLEHLAL+E+C+G  P  M  +A +   +  FF          +  + E+  H+RRM+ L ++ +P  + +G+ +LL+ +L L+P+ R TA EAL   FF
Sbjct:    2 DTVGSYAGKPGEYIANRYKIIREAGLGTFGRVLECLDKQRNIVVAIKVVRKVDKYTESAKIEAAILQDVNDKDKNNE------SLCVRMFKWFEYKGHVCMVFERLGCSLYDYLKNHDYKPFPLHCIRAYAWQLLTSLEFIHSIRLIHTDLKPENILLVEDEEERPACDSSSPSSTSSGRLSLRPPANNAVKLIDFGGATYEDESKSSIINTRQYRSPEVILGLGWSYPSDIWSAGCIIAELYLGELLFATHENLEHLALIERCIGPLPVKMAAQASKHSASSKFFHRGRLNWPDGSSGE-ESVDHVRRMRSLADLLSPEDAQSGLLELLQLMLVLDPENRVTAKEALNTPFF 347          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A4D9CUL9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUL9_9STRA)

HSP 1 Score: 353 bits (906), Expect = 6.580e-108
Identity = 185/345 (53.62%), Postives = 242/345 (70.14%), Query Frame = 2
Query:   50 GHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPM-DVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWDDREVTLDSGD-VIRVPVNPHIKVIDFGGATYEYDSHAS-VVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDK----APRTRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKSTGMGDLLKSLLTLEPKARATATEALRHRFFA 1063
            GHY+G++GDMI  RY+VLGDVG+GTFGRVV+C D KR R+VAVKVVR + +Y ESAL+EA IL  VN             S CV++F     Q HCCLVFE LG SLYD++K +DY+ +P+   +R  AR+LL+A+EFL  ++L+HTDLKPENVLL      E T + G     VP +  +KVIDFGGAT++ D+  S ++NTRQYRAPEVIL + W YPSDLWSVGCIIAEL+ GD+LFATHNN EHLALME+C+G FP  ML++    AP+  D   +  G  R   D DAE++RH+RRM  L E+    K +G+ ++++ LL ++P+ R TAT+AL+  FFA
Sbjct:  380 GHYEGREGDMIRGRYEVLGDVGMGTFGRVVQCLDRKRGREVAVKVVRSIPRYTESALVEADILGAVN------EAGGRGLSHCVQLFRDFVFQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTG--EATQEKGGRPFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPWLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFA 716          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A2D4BTH7_PYTIN (Serine/threonine protein kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTH7_PYTIN)

HSP 1 Score: 343 bits (880), Expect = 1.640e-107
Identity = 191/385 (49.61%), Postives = 247/385 (64.16%), Query Frame = 2
Query:   23 DHSGGPDDE-GHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWDDRE-----------------------------------VTLDSGDVI-RVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDK-APRTRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKS-TGMGDLLKSLLTLEPKARATATEALRHRFF 1060
            D S G DD  G Y+GK G+ I  RYK+L + GLGTFGRV+EC D +R   VA+KVVRKV KY ESA IEA ILQDVN ++  +       SLCV MF   E++GH C+VFE LG SLYDYLK +DY+ FP+  +R  A +LL A+EF+HS+KLIHTDLKPEN+LL   D+                                       LD+G +  R P N  +K+IDFGGATY+ +S +S++NTRQYR+PEVILGL W +PSD+WS GCIIAEL++G+LLFATH+NLEHLAL+E+C+G  P  M+++ AP    FF          A  + E+  H+RRM+ L +I  P  + TG+ DLL+ +L L+P+ R TA EAL HRFF
Sbjct:   52 DDSAGHDDTVGSYEGKPGEYIAARYKILREAGLGTFGRVLECLDKQRDVVVAIKVVRKVEKYTESAKIEANILQDVNDKDERNE------SLCVRMFKWFEYKGHVCMVFERLGCSLYDYLKSHDYQPFPLYCVRAFAWQLLTALEFIHSIKLIHTDLKPENILLVEDDEERSGFSXXXXXXXXXXSPTAKPPATTRANGRPVDVAMAELDAGRLTCRPPANIAVKLIDFGGATYDDESKSSIINTRQYRSPEVILGLGWSFPSDIWSAGCIIAELYIGELLFATHDNLEHLALIERCIGPLPQHMVERSAPHAERFFRRHRLDWPAGAQ-NEESVEHVRRMRSLRQILRPEDAATGLLDLLQLMLVLDPENRITAKEALNHRFF 429          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A2P4Y3X6_9STRA (CMGC/CLK protein kinase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3X6_9STRA)

