mRNA_C-linearis_contig89.16442.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig89.16442.1
Unique NamemRNA_C-linearis_contig89.16442.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: D7FV97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV97_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 2.030e-69
Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = 1 
Query:   49 TQQAERAQRRVYMGPLNRFKFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDR 402
            T +AE+AQRRVYMGP+ RFKFQDAS+YLELAGQCFRVAKRFQDAGVAYKQCGRLE+KLNNPEVAASFYHEAALCFQKDDPQEA ACYL+AINLFCQR+ FSTAARLECEVAELMQNDR
Sbjct:    2 TNEAEKAQRRVYMGPMARFKFQDASNYLELAGQCFRVAKRFQDAGVAYKQCGRLEEKLNNPEVAASFYHEAALCFQKDDPQEAAACYLSAINLFCQRQLFSTAARLECEVAELMQNDR 119
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BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: J3JV91_DENPD (Uncharacterized protein n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=J3JV91_DENPD)

HSP 1 Score: 118 bits (296), Expect = 1.510e-27
Identity = 83/276 (30.07%), Postives = 135/276 (48.91%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDR-NRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGM-PEPAPDVHHRKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWYLRILKKI 927
            + +DA    + A   F++AK +  AG A+ +   L  +      AA+ Y +AA C++K +  EAV CYL AI L+    RFS AA+    +AE+ + +  +   A+ H+ +AAD+ R     + + ++C LK +  A  L   E+Y +A  ++QEV    L   LLK++  D FF+AALC  C   +  + A D + ++Y A                         FQ SR Y F   +    ++ +VD F   +  Y+N+ RLD WY  +L ++
Sbjct:   34 RVEDAVECYQRAANLFKMAKNWVSAGSAFCEAATLHLRSGARHEAATNYVDAANCYKKSNINEAVTCYLKAIELYTDMGRFSIAAKHHQNIAEVYETESIDIDKAVQHYEQAADYFRGEES-NSSANKCYLKVAQYAAQL---ENYAKAIQIYQEVATNSLESSLLKYSAKDYFFRAALCQLCIDHLNAQHALDRYLQQYPA-------------------------FQDSREYKFIKALIEQIEEQNVDGFTEAVKDYDNISRLDPWYTTLLLRV 280
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BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: UPI000771B9EF (alpha-soluble NSF attachment protein n=2 Tax=Hymenoptera TaxID=7399 RepID=UPI000771B9EF)

HSP 1 Score: 115 bits (289), Expect = 1.560e-26
Identity = 81/284 (28.52%), Postives = 139/284 (48.94%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDR-NRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGMPEPAPDVHH--RKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWY----LRILKKIGDH 936
            K ++A    + AG  F+VAK++  AG A+ +   L  K  +   AA+ Y +AA C++K DP EAV C L AI ++    RF+ AA+    +AE+ +++  +   A+ H+ +AAD+ R     + + ++CLLK +  A  L   E+Y  A  ++++V    L   LLK++  + FF+A LC  C   +     +  H   +Y  + P                      FQ SR Y     +    ++ +++ F   +  Y+++ RLD WY    LRI K++ D+
Sbjct:   35 KVEEAVDCYQRAGISFKVAKKWGAAGNAFCEAANLHSKAGSRHDAATNYVDAANCYKKSDPNEAVNCLLKAIEIYTDMGRFTMAAKHHQTIAEMYESESVDLERAVHHYEQAADYFRGEES-NSSANKCLLKVAQYAAQL---ENYDRAIQIYEDVASSSLESSLLKYSAKEYFFRAGLCQLCVDVL-----NAQHAIERYSEQYP---------------------AFQDSREYKLLKTLIEHVEEQNLEGFTEAVKEYDSISRLDQWYTTVLLRIKKQVNDN 288
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BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: A0A7M7QDW3_NASVI (Uncharacterized protein n=2 Tax=Chalcidoidea TaxID=7422 RepID=A0A7M7QDW3_NASVI)

HSP 1 Score: 114 bits (286), Expect = 4.130e-26
Identity = 80/284 (28.17%), Postives = 138/284 (48.59%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDR-NRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGMPEPAPDVHH--RKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWY----LRILKKIGDH 936
            K ++A    + A    +++K++  AG A+ Q   L  K  +   AA+ Y +AA C++K DP EAV C L AI ++    RF+ AA+    +AE+ +ND  +   A+ H+ +AAD+ R     + + ++CLLK +  A  L   E Y +A  ++++V    L   LLK++  + F +AALC  C   +     +  H   +Y+ + P                      FQ +R Y     +    ++ +++ F   +  Y+++ RLD WY    LRI K+I D+
Sbjct:   34 KVEEAVESYQRAANLLKMSKKWGGAGNAFCQAATLNAKAGSKHDAATNYVDAANCYKKSDPTEAVNCLLKAIEIYTDMGRFTMAAKHHQSIAEIYENDELDLERAVQHYEQAADYFRGEES-NSSANKCLLKVAQYAALL---EKYEKAIQIYEQVAASSLESSLLKYSAKEYFLRAALCHLCVDVL-----NAQHAIERYQEQCP---------------------AFQDAREYKLIKTLIEHLEEQNMEGFTEAVKDYDSISRLDQWYTTMLLRIKKQINDN 287
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BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: A0A067RAR1_ZOONE (Soluble NSF attachment protein n=10 Tax=Polyneoptera TaxID=33341 RepID=A0A067RAR1_ZOONE)

HSP 1 Score: 114 bits (284), Expect = 8.160e-26
Identity = 82/284 (28.87%), Postives = 139/284 (48.94%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDR-NRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGMPEPAPDVHH--RKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWY----LRILKKIGDH 936
            K ++A    + A   F++AK++  AG A+ +   L  K  N   AA+ Y +AA CF+K DP EAV+  L AI ++    RF+ AA+    +AEL + +  +   A+ H+ +AAD+ +     + + ++C+LK +  A  L   E+Y +A  ++++V    L   LLK++  + FF+AALC  C   +     +  H   +Y+   P                      FQ SR Y     +    ++ +VD F   +  Y+++ RLD WY    LRI K++ D+
Sbjct:   35 KVEEAVDCYQRAANMFKMAKKWGSAGNAFCEAATLHAKAGNKHDAATNYVDAANCFKKSDPNEAVSSLLKAIEIYTDMGRFTMAAKHHQSIAELYETEAVDLDRAVQHYEQAADYFKGEES-NSSANKCMLKVAQYAAQL---ENYDKAIQIYEQVASSSLESSLLKYSCKEYFFRAALCHLCVDVL-----NAQHALERYQELYP---------------------AFQDSREYKLLKVLIDHMEEQNVDGFTEAVKDYDSISRLDQWYTTILLRIKKQVNDN 288
[Close]
BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: A0A8J2PSE6_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2PSE6_9HEXA)

HSP 1 Score: 114 bits (284), Expect = 1.530e-25
Identity = 79/275 (28.73%), Postives = 135/275 (49.09%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDRNRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGM-PEPAPDVHHRKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWYLRILKKI 927
            K  +A    + A   F+++K++ +AG A+ + G L  K  +    A+ Y +AA C++K DP+EAVAC   AI  + +  RFS AA+    +AE ++ + +   AI H+ +AAD+ +     + A ++ LLK +   HA  L E+YV+A  ++++V    L   LLK++  + FF+A +C  C   +  + A D +   Y A                         FQ SR Y     +A   +  D + +   +  Y+++ RLD WY  +L +I
Sbjct:   36 KVDEAIECYQRAANMFKMSKKWGNAGEAFCKAGELHLKNGSRHDCATAYVDAATCYKKSDPKEAVACLEKAIEQYLEMGRFSLAAKHHQAIAETLEAEADLEKAIHHYEQAADYFKGEES-NAAANKALLKVAQ--HAAQL-ENYVKAIKVYEDVAASSLESSLLKYSAKEYFFRAGICHLCVDVLNAQQALDRYIEMYPA-------------------------FQDSREYKLIKTLAEHVEHEDAEAYTEAVKDYDSISRLDQWYTTLLLRI 281
[Close]
BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: A0A1X2HTJ4_SYNRA (Soluble NSF attachment protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HTJ4_SYNRA)

HSP 1 Score: 112 bits (280), Expect = 2.990e-25
