mRNA_C-linearis_contig9.16464.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig9.16464.1
Unique NamemRNA_C-linearis_contig9.16464.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5KFZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFZ4_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 8.690e-146
Identity = 221/309 (71.52%), Postives = 248/309 (80.26%), Query Frame = 1
Query:    1 FFQSVIDEELNVEQTHVEPPKDARPRYVWEHGWREEFQKSIGDDTVVEGSRPDTVGAMRDTTVSSAGGAXXXXVGAASGEGSVCPASETRAKDVEKFNRNCRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSPEVRSITTGQYAFIERA 927
            FFQSV D +LNVEQ   +PPKDA P  VWE GWREEF+K IG   V++   P T G+M +TTV SAGGA    VGA SG   V PASETRA+ V+KFNR CR++ RRLTVMCTS+VKSVLG RYMPSHAIKATQWAKSK +PR V+N +AEH G ATDSQV HRE+KFAR VEDSNLL+KCA CAAFSQDN D EPRVGVRQGEGP+I CVACVA W G EVGTL D   LKR+ +LS DDILVG DAAEGERR+G F ATL GAVSKSERIRS E GPLWCFEAQLREDV+P+ RS +TG+YAF++RA
Sbjct:  272 FFQSVTDVDLNVEQNPADPPKDAGPCKVWERGWREEFEKGIG---VMDRPSPATAGSMGETTVGSAGGAGSGDVGAISGGVPVLPASETRARAVDKFNRCCRSIRRRLTVMCTSVVKSVLGSRYMPSHAIKATQWAKSKNTPRPVLNFIAEHLGCATDSQVYHRESKFARVVEDSNLLAKCAKCAAFSQDNVDFEPRVGVRQGEGPYIPCVACVANWVGEEVGTLHDAGTLKRLSELSVDDILVGSDAAEGERRYGAFLATLFGAVSKSERIRSAEGGPLWCFEAQLREDVTPDARSNSTGKYAFVQRA 577          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5KK93_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK93_9PHAE)

HSP 1 Score: 437 bits (1125), Expect = 1.460e-142
Identity = 221/309 (71.52%), Postives = 248/309 (80.26%), Query Frame = 1
Query:    1 FFQSVIDEELNVEQTHVEPPKDARPRYVWEHGWREEFQKSIGDDTVVEGSRPDTVGAMRDTTVSSAGGAXXXXVGAASGEGSVCPASETRAKDVEKFNRNCRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSPEVRSITTGQYAFIERA 927
            FFQSV D +LNVEQ   +PPKDA P  VWE GWREEF+K IG   V++   P T G+M +TTV SAGGA    VGA SG   V PASETRA+ V+KFNR CR++ RRLTVMCTS+VKSVLG RYMPSHAIKATQWAKSK +PR V+N +AEH G ATDSQV HRE+KFAR VEDSNLL+KCA CAAFSQDN D EPRVGVRQGEGP+I CVACVA W G EVGTL D   LKR+ +LS DDILVG DAAEGERR+G F ATL GAVSKSERIRS E GPLWCFEAQLREDV+P+ RS +TG+YAF++RA
Sbjct:  570 FFQSVTDVDLNVEQNPADPPKDAGPCKVWERGWREEFEKGIG---VMDRPSPATAGSMGETTVGSAGGAGSGDVGAISGGVPVLPASETRARAVDKFNRCCRSIRRRLTVMCTSVVKSVLGSRYMPSHAIKATQWAKSKNTPRPVLNFIAEHLGCATDSQVYHRESKFARVVEDSNLLAKCAKCAAFSQDNVDFEPRVGVRQGEGPYIPCVACVANWVGEEVGTLHDAGTLKRLSELSVDDILVGSDAAEGERRYGAFLATLFGAVSKSERIRSAEGGPLWCFEAQLREDVTPDARSNSTGKYAFVQRA 875          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5JR31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR31_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 9.430e-73
Identity = 143/308 (46.43%), Postives = 190/308 (61.69%), Query Frame = 1
Query:    1 FFQSVIDEELNVEQTHVEPPKDARPRYVWEHGWREEFQKSIGDDTVVEGSRPDTVGAMRDTTVSSAGGAXXXXVGAASGEG-SVCPASETRAKDVEKFNRNCRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSPEVRSITTGQYAFIE 921
            FFQ ++ + L  E + + P       +VWE GWR+  ++    D  VE  R DT  ++ D   +S+ G      G  + EG SV P SE  A  ++  NR+ R+V R+L +MCT + K+VLG RY  SH IKA QWAKSK +PRVV++  A H  WATDSQVRHRE   A+ VED ++L K ATC AF  DNCD++P VGV Q E PH+S +A  A+  G  VG L+D S LKR   L+ DD++ GP+A  GERRF  F + L  AV +S  + S  +GP WC EAQLR+D +PE R+   G+YAFI+
Sbjct:  229 FFQRILYQPLCREVSSLAPTG-----WVWEAGWRDVHRRRDNGDGGVESRRADT--SVVDGGQASSLGTSVEGRGPGASEGPSVHPTSEKEAAKIDDANRHFRSVGRQLVMMCTGVAKAVLGTRYRASHHIKAAQWAKSKGTPRVVVDFCAAHGMWATDSQVRHREDFNAKVVEDGHMLPKDATCGAFPFDNCDMKPVVGVSQRE-PHLSTIAASAVTVGGSVGELEDTSKLKRYSLLTVDDVMKGPNAQGGERRFKAFQSRLRRAVYESASLGSTPDGPRWCVEAQLRKDWTPEERATLDGRYAFIQ 528          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5KEL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEL8_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 3.980e-54
Identity = 97/125 (77.60%), Postives = 105/125 (84.00%), Query Frame = 1
Query:  553 AAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSPEVRSITTGQYAFIERA 927
            +A   DNCD EP VGVRQGEGPHI CV CVALWAG EVG L+D S LKRIRDLS DDIL+  D AEGERR+G FFATLLGAVSKSER+RS E GPLWCFEAQLRED+S EVRS TTG+YAFI+RA
Sbjct:  547 SAGGSDNCDSEPGVGVRQGEGPHIPCVVCVALWAGAEVGMLEDASMLKRIRDLSLDDILLESDPAEGERRYGAFFATLLGAVSKSERMRSTEGGPLWCFEAQLREDISLEVRSNTTGRYAFIQRA 671          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 4.300e-54
Identity = 104/220 (47.27%), Postives = 142/220 (64.55%), Query Frame = 1
Query:  271 AKDVEKFNRNCRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGP--DAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSPEVRSITTGQYAFIER 924
            A+ ++  NR+ R+ +RRL VMCT +VK++L GR+M SH IK  QWAKSK + R VIN +AE+  WAT SQ++HRE   AR VED +LLS+ A CAA   DNCD +PRVGV QGEGPH+  +A  AL  GP+VG +DD   +K    L+ +D+L+GP  D  +G RR+  F + L   V    R  S       CFE++LR  ++PE +S    +YAFI++
Sbjct:  662 ARHIDSLNRDRRSTHRRLLVMCTVVVKAILRGRHMGSHDIKGAQWAKSKGTCRDVINFVAEYGLWATTSQIQHREDFHARFVEDKDLLSRDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDDWWMVKSRGSLTVEDVLMGPERDREDGARRYNEFSSELYRGVFAEARNNSDRAAADTCFESELRTAITPEGKSPQQLRYAFIQK 881          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5JDT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDT2_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 2.070e-52
Identity = 98/183 (53.55%), Postives = 123/183 (67.21%), Query Frame = 1
Query:  373 MPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSPEVRSITTGQYAFIE 921
            M SH IKA QWAKSK +PRVV++  A H  WATD QVRHRE   A+ VED + L K ATC AF  DNCD++P VGV QGE PH+S +A   +  G  VG L+D S LKR   L+ DD++ GP+A  GERRF  F + L  AV +S  + S  +GPLWC EAQLR+D++PE R+   G+Y FI+
Sbjct:    1 MASHHIKAAQWAKSKGTPRVVVDFCAAHGMWATDRQVRHREDFNAKVVEDGDKLPKDATCGAFPFDNCDMKPVVGVSQGE-PHLSTIAASVVTVGGSVGKLEDASRLKRYSLLTLDDVMKGPNAQGGERRFEAFQSQLRRAVYESASLGSTPDGPLWCVEAQLRKDLTPEERATLDGRYVFIQ 182          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5KSG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG4_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 7.360e-52
Identity = 99/208 (47.60%), Postives = 128/208 (61.54%), Query Frame = 1
Query:  262 ETRAKDVEKFNRNCRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGP--DAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSP 879
            +  A+ +   NR+ R+ +RRL VMCT +V ++L GRYM SH IK  QWAKSK + R V N +AEH  WAT SQ++HRE   AR VED +LLS+ A CAA   DNCD +PRVGV QGEGPH+  +A  AL  GP+VG +DD   +K    L+ +D+L+GP  D  +G RR+  F A L   V    R  S       CFE +LR+   P
Sbjct:  397 KNEARHINSLNRDRRSTHRRLLVMCTVVVTAILRGRYMGSHDIKGAQWAKSKGTCREVTNFVAEHGLWATTSQIQHREDYHARFVEDKDLLSQDAECAAIPLDNCDFDPRVGVGQGEGPHLPFIAATALTVGPDVGRMDDWWLVKGRGSLTVEDVLMGPERDRGDGARRYNEFSADLYRGVFAEARNNSDRAAADTCFECELRKSRPP 604          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5L193_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L193_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 9.250e-46
Identity = 93/208 (44.71%), Postives = 128/208 (61.54%), Query Frame = 1
Query:  259 SETRAKDVEKFNRNCRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLRE-DVSP 879
            SE  A  +E  N++ R   RRL ++C   VK++  GR++ +  IK  QWAKSK + R VI+ +A H  WAT SQV+HRE   A+ VED ++L K A CAA + DNCD +PRVG RQG+GPHIS +A  A+  G +V  + D + L+R R L+ D I  G D  EG+RRF  F  TL  A   S    S E+ P  C E+++R+ ++SP
Sbjct:  507 SEAAAISIETTNQDRRGFARRLYMLCKCTVKAIFPGRHLTAADIKGAQWAKSKGTCRQVIDFVAGHGLWATTSQVQHREDYHAKVVEDKDILPKGAQCAAIANDNCDNDPRVGERQGKGPHISFIAATAVTVGDDVVRMQDAASLRRRRSLTVDQITKGLDQEEGDRRFKDFERTLRRAAVDSVLSSSSEDSPWTCVESEIRKHNISP 714          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5JL54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL54_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 2.750e-42
Identity = 87/192 (45.31%), Postives = 120/192 (62.50%), Query Frame = 1
Query:  244 SVCPASETRAKDVEKFNRNCRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGP--DAAEGERRFGTFFATLLGAVSKSER 813
            S+ P +E +A+ ++   R+ R+ + RL VMCT +VK++L GR+M SH IK  QW KSK + R VIN +AEH  WAT SQ +HRE   AR VED +LLS+ A CAA   +N D +PRV V Q EGPH+  +A  AL  GP+VG +DD   ++    L+ +D+++GP  D  +G RR+  F A L   V    R