HSP 1 Score: 332 bits (852), Expect = 4.690e-104
Identity = 181/376 (48.14%), Postives = 240/376 (63.83%), Query Frame = 2
Query:   62 GKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWDDREVTLDSG----------------------------------DV------IRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPR--TRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKS-TGMGDLLKSLLTLEPKARATATEALRHRFF 1060
            GK G+ I NRYK++ + GLGTFGRV+EC D +R   VA+KVVRKV KY ESA IEA ILQDVN +++N+       SLCV MF  LE++GH C+VFE LG SLYDYLK +DY+ FP+  +R  A +LL ++EF+HS++LIHTDLKPEN+LL   ++  +  DS                                   DV      +R P N  +K+IDFGGATYE +S +S++NTRQYR+PEVILGL W YPSD+WS GCIIAEL+LG+LLFATH N+EHLAL+EKC+G  P  M  +A +  T   F     +   A   + E+  H+RRM+ L ++ +P  + +G+ +LL+ +L L+P  R TA EAL   FF
Sbjct:    2 GKPGEYIANRYKIIREAGLGTFGRVLECLDKQRNIVVAIKVVRKVDKYTESAKIEAAILQDVNDKDKNNE------SLCVRMFKWLEYKGHVCMVFERLGCSLYDYLKNHDYKPFPLHCIRAYAWQLLTSLEFIHSIRLIHTDLKPENILLVDDEEERLLCDSSSPSSTSSYGSPDGSSGREQWSNGRQWKKRGRGMSDVDSGRLSLRPPANNAVKLIDFGGATYEDESKSSIINTRQYRSPEVILGLGWSYPSDIWSAGCIIAELYLGELLFATHENMEHLALIEKCIGPLPVKMAARASKNSTSSKFFHRGRLNWPAGSSNDESVDHVRRMRSLADLISPEDAQSGLLELLQLMLVLDPDNRVTAKEALNTPFF 371          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A329S7G9_9STRA (Protein kinase domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329S7G9_9STRA)

HSP 1 Score: 337 bits (864), Expect = 1.080e-103
Identity = 181/384 (47.14%), Postives = 243/384 (63.28%), Query Frame = 2
Query:   41 DDEGHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLL------------------------------------KSWDDREVTLDSGDV----IRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPR---TRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKS-TGMGDLLKSLLTLEPKARATATEALRHRFF 1060
            D  G Y GK G+ I NRYK++ + GLGTFGRV+EC D +R   VA+KVVR+V KY ESA IEA ILQDVN +++N+       SLCV MF   E++GH C+VFE LG SLYDYLK +DY+ FP+  +R  A +LL ++EF+HS++LIHTDLKPEN+LL                                    + W  RE  +   D     +R P N  +K+IDFGGATYE +S +S++NTRQYR+PEVILGL W YPSD+WS GCIIAEL+LG+LLFATH N+EHLAL+E+C+   P  M  +A +   +  FF          A  D E+  H+RRM++L+++ +P  + +G+ +LL+ +L L+P+ R TA EAL   FF
Sbjct:  161 DTVGSYAGKPGEYIANRYKIIREAGLGTFGRVLECLDKQRNIVVAIKVVRQVEKYTESAKIEAAILQDVNDKDKNNE------SLCVRMFKWFEYKGHVCMVFERLGCSLYDYLKSHDYKPFPLHCIRAYAWQLLTSLEFIHSIRLIHTDLKPENILLVDDEEERLSCDSSSPSSTSSFGSPDGSSGREQWSNGRQWKKRERAMSDADAGRLSLRPPANNAVKLIDFGGATYEDESKSSIINTRQYRSPEVILGLGWSYPSDIWSAGCIIAELYLGELLFATHENMEHLALIERCLNPLPVKMAARASKNSASAKFFHRGRLNWPAGASSD-ESVDHVRRMRKLEDLISPEDAQSGLLELLQLMLVLDPENRVTAKEALNSPFF 537          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A7S1BLV6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLV6_9STRA)

HSP 1 Score: 330 bits (846), Expect = 1.210e-103
Identity = 174/340 (51.18%), Postives = 225/340 (66.18%), Query Frame = 2