Identity = 91/284 (32.04%), Postives = 134/284 (47.18%), Query Frame = 1 
Query:   82 YMGPLNRFKFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAAS-FYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDRN-RRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGMPEPAPDVHHRKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWYLRILKKI 927
            ++GP N  K++DA+   E AG  F++A+++ +AG A+K+  +L  +        S  Y  AA C++++DP  AVA    AI L  +   F  AAR   EVAEL +N+ N  + A   + KAAD   A+       ++C LK ++ A  L   E Y  A   F+ V    + D LLK++  + FFKAALC  C                         T+ S +A     G   S F+ +R Y     +  A    DVD F   +Y Y+ + RLD+W   IL KI
Sbjct:   27 FIGPSN--KYEDAAELYEKAGNMFKLAQQWTNAGDAFKEAAKLFQRAGGANFDGSRAYENAAKCYKRNDPHAAVASLREAITLDHEGGNFRQAARHFQEVAELYENELNDSKGAYDAYEKAADLFSADDS-PAMANKCFLKVAEIAADL---EMYEVAIEKFERVASAAVDDNLLKWSLKEYFFKAALCHMCTED----------------------TVRSRQALSSYCGMDMS-FESTREYQMLKGVLDAIDNDDVDQFTQAVYDYDKLTRLDSWKTSILLKI 281
[Close]
BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: H2XQ34_CIOIN (Uncharacterized protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=H2XQ34_CIOIN)

HSP 1 Score: 110 bits (276), Expect = 1.210e-24
Identity = 84/279 (30.11%), Postives = 129/279 (46.24%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDR-NRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQC--ASGMPEPAPDVHH--RKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWYLRILKKI 927
            K +DA      AG  F++ K++ +AG A+++   + +KL N   +AS   +AA C++K +P++A+ C   AI++F    RF+ AA+    +AEL + D  N   AI H+ KAAD+         A ++C LK   AA+A  L + Y +A  L++ V    +   LLK+   +  FKA LC  C   SG+     D      KYE   P                      F+ SR       +  A +    D FA  +  Y+ V R+D W   IL +I
Sbjct:   35 KLEDACDKYVKAGNLFKMGKKWSEAGAAFRKSADIREKLANKHESASNLVDAAGCYKKSEPEQAITCLARAIDIFTDMGRFTIAAKHHMSIAELYEADALNIEKAIAHYEKAADYYDGEDSKSSA-NKCWLKV--AAYAAQL-QQYTKAIELYERVALTSIESPLLKYAAKEYMFKATLCQFCLGCSGV-----DARQAIEKYEEWMP---------------------AFEDSRECKLVKKLIEAYENNSADGFAEAIAEYDKVTRIDEWLTTILLRI 283
[Close]
BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: UPI001ED8BD67 (alpha-soluble NSF attachment protein n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8BD67)

HSP 1 Score: 110 bits (276), Expect = 1.410e-24
Identity = 82/293 (27.99%), Postives = 135/293 (46.08%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQ------------NDRNRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGMPEPAPDVHHRKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWY----LRILKKIGDH 936
            K +DA    + A   F++ K++  AG A+ +   L  K  +   AA+ Y +AA C++K DP +AV C L AI ++    RF+ AA+    +AEL +            N+ +   AI H+ +AAD+ R     + + ++CLLK +  A  L   E Y +A  ++++V    L + LLK++  + FF+AALC  C                          L + +  +         FQ SR       +    ++ DV+ F   +  Y+++ RLD WY    LRI K+I D+
Sbjct:   35 KVEDAIECYQRAANTFKMGKKWAAAGNAFCEAAALHAKAGSRHDAATSYVDAANCYKKSDPNDAVTCLLKAIEIYTDMGRFTLAAKHHQSIAELYEGGDCGAGGGTGGNNADLDRAISHYEQAADYFRGEES-NSSANKCLLKVAQYAAQL---EKYEKAVQIYEQVASSSLENSLLKYSAREYFFRAALCHLCID------------------------LVNAQQAVQRYQDLYPAFQDSRECKLLKVLMDHMEEEDVEAFTEAVKEYDSISRLDQWYTTMLLRIKKQINDN 299
[Close]
BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Match: A0A894Z0C0_COCSE (Alpha-soluble NSF attachment protein n=2 Tax=Coccinellini TaxID=263631 RepID=A0A894Z0C0_COCSE)

