mRNA_C-linearis_contig9.16460.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: A0A6H5JK89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK89_9PHAE) HSP 1 Score: 732 bits (1890), Expect = 3.750e-223 Identity = 761/1407 (54.09%), Postives = 878/1407 (62.40%), Query Frame = 2
Query: 248 VPQVSRASRGKANGDRVSWCIRDWAAVATSKGISTPASALCQALVELDKILTTVENTSVKYSADDQFYALVSFFDVVARGILLCLEDTASAAGGR-YSRSLETLRGFVVEAKEVARRLGVKGRLGLLSRKKHLHVNLERDLEAVSDAVYRFAASHKPELATDEHHYERNRVGFLASRVAIPPRSPQIREWYVPRREVVQEACQRLGIYS--AEGEAGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRR----YLIVADDVYEPEVLQELMGVGACVLYTT-RLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGVP-HAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLF----DRQEDSAANAA--ELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRLASISRTSNSGGGD--RSGSDKLLLADHLHSLGCVSAELRKADQAEAAHARARSIREEELGAHHPEVGNSLQVLAACAAAEGKPEAEQRLLQQALSIWDRHRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARALQSLGGHAIQQGRPAEAEGLLRRAVASWEAALGGDHPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVLASGGRTVEAEVLFMRALEIRK---------GLGAPLDAASTLHCLGECASERSGGD----GTGEQEXXXXXXXXXXXXXXXRSTPRFALEEAEGFYRRALEIQEKEIGPDHLYVAHTLFQLGRSLCSSAXXXXXXXXXXXXRRKSEEAMSVLSRSLAVREKELGRNHEDVLRTLHQLGACASAAGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRQSLDIPEEPADGGRGXXXXXXXXXXXXRHRGHHLDVALTLQQLAVCAADAGRVDEADVLFRSVLEVEERKL 4378
V V+ +S A DR+S C+R A T KG S A ALC+ALVELD + V S + +LVS FD VARG+LLC E A AGG +RS+ETL V AK+VA L VK RL LS K LER+L ++D ++ FA H PELATDE YERNRV FLAS+V +P R+P+I+ WY+PR E V++ C RLG+ S A G+ G +VGL GPTGCGKSTV ++VVAREDVR YF +G+VWLPV GKGA++RLP+LM LA++V+ET L+ + S + PP +A DR++ AA+IR LG+ T R E GG G RR YLIVADDVYEPEVL+EL G+GA VLYTT R +R DG D+LRLD++ + E ET+LRRA G+ A LPQ A +IK+YGS M + Y+GRWGVVRG D KAW+ AL+ VF+E GDGG+ WTRRRWHTAVLFAG+ADL RLNDKAKDLYL LAVLP+GL FTP DAAALLF D + AA AA +L + +E+L +LERCSVL LEE GRY +H HA FVR+ ISCFPLSR RAL RWR H ST AALFAWPVED V I + L E+ PYDA+L MD SD A VLERVA+ ALA + AHAKY RLV +TESRL +GGGD R +LLLAD LH+LG ++ L ++A A H RARSIREE LGA HP+ +SLQ LAACAAA KP+ E+ L++ALS W + XXXXXXX AR L +LGG++++ GR EA L RRA+ WE ALG T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L G + A L A LDAASTL CL ECA R GD G XXXXXXXXXXXXX PR LE EGF RRAL IQE+E+G DH++VA+TLFQLGR LCS+ K+EE ++ +R SAAGR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPE+ + R GHHLDVALT+QQ+AVCAADAGR ++AD LFR VL +EERKL
Sbjct: 74 VSSVAPSSGPGAQTDRLSSCVRKGADTYT-KGSSAAACALCEALVELDHL--------VHKSGHKELSSLVSVFDCVARGVLLCCEHPAEGAGGGGCARSVETLTQHVENAKKVAATLCVKRRLARLSSSKR---QLERELRNLTDELHFFATHHTPELATDESGYERNRVAFLASKVKVPSRAPRIQAWYIPRSETVEDVCARLGVCSGSAVGDLGDHEEPR-------------MVGLAGPTGCGKSTVTSLVVAREDVRAYFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETILKSGEASWSSKKLRPPRTPGGVAC--DRENGAAYIRGALGI-------TFPGREEGDGGGGSHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDGDGGDH---------ADVLRLDNISDAEGETVLRRASGLDAEAELPQPALDLIKSYGSVVMDLAYIGRWGVVRGTTDAKAWEAALNSVFLEGGDGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPTDAAALLFGGGGDTKATQAAKAATPDLGAVMEVLGVLERCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHTSTPAALFAWPVEDSVRIQWALLSLDDAVESPPPPYDAMLDGMDQSD--ADTFSAVLERVAQVQALAGNLEGAHAKYTRLVGVTESRL----EREAAGGGDSIRQAGAELLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREERLGASHPDAAHSLQALAACAAAACKPQDEEWYLRRALSSWTGEGEDGXXXXXXXSVHLLDRWN-------------------------------VARTLHTLGGNSLKAGRTGEATELFRRALQWWEDALG--QGCTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGAAGGPGTFTLDMACTLHDLGGVIFAXXXXXXXXXXXXXXXXXXXXXSLEASLDAASTLQCLAECARARGSGDSGLVGDNRSSXXXXXXXXXXXXXQEGGVPR-RLE--EGFLRRALAIQERELGRDHVFVAYTLFQLGRCLCSATPAAGDGP-------KTEEGLAAFARXXXXXXXXXXXXXXXXXXXXXXXXXXVSAAGRVGEAAEYYRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPEKQHE--EEGVEEEKEGGNSSRCGGHHLDVALTMQQVAVCAADAGRTEDADSLFREVLAIEERKL 1386
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: D7G2X0_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X0_ECTSI) HSP 1 Score: 577 bits (1488), Expect = 5.690e-174 Identity = 664/1175 (56.51%), Postives = 758/1175 (64.51%), Query Frame = 2
Query: 947 VVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGR-------RYLIVADDVYEPEVLQELMGVGACVLYTT-RLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGV-PHAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLFDRQEDSAANAA-ELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRLASISRTSNSGGGD---RSGSDKLLLADHLHSLGCVSAELRKADQAEAAHARARSIREEELGAHHPEVGNSLQVLAACAAAEGKPEAEQRLLQQALSIWDRHRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARALQSLGGHAIQQGRPAEAEGLLRRAVASWEAALGGDHPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVLASGGRTVEAEVLFMRALEIRK---------GLGAPLDAASTLHCLGECASERSGGDG-----TGEQEXXXXXXXXXXXXXXXRSTPRFALEEAEGFYRRALEIQEKEIGPDHLYVAHTLFQLGRSLCSSAXXXXXXXXXXXXRRKSEEAMSVLSRSLAVREKELGRNHEDVLRTLHQLGACASAAGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRQSLDIPE--EPADGGRGXXXXXXXXXXXXRHRGHHLDVALTLQQLAVCAADAGRVDEADVLFRSVLEVEERKLGA 4384
+VGL GPTGCGKSTV ++VVAREDVR +F +G+VWLPV GKGA++RLP+LM LA++V+ET L+ + S + PP +A DR++ AA+IR LG+ RP G + GDGGG RYLIVADDVYEPEVL+EL G+GA VLYTT R +R D XXXXXX D+LRLD++ + E ET+LRRA G+ P A LPQ A + K+YGS M + Y+GRWGVV G D KAW++AL+ VF+E G+GG+ WTRRRWHTAVLFAG+ADL RLNDKAKDLYL LAVLP+GL FTP DAAALLF +A A +L + +E+L +LE+CSVL LEE GRY +H HA FVR+ ISCFPLSR RAL RWR H ST AALFAWPVED V I ++ L E PYDA+L MD SD A VLERVA+ ALA + AHAKY RLV +TESRL +GGGD ++G++ LLLAD LH+LG ++ L ++A A H RARSIREE LGA HP+ +SLQ LAACAAA GKP+ E+ L++ALS W + XXXXXXXXXXXXX AR L +LGG++++ GR EA L RRA+ WE ALG T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L G + A L A LDAASTL CL ECA R GDG XXXXXXXXXXXXXX R LE EGF RRAL IQEKE+G DH+YVA+TLFQLGR LCS+A K+EE ++ +R SAAGR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IPE E HHLDVALT+QQ+AVCAADAGR ++AD LFR VL +EERKLGA
Sbjct: 1 MVGLAGPTGCGKSTVTSLVVAREDVRAHFRDGIVWLPVRGKGAEHRLPDLMLLLANMVYETVLKSGEASWSSKKLRPPRTPGGVAC--DRENGAAYIRGALGIT----RPGG------EEGDGGGESHEQRRWRPRYLIVADDVYEPEVLEELQGIGAWVLYTTTRSASFIRRNGERSEGDXXXXXXXGDH-----ADVLRLDNISDAEGETVLRRASGLDPEAELPQPALDLFKSYGSVVMDLAYIGRWGVVHGTTDVKAWEVALNSVFLEGGEGGQEWTRRRWHTAVLFAGMADLARLNDKAKDLYLSLAVLPKGLSFTPADAAALLFGGDTKAAKAATPDLGAVMEVLGVLEQCSVLFLEEGGRYCMHGSHADFVRELISCFPLSRKRALGRWREHASTPAALFAWPVEDSVRIQWALSSLDDAVEPPP-PYDAMLDGMDQSD--ADTFSAVLERVAQVQALAGNLEGAHAKYTRLVVVTESRL----EREAAGGGDSISQAGAE-LLLADRLHNLGMIAGGLGSTEEAFACHGRARSIREERLGASHPDAAHSLQALAACAAAAGKPQDEEWYLRRALSSWTGEGEDXXXXXXXXXXXXXSVDLLDRWD--------------------------VARTLHTLGGNSLKAGRTGEATELFRRALRWWEDALG--QGCTNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAGAAGSPGTFTLDMAYTLHDLGGVIFAXXXXXXXXXXXXXXXXXXXXXSLEASLDAASTLQCLAECARARGSGDGGLVSDNRSSXXXXXXXXXXXXXXXQEGGVRQRLE--EGFLRRALAIQEKELGRDHVYVAYTLFQLGRCLCSAAPAAGNGP-------KTEEGLAAFARXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAGRVGEAAEYYRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIPEKQEQEXXXXEGVEEKKAGGNSSWSGDHHLDVALTMQQVAVCAADAGRTEDADALFREVLAIEERKLGA 1113
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: A0A6H5KZP3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZP3_9PHAE) HSP 1 Score: 309 bits (791), Expect = 1.930e-84 Identity = 227/597 (38.02%), Postives = 301/597 (50.42%), Query Frame = 2
Query: 767 ASRVAIPPRSPQIREWYVPRREVVQEACQRLGIYSAEGEAGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGACVLYTTRLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGV-PHAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLFDRQEDSAANAAELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKY--ARLVELTESRLASISRTSNSGGGDRSGSDKLLLADHLHSLGCVSAELRKADQAEAAHARARSIREEEL 2548
A VA+P +P+I EW+V R+E V EAC LGI S + E P VVG+ GP G GKST+A+MV+AR+DVR YFY+GV+WLPVG +GAK+ LPELM LA +V+ET LR++ PPR A + + P+ D A +I V+ R+L+VADD+ EPEVL+EL G VLYT+R + GAP LLRLD + +EE +LRRA G+ A LP AH +++ AM + + GRWGVVRGK DE+AW AL + EA G W A+L G +L + K+LYL LA+LP+GL F + AA LL+ + +A ELE+ + L LER S+L LE G+YRVH+ HA FVR+ R AL+RWR + S AL + LV IW +A+L G PYDA L D D + KL L+R ARFH D EA+ K RL+E T + G L +A LH LG + + ++AE + RA +I E L
Sbjct: 119 AGEVAVPSGAPRIHEWHVERKEAVAEACDSLGIGSGKSEFFEMPR---------------VVGMSGPGGSGKSTLASMVIARQDVREYFYKGVLWLPVG-EGAKHCLPELMLHLARMVYETVLRKACR---------PPRLAGVGVDPE--DGAGYIHEVVNES----------------------NHRFLVVADDIREPEVLEELKWAGVWVLYTSRRDDLLT-----GAP------------------LLRLDAVTKEEGGMVLRRAAGLGDDATLPPAAHELMQRCEYGAMQLAFAGRWGVVRGKSDEEAWRAALGHI-AEAQKRGGNGRLLAWRDAMLRIGPDELEADSLHTKELYLSLAILPKGLAFRSKVAAVLLYGDE----CSADELEAAGKALETLERLSILTLEVSGKYRVHEVHADFVRECEVANNEEREMALARWRGYASDLRALSTYSSAWLVKIWDVIAQLEGTGPVAS-PYDAAL---DRVDPSSPKLAKALKRAARFHWRREDRLEAYTKQYQLRLIEETAAE----------------GPSSLAVAKTLHILGMCVYKAGRKEEAEDNYQRALTIFRERL 618
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: A0A6H5JI56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI56_9PHAE) HSP 1 Score: 286 bits (732), Expect = 1.980e-74 Identity = 201/545 (36.88%), Postives = 280/545 (51.38%), Query Frame = 2
Query: 764 LASRVAIPPRSPQIREWYVPRREVVQEACQRLGIYSAEGE--AGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEG-VVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGACVLYTTRLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGV-PHAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLFDRQEDSAANAAELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGE--RPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRLA 2380