Query:   41 DDEGHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWDDREVTLDSGDVIRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPRTRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVK-STGMGDLLKSLLTLEPKARATATEALRHRF 1057
            D  GH++G  G ++  RY+VL DVG+GTFGRVVEC D +    VA+K+VR V +YHESA IEA IL+DVN       R      LCV MF     +GH CLVFE LGRSLYD+LK++DYR FP+  ++  A +LL A++FLH   LIHTDLKPEN+LL +  +      +G V   P +  IKVIDFGGATY+ +  +S+VNTRQYRAPEVIL L W  PSDLWS GCI+AEL+ G+LLFATH+N+EHLALME+ +G FP  MLD+A        ++ G  R       ++R H+R+M  L+E  A     +G+ DLL+ LL ++P  RA A  ALR +F
Sbjct:   22 DTVGHFRGGLGSLVTERYEVLRDVGMGTFGRVVECVDRRYDDTVAIKIVRDVRRYHESAKIEADILRDVN------GRGGRGVGLCVRMFRSFNFKGHYCLVFESLGRSLYDFLKRHDYRPFPLYCVKDFASQLLDALDFLHGFHLIHTDLKPENILLTTNKEVSYKNVNGVVEIAPASTKIKVIDFGGATYDNEKKSSIVNTRQYRAPEVILDLGWSMPSDLWSAGCILAELYGGELLFATHDNVEHLALMERLLGAFPGVMLDRASEMARRCFDARGRHRWERMLGEDSREHVRQMPCLEECVAKEDVGSGLADLLRLLLEIDPCRRANAKTALRSKF 355          
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Match: A0A662WSC8_9STRA (Protein kinase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSC8_9STRA)

HSP 1 Score: 337 bits (863), Expect = 2.400e-103
Identity = 184/383 (48.04%), Postives = 240/383 (62.66%), Query Frame = 2
Query:   41 DDEGHYKGKKGDMIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIEAQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYDYLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLL------------------------------------KSWDDREVTLDSGDV-----IRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVILGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPSMLDKAPR-TRDFFEESTGVCRGAADCDAENRRHIRRMKRLDE-ITAPVKSTGMGDLLKSLLTLEPKARATATEALRHRFF 1060
            D  G Y GK GD I NRYK++ + GLGTFGRV+EC D +R   VA+KVVRKV KY ESA IEA ILQDVN ++  +       SLCV M+   E+ GH C+VFE LG SLYDYLK +DY+ FP+  +R  A +LL ++EF+HS+KLIHTDLKPEN+LL                                    + W  R   +   D      +R P N  +K+IDFGGATYE +S +S++NTRQYR+PEVILGL W YPSD+WS GCIIAEL+LG+LLFATH N+EHLAL+E+C+G  P  M+ +AP+ +  FF         +A  D E+  H+R M+ L + I+A    +G+ DLL+ +L L+P+ R TA EAL + FF
Sbjct:  178 DTVGSYGGKPGDYIANRYKIIREAGLGTFGRVLECLDKQRNLVVAIKVVRKVDKYSESAKIEAAILQDVNDKDVRNE------SLCVRMYKWFEYHGHVCMVFERLGGSLYDYLKNHDYKPFPLHCIRAYAWQLLTSLEFIHSIKLIHTDLKPENILLVDDTEERVSCESSSPSSSSSYGSPNGSSGREQWSNGRQWKKRGRGMSDADTPGRLSLRPPANNAVKLIDFGGATYEDESKSSIINTRQYRSPEVILGLGWSYPSDIWSAGCIIAELYLGELLFATHENMEHLALIERCIGPLPSGMVAEAPKHSSKFFRRGRLDWPASASSD-ESVDHVRSMRTLAQLISAEDAQSGLLDLLQLMLVLDPQNRVTAKEALNNPFF 553          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16560.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2A1_9PHAE7.210e-20483.09Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FR38_ECTSI5.480e-19479.94AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) kinas... [more]
A0A835Z1U5_9STRA1.800e-12556.98Kinase-like domain-containing protein n=1 Tax=Trib... [more]
H3G737_PHYRM1.890e-10850.99Protein kinase domain-containing protein n=4 Tax=P... [more]
A0A4D9CUL9_9STRA6.580e-10853.62Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A2D4BTH7_PYTIN1.640e-10749.61Serine/threonine protein kinase n=1 Tax=Pythium in... [more]
A0A2P4Y3X6_9STRA4.690e-10448.14CMGC/CLK protein kinase (Fragment) n=1 Tax=Phytoph... [more]
A0A329S7G9_9STRA1.080e-10347.14Protein kinase domain-containing protein n=11 Tax=... [more]
A0A7S1BLV6_9STRA1.210e-10351.18Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A662WSC8_9STRA2.400e-10348.04Protein kinase domain-containing protein n=1 Tax=N... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:1369169..1375329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.6
Seed ortholog evalue3.4e-90
Seed eggNOG ortholog164328.Phyra49306
KEGG koko:K00924,ko:K08287,ko:K08823
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005856,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010468,GO:0016301,GO:0016310,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031974,GO:0031981,GO:0036211,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043484,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045111,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564
EggNOG free text desc.Protein tyrosine kinase
EggNOG OGs3Q7K6@4776,KOG0667@1,KOG0671@2759
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-09_003630.1
EC2.7.12.1
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03041
Exons8
Model size2153
Cds size999
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16560.1prot_C-linearis_contig9.16560.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 1369587..1374251 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930732.7737854-UTR-C-linearis_contig9:1369168..13692291622930732.7737854-UTR-C-linearis_contig9:1369168..1369229Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1369169..1369229 +
1690881220.9119358-UTR-C-linearis_contig9:1369168..13692291690881220.9119358-UTR-C-linearis_contig9:1369168..1369229Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1369169..1369229 +
1622930732.7850242-UTR-C-linearis_contig9:1369571..13695861622930732.7850242-UTR-C-linearis_contig9:1369571..1369586Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1369572..1369586 +
1690881220.9262285-UTR-C-linearis_contig9:1369571..13695861690881220.9262285-UTR-C-linearis_contig9:1369571..1369586Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1369572..1369586 +
1622930732.8846388-UTR-C-linearis_contig9:1374251..13753291622930732.8846388-UTR-C-linearis_contig9:1374251..1375329Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1374252..1375329 +
1690881221.0075583-UTR-C-linearis_contig9:1374251..13753291690881221.0075583-UTR-C-linearis_contig9:1374251..1375329Chordaria linearis ClinC8C monoicousUTRC-linearis_contig9 1374252..1375329 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930732.7993205-CDS-C-linearis_contig9:1369586..13697031622930732.7993205-CDS-C-linearis_contig9:1369586..1369703Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1369587..1369703 +
1690881220.9353259-CDS-C-linearis_contig9:1369586..13697031690881220.9353259-CDS-C-linearis_contig9:1369586..1369703Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1369587..1369703 +
1622930732.809168-CDS-C-linearis_contig9:1370171..13703061622930732.809168-CDS-C-linearis_contig9:1370171..1370306Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1370172..1370306 +
1690881220.945198-CDS-C-linearis_contig9:1370171..13703061690881220.945198-CDS-C-linearis_contig9:1370171..1370306Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1370172..1370306 +
1622930732.8190267-CDS-C-linearis_contig9:1370695..13708151622930732.8190267-CDS-C-linearis_contig9:1370695..1370815Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1370696..1370815 +
1690881220.9554245-CDS-C-linearis_contig9:1370695..13708151690881220.9554245-CDS-C-linearis_contig9:1370695..1370815Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1370696..1370815 +
1622930732.8366044-CDS-C-linearis_contig9:1371215..13713571622930732.8366044-CDS-C-linearis_contig9:1371215..1371357Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1371216..1371357 +
1690881220.9661636-CDS-C-linearis_contig9:1371215..13713571690881220.9661636-CDS-C-linearis_contig9:1371215..1371357Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1371216..1371357 +
1622930732.8508568-CDS-C-linearis_contig9:1372325..13725011622930732.8508568-CDS-C-linearis_contig9:1372325..1372501Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1372326..1372501 +
1690881220.976643-CDS-C-linearis_contig9:1372325..13725011690881220.976643-CDS-C-linearis_contig9:1372325..1372501Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1372326..1372501 +
1622930732.86174-CDS-C-linearis_contig9:1373291..13734711622930732.86174-CDS-C-linearis_contig9:1373291..1373471Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1373292..1373471 +
1690881220.9874332-CDS-C-linearis_contig9:1373291..13734711690881220.9874332-CDS-C-linearis_contig9:1373291..1373471Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1373292..1373471 +
1622930732.8739967-CDS-C-linearis_contig9:1374122..13742511622930732.8739967-CDS-C-linearis_contig9:1374122..1374251Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1374123..1374251 +
1690881220.9972367-CDS-C-linearis_contig9:1374122..13742511690881220.9972367-CDS-C-linearis_contig9:1374122..1374251Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 1374123..1374251 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16560.1

>prot_C-linearis_contig9.16560.1 ID=prot_C-linearis_contig9.16560.1|Name=mRNA_C-linearis_contig9.16560.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=333bp
MIGNRYKVLGDVGLGTFGRVVECWDMKRRRQVAVKVVRKVSKYHESALIE
AQILQDVNVRERNSRRSSADSSLCVEMFNQLEHQGHCCLVFECLGRSLYD
YLKKNDYRGFPMDVLRPIARELLQAIEFLHSMKLIHTDLKPENVLLKSWD
DREVTLDSGDVIRVPVNPHIKVIDFGGATYEYDSHASVVNTRQYRAPEVI
LGLRWLYPSDLWSVGCIIAELFLGDLLFATHNNLEHLALMEKCVGTFPPS
MLDKAPRTRDFFEESTGVCRGAADCDAENRRHIRRMKRLDEITAPVKSTG
MGDLLKSLLTLEPKARATATEALRHRFFAEGL*
back to top

mRNA from alignment at C-linearis_contig9:1369169..1375329+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16560.1 ID=mRNA_C-linearis_contig9.16560.1|Name=mRNA_C-linearis_contig9.16560.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6161bp|location=Sequence derived from alignment at C-linearis_contig9:1369169..1375329+ (Chordaria linearis ClinC8C monoicous)
CGGAGGGGACTCCGGGGGGGGGGACCACAGCGGGGGCCCCGACGACGAGG GCCACTACAAGGTGGGATGTGTGACGTGTGACGATTGACGAACATACATG AGTCGTTTATTCGGAAGGGTGGGGTGGGGGAGACTCCACCCTGTAACGTT CGGCCGTTTTCGATTGTTTGCACTTAAAAGCGTCAGCGGTCTTGTATGTA CGTTCAACCCGTGAAAAATCGTCCCAGGAGGACCCGTTGTAGACGACACT AGCCCTCCCTCAAGCTTGTCCCAGCGTGGGTTTTGTCATCTTGGTGCTTT GTAACTTTACTTCCCATGCTCGCATGGGTACGATGTATGCATATGAAACC CAACGAACTCGCCGTCTGTTTCTCGCTCTTGTCTTTCTTTCACCGTAATT TAGGGCAAGAAAGGCGACATGATCGGGAACCGGTACAAGGTGCTCGGTGA CGTTGGTCTCGGCACGTTCGGCCGCGTGGTGGAGTGCTGGGACATGAAAC GGCGCCGCCAGGTTGCCGTCAAGGTCGTCCGAAAGGTACGAACGAAATAC ATTGAATCGTTGCGCCTTTTAAAAAGACCAACCAGTGCGTACGTTTTCCA CCCACCCGTCAACCCACCCACACGCAGCGAGCGCTCTTCCTCGCGTCGTT CGACATCTGACAAAAAAAAACAACCATGGGAGGCAAGAACGCATTGCTCT CTTGCTACGTACACACCTCGCAGGAGGCATCCTTTTTCGCGCCACACGCA CGATAACCCCCCTCGCTTCTGTTACAATTGTTTTGTGTCCGGTGCCTCGT GAGTCTCGGACTCCACGACTACTTCGATACGCGCCTAACCGTCTGTCGTA CGGACAAGCGGGCCGCCTTTTACCGCCCTGCTTCCGAAATACAACGACCA ATGTAAATGTATGTATGCGGGTTATCCGACGAACGTGAGCGAACCCCCAC GTGGTGTGACGTCGATGCTCGCCTGCTTGGTTCGGGCGCACGCGCGCCTA CAGGTGTCCAAGTACCACGAGTCCGCTCTGATCGAGGCGCAGATTCTGCA AGACGTGAACGTGCGCGAAAGAAACTCCCGGCGTAGCTCGGCCGACTCTT CGCTGTGCGTCGAGATGTTCAACCAGCTGGAGCACCAGGTGTAACCCATG GCACCTCTTGTGTACTGGTATTGCTTGCTGCGTGGTGCCACGCCGTTTTG TTTGTGTGTTGCTCGCCGCGTCTGACGTGTGGCTGCTGTGTTGCGGACAT CTGTGGCCGGGTGACTTAACTTCTGCTTGGTTTTGGGAACTGACGCTTGC GGTGACCATCTGACGACGAGTTTAAGGGATCCCGTTACCCTTATTCTGCT TGCTGCAATCTAAACGCCCGGCGTGTTGTGTTGGTGTTTTCTTTCCTGTT CCTTTTGCCCGATTTGCGGTATGTGTCGTCTCTTTGACACAGCGTATTTG TTGATATTTGTTGGACCAGTTTGGCAGGATTGCTGTAACAGATCCCATCC GTCGTTGAATTGCTTCTCGAAATGCAGGGTCACTGCTGTTTGGTGTTCGA GTGCCTCGGACGGTCCCTGTACGACTACCTGAAGAAGAACGACTACAGGG GGTTCCCCATGGACGTTCTAAGGCCGATCGCGCGAGAGCTGCTGCAGGTG AGGCGGAGGTGATGTACTCTCAGGCTACACCGCTTCGCCTACGCTTGACG CTTGAGTGATGCCCGCTGGACCCGGAGTGTTTGGAATAAAAGCTACTGTA GCGGTAGTCGCACGTGTCGCGATCGAATATATCTGCTCGAGAAAGAAGGC GAATCTACATACTCAGCTGGAGTTGATCCCCTCTGATCTGGCTGAAGCCG ACTCCCCCCTGACCACGGCATTGAGCATCTCTTTTGGGGGGAGTTTTGGG TGCATTTTTTACGAGAACCGCGGGCAATGAACAATGGGGAGGGACTATCC GAAATCGAGACGAACGCGAGAGACAACGGCGTATGCGATTGAAACCCACC AACCCGCGACGAAACCAAACGAAATGAAACACCGAAAACTAACTCAGGCG ATCGAGTTCCTGCACTCGATGAAGCTCATTCACACCGACCTCAAGCCGGA GAACGTCTTGCTCAAGTCCTGGGACGATAGGGAGGTCACCCTAGATTCCG GCGACGTCATCCGGGTGCCTGTGAACCCCCACATCAAGGGTGAGAGACGG GAAACCACGTTTAGGGCAAAATACCGTCGACAGTATTGCAAATTTGCAGC TTTGCTGGTGAAGGTGAACAGAGGTTGCACGGTCTAAATTGTGGAGAATT TTGTTTGCACGTTTTGGCTTTAATCTGTACCGGTAAATGCTTAGTGCCCG TGGCCGTGTGCATGCACACGAGGGAAAAAGGAAGGTTTCAAGCCTGTTTT TCCCGTGATGCACCATAGTTTCAAAGGGACAAATGAGAAGCAGGGTAGGA AGAGGGTCGATGAAGATCTATCGCAAGTTTCACGACGGTCATATGAAGGG CAAAATGCCCGTCATTGATTATTTTGCTCGAGAACCGAGACCCTATTGCT GTTACAAGTGTTTTGCGTTCGTTATTTTCATTGCGAGTTTTATGTTCGTC GCGAATGCTCCCACCCGACTCTTGTCATCAAGCCTTTTCATTTTTTGAGT CGAATTGCCTTTTACACGGGGACGACCGAACCACAAACGCTCTGTTTTCT CGTCACGTCAAGAGTGAATGTCGAGAGCTTGTTGCGAACAACCCTGTTTT GATGTACGAGACCCCCCTGTCTGTCTGGGGCTTCTGATCGGTCACGGGGT CTCTGGAGATGACCCTTACGCCACCTAAATAGACGGCTGCTGCGTTTCCC CCCTCGTTTTTCTTCTATCTTCTATCTTCTATCTGCTATCTCATGTCATA TGGTACATGGCAACGTTTGGCTTGCGCCTTCCCACTCCGATTAGTTCCCG TTTCGAGTTGTAACACGTCGAGAGCACGTACCGGCAGAAAGTTCCGCTCA TCGTCTTCAGTTATGCTTGCGCCGTTTGCCGTTCGTTCTTTTTGCTTGTC TCGGGTTTTCCTCGCGCATGGCAAGTACCTAGTTTGGTGGACTTCCAGCA GTTGCTTGTTGCTGATTTCTCTCCCTTCTCGTCTCGCTGTTCTTTTGTCT GGGGCAGTGATCGATTTCGGCGGAGCGACCTACGAGTACGACTCCCACGC GTCCGTGGTGAACACGCGCCAGTACCGTGCCCCCGAGGTGATCTTGGGGC TACGCTGGCTCTACCCGTCGGATCTCTGGTCCGTGGGCTGCATCATCGCC GAGCTCTTCCTGGGAGACCTCCTCTTCGCGACGGTGCGTTTGTTTTTCGA TACTTCGAAGTATGAGTTCAGCCGCGCGTGTGATTAGGCTTTTTTTTTGT TTCAGGGGAATGGGGTCAGATTTAGCATATTGACTTCGCTCGCAAGAGTT TGTCACTGAAATGAAAGAGAGCTTCGGACGCACTACTACTGTAAGGGGCG AGCTCCCCCGTGTTCCATCGAGTATTACCTTTTGTCGCTGTGTGGGAAGA TGGCCCACCTTTCCCTGGAAAGGAGGCGACTACTTCTCAAAAGTAGCATG TGTGTGTGTGTGTGTGCGTGTGTTTTGGTCCCATTTATTTTGGCGACAGT CCCTTCCGATCAAGGCGAGACATGTACTACACGTTGCGGTGTATTTAGAG TACTACACTTGCTCAGTGTATTTTTATGTACAACTAGAACCAACCGGGGT CACACAGGAGGGGGTAAACACTGGGGCTTTTTTTCTTCTTTTTCTGTTTC TTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGATTTTATCGCGA GAAGGGTGCAGCCATCCCTTTCGCTCGTCAACGTGCTAAGTCGAAGTTTG GTACTCACGAGCTTTTTCAGCTATTTTATCGCTTTCACCTGCAAATCGCA AAATAAACACCTTTGCTTGGAATTGAACTCCAGACTTTGCTGCTAGTGGG TTCGAGGTTAAACCACTAGTCCACCGGGGCGACCGGCTAGCAGTACGAAG TATTATTTCAGCAGTTGTTGCCAAACTAACCTTACCTTACTCCTGGTTCC CGGCACCTCGACGAAACTCCCAGCACAACAACCTGGAGCACCTGGCGCTG ATGGAGAAGTGCGTGGGCACGTTCCCCCCCAGCATGCTGGACAAGGCGCC CCGCACGCGGGATTTCTTCGAGGAGTCGACGGGCGTGTGCAGGGGCGCCG CCGACTGCGACGCCGAGAATCGCCGGCACATCCGCAGGATGAAGCGCCTC GATGTAAGTACCGTGTGATTTCCATCCTGATGGATGGTGTGTTGAGAGAT ACGGATGACGGATGATGGGTGATATCGGCGAAGGACGCACGGTGTTTGTT TGGAAACAGAGTGGTGGAATGTGGTAAAAAGAGGCGTGCGCCGTTTCTCT GCGGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGAAGTCGTTGCGCTTCCTGTCAAGGCTTCTCTTGTTGG GGTGTTTTGCGCGTATCTTGTTTGTTGGCCGGCGGTTTGTTTCAGCATCG TGCGGGCGCCCGGTGAAGCTCCTTCGTGGCAAAAAAACAGCACACGCCGT GGCTCGCCCGTTTACATACCTCCACCTACCTGGTAGCCGTGTAAGGAGGA TGGTTTCTTGCGCTTAGTCCAAAGCTTGTCGCCCCTTCCTACCTGGATTG TCGATAGTCCAACACCAGCCAAACGTAATTGCGCCGTTTCTAATCGGCGA AACAAAGCTTGGAACACAAGTACCTCTTTGGAGCCCACTACAACACTTAT TTGTTTACCTTCATCACCAGGTAGTTGTTTTGGAAGCAGTATGACCCTCC AACTTCCATCTCCTCACAGCCACCCCGCCCTCCCCTTTTGCCATGCCATC CCAGGAAATCACGGCGCCGGTCAAGAGCACAGGCATGGGAGACCTGCTGA AGAGCCTGCTCACCCTGGAACCCAAGGCGCGAGCGACGGCGACCGAGGCA CTGCGCCACCGCTTCTTCGCCGAAGGCTTGTAGGAGACAGGGTTTGTGGC ACGCATATGTGATTCAAACGGCATACTTCTAAACGTCAGTTGAGGCTGTG GATCGTGCAATGGGTGTTTGCTGGAGCCCGCCATTAACACGTCGTTTTGG TTTTTGACCAGTGTGTGGACACTGAGAAGCACGGCGTGTTGGGGTTGATT TGATGCCAATAATAGGTTATGGGGCCTGCTGGTACATCCGGTTGACGGCG AAGGCCGGATCGAAGTTGCTTGGAAGGCGGGCGTGTGGTGGGGAGGCAAG TGCACAATCGCATTGGTGGTGGCGTCGATGGCGGTACAATAGTGTTAGGG TGAGGATGAGGATGAGTGGCGGGACGAAGTGCAGATGAAATAGTTAAGGT AAGGTAAAAGGGGACACACGGAACCCCTTGGTCGTATCTATCGCAAAGAA GGAAATCAACTTGATCCGACCACGGCGGCCAATAGCGGTGCTAGCAGGGG TTTGAGTCACAAAATGTATGTATTTGCACGACATGGCGAAAAGTATGTTA AAAATTGGCGCAGGAGGGCGGGGTGTGGTGATGCCACCCGGCGTAAATTA GGATTGGCGGAGGGGGCCGTGATATAATTTTTGTTTTGTCTTGTGTGCTT GTGAAGGGGCAGATGCGTGGGTCCAGGACCCAGGGAGAAGAGTCCTTGCA TGTCACCAACACTTCTCCCGAGAGAGCGGACTTGGTTCCGTCTGCCACAC AGAAGATGGTCGAAGGGGGCCAGTACCGACAGCGTGGTTTCGCTAGTCTA CTCCAAGCACACCGTCGTGAGCCATGTGTCCTTCGTCTGGCAGTGCCTGC GTGCAAGAAACTGCTTGTACCGCTCTGTAGGCTAGCTGCGCTGAGCCATT CGCTCTTCTTCCTTACTGTTGACTTGTTCCTGGTCTTGGCGTTGGTGCCA TTTGTCGACGGGGGGTTGTGCCCCTTCTTCATGGCCTCTCTGTCCTCTTT TTCAAACACAATTTTCTCTGAGCAGCACAGTCTGAAAAAACAGCATTGAG TCCAGGGCTGCGATTAGGGGCGCCAATAGCTGTGCTGGGGGTCCGGAAAA ATCCAGGGGGG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig9:1369169..1375329+

>mRNA_C-linearis_contig9.16560.1 ID=mRNA_C-linearis_contig9.16560.1|Name=mRNA_C-linearis_contig9.16560.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at C-linearis_contig9:1369169..1375329+ (Chordaria linearis ClinC8C monoicous)
ATGATCGGGAACCGGTACAAGGTGCTCGGTGACGTTGGTCTCGGCACGTT
CGGCCGCGTGGTGGAGTGCTGGGACATGAAACGGCGCCGCCAGGTTGCCG
TCAAGGTCGTCCGAAAGATGATCGGGAACCGGTACAAGGTGCTCGGTGAC
GTTGGTCTCGGCACGTTCGGCCGCGTGGTGGAGTGCTGGGACATGAAACG
GCGCCGCCAGGTTGCCGTCAAGGTCGTCCGAAAGGTGTCCAAGTACCACG
AGTCCGCTCTGATCGAGGCGCAGATTCTGCAAGACGTGAACGTGCGCGAA
AGAAACTCCCGGCGTAGCTCGGCCGACTCTTCGCTGTGCGTCGAGATGTT
CAACCAGCTGGAGCACCAGGTGTCCAAGTACCACGAGTCCGCTCTGATCG
AGGCGCAGATTCTGCAAGACGTGAACGTGCGCGAAAGAAACTCCCGGCGT
AGCTCGGCCGACTCTTCGCTGTGCGTCGAGATGTTCAACCAGCTGGAGCA
CCAGGGTCACTGCTGTTTGGTGTTCGAGTGCCTCGGACGGTCCCTGTACG
ACTACCTGAAGAAGAACGACTACAGGGGGTTCCCCATGGACGTTCTAAGG
CCGATCGCGCGAGAGCTGCTGCAGGGTCACTGCTGTTTGGTGTTCGAGTG
CCTCGGACGGTCCCTGTACGACTACCTGAAGAAGAACGACTACAGGGGGT
TCCCCATGGACGTTCTAAGGCCGATCGCGCGAGAGCTGCTGCAGGCGATC
GAGTTCCTGCACTCGATGAAGCTCATTCACACCGACCTCAAGCCGGAGAA
CGTCTTGCTCAAGTCCTGGGACGATAGGGAGGTCACCCTAGATTCCGGCG
ACGTCATCCGGGTGCCTGTGAACCCCCACATCAAGGGCGATCGAGTTCCT
GCACTCGATGAAGCTCATTCACACCGACCTCAAGCCGGAGAACGTCTTGC
TCAAGTCCTGGGACGATAGGGAGGTCACCCTAGATTCCGGCGACGTCATC
CGGGTGCCTGTGAACCCCCACATCAAGGTGATCGATTTCGGCGGAGCGAC
CTACGAGTACGACTCCCACGCGTCCGTGGTGAACACGCGCCAGTACCGTG
CCCCCGAGGTGATCTTGGGGCTACGCTGGCTCTACCCGTCGGATCTCTGG
TCCGTGGGCTGCATCATCGCCGAGCTCTTCCTGGGAGACCTCCTCTTCGC
GACGTGATCGATTTCGGCGGAGCGACCTACGAGTACGACTCCCACGCGTC
CGTGGTGAACACGCGCCAGTACCGTGCCCCCGAGGTGATCTTGGGGCTAC
GCTGGCTCTACCCGTCGGATCTCTGGTCCGTGGGCTGCATCATCGCCGAG
CTCTTCCTGGGAGACCTCCTCTTCGCGACGCACAACAACCTGGAGCACCT
GGCGCTGATGGAGAAGTGCGTGGGCACGTTCCCCCCCAGCATGCTGGACA
AGGCGCCCCGCACGCGGGATTTCTTCGAGGAGTCGACGGGCGTGTGCAGG
GGCGCCGCCGACTGCGACGCCGAGAATCGCCGGCACATCCGCAGGATGAA
GCGCCTCGATCACAACAACCTGGAGCACCTGGCGCTGATGGAGAAGTGCG
TGGGCACGTTCCCCCCCAGCATGCTGGACAAGGCGCCCCGCACGCGGGAT
TTCTTCGAGGAGTCGACGGGCGTGTGCAGGGGCGCCGCCGACTGCGACGC
CGAGAATCGCCGGCACATCCGCAGGATGAAGCGCCTCGATGAAATCACGG
CGCCGGTCAAGAGCACAGGCATGGGAGACCTGCTGAAGAGCCTGCTCACC
CTGGAACCCAAGGCGCGAGCGACGGCGACCGAGGCACTGCGCCACCGCTT
CTTCGCCGAAGGCTTGTAGGAAATCACGGCGCCGGTCAAGAGCACAGGCA
TGGGAGACCTGCTGAAGAGCCTGCTCACCCTGGAACCCAAGGCGCGAGCG
ACGGCGACCGAGGCACTGCGCCACCGCTTCTTCGCCGAAGGCTTGTAG
back to top