HSP 1 Score: 108 bits (269), Expect = 1.130e-23
Identity = 79/276 (28.62%), Postives = 133/276 (48.19%), Query Frame = 1 
Query:  106 KFQDASHYLELAGQCFRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAVACYLAAINLFCQRRRFSTAARLECEVAELMQNDR-NRRLAIVHHIKAADFCRANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELLKFNTPDAFFKAALCLQCASGM-PEPAPDVHHRKYEAEAPPPRPTLNSVKATIVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDAWYLRILKKI 927
            + +DA    + AG  F++AK +  AG A+ +   L  +      AA+ Y +AA C++K D  EAV+C + AI ++    RF+ AA+    +AE+   D  +   A+ H+ +AAD+ R     + + ++CLLK +  A  L   E+Y +A  +++EV    L   LLK++  +  F+AALC  C   +  + A + + + Y A                         FQ SR Y     +    ++ ++D F   +  Y++V RLD WY  IL +I
Sbjct:   35 RVEDAIECYQRAGNLFKMAKNWPQAGSAFCETANLHLRAGARHDAATNYVDAANCYKKSDINEAVSCLMKAIEIYTDMGRFTMAAKHHQTIAEMYDTDAVDLERAVQHYEQAADYFRGEES-NSSANKCLLKVAQYAAQL---ENYEKAIQIYEEVATSALESSLLKYSAKEYLFRAALCHLCVDLLNAQHALERYIQMYPA-------------------------FQDSREYKLIKVLIEHMEEQNLDGFTDAVKDYDSVSRLDQWYTTILLRI 281
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV97_ECTSI2.030e-6990.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
J3JV91_DENPD1.510e-2730.07Uncharacterized protein n=2 Tax=Dendroctonus ponde... [more]
UPI000771B9EF1.560e-2628.52alpha-soluble NSF attachment protein n=2 Tax=Hymen... [more]
A0A7M7QDW3_NASVI4.130e-2628.17Uncharacterized protein n=2 Tax=Chalcidoidea TaxID... [more]
A0A067RAR1_ZOONE8.160e-2628.87Soluble NSF attachment protein n=10 Tax=Polyneopte... [more]
A0A8J2PSE6_9HEXA1.530e-2528.73Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A1X2HTJ4_SYNRA2.990e-2532.04Soluble NSF attachment protein n=1 Tax=Syncephalas... [more]
H2XQ34_CIOIN1.210e-2430.11Uncharacterized protein n=2 Tax=Ciona intestinalis... [more]
UPI001ED8BD671.410e-2427.99alpha-soluble NSF attachment protein n=1 Tax=Ischn... [more]
A0A894Z0C0_COCSE1.130e-2328.62Alpha-soluble NSF attachment protein n=2 Tax=Cocci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:681844..685983 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score123.2
Seed ortholog evalue2.2e-25
Seed eggNOG ortholog400682.PAC_15717606
Preferred nameNAPA
KEGG koko:K15296
KEGG Pathwayko04138,ko04721,map04138,map04721
Hectar predicted targeting categoryother localisation
GOsGO:0000149,GO:0000278,GO:0000281,GO:0000910,GO:0001505,GO:0001654,GO:0001671,GO:0001745,GO:0002009,GO:0002090,GO:0002165,GO:0003674,GO:0005483,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006891,GO:0006897,GO:0006900,GO:0006901,GO:0006903,GO:0006906,GO:0006996,GO:0007049,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007274,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008047,GO:0008104,GO:0008150,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010646,GO:0010807,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016079,GO:0016082,GO:0016192,GO:0017156,GO:0017157,GO:0017158,GO:0019222,GO:0019905,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023052,GO:0023061,GO:0030100,GO:0030154,GO:0030182,GO:0030234,GO:0030424,GO:0031090,GO:0031201,GO:0031323,GO:0031410,GO:0031629,GO:0031982,GO:0032386,GO:0032501,GO:0032502,GO:0032781,GO:0032879,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033267,GO:0034214,GO:0034613,GO:0034622,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035249,GO:0035295,GO:0035494,GO:0036465,GO:0040007,GO:0042886,GO:0042995,GO:0043005,GO:0043085,GO:0043195,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043462,GO:0043624,GO:0043679,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0044877,GO:0045026,GO:0045055,GO:0045176,GO:0045184,GO:0045202,GO:0046903,GO:0046907,GO:0046928,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048259,GO:0048284,GO:0048488,GO:0048489,GO:0048513,GO:0048526,GO:0048563,GO:0048569,GO:0048589,GO:0048592,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050804,GO:0051046,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051301,GO:0051336,GO:0051345,GO:0051588,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060560,GO:0060562,GO:0060589,GO:0060590,GO:0060627,GO:0061024,GO:0061025,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070044,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090114,GO:0090174,GO:0090596,GO:0097458,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098772,GO:0098793,GO:0098796,GO:0098805,GO:0098916,GO:0099003,GO:0099177,GO:0099500,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0120025,GO:0120038,GO:0140029,GO:0150034,GO:1902803,GO:1903047,GO:1903305,GO:1903530,GO:2000300
EggNOG free text desc.Attachment Protein
EggNOG OGs38GSG@33154,3BECS@33208,KOG1586@1,KOG1586@2759
Ec32 ortholog descriptionNSF attachment protein
Ec32 orthologEc-14_000280.1
COG Functional cat.U
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons9
Model size985
Cds size984
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930699.4988337-CDS-C-linearis_contig89:681843..6819001622930699.4988337-CDS-C-linearis_contig89:681843..681900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 681844..681900 +
1690881203.8082712-CDS-C-linearis_contig89:681843..6819001690881203.8082712-CDS-C-linearis_contig89:681843..681900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 681844..681900 +
1622930699.524928-CDS-C-linearis_contig89:682212..6823241622930699.524928-CDS-C-linearis_contig89:682212..682324Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 682213..682324 +
1690881203.819808-CDS-C-linearis_contig89:682212..6823241690881203.819808-CDS-C-linearis_contig89:682212..682324Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 682213..682324 +
1622930699.5482204-CDS-C-linearis_contig89:682717..6828401622930699.5482204-CDS-C-linearis_contig89:682717..682840Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 682718..682840 +
1690881203.8288686-CDS-C-linearis_contig89:682717..6828401690881203.8288686-CDS-C-linearis_contig89:682717..682840Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 682718..682840 +
1622930699.5620062-CDS-C-linearis_contig89:683408..6835171622930699.5620062-CDS-C-linearis_contig89:683408..683517Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 683409..683517 +
1690881203.837874-CDS-C-linearis_contig89:683408..6835171690881203.837874-CDS-C-linearis_contig89:683408..683517Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 683409..683517 +
1622930699.573931-CDS-C-linearis_contig89:683842..6839481622930699.573931-CDS-C-linearis_contig89:683842..683948Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 683843..683948 +
1690881203.8470092-CDS-C-linearis_contig89:683842..6839481690881203.8470092-CDS-C-linearis_contig89:683842..683948Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 683843..683948 +
1622930699.586657-CDS-C-linearis_contig89:684548..6846081622930699.586657-CDS-C-linearis_contig89:684548..684608Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 684549..684608 +
1690881203.8567283-CDS-C-linearis_contig89:684548..6846081690881203.8567283-CDS-C-linearis_contig89:684548..684608Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 684549..684608 +
1622930699.6060503-CDS-C-linearis_contig89:684864..6849661622930699.6060503-CDS-C-linearis_contig89:684864..684966Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 684865..684966 +
1690881203.8669074-CDS-C-linearis_contig89:684864..6849661690881203.8669074-CDS-C-linearis_contig89:684864..684966Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 684865..684966 +
1622930699.6230495-CDS-C-linearis_contig89:685345..6855871622930699.6230495-CDS-C-linearis_contig89:685345..685587Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 685346..685587 +
1690881203.8851082-CDS-C-linearis_contig89:685345..6855871690881203.8851082-CDS-C-linearis_contig89:685345..685587Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 685346..685587 +
1622930699.6414242-CDS-C-linearis_contig89:685910..6859831622930699.6414242-CDS-C-linearis_contig89:685910..685983Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 685911..685983 +
1690881203.896566-CDS-C-linearis_contig89:685910..6859831690881203.896566-CDS-C-linearis_contig89:685910..685983Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 685911..685983 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16442.1prot_C-linearis_contig89.16442.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig89 681844..685983 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig89.16442.1

>prot_C-linearis_contig89.16442.1 ID=prot_C-linearis_contig89.16442.1|Name=mRNA_C-linearis_contig89.16442.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=328bp
MADHMITTYREKAEKWTQQAERAQRRVYMGPLNRFKFQDASHYLELAGQC
FRVAKRFQDAGVAYKQCGRLEDKLNNPEVAASFYHEAALCFQKDDPQEAV
ACYLAAINLFCQRRRFSTAARLECEVAELMQNDRNRRLAIVHHIKAADFC
RANTCFDEATDRCLLKASDAAHALGLGESYVEAATLFQEVGRRMLVDELL
KFNTPDAFFKAALCLQCASGMPEPAPDVHHRKYEAEAPPPRPTLNSVKAT
IVALGKASSVFQGSRAYMFATDMASAEKKGDVDFFASRMYAYNNVVRLDA
WYLRILKKIGDHVQAKAVKLRKLKTMQA
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mRNA from alignment at C-linearis_contig89:681844..685983+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig89.16442.1 ID=mRNA_C-linearis_contig89.16442.1|Name=mRNA_C-linearis_contig89.16442.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4140bp|location=Sequence derived from alignment at C-linearis_contig89:681844..685983+ (Chordaria linearis ClinC8C monoicous)
ATGGCGGATCATATGATCACGACGTATCGGGAGAAAGCTGAAAAATGGAC
CCAGCAGGTAACCTGTTGCGTCGGATCTTTCACGAAGATATGAGATAAAT
CTTTCGGATCGAATGCTTTCCTCGCCGACAGTACTCTACCATCTACGGCG
GACATGCCTCTGTCCTGCTGGCGATCGCTACTTCTGCTTACCGATATATT
GTCTTGCAAGGTTTCCCGTCTCCCTACGAAAGTACGTGAGCTTTGTACCC
TCCGAGCGACCTTCTAAGTCTCACCACGTGAACGAGAGCAATAAGCCGCA
TGATCATACAAGTACATCTTCTCTCTGTCGGCGCATCTTGCATAATTTGC
ATTTTTCTCTCGACACCAGGCTGAGAGGGCGCAGCGGCGAGTGTACATGG
GACCATTGAACCGGTTCAAGTTCCAAGATGCATCCCACTACCTGGAGCTG
GCCGGGCAGTGCTTCCGAGTTGCCAAACGATGTGAGTCCACGCTACGCTC
TCCGGCAGCAAAATGGTTGGTTGCCATGTTGTGCAGTCTCGGGGTGAAAA
CATGCGACCCGCTTACCATAAGAAGTCGAGGTAGATGACGAGTGTACACC
AGGCGAAACACATATCTATGTAAATGAGCAAGATAGTATTTCGCGCGACT
ACACGTTTGAAACCATAACTCACCACGGCTTGAAATGGACTCAATCATGC
TGCGCGGTCGTCGCCTGTCCGCGATGTTCGTAAGGTACGGCTTGCAGTAC
TTGTTGTACAAAACAACCTCGCTCAAAATATTATGGGACTTTGCGGAATG
TAGATCTATACAATCCTATTTCACGGCTTTTTGTTGGGGCGGTTCACCGG
TAAATGCTTCTTGTTCGGTGGAAGTCCAAGATGCCGGAGTGGCTTACAAG
CAATGCGGTCGGTTGGAGGACAAGCTAAATAATCCGGAGGTGGCGGCATC
GTTCTACCACGAAGCGGCCCTCTGCTTCCAGAAAGATGACCCACAAGGTA
TCACCGCCCGTGGCAGCAGTACCTTATACTCGGAGTATAACTCGCGCTCC
GTACCACCTTCACCATAATATAGATCACCTTGTGTTGTAGAGCCTTTTTT
GTAGACTACGTTTTACATAGAAGTACGGAGTGTAGTCAAGTCTACGTTAA
TCACCGTCGGCACGTCGTCTCATACTGGAAGTTCACAAGGCAGTATAGTG
AAAAGGGCAACAAGCGGCAGGTTGGCCATATGATAGCTGCAGCCACATTT
CAATTTCGCGATCAATCAAGAGAAAAGGATTTGAGCCTATGACTTCTCGC
TCCCAAAGCGAGCACGCTATTATACCAAAACTTATGAAGTTTATAATTTT
TGGTTTGTAAAATTTCTTTTTGAAGGCCCGCTGGACAAAATGCGAACATG
TTGTTACATTTTCAACAAAAAAAAGCGCAATTCCAACCCTATCTATCTGT
AAGCTGCCAGCAAATACTCAAAAGGTCCCTTTTCTGTTATCTTACAGCTC
TGTGTTATTTGATGGCTCTTGCTTTTGTGTTGACCCTCGCTATGGATTCT
GTCGCTGCGATATAGAGGCCGTTGCTTGCTACCTGGCCGCCATCAACCTC
TTCTGCCAAAGACGACGATTTTCCACGGCAGCACGGCTAGAATGCGAGGT
GGCTGAGCTGATGCAGAACGACAGGTACCTCTATTTAGACTACTCGGTTT
GGACAGGGTTTTCACGCTATGGCTTGTGAAATCATTGAACGTGTTCAGTT
TCTCTAGAAGGGAATCACTCACATCCGTACCGTGGCTAGCGGAAGTTCCT
GGAAAATTCAAACCACCAGGACGGGCAGCGAGGTGGTAACTTTATTGATT
AAGTCAAGGGCCAAACACTTTTATGAATACATGGGGCAAATATGTGGGAC
TTAGCTTGAGCAATGCTCGATCTTGACGAAAGGAGAAACCTCACAGTTGA
CCTATTTTTCTTCTTCTGTCGGCCTCCATTTGTGTCTTTCCCCCATCAGA
AACCGACGGTTGGCAATCGTGCACCATATCAAGGCGGCTGATTTCTGCCG
AGCAAACACATGCTTCGACGAGGCGACCGATCGGTGCCTCCTCAAGGCAA
GCGACGTGATGCACAAATTCAATTTCATTGGCTCTCGTCAGGATAATGAT
GTCTACGTTTAGACTATCGATCATGCGGTTGGTGGTGTCAAACGTACGTC
AAACAAACATGTTGTATGTGTTTTGTTCGCCAAAGCCCGAACGAACGCGA
ACGCAAGTTCCTTGTCTTATCGCCAATTTTGCTATTTTGGTGACCATATC
CTGGTCTTGAGGAAAGGATAAAGCACAGACTATCGGGCAAGGCCGAGGAA
AATGGCATGCAGCACACCTCGGGACTCGACGGTCGAAGTTGCAACACTGA
CCGTGATCTGTCTCATTCTCATGAAGCAGTCCGGCGGACATGGCGAAGAT
GTACGCAATTTTATCTGGCAAAATTCCATCCCATTGGCGAACCGCCTCGG
TTTAACTACCTGCAGTTGCCTGTTTTTGAGCTACACAACCCAACACTACA
GGAAGCCTTCAGCTACCTGTGTTTCGAATCGGTTATGTGAGCCTCGTCGA
CTAACATTTTGGAAGGCATTGCTGCTGGGCTCCAGCGCTTGACGCTCAAC
GTCGGGCGTACTTGCCGCTTGCTTGATGACCCAACATGGTTGACCGTCCT
CTCAGGCCGCCCACGCGCTTGGCCTGGGCGAAAGCTACGTCGAAGCAGCT
ACTCTGTTCCAGGAGGTGAGGCCGAAATGGCGCACACACGCATATGATTT
ATCGCAGAATAAGTTATCGCCGTACATCATGCAACCCTCGGCACCGAATG
GTTTAACACGTTTCTGAGGCCCCTGCACCGCACACACACACACACACACA
CACACACACACACACGCCGATGTCGATGCAACATAATTTGCAGCCTGCGC
GACGGCGTGGCCCGTTTCAAATCGCAACGTGACCCGGAGGCAACGGCGCG
CAACTCAATAACCTTGACCAGGTCGGCCGCAGAATGCTGGTTGATGAGTT
GCTCAAGTTCAACACCCCCGACGCATTTTTCAAGGCCGCCCTGTGCCTGC
AGTGTGCGAGTGGAATGCCTGAGGTGAGACAGGCAATTGCAGCAGGATCT
ATCGGCCGATCAATGGTGCTAAAGCTTTGTTGGTATGGGCCTCGGCTCTG
CACGGCAGTTCAAGTTTTTGTCAATAATTCTTCCGGCCAACGAAGCACGT
CCTCCCTACGCCGAAGGTGGTAAACAAGATCGATCCAAAATAGAAACCCA
CTCGAAGCAATCCCTCACCAAGCATTGCTGCACCAACAGAGCGAAAACAC
GTTGAGGAACCTCGCGTTCCCGCTCTTACTCCTGCGTGATCCCCGCTCAG
AGCTTGAAAGACACAAGGTGCATCTATACGCCACCCCCTGACATCTCAAC
AACGGCACGGTGCATGGTTTGTGAATGCCTCCGGGTTATGTTATCCCTTT
AGCCAGCCCCCGACGTCCACCACAGAAAATACGAGGCCGAGGCTCCGCCG
CCGCGCCCAACGCTTAACTCCGTGAAAGCGACGATAGTGGCGCTGGGCAA
GGCTAGCTCCGTATTCCAAGGGTCGAGGGCCTACATGTTCGCGACGGATA
TGGCTTCCGCCGAGAAGAAAGGGGACGTGGACTTCTTCGCGTCGAGGATG
TACGCGTACAACAACGTCGTCCGCCTTGACGCGTGGTACCTGCGGTGAGA
AGTAGGCGATTCCGGCGATCCTCCTCAGCAGAGAGGTGTAAGTATAGGGA
ACGATGGTGGGGGGGGGGGGGGGGCCAGTGCGTACGGTTTCCGTAGTTTT
TTGTCGTCATCAAACCGAATGTTTGGCCCCTGGATACAGCTTTGCATGCG
TGGTCCATTCTGAAGTGACGAACACACGCCTCTCCTGGAGAGCTCTTGAT
AGCAATACGAGAGAGGGACAGCCGTCGGCGGTGGCCTGTAGTGAGGGGCT
GAAGCTTCAGCCTCCTAGTACCAGCCCTTCATGCTTTCGCGCGGCGTTGG
TATACCTTCCGTGGCAGCATCCTGAAGAAGATTGGCGACCACGTCCAGGC
TAAAGCCGTCAAGCTGCGGAAACTAAAAACGATGCAGGCG
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Coding sequence (CDS) from alignment at C-linearis_contig89:681844..685983+

>mRNA_C-linearis_contig89.16442.1 ID=mRNA_C-linearis_contig89.16442.1|Name=mRNA_C-linearis_contig89.16442.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1968bp|location=Sequence derived from alignment at C-linearis_contig89:681844..685983+ (Chordaria linearis ClinC8C monoicous)
ATGGCGGATCATATGATCACGACGTATCGGGAGAAAGCTGAAAAATGGAC
CCAGCAGATGGCGGATCATATGATCACGACGTATCGGGAGAAAGCTGAAA
AATGGACCCAGCAGGCTGAGAGGGCGCAGCGGCGAGTGTACATGGGACCA
TTGAACCGGTTCAAGTTCCAAGATGCATCCCACTACCTGGAGCTGGCCGG
GCAGTGCTTCCGAGTTGCCAAACGATGCTGAGAGGGCGCAGCGGCGAGTG
TACATGGGACCATTGAACCGGTTCAAGTTCCAAGATGCATCCCACTACCT
GGAGCTGGCCGGGCAGTGCTTCCGAGTTGCCAAACGATTCCAAGATGCCG
GAGTGGCTTACAAGCAATGCGGTCGGTTGGAGGACAAGCTAAATAATCCG
GAGGTGGCGGCATCGTTCTACCACGAAGCGGCCCTCTGCTTCCAGAAAGA
TGACCCACAAGTCCAAGATGCCGGAGTGGCTTACAAGCAATGCGGTCGGT
TGGAGGACAAGCTAAATAATCCGGAGGTGGCGGCATCGTTCTACCACGAA
GCGGCCCTCTGCTTCCAGAAAGATGACCCACAAGAGGCCGTTGCTTGCTA
CCTGGCCGCCATCAACCTCTTCTGCCAAAGACGACGATTTTCCACGGCAG
CACGGCTAGAATGCGAGGTGGCTGAGCTGATGCAGAACGACAGAGGCCGT
TGCTTGCTACCTGGCCGCCATCAACCTCTTCTGCCAAAGACGACGATTTT
CCACGGCAGCACGGCTAGAATGCGAGGTGGCTGAGCTGATGCAGAACGAC
AGAAACCGACGGTTGGCAATCGTGCACCATATCAAGGCGGCTGATTTCTG
CCGAGCAAACACATGCTTCGACGAGGCGACCGATCGGTGCCTCCTCAAGG
CAAGCGACAAACCGACGGTTGGCAATCGTGCACCATATCAAGGCGGCTGA
TTTCTGCCGAGCAAACACATGCTTCGACGAGGCGACCGATCGGTGCCTCC
TCAAGGCAAGCGACGCCGCCCACGCGCTTGGCCTGGGCGAAAGCTACGTC
GAAGCAGCTACTCTGTTCCAGGAGGCCGCCCACGCGCTTGGCCTGGGCGA
AAGCTACGTCGAAGCAGCTACTCTGTTCCAGGAGGTCGGCCGCAGAATGC
TGGTTGATGAGTTGCTCAAGTTCAACACCCCCGACGCATTTTTCAAGGCC
GCCCTGTGCCTGCAGTGTGCGAGTGGAATGCCTGAGGTCGGCCGCAGAAT
GCTGGTTGATGAGTTGCTCAAGTTCAACACCCCCGACGCATTTTTCAAGG
CCGCCCTGTGCCTGCAGTGTGCGAGTGGAATGCCTGAGCCAGCCCCCGAC
GTCCACCACAGAAAATACGAGGCCGAGGCTCCGCCGCCGCGCCCAACGCT
TAACTCCGTGAAAGCGACGATAGTGGCGCTGGGCAAGGCTAGCTCCGTAT
TCCAAGGGTCGAGGGCCTACATGTTCGCGACGGATATGGCTTCCGCCGAG
AAGAAAGGGGACGTGGACTTCTTCGCGTCGAGGATGTACGCGTACAACAA
CGTCGTCCGCCTTGACGCGTGGTACCTGCGCCAGCCCCCGACGTCCACCA
CAGAAAATACGAGGCCGAGGCTCCGCCGCCGCGCCCAACGCTTAACTCCG
TGAAAGCGACGATAGTGGCGCTGGGCAAGGCTAGCTCCGTATTCCAAGGG
TCGAGGGCCTACATGTTCGCGACGGATATGGCTTCCGCCGAGAAGAAAGG
GGACGTGGACTTCTTCGCGTCGAGGATGTACGCGTACAACAACGTCGTCC
GCCTTGACGCGTGGTACCTGCGCATCCTGAAGAAGATTGGCGACCACGTC
CAGGCTAAAGCCGTCAAGCTGCGGAAACTAAAAACGATGCAGGCGCATCC
TGAAGAAGATTGGCGACCACGTCCAGGCTAAAGCCGTCAAGCTGCGGAAA
CTAAAAACGATGCAGGCG
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