Sbjct:  427 SLGPRTEEQARHIDSLTRDRRSAHGRLLVMCTVVVKAILRGRHMGSHDIKGAQWGKSKSTCRDVINFVAEHGLWATTSQTQHREDFHARFVEDKDLLSQDAECAAIPLNNYDFDPRVRVGQREGPHLPFIAATALTVGPDVGRMDDWWLVRSRGSLTVEDVILGPERDREDGARRYNEFSAELYRGVFTEAR 618          
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Match: A0A6H5KBR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR1_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.510e-40
Identity = 88/184 (47.83%), Postives = 112/184 (60.87%), Query Frame = 1
Query:  316 RRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMAEHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGVRQGEGPH-ISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAEGERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLR 864
            RRL ++C   VK+V  GR + +  IK  QWAKSK + R  I+ +A H  WAT SQV+HRE   A  VED ++L K A CAA + DNCD +PRVG RQGEGPH IS +A  A+  G +VG + D + L+R R  + D I  G D AEG+RRF  F  TL  A   S    S E+ P  C E++LR
Sbjct:  511 RRLYMLCKCTVKAVFPGRDLTAADIKGAQWAKSKGTCRQDIDFVAGHGWWATTSQVQHREDYHANVVEDKDILPKGAQCAAIANDNCDHDPRVGERQGEGPHNISFIAATAVTVGYDVGRMQDAASLRRRRSHTVDQITKGLDQAEGDRRFKDFERTLRRAAVDSVLSSSSEDSPWACVESELR 694          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KFZ4_9PHAE8.690e-14671.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KK93_9PHAE1.460e-14271.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR31_9PHAE9.430e-7346.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEL8_9PHAE3.980e-5477.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6D9_9PHAE4.300e-5447.27Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDT2_9PHAE2.070e-5253.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSG4_9PHAE7.360e-5247.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L193_9PHAE9.250e-4644.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL54_9PHAE2.750e-4245.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBR1_9PHAE1.510e-4047.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig9contigC-linearis_contig9:232198..233618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size930
Cds size927
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930700.3348794-CDS-C-linearis_contig9:232199..2322591622930700.3348794-CDS-C-linearis_contig9:232199..232259Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 232200..232259 -
1690881204.2488952-CDS-C-linearis_contig9:232199..2322591690881204.2488952-CDS-C-linearis_contig9:232199..232259Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 232200..232259 -
1622930700.3573368-CDS-C-linearis_contig9:232751..2336181622930700.3573368-CDS-C-linearis_contig9:232751..233618Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 232752..233618 -
1690881204.2683027-CDS-C-linearis_contig9:232751..2336181690881204.2683027-CDS-C-linearis_contig9:232751..233618Chordaria linearis ClinC8C monoicousCDSC-linearis_contig9 232752..233618 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig9.16464.1prot_C-linearis_contig9.16464.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig9 232200..233618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig9.16464.1

>prot_C-linearis_contig9.16464.1 ID=prot_C-linearis_contig9.16464.1|Name=mRNA_C-linearis_contig9.16464.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=309bp
FFQSVIDEELNVEQTHVEPPKDARPRYVWEHGWREEFQKSIGDDTVVEGS
RPDTVGAMRDTTVSSAGGAGGGGVGAASGEGSVCPASETRAKDVEKFNRN
CRAVNRRLTVMCTSIVKSVLGGRYMPSHAIKATQWAKSKKSPRVVINHMA
EHCGWATDSQVRHRETKFARTVEDSNLLSKCATCAAFSQDNCDLEPRVGV
RQGEGPHISCVACVALWAGPEVGTLDDNSGLKRIRDLSTDDILVGPDAAE
GERRFGTFFATLLGAVSKSERIRSKEEGPLWCFEAQLREDVSPEVRSITT
GQYAFIERA
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mRNA from alignment at C-linearis_contig9:232198..233618-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig9.16464.1 ID=mRNA_C-linearis_contig9.16464.1|Name=mRNA_C-linearis_contig9.16464.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1421bp|location=Sequence derived from alignment at C-linearis_contig9:232198..233618- (Chordaria linearis ClinC8C monoicous)
TTTTTCCAGAGCGTGATTGACGAGGAGTTGAATGTCGAGCAGACCCATGT GGAGCCCCCCAAGGACGCAAGGCCGCGTTACGTGTGGGAGCACGGGTGGC GAGAGGAGTTCCAAAAAAGCATCGGCGACGACACCGTTGTCGAAGGGAGC CGCCCAGACACTGTCGGGGCGATGCGTGACACGACGGTGAGCTCTGCTGG TGGAGCCGGGGGTGGTGGTGTGGGTGCAGCATCGGGAGAGGGGTCGGTGT GCCCGGCGTCTGAGACACGTGCGAAAGATGTCGAGAAATTCAACCGAAAT TGCCGAGCCGTTAATCGGCGGTTGACCGTGATGTGCACGAGCATCGTGAA GTCTGTCTTGGGTGGGCGGTACATGCCCTCGCACGCCATAAAGGCGACCC AGTGGGCAAAGTCGAAAAAATCCCCTCGAGTTGTAATCAACCATATGGCG GAGCACTGCGGGTGGGCGACCGATTCTCAAGTGCGTCACCGAGAAACCAA GTTCGCCCGAACGGTGGAAGACTCAAACCTTCTTTCCAAGTGCGCGACGT GCGCCGCTTTTTCTCAGGACAACTGCGATTTGGAGCCCCGTGTCGGAGTC AGGCAGGGGGAAGGTCCGCATATTTCGTGCGTTGCGTGTGTGGCGTTGTG GGCGGGGCCGGAGGTGGGCACGCTCGACGACAACAGCGGACTGAAGCGAA TTCGCGATTTGAGTACGGACGACATCCTCGTTGGACCAGACGCGGCAGAG GGAGAGCGGCGGTTTGGGACTTTCTTCGCTACGCTCCTCGGAGCCGTGTC GAAGTCAGAGCGGATCAGGTCGAAGGAGGAGGGGCCGTTGTGGTGTTTTG AGGCCCAACTTAGGGAGGTGAGAGGTGACGTACATGTATTTCTGAATATT TTCTTTGTCTTTTCCTTTTAGCCGGGTCGTTTTTAATTCCACCACATCAT CTAAGCAGTACAATAGGTCGTTTCCCAACTAAGTTCTGACGAAAAGAAAC GACACCAGAAACACACGCGGTGCATCTGGGAGGGGGGAAAATGCGGAACC GGCAACGAAGTGGTATCTTTATATATTTTCTAGTCTTGATTTGTACTTTC GGATACGGCAGACCTGAGGCTCTTTATGGCGAATTCTTTGTTCTTCATGT CTCCCATCGTGCCATCATGAGTTGTATATGTGAGTCGCGAACCCACGACA ACCACGAACTTCAGCGGCGATTATATTTTTTTTAACAAGCCTCAATGAGA ACAGGCCTCGTCATCTGTGTGCGTGCGTGTGTGTGTGATATCAATTTTGC CAACTCTTTGTGTATGCTGTTCCCAATCCCGCTTCGTGATGCTCGTACTG TGTCCGTAGGATGTTTCGCCGGAGGTGAGATCAATCACTACGGGACAGTA CGCCTTCATCGAGCGCGCCAG
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Coding sequence (CDS) from alignment at C-linearis_contig9:232198..233618-

>mRNA_C-linearis_contig9.16464.1 ID=mRNA_C-linearis_contig9.16464.1|Name=mRNA_C-linearis_contig9.16464.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1854bp|location=Sequence derived from alignment at C-linearis_contig9:232198..233618- (Chordaria linearis ClinC8C monoicous)
TTTTTCCAGAGCGTGATTGACGAGGAGTTGAATGTCGAGCAGACCCATGT
GGAGCCCCCCAAGGACGCAAGGCCGCGTTACGTGTGGGAGCACGGGTGGC
GAGAGGAGTTCCAAAAAAGCATCGGCGACGACACCGTTGTCGAAGGGAGC
CGCCCAGACACTGTCGGGGCGATGCGTGACACGACGGTGAGCTCTGCTGG
TGGAGCCGGGGGTGGTGGTGTGGGTGCAGCATCGGGAGAGGGGTCGGTGT
GCCCGGCGTCTGAGACACGTGCGAAAGATGTCGAGAAATTCAACCGAAAT
TGCCGAGCCGTTAATCGGCGGTTGACCGTGATGTGCACGAGCATCGTGAA
GTCTGTCTTGGGTGGGCGGTACATGCCCTCGCACGCCATAAAGGCGACCC
AGTGGGCAAAGTCGAAAAAATCCCCTCGAGTTGTAATCAACCATATGGCG
GAGCACTGCGGGTGGGCGACCGATTCTCAAGTGCGTCACCGAGAAACCAA
GTTCGCCCGAACGGTGGAAGACTCAAACCTTCTTTCCAAGTGCGCGACGT
GCGCCGCTTTTTCTCAGGACAACTGCGATTTGGAGCCCCGTGTCGGAGTC
AGGCAGGGGGAAGGTCCGCATATTTCGTGCGTTGCGTGTGTGGCGTTGTG
GGCGGGGCCGGAGGTGGGCACGCTCGACGACAACAGCGGACTGAAGCGAA
TTCGCGATTTGAGTACGGACGACATCCTCGTTGGACCAGACGCGGCAGAG
GGAGAGCGGCGGTTTGGGACTTTCTTCGCTACGCTCCTCGGAGCCGTGTC
GAAGTCAGAGCGGATCAGGTCGAAGGAGGAGGGGCCGTTGTGGTGTTTTG
AGGCCCAACTTAGGGAGTTTTTCCAGAGCGTGATTGACGAGGAGTTGAAT
GTCGAGCAGACCCATGTGGAGCCCCCCAAGGACGCAAGGCCGCGTTACGT
GTGGGAGCACGGGTGGCGAGAGGAGTTCCAAAAAAGCATCGGCGACGACA
CCGTTGTCGAAGGGAGCCGCCCAGACACTGTCGGGGCGATGCGTGACACG
ACGGTGAGCTCTGCTGGTGGAGCCGGGGGTGGTGGTGTGGGTGCAGCATC
GGGAGAGGGGTCGGTGTGCCCGGCGTCTGAGACACGTGCGAAAGATGTCG
AGAAATTCAACCGAAATTGCCGAGCCGTTAATCGGCGGTTGACCGTGATG
TGCACGAGCATCGTGAAGTCTGTCTTGGGTGGGCGGTACATGCCCTCGCA
CGCCATAAAGGCGACCCAGTGGGCAAAGTCGAAAAAATCCCCTCGAGTTG
TAATCAACCATATGGCGGAGCACTGCGGGTGGGCGACCGATTCTCAAGTG
CGTCACCGAGAAACCAAGTTCGCCCGAACGGTGGAAGACTCAAACCTTCT
TTCCAAGTGCGCGACGTGCGCCGCTTTTTCTCAGGACAACTGCGATTTGG
AGCCCCGTGTCGGAGTCAGGCAGGGGGAAGGTCCGCATATTTCGTGCGTT
GCGTGTGTGGCGTTGTGGGCGGGGCCGGAGGTGGGCACGCTCGACGACAA
CAGCGGACTGAAGCGAATTCGCGATTTGAGTACGGACGACATCCTCGTTG
GACCAGACGCGGCAGAGGGAGAGCGGCGGTTTGGGACTTTCTTCGCTACG
CTCCTCGGAGCCGTGTCGAAGTCAGAGCGGATCAGGTCGAAGGAGGAGGG
GCCGTTGTGGTGTTTTGAGGCCCAACTTAGGGAGGATGTTTCGCCGGAGG
TGAGATCAATCACTACGGGACAGTACGCCTTCATCGAGCGCGCCGATGTT
TCGCCGGAGGTGAGATCAATCACTACGGGACAGTACGCCTTCATCGAGCG
CGCC
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