L S+ P +P +++W++ R VV C RLG+ G +G P VVG+ GP+G GKST+A+M++AR DVRG+F E +VWLPVG +GA+ RL ++M RLA +VHE + S + PP P I + P+ D AA++R +L GE+ G G L+VADD++E EVL EL GA +LYTTR + + D+LR+D++ E EAE ILRRA + H LP AH +I+ G AM + YVGRW +VRG D+ AW + L+ V ++A + K W +AVL GL LG + K+LYL L VLPR L F+ D AL+ D +A EL++ + LE+ SVL E GRYRVH HA IS P + AL+RWR VSTA A+ AW E+LVDIW + L A E +PY ++ +M+ SD A +L L R+A F + + A +++L+ E A
Sbjct: 298 LYSKAKGPAEAPLLQDWFIQREPVVAAICDRLGVNDRGGSRASGEPP----------------VVGVAGPSGAGKSTIASMIIARNDVRGHFSEKRIVWLPVG-QGARDRLLDVMYRLAVMVHELVVNSSSFPDDGPFRPPQPPD--IGVEPE--DGAAYVREILTA----------DEGERSSGGFG----ELLVVADDIWEAEVLAELRSTGASILYTTRSEEDLLAAS-------------------GGSDVLRVDEVTEGEAEEILRRAADLLDHTKLPDAAHDIIRRGGPVAMDVAYVGRWDIVRGNNDQAAWAVVLAHV-IDAQNFMKGAALLPWRSAVLRVGLTRLGLADQGTKELYLSLGVLPRNLSFSVGDVTALVSD------GSAEELQAATLAITTLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPATLGSALARWRNRVSTAEAVLAWRTEELVDIWQAIWSLEIGEGAAEIGQPYSEIVDAMNLSDAGAFQL---LRRIAFFQWMTNEPDAACMSWSKLLASGEDSAA 778
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: D8LT49_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT49_ECTSI) HSP 1 Score: 281 bits (720), Expect = 4.330e-73 Identity = 203/538 (37.73%), Postives = 275/538 (51.12%), Query Frame = 2
Query: 785 PPRSPQIREWYVPRREVVQEACQRLGIYS-AEGEAGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYE-GVVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGACVLYTTRLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGV-PHAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLFDRQEDSAANAAELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGE---RPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRLA 2380
P +P +++W++ R VV C RLG+ A P VVG+ GP+G GKST+A+M+VAR DVRG+F + GVVWL VG +GA+ RL ++M RLA +VHE L S S P PP R I + P+ D AA++R +L GE+ G G L+VADDV+E EVL EL GA +LYTTR + + +LR+D++ E EAE +LRRA + ++ LP AH +I+ GS AM + YVGRW +VRGK D+ AW L+ V ++A + K W +AVL G+ LG + K+LYL L VLPR L F+ D AL+ D +A EL++ + LE+ SVL E GRYRVH HA IS P AL+RWR VSTA A+ W E+LVDIW + L GE E +PY + +MD SD A +L L R+A F L + A +++L+ E A
Sbjct: 261 PAEAPLLQDWFIQREPVVAAICDRLGVNDRGRSRASGEPP---------------VVGVAGPSGAGKSTIASMIVARHDVRGHFSQKGVVWLSVG-QGARDRLLDVMYRLAVMVHE--LADSSSSPDDGPFRPP-RTPDIGVEPE--DGAAYVREILAA----------DEGERSSGGFG----ELLVVADDVWEAEVLAELRNTGASILYTTRSEEDLLAAS-------------------GGSSVLRVDEVTEGEAEELLRRAAALLDYSKLPDAAHDIIRRGGSVAMDVAYVGRWDIVRGKNDQAAWAAVLAHV-IDAQNFMKGAALLPWRSAVLRVGVTRLGLADQGTKELYLSLGVLPRNLSFSVDDVTALVSD------GSAEELQAATLAMATLEQWSVLVRTEGGRYRVHHSHADMAWQGISEDPAILGPALARWRNRVSTAEAVLTWRTEELVDIWETIWSLEI-GEGAEDIGQPYAETVDAMDLSDAGAFQL---LRRIAFFQWLTNEPDAACMSWSKLLASGEDSAA 733
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: A0A6H5KXU5_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU5_9PHAE) HSP 1 Score: 267 bits (682), Expect = 1.030e-70 Identity = 243/765 (31.76%), Postives = 348/765 (45.49%), Query Frame = 2
Query: 287 GDRVSWCIRDWAAVATSKGISTPASAL-CQALVELDKILTTVENTSVKYSADDQFYALVSFFDVVARGILLCLEDTASAAGGRYSRSLETLRGFVVEAKEVARRLGVKGRLGLLSRKKHLHV--NLERDLEAVSDAVYRFAASHKPELATDEHHYERNRVGFLAS--------------RVAIPPRSPQIREWYVPRREVVQEACQRLGIYSAEG-----EAGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGACVLYTTRLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGVPHAA-LPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLF-DRQEDSAANAAELESTLELLVLLERCSVLALEER-GRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRLASISRTSNSGGGDRSGSDKLLLADHLHSLGCVSAELRKADQAE 2506
G RV IR++ A A + TPA + C+A + + ++ T + ++ S + LV + R + C E + L +L + A+ VA KG L R K L + + ++E+V V F + L T E ++ + V L RV IP +P IR+WYV R +V + C LGI ++ G E PR +VGL GP G GKSTVA+MVV + DV+ +F V+WL VG KGAK RLP LM LA V ET L++ PR+A + I + +D AA+IR G GD R+L+VADDV++ EVL EL GA V+YTTR + +RL+++ EEEAE +LRRA + LP A+ +++ + + + VGRWG +RG+ E+AW AL + GG W AVL AGL L N + +LY LA+LP GL F P+ A LL+ D +SA AAE +L LER S+L LEE G Y VH+ H FV DR +R AL RWR+++S+ AL + L +W +A++ G PY+A L+++ DD +L L R A FH D+ EA KY+ L+ + E +G D +A LH+LG + E+ + + E
Sbjct: 8 GVRVLTYIREFTAGAATLLQETPAVGIACKAYLAFEDLVQTATSNKLELSVLGELIDLV-----LQRYVKRCAEREQGVR-----QELLSLENHIKSAESVAGLCNGKG----LKRLKQLTLCRRICNEIESVRKNVLHFCTINNLVL-TSELSFKLDDVARLLEAQDQTLKAVMEKPGRVNIPSGAPSIRDWYVERVKVEAQICHHLGIGTSNGIPSFPEEQPR-----------------MVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVG-KGAKDRLPTLMFELAKTVRETVLQKMARR---------PREATVGI--NSEDGAAYIREEAGK-----------------GD-----TRFLVVADDVWDAEVLAELRRAGAWVIYTTRKAE-----------------------LFPETPAIRLEEVLEEEAEMMLRRAADLGEKTRLPPAAYELMRRCDFSVLDLALVGRWGKIRGRSCERAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEA-----VLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRQYISSVRALNTYSSAWLDKVWEKLAKVEGEGFV-RSPYNAALSAI--MDDSEGELLEALRRAAEFHFCRGDWSEAFDKYSELLLIKE---------------QTAGPDHPDVAKILHNLGMCACEVGREKETE 660
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: D7G5Y4_ECTSI (NB-ARC and TPR containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y4_ECTSI) HSP 1 Score: 258 bits (658), Expect = 4.220e-69 Identity = 198/538 (36.80%), Postives = 265/538 (49.26%), Query Frame = 2
Query: 773 RVAIPPRSPQIREWYVPRREVVQEACQRLGIYSAEGEA---GPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGACVLYTTRLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGV-PHAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLF-DRQEDSAANAAELESTLELLVLLERCSVLALEER-GRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTE 2368
RV IP +P IR+WYV R V + C LGI ++ G G +P +VGL GP G GKSTVA+MVV + DV+ +F V+WL VG KGAK RLP LM LA+ V ET L++ PR+A + I + +D AA+IR G GD R+L+VADDV++ EVL EL GA V+YTTR + G P +RL+++ EEEAE +LRRA + A LP A+ ++K A + + VGRWG +R + E AW AL + GG W AVL AGL L N + +LY LA+LP GL F P+ A LL+ D +SA AAE +L LER S+L LEE G Y VH+ H FV DR +R AL RWRR++S+ AL + L +W ++++ G PY+A L ++ DD +L L R A FH D+ EA KY+ L+ + E
Sbjct: 6 RVNIPSGAPSIRDWYVERVGVATQICHHLGIGTSNGIPSFPGEQPR---------------MVGLAGPGGAGKSTVASMVVTQVDVQAFFRGRVLWLSVG-KGAKDRLPALMFELANRVRETVLQKMARR---------PREATVGI--NSEDGAAYIREEAGK-----------------GD-----TRFLVVADDVWDAEVLGELRRAGAWVIYTTRKTELF-----PGTP------------------AIRLEEVLEEEAEMMLRRAADLGEQARLPPAAYELMKRCDFAVLDLALVGRWGNIRRRSCESAWRAALDSIIETQRAGGDGGQLLPWRAAVLRAGLGVLASDNPQTTELYYALALLPTGLAFPPEVALILLYGDDFSESALKAAEA-----VLGTLERLSILTLEENSGWYHVHENHVDFVLDRPLAKHYTRDTALPRWRRYISSVRALNTYSSAWLDKVWEKLSKVEGEGFV-RSPYNAALNAI--MDDSEGELLEALRRAAEFHFCREDWSEAFDKYSNLLLIKE 463
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: A0A6H5JL31_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL31_9PHAE) HSP 1 Score: 224 bits (571), Expect = 7.820e-56 Identity = 194/600 (32.33%), Postives = 276/600 (46.00%), Query Frame = 2
Query: 743 ERNRVGFLASRVAIPPRSPQIREWYVPRREVVQEACQRLGIYSAEGEAGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLVHETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGAC-VLYTTRLVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGVPH-AALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGGKRWTRRRWHTAVLFAGLADLGRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLFDRQEDSAANAAELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGE-AGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRLASISRTSNSGGGDRSGSDKLLLADHLHSLGCVSAELRKADQAEAAHARARSI 2533
E+ RV LAS V IP +P+IR+ +V R EV+ + C LGI E P VVGL G G GKSTVA+MV+ REDVR +F GV+WL VG + + RL EL+ LA +V+ET ++ P RK I D +D AA+I+ + RP RR+L+VADDV++ EVL EL VLYT+R + D P ++ LD L EEAE +LR A + A LP+ A+ +++ AA+ +++VGRW R + E AW AL + V+A G+ W AVL GL +L N ++LYL LAV+PRG F P AA LL+ S + E + LER S++ G YRVHD H F+R + +R L RWRR++S+ +AL + L + W +AE + GE +PY L + S + P L A F+ + A +++L+ + E +G D +++A LH LG +A++AE RA I
Sbjct: 13 EQRRVADLASTVRIPTTAPRIRDRFVERGEVISQVCSLLGI---EDHTTAYPAEMK------------VVGLAGAGGSGKSTVASMVIRREDVRAFFPGGVLWLSVGQRAGRDRLLELLTSLAGMVYETVFQKRCR---------PLRKGVIGT--DDEDPAAYIQCLQ-----VERP-----------------RRFLVVADDVWQTEVLDELRRASVWGVLYTSR--------NTDLLP---------------RAPVVLLDQLDREEAEMVLRNAAELAKDACLPEAAYDLMRRCEYAALDLDFVGRWSRTRRRTSELAWRGALDCI-VDAQTRGEGRLPLSWRAAVLHTGLEELAGENSANRELYLALAVIPRGQPFPPDVAAVLLYGDGR-SGEEKEDREEAKNIFETLERWSIITRVGGGWYRVHDEHTDFIRASFAANQHARNTTLIRWRRYMSSVSALVTLSEDWLSEGWNVLAE--AQGEPVPSQPYLEALGGLAPSSADR---PMALRTAASFYRDREQWMPASDYFSQLLIIQE---------------HTAGVDSVVVARTLHELGLCVYMSGRAEEAELRLKRALRI 519
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 215 bits (547), Expect = 9.470e-53 Identity = 181/555 (32.61%), Postives = 263/555 (47.39%), Query Frame = 2
Query: 782 IPPRSPQIREWYVPRREVVQEACQRLGIYSAEGEAGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLV-HETELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGACVLYTTR---LVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGVP-HAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAG-------DGGKRWTRRRWHTAVLFAGLADL--GRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLFDRQ-----EDSAANAAELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRLASIS 2389
IP +P + W+V R V++ + L +A G GP +VGL G +G GK+T A+ +V +VR F +GVVWL V GAK RLP LM +LA ++ E RR + + D AA+I+ EK GG+G + L+VAD+V+E EV+ +L+ G VL +TR LV G + G+++ +D++ E EAE++LR+A +P LP A +I+ G AM + +VGRW VRG+ D AW A +V E G G TR AVL AG DL G +++ + LYL LAVLP G GFT +DAA LL+DR+ E SAA E+ +L + C +A G Y +HD H+ F R+++ R AL RW R++S+ L + D+ D+W V ++ G RPY+A LA M+ SD LPT + VA+F D+ EA A RL+++ +++ S
Sbjct: 203 IPKATPIRKSWHVERLYVMERVFEAL---TAVG--GPH-----------------LVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVN-HGAKDRLPSLMLQLAHMMCEEVGGRRPATSD---------------------DGAAYIK------------------EKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVG------------------------SEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRG-GHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDP---LLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVTKVGPYS 667
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 199 bits (506), Expect = 1.050e-47 Identity = 171/554 (30.87%), Postives = 256/554 (46.21%), Query Frame = 2
Query: 782 IPPRSPQIREWYVPRREVVQEACQRLGIYSAEGEAGPRPXXXXXXXXXXXXXXXXVVGLGGPTGCGKSTVAAMVVAREDVRGYFYEGVVWLPVGGKGAKYRLPELMARLASLVHET---ELRRSGSGESWTPIPPPPRKACIAITPDRQDSAAFIRAVLGLVPLSPRPTGGSRGEKQGGDGGGRGRRYLIVADDVYEPEVLQELMGVGACVLYTTR---LVKGMRLGDPDGAPDGXXXXXXXXXXXXAAGDLLRLDDLREEEAETILRRACGV-PHAALPQTAHGMIKAYGSAAMHINYVGRWGVVRGKVDEKAWDMALSRVFVEAGDGG----------KRWTRRRWHTAVLFAGLADL--GRLNDKAKDLYLYLAVLPRGLGFTPQDAAALLFDRQ---EDSAANAAELESTLELLVLLERCSVLALEERGRYRVHDFHARFVRDRISCFPLSRMRALSRWRRHVSTAAALFAWPVEDLVDIWCNVAELTSPGEAGERPYDAVLASMDHSDDEASKLPTVLERVARFHALAADFGEAHAKYARLVELTESRL 2377
+P +P + W+V RR V + Q L + + GP +VGL G +G GK+T A+ +V+ VR F +G+VWLPV +G LP LM +LA +V E + R SG D A+++ + + G GG +G + L+VAD+V+E +V+ +L+ G +L +TR LVK A G+++ +D+L E EAE++LRRA + P A LP A +I+ G AM + +VGRW VRG+ D AW A +V E GG R RRR A+L AG DL G +++ + LYL LAVLP G FT +DAA LL+DR+ ED A+ +E+ LER +++ E YR+HD H+ F R+ + R A+ R R +S+ AL + L +W V + G A RPY+ L ++D S+ + +E VA F D+ A+ + RL+ + E +L
Sbjct: 203 VPKGTPTHKSWHVERRNVTETVFQAL-----DADGGPH-----------------LVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVN-EGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSD--------------------DGLAYVKQQV-----------------ENGHGG-KGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVK------------------------RANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRR---AILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEA-------LERWTIIRSVE-ATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFR--ETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQL 658 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig9.16460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig9.16460.1 >prot_C-linearis_contig9.16460.1 ID=prot_C-linearis_contig9.16460.1|Name=mRNA_C-linearis_contig9.16460.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1751bp MPSVWMPASSPASFFLSRLELRFRRPSLKLRQVADEASSSSSPAKPESSPback to top mRNA from alignment at C-linearis_contig9:181820..193711+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig9.16460.1 ID=mRNA_C-linearis_contig9.16460.1|Name=mRNA_C-linearis_contig9.16460.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11892bp|location=Sequence derived from alignment at C-linearis_contig9:181820..193711+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig9:181820..193711+ >mRNA_C-linearis_contig9.16460.1 ID=mRNA_C-linearis_contig9.16460.1|Name=mRNA_C-linearis_contig9.16460.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=10506bp|location=Sequence derived from alignment at C-linearis_contig9:181820..193711+ (Chordaria linearis ClinC8C monoicous)back to top |