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Homology
BLAST of mRNA_C-linearis_contig89.16434.1 vs. uniprot
Match: D7FVA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA5_ECTSI) HSP 1 Score: 192 bits (487), Expect = 6.460e-52 Identity = 109/164 (66.46%), Postives = 122/164 (74.39%), Query Frame = 1
Query: 25 MAEGFTAVDYATDVRLSEVKGKRLWLVRVPRHIDPARLEGAKVKLPVRKGREGKVLGRVTKAGDDGD-DIDQEDGGEGEEDLVVRAADVAESAGFRALFSADEDRPLIAAGPFAGQLNVSVETADLEPVGLEDHAPVATFVEPYRGRPQLKGMRVRSKPAGAGS 513
MAEGFTA DY T + LSEV+GKRLWL+RVPRHID +RLEG KVKLP RKGREGKVLGR K D D D D+E G EDL +RA DVAE+ GFRALFSA ED L AA PF GQ+NVSV+ D++ + V TFVEPY+GRPQLKGMRVR KPA AGS
Sbjct: 1 MAEGFTAADYVTSLPLSEVQGKRLWLLRVPRHIDTSRLEGVKVKLP-RKGREGKVLGRANKRNDSEDGDSDEEGGNRDGEDLALRAGDVAETHGFRALFSAKEDGALAAAPPFVGQVNVSVDMPDVDASVADGDPRVDTFVEPYQGRPQLKGMRVRYKPARAGS 163
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | DNA-directed RNA polymerase I, subunit RPA34.5 |
| Ec32 ortholog | Ec-14_000360.1 |
| Exons | 3 |
| Model size | 2539 |
| Cds size | 822 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930697.9058814-UTR-C-linearis_contig89:609604..609628 | 1622930697.9058814-UTR-C-linearis_contig89:609604..609628 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig89 609605..609628 + |
| 1690881203.0487866-UTR-C-linearis_contig89:609604..609628 | 1690881203.0487866-UTR-C-linearis_contig89:609604..609628 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig89 609605..609628 + |
| 1622930697.981514-UTR-C-linearis_contig89:623011..624704 | 1622930697.981514-UTR-C-linearis_contig89:623011..624704 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig89 623012..624704 + |
| 1690881203.0918581-UTR-C-linearis_contig89:623011..624704 | 1690881203.0918581-UTR-C-linearis_contig89:623011..624704 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig89 623012..624704 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930697.9253926-CDS-C-linearis_contig89:609628..609745 | 1622930697.9253926-CDS-C-linearis_contig89:609628..609745 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig89 609629..609745 + |
| 1690881203.0608776-CDS-C-linearis_contig89:609628..609745 | 1690881203.0608776-CDS-C-linearis_contig89:609628..609745 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig89 609629..609745 + |
| 1622930697.944834-CDS-C-linearis_contig89:622020..622248 | 1622930697.944834-CDS-C-linearis_contig89:622020..622248 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig89 622021..622248 + |
| 1690881203.0719287-CDS-C-linearis_contig89:622020..622248 | 1690881203.0719287-CDS-C-linearis_contig89:622020..622248 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig89 622021..622248 + |
| 1622930697.962684-CDS-C-linearis_contig89:622534..623011 | 1622930697.962684-CDS-C-linearis_contig89:622534..623011 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig89 622535..623011 + |
| 1690881203.0817218-CDS-C-linearis_contig89:622534..623011 | 1690881203.0817218-CDS-C-linearis_contig89:622534..623011 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig89 622535..623011 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig89.16434.1 >prot_C-linearis_contig89.16434.1 ID=prot_C-linearis_contig89.16434.1|Name=mRNA_C-linearis_contig89.16434.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=274bp
MAEGFTAVDYATDVRLSEVKGKRLWLVRVPRHIDPARLEGAKVKLPVRKG
REGKVLGRVTKAGDDGDDIDQEDGGEGEEDLVVRAADVAESAGFRALFSA
DEDRPLIAAGPFAGQLNVSVETADLEPVGLEDHAPVATFVEPYRGRPQLK
GMRVRSKPAGAGSGRCRMKRVVAMNSQCYSRTCVCHMLLVHVLQHASTCV
VAYASVAEWFGFCSYVAPANIENVFQVSRRPRGSVAQANVLSFSRKVTCW
SKINVITWPVTTFFVVTAQVPNA* back to topmRNA from alignment at C-linearis_contig89:609605..624704+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig89.16434.1 ID=mRNA_C-linearis_contig89.16434.1|Name=mRNA_C-linearis_contig89.16434.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15100bp|location=Sequence derived from alignment at C-linearis_contig89:609605..624704+ (Chordaria linearis ClinC8C monoicous)
ACGCAGTTCGTTTCAGCACAGGCAATGGCGGAAGGTTTCACCGCTGTAGA
CTATGCCACGGATGTTCGATTGTCGGAGGTGAAGGGCAAGAGGCTGTGGC
TTGTGAGGGTTCCCCGACATATCGACCCGGCCAGGCTAGAGGTGAGCACC
AAGCATCAACTCAACCAGCAGTACCAGACCTTTCGTATGTATGGTGTGTG
GTGTGTGCACTCGTAGGCCAACGAATACTCACGCGCCACTGCTGCTGCTG
CTGCTGCGGCGGCGGCGTTTGGGAACACCTCTGCAATAGTCGAGCTTGCA
TGGTAGTCGAGATCATCGCGTGTCTGCAAGTATGTATTAGCAAAGCCAGG
AATTCCGCAGTAGGGCAGGAAAACACGCCCCTTGTGGATGCTGCTTGCCC
TTGTTATCCCACACTTGACTCTCGAACACTACAGTATACCTGCACGACTC
TAGTCACCTCTCGTACTTGTAGCCTATATTTCCCACCAAAAAACACCGCC
AGCCAGCACGATGCTGCGAATGAAGCTGAGATTAGTCCACCACTGTCTGT
GATCTACGGCATATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT
CTTCACATTAAAAACCATCCCGGTCCCGTCTCTATCCAGTACTATGATAC
CTCCTTCTGTCTCAACCTCTCCGTACTAATCTATCACTTGACGCGGCCAA
TTTCCGTGGTCACAAGCTAACTTACCTAAAAAGGTATACTGAAAAATAAA
ACGGACCCCAAGGGTCAGCAGAGCGATAAAATACGAGAAAAATAAAAAGA
ACCAGGAAACAATTAGTCTGGAGCCCTCCGCTCCCCTCTACACGCTATGT
GAGGCAAAAATAACAGGGCCGTACGTGGTATGAGATGGTATGGTAATACC
ATCTTTAGATGGTATGGTATGGTACGGTATGGTAATGGTTGCGGAATTTT
GGTCCCATCGCCAGATACCATCAAGTGACCACCACGCCATTCGGAGGTAC
CATCAGTAAATGGTGATGGTTTTCGAACGCTTACCATACCATCTATATTA
CCATCACCGCTGCTGAAGCTACCACTATCCCATCGACAACAGTCTTCTCT
CACCCATCTCTCTTCCCCCAGATTTCCCACGAACACCAAACAAAACTGCG
CCTCTCGCGTCCCCCCCCACCTAATGGCGTTATTTTCGGAAGGAGGTGTG
CACGTACGGAAAATGTGTGGGCATGGGGGGTAGGGGGGTAGACCCGCTTA
CAACCGGGCCATCGCACAGATTGTCCAACAGCAGTGTAAAAATCAGAAAT
CAATCAAAAAATATACTCCGTATTAAAACAGCACAACACCAGCGGACGAA
CACATGGCTGTACACATGGCAGGGAACGTTGTGGCGCCTGCCCGCTGGCC
GCATCTAAGTTTACTAGCACGCTTATACGCAGGCGTAGATACCACCAGTT
GTCAAGCGGAGAGGAATTTTTCCGCCCTCAAGCAGGTCCTAAGTGACATG
CGTGCCGGTACCCTTCCCCGTAAGATCGAGCAGATGCTGTTGCTCAGGAT
CAACAGGCACCTCATCCCAGGCTTTGCGAAAGTAGAGCGAGAGCTGGCCG
CATTGAAGGGCAGGCACGATGCACAGGCAAAGGCGGCGGTTACCGCCCAG
CAAGCCAGGGAAGGGAGCATTGTCACGCTGGACTAGGGTTGCGGTGTGCT
GTCACGTTTCGATTGCTGGTTTTTGTGGTTTTTGTGTGAGAGTTCTTGTT
TAGCTGCTATACTTTTGTTCTTGCCGTGTTTTTTTCTTATGCTTAGGCTG
GGGTTCCTTGGTGCCTCAGTTGCTGAGATCCAAATAAAAACACATACAAC
TACAACCACCATATTCCATGTTTTATTTTATTTTTTGTCCTACACTTAGC
TGGACGCACGAAATATGACCGCGGGGGGGTAGTGGAATCACCAGGGCAAC
ACCTCTGTGTACTAGAGTCCATGTGTCCCTGTCTTCTCGCTACCACGCCA
CGGCATTACCTGCCTCATCCCGTCCCACTTACCGTCCCACCAGTTACCAT
CCCATACCATCACGCGAAGCCAACATTTACCATCCCATACCATCAGCACC
CTGGTCGTATACCATCTCATACCATTTGCACCCTGCTCGTATACCATACC
ATACCATCACGCCATATACGATTCCATCCCATGTCATCGCAATACCAACA
GAAGTGGGCGCAAATACCATCCCACCAGACCTGATGGTAACCCTAAAAAA
TTTACCGCCTGCGGCGGGCTAAAACCCCGATGGGGTGGTACGTGGCGCCT
GCGGCACCACGTAGGCGCCACGTACGGCCCTGAAAAATAATAATAAAACA
ATAGTGGAGCGCCAGCATCACCAACCAGGGGTATAACCTCCTGATTCTAT
CTTGCTACCCCTACGAAGCCGGGGTGTTCCGTCCCAGTTCCCCCGGCAAG
GCAAATACATAGTCGGATCCCTCTCCACCGACTAAGGTGCATATATTAGG
GCTGTGTATCGGTAGGTTTAAACGATATAATATACCGGTACTCCGTATAT
CGTTGATCGGCGCAGCCGATATAACGATATTTTTTCGATATATCGGCGAA
GCCGATATATAGACAAAATATCGGCGAGCACAGGTGAGCTGAGGCGCGAA
GGCGCTCTCAGCTCGCCTGTGCAAGCCCCCTTAGGCCCCCCGGCTGGTGA
GGGGCCCCGCCGGAGGCGCTTTTTTACGCGATTTGGCTTCGCTAGAACAT
ATTTTTTGGGTGATTTTGGGCCACTTCGATCATGCCATTTTTGTGGGGTG
ACATGATGCAAACGCTAGAAAACGCTAGAAAACGTGAAACTACCAAGAAC
ACATGAAAGAGGAATGATCAATTTCTTCGAAGCTTTGGTTGGGTGGCACA
ACACGACCGTTTTTTTATCGTTTTTACGAAGCTGCTTCCAAAAACCAAAA
ACCGTTCCCTAGCGTTCCCACCTCCCACCTTCACCTCCCTCTTCCTCCCT
CCCCCTCTCTCTCTTCGCCATGGCATGTTTCTACAGTACAACAACGACAC
CCCGCCCAAAGCTCACCACCCCGTCTAACTACCGTACGTAGTACTTCGAG
ATCTAGATCCAAATCACTTCTTGGCTTTGCGATGGGTACAAACCAAACGT
GCACACATGACCTGTTCCGCACAAAATGCGGAAAATCGCATCGCAGACGT
GCTGGTTAGAGCAACGAAACAGCAGGAGTCTTTATCTTCTTTTTGCGAGC
AGCACTCTTCTTCCACTCATCTACCACACCCCACACGTTGCGCAAGTACA
CGAGGAGCTCGACGTTTTCGTCTAAAAGGCGACTCCGCCTAGGCGTCACG
ATTAGCCCTGCCGTAGAAAACATGCGCTCGGATTGTGCTTGAGATGACGG
AATGGCAAGCACACGACGAGCCAGCGCCGACAGCAGAGGGTAGTCCAATT
GCTTCTTGCGCCACCAGCCGAGGGGATTGTTGAAGACCTTCTTCTCTTCC
CCCTTGATTATCTCCATGTCCCACACCCGTATCCCAGGTGAAGCCATGAA
GGCAGAGACCTCCATGTCCACGATGGCCACCAGTTGCTCGCGTTTCTCAT
CCGCGGAATCGCCCGCACCGCTGTCCCCTGCATCCGCAGCGTGGGCAGCA
GCGGCGGCCTCGAACGCGCTCAAGCGAGGGCGCTTCGGGGCTCCCTGGCC
TCCTCCGAGTGGTTCCCGCTGCGTCTGGACGGGGTCGGGAGCAGGTTTCT
CCGCGGACGCGGGTGCCTTGTCGCTAGCGTGCTTCCCCAGAGCAATGTCC
ACCGCGGCGCTAGCGACAGCGCGCCAAACGCCTGCGTGCTCCTGCTGCTG
TATCCCGTAAAGGTGCTTGGCCCTCGGGTCGAGGGCCGTTGCGAACACCT
GCTTCAGCTTGAATCCCTGCGGTTGGCGCCGCTTGCCCTCCTTGTACTCG
AGTATTTTGGAGCCGTCGCCCCAGCGGTTGGTGAAGTCCGCCAACAGGGC
TTCCGCACCCGGACGAACGAGCTCCATCGCTTTCTGCGTATTCTCTTTGA
GTTCCTGTTGCGCAACGGCCTCGAAGTCGTTGACTGCGGCCTCAAGCCCT
TCCCGCAATTCCGCCGCTTTCGCGATGGTCATGCTACCCGTCACGTACTG
AGCCCCCTCCAGGTCCTTCTGCGCCTTCATGAACGCCTGCAGGATCGGTT
CGATCAGCCGCAGCACCTCCCAGTCCGTGTCCGACAACAGCGGGTGGACG
CCTTCCACCGACTCATGAAGCGCGATGGGCTTCCTCATGACGTAGAGCAG
ACGCACGATCATCGCCCATGTCGACCACCACCTCGTCTCCACGTCTTGCA
TCACGGACAGTGCTTCAATCTTGAGGGTGCCGCACAATTGGCCGAGGCGA
GCCGCCATCTGACTCGACTTCTTGTAGCGTCCTACTAGCGTTCGCGCAAG
GCCCAAGGCGCCAAGACTCCTGCCGTTGAAGACCGATGAAGTCGTTGACT
CCATGCGGTGGTTGGAGCAGCCGATATGCGAAATCGTACCCCCGCCCACC
TCAAGCAGGCGACCCGCCTTGATCATAGACGGCTCGCAATCGGTGACGCA
TGCAGTCACCCGACCGGTTAGGTCGTGGCGTTCAATCATTCCCGCCACCA
ACGCCGCCAAGTTCTCGCCCGTGGTTGTCCCCGTGCGCTTCGTGCAGTCC
AGAGAAAGATGGTGCAGCTTCCACTCGGAGTCGATATAGGCCACGGTCAG
CGACATGTAGGACTCGTTGCTCCGAGATGTCCAGCCGTCCGTGGTGATCG
CTACGAACTCGTCATCCAGCATGAGGGCGACTTCGTTTTCGAGGGCTGTC
TTGACAGCGCGCATCCTCGAAAGAACCTCGCGGCGGGCGGGGACCTTGGC
TCTTTTGTTGAGGTTCAAGACCATCGCCTTCAAATCