mRNA_C-linearis_contig9.16542.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: D7FQY0_ECTSI (Dihydroorotase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY0_ECTSI) HSP 1 Score: 658 bits (1698), Expect = 1.010e-237 Identity = 319/350 (91.14%), Postives = 333/350 (95.14%), Query Frame = 1
Query: 61 EVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQLVGEGRRPQVA 1110
E+TIP+ DDFHHHFRDGEVL DTV+HA+RMFRRAIAMPNLKPPVTTTD+AL YRQRILAC+PDG DFTPLMTLYMTDKSTPEEI KAKASGHVYAVKLYPAGATTNSDSGVTDLA VAPAMEAMAEVGMPLLIHGEVTT GVDIFDKEARFIEEVIKPLV+K+P LK+VMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKIS CGCAGIFTGHAA+ELYCEVFEGE ALDR AGFSSHHGADFYGIPRNEG LTLVKEKWTVP Y FGQTEVVPLRAGE+V WQ+VGEG+RP+ A
Sbjct: 6 EITIPRADDFHHHFRDGEVLADTVKHATRMFRRAIAMPNLKPPVTTTDEALAYRQRILACVPDGVDFTPLMTLYMTDKSTPEEILKAKASGHVYAVKLYPAGATTNSDSGVTDLANVAPAMEAMAEVGMPLLIHGEVTTAGVDIFDKEARFIEEVIKPLVQKMPNLKVVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISPCGCAGIFTGHAALELYCEVFEGEGALDRFAGFSSHHGADFYGIPRNEGALTLVKEKWTVPGSYKFGQTEVVPLRAGEDVCWQMVGEGKRPKAA 355
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A835ZAN4_9STRA (Dihydroorotase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN4_9STRA) HSP 1 Score: 514 bits (1325), Expect = 6.520e-181 Identity = 249/349 (71.35%), Postives = 284/349 (81.38%), Query Frame = 1
Query: 64 VTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQLVGEGRRPQVA 1110
+TI DDFHHHFRDG+VL+ TV HA+RMFRRAIAMPNLKPPVTTT +AL YR RILAC+P G +F PLMTLY+TD + EEI +A+ SGHV+AVKLYPAGATTNSDSGVTDLAKV P +EAMAEVGMPLL+HGEVT VDIFDKEARF+EEV+ PLV + P LK+V EHITT EA FV ++ NVAATITPQHLLYNRN IF+GG+RPHMYCLP+LKRE HRL LV AATSG+ K FLGTD+APHAR AK SACGCAGIF+GHAA+ELY EVF+ ALD F S GADFYG+PRN +TL +E W VP Y+FG +EVVPLRAGE V+WQ+ EGRRP A
Sbjct: 9 LTIAVADDFHHHFRDGDVLQHTVPHAARMFRRAIAMPNLKPPVTTTAEALAYRDRILACVPPGVEFEPLMTLYLTDHTDAEEIHQARKSGHVHAVKLYPAGATTNSDSGVTDLAKVYPVLEAMAEVGMPLLVHGEVTASHVDIFDKEARFVEEVLGPLVARFPNLKVVAEHITTKEAAEFVLSSGPNVAATITPQHLLYNRNEIFRGGVRPHMYCLPILKREEHRLALVGAATSGSAKIFLGTDSAPHARGAKESACGCAGIFSGHAALELYAEVFDAAGALDSFGAFCSQRGADFYGLPRNAATVTLAREPWRVPASYAFGASEVVPLRAGEHVAWQIADEGRRPPAA 357
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A7S2USN6_9STRA (Dihydroorotase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USN6_9STRA) HSP 1 Score: 466 bits (1200), Expect = 2.910e-161 Identity = 225/345 (65.22%), Postives = 274/345 (79.42%), Query Frame = 1
Query: 52 RMEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGA--DFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQL 1080
++++ I DD+HHH RDG+VLK+TV HAS+ F+R I MPNLKPPVTTT++A Y +RILA +P+ F PLMTLYMTD+++ EEIRKAK SG VYAVKLYPAGATTNSDSGVTD+ V PA+EAMA+VGMPLL+HGEVT VD+FD+E +IE V+K +VEK P LK+VMEHITT+EA +V A NV ATIT HLLYNRNAIF+GGI PHM+CLP+LKRE HR L++AATSGNPKFFLGTD+APHA + KIS CGCAGIFTGHA + LY E F+ A+D+L GFSS HG DFYG+PRN +TLV+ WTVP+ YSFG+ EVVPL+AG ++ W +
Sbjct: 55 KVDQFEIVAPDDWHHHLRDGDVLKETVFHASKSFKRIIVMPNLKPPVTTTEEAASYCERILAVVPEDKKESFQPLMTLYMTDRTSAEEIRKAKESGLVYAVKLYPAGATTNSDSGVTDIQNVYPALEAMADVGMPLLVHGEVTDQNVDVFDREPAYIERVLKGVVEKFPALKVVMEHITTAEAAEWVQAQGPNVGATITAHHLLYNRNAIFKGGICPHMFCLPILKRERHRQALLQAATSGNPKFFLGTDSAPHAVQNKISPCGCAGIFTGHAPMSLYAEAFDSVSAMDKLEGFSSFHGPDFYGLPRNSVKITLVRNPWTVPNVYSFGKDEVVPLKAGMDLEWTV 399
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A1Z4VTX1_9GAMM (Dihydroorotase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z4VTX1_9GAMM) HSP 1 Score: 464 bits (1193), Expect = 4.510e-161 Identity = 218/340 (64.12%), Postives = 268/340 (78.82%), Query Frame = 1
Query: 61 EVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQL 1080
++T+ + DD+H H RDG VL D V H++R RAI MPNLKPPV +T QAL+YR+RILA +P G DFTPLMTLY+TD +PEEIR A ASGHVYAVKLYPAGATT+SD+GVTD+ P +EAMAE G+PLL+HGEVT +DIFD+EA FIE ++PLV +LP+LK+V+EHITT + + FV + NVA T+T HLLYNRNA+ GGIRPH YCLPVLKRE+HR L+ AATSG+PKFFLGTD+APH + AK SACGCAG++T HAAIE Y E FE ALD+L GF+SHHGADFYG+PRN +TLV+E WTVP+ Y +V+PLRAG E++W+L
Sbjct: 2 QLTLTRPDDWHLHLRDGPVLADVVPHSARQCGRAIIMPNLKPPVVSTHQALDYRERILAAVPAGVDFTPLMTLYLTDNLSPEEIRTAAASGHVYAVKLYPAGATTHSDAGVTDIQHTLPTLEAMAEAGLPLLVHGEVTDPDIDIFDREAVFIERHLEPLVRRLPELKLVLEHITTRQGIEFVQGSGPNVAGTLTAHHLLYNRNAMLVGGIRPHYYCLPVLKRESHREALITAATSGSPKFFLGTDSAPHPQHAKESACGCAGLYTAHAAIEFYAEAFEQANALDKLEGFASHHGADFYGLPRNTDTITLVREPWTVPESYPLADAKVIPLRAGGEIAWRL 341
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: UPI001BB44DCC (dihydroorotase n=1 Tax=Ferrigenium kumadai TaxID=1682490 RepID=UPI001BB44DCC) HSP 1 Score: 459 bits (1180), Expect = 4.420e-159 Identity = 217/344 (63.08%), Postives = 271/344 (78.78%), Query Frame = 1
Query: 55 MEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQLVG 1086
M+++T+ + DD+H H RDG +++ + +R F RAI MPNL+PPVTTT+QALEYR RILA +P G F PLMTLY+TD ++ EEIRKAKASG V+AVKLYPAGATTNSD+GVTDL K A+E M GMPLL+HGE T +DIFD+EA FIE V++PL++ +P L++V EHITT +A FV +AP N+AAT+TPQHLLYNRNA+ GGIRPH YCLP+LKRETHR LVKAATSG+ KFFLGTD+APHA+ K +ACGCAG ++ H+AIELY EVFE ALD+L GF+S HGAD+YG+PRN+ +TL KE+W VP FG+ +VPLRAGE + W+LVG
Sbjct: 1 MQQLTLTRPDDWHLHLRDGALMQSVLPDTARQFARAIVMPNLRPPVTTTEQALEYRARILAVLPQGMKFEPLMTLYLTDNTSAEEIRKAKASGAVHAVKLYPAGATTNSDAGVTDLRKTYAALEEMQRCGMPLLVHGEATDAAIDIFDREAVFIERVMQPLLKDMPNLRVVFEHITTKDAAQFVMSAPDNIAATLTPQHLLYNRNAMLVGGIRPHFYCLPILKRETHREALVKAATSGSRKFFLGTDSAPHAQHTKENACGCAGCYSAHSAIELYAEVFEAAGALDKLEGFASFHGADYYGLPRNKETITLCKEEWQVPASVEFGEHRLVPLRAGETMKWKLVG 344
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A0F5VES5_9GAMM (Dihydroorotase n=9 Tax=Vibrionaceae TaxID=641 RepID=A0A0F5VES5_9GAMM) HSP 1 Score: 454 bits (1167), Expect = 4.030e-157 Identity = 222/342 (64.91%), Postives = 262/342 (76.61%), Query Frame = 1
Query: 55 MEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQL 1080
M +TI + DD+H H RDG+VLKDTVR SR RAI MPNL PPVT T AL YR RILA P F+PLM LY+TD +TP+EIRKAKASGHVYA KLYPAGATTNSDSGVTD+ K+ P MEAM EVGMPLLIHGEVT VDIFD+E F++ V+ P+V +P LK+V+EHITT +AV FV A NV ATIT HLLYNRN + GGIRPH YCLP+LKR TH+ L+ AATSG+ KFFLGTD+APHA+ K +ACGCAG +T HAAIELY EVFE +ALD+L GF+SHHG DFYG+PRN +TL K+ W VPD FG +VVP+RAGE++SW++
Sbjct: 1 MTSITITRPDDWHVHLRDGDVLKDTVRDISRYMGRAIIMPNLVPPVTDTSAALAYRDRILAAQPSET-FSPLMVLYLTDNTTPDEIRKAKASGHVYAAKLYPAGATTNSDSGVTDINKLLPTMEAMQEVGMPLLIHGEVTKHDVDIFDREKVFLDTVLAPIVAAMPNLKVVLEHITTKDAVDFVNNAGPNVGATITAHHLLYNRNHMLAGGIRPHFYCLPILKRNTHQEALIAAATSGSNKFFLGTDSAPHAKGKKEAACGCAGSYTAHAAIELYAEVFELADALDKLEGFASHHGPDFYGLPRNHDTITLTKQSWAVPDTMEFGADQVVPIRAGEQISWKV 341
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A2N2A9E6_9GAMM (Dihydroorotase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2N2A9E6_9GAMM) HSP 1 Score: 454 bits (1167), Expect = 4.180e-157 Identity = 217/342 (63.45%), Postives = 267/342 (78.07%), Query Frame = 1
Query: 55 MEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQL 1080
M +T+ + DD+H H RDG L V H + F RAI MPNL+PPVTTT QAL YR+R+LA +P G+ F PLMTLY+TD + EEI++AK SG V+AVKLYPAGATTNSDSGVTDL K PA+ AMAE+ +P L+HGEVT VDIFD+E F+E V+ PL+E++P LK+V+EHITT+EA FV AA NV AT+TPQHLL NRNA+ GG+RPH+YCLPVLKRE+HR L+ ATSGNPKFFLGTD+APHAR+ K +ACGCAGI++ HAAIELY E FE LD+L GF+S HGADFYG+PRN +TL +++WTVPD Y+FG VVP+RAGE V+W+L
Sbjct: 1 MNTLTLLRPDDWHLHLRDGAALAAVVPHTAAQFGRAIVMPNLRPPVTTTAQALAYRERVLAAVPAGSSFQPLMTLYLTDMTPAEEIQRAKESGAVFAVKLYPAGATTNSDSGVTDLRKCEPALRAMAELQLPFLVHGEVTDANVDIFDRERVFLERVLAPLLERIPDLKLVVEHITTAEAARFVLAAGPNVGATLTPQHLLLNRNAMLAGGMRPHLYCLPVLKRESHREVLLDVATSGNPKFFLGTDSAPHARKTKENACGCAGIYSAHAAIELYAEAFERAGRLDQLEGFASRHGADFYGLPRNRDTITLHRQEWTVPDSYAFGDDVVVPMRAGETVAWKL 342
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A1G5Q761_9GAMM (Dihydroorotase n=1 Tax=Thiohalomonas denitrificans TaxID=415747 RepID=A0A1G5Q761_9GAMM) HSP 1 Score: 453 bits (1165), Expect = 8.710e-157 Identity = 220/345 (63.77%), Postives = 265/345 (76.81%), Query Frame = 1
Query: 55 MEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQLVGE 1089
M +T+ + DD H H RD E L V H++ F RAI MPNL PPVTTT QA YRQRILA +P G DFTPLMTLY+TD + PE + +A SG V+AVKLYPAGATTNSDSGVTD+ K A+ MA G+PLL+HGEVT VDIFD+E FIE+V+ PL+E+ P LK+VMEHITT EAV FV A ANVAAT+TP HLL NRNA+ GGIRPH YCLPVLKRE+HR L++A+TSGNP+FFLGTD+APHAR AK +ACGCAGI++ HAA+ELY E FE ALDRL F++H+GADFYG+PRN G +TL K +W VP+ Y+FG +VPLRAGE V+W+LV +
Sbjct: 1 MTRLTLSRPDDLHLHLRDAEALPVVVPHSAERFGRAIVMPNLNPPVTTTAQATAYRQRILASVPAGQDFTPLMTLYLTDNTLPETVAEAAQSGAVHAVKLYPAGATTNSDSGVTDIGKADAALSEMAAAGLPLLVHGEVTDPAVDIFDRERVFIEQVLAPLLERHPDLKVVMEHITTREAVEFVKRAGANVAATVTPHHLLMNRNALLAGGIRPHHYCLPVLKRESHREALLEASTSGNPRFFLGTDSAPHARGAKETACGCAGIYSAHAALELYTEAFEQAGALDRLEAFAAHYGADFYGLPRNSGSVTLEKSEWRVPESYAFGGDHLVPLRAGETVAWRLVSD 345
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A833MQY2_9GAMM (Dihydroorotase n=2 Tax=Alkalilimnicola sp. S0819 TaxID=2613922 RepID=A0A833MQY2_9GAMM) HSP 1 Score: 452 bits (1163), Expect = 1.690e-156 Identity = 211/342 (61.70%), Postives = 268/342 (78.36%), Query Frame = 1
Query: 55 MEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQL 1080
M+E+T+ + DD+H H RDGE L+ H +R F RAI MPNL+PPVT+T+QAL YR+RILA +P G+DF PLMTLY+TD +TP EI +A+ASGHVY +KLYPAGATTNSD+GVT+LA A+ AMA+ G+PLL+H EVT GVDIFD+E FI + + PL+E++P+L++V EHITT+ A FV AP V ATITPQHLL NRN + GG++PH YCLP+LKRET R L+ AATSGNPKFFLGTD+APH R AK S CGCAG ++ HAA+ELY E FE ALD+L GF+SHHG DFY +PRN+G +TL ++ WTVP+ Y FG+ ++VPLRAG +++WQL
Sbjct: 1 MDELTLTRPDDWHLHLRDGEALQAVAPHTARQFARAIVMPNLRPPVTSTEQALAYRERILAALPAGSDFQPLMTLYLTDNTTPAEIARARASGHVYGIKLYPAGATTNSDAGVTELAHCESALRAMADCGLPLLVHAEVTDPGVDIFDRETVFIGQRLAPLIERIPELRVVFEHITTAAAAEFVQQAPDTVGATITPQHLLLNRNDLLVGGVQPHHYCLPILKRETDRKALLAAATSGNPKFFLGTDSAPHPRHAKESDCGCAGCYSAHAALELYAEAFEQAGALDKLEGFASHHGPDFYRLPRNQGTVTLRRQPWTVPEHYRFGEEQLVPLRAGGQLAWQL 342
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Match: A0A6N8E8V9_9GAMM (Dihydroorotase n=1 Tax=Allochromatium palmeri TaxID=231048 RepID=A0A6N8E8V9_9GAMM) HSP 1 Score: 452 bits (1163), Expect = 1.950e-156 Identity = 211/345 (61.16%), Postives = 271/345 (78.55%), Query Frame = 1
Query: 46 LTRMEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMFRRAIAMPNLKPPVTTTDQALEYRQRILACIPDGADFTPLMTLYMTDKSTPEEIRKAKASGHVYAVKLYPAGATTNSDSGVTDLAKVAPAMEAMAEVGMPLLIHGEVTTVGVDIFDKEARFIEEVIKPLVEKLPKLKIVMEHITTSEAVAFVTAAPANVAATITPQHLLYNRNAIFQGGIRPHMYCLPVLKRETHRLDLVKAATSGNPKFFLGTDTAPHAREAKISACGCAGIFTGHAAIELYCEVFEGEEALDRLAGFSSHHGADFYGIPRNEGYLTLVKEKWTVPDCYSFGQTEVVPLRAGEEVSWQL 1080
+ + + I + DD+H H RDG + D V ++R F RAI MPNLKPPV TT+QAL YR+RILA +P DF PLMTLY+TD++TPEEI +AK SG V A KLYPAGATTNS+SGVTD+ ++ P +EAM E GMPLL+HGEVT +DIFD+E FIE V++PL++++P L+IV+EH+TT+EAV+FV + P +AATITP HLLYNRNAI GGIRPH YCLPVLKRE HRL LV+AATSG+P+FFLGTD+APHA +K CGCAG+F+ HAA+ELY EVF+ AL+RL GF+S HG DFYG+PRN+ + L++E WTVP+ Y+FG ++VVP+RA E + W++
Sbjct: 1 MAQYASIEIIRPDDWHLHLRDGAAMADVVGLSARQFARAIVMPNLKPPVVTTEQALAYRERILAALPASRDFEPLMTLYLTDRTTPEEITRAKDSGLVAACKLYPAGATTNSESGVTDIPRLKPVLEAMREAGMPLLVHGEVTDEAIDIFDREPVFIERVLRPLIDQVPGLRIVLEHVTTAEAVSFVRSGPETLAATITPHHLLYNRNAILVGGIRPHFYCLPVLKRERHRLALVEAATSGHPRFFLGTDSAPHAVGSKEGRCGCAGLFSAHAALELYAEVFDQAGALERLEGFASLHGPDFYGLPRNQARIRLIREPWTVPESYAFGDSQVVPMRAAETIGWRI 345 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16542.1 >prot_C-linearis_contig9.16542.1 ID=prot_C-linearis_contig9.16542.1|Name=mRNA_C-linearis_contig9.16542.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=371bp VHVVSQSGQRLGVLWLTRMEEVTIPQVDDFHHHFRDGEVLKDTVRHASRMback to top mRNA from alignment at C-linearis_contig9:1231435..1235575+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16542.1 ID=mRNA_C-linearis_contig9.16542.1|Name=mRNA_C-linearis_contig9.16542.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4141bp|location=Sequence derived from alignment at C-linearis_contig9:1231435..1235575+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:1231435..1235575+ >mRNA_C-linearis_contig9.16542.1 ID=mRNA_C-linearis_contig9.16542.1|Name=mRNA_C-linearis_contig9.16542.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2226bp|location=Sequence derived from alignment at C-linearis_contig9:1231435..1235575+ (Chordaria linearis ClinC8C monoicous)back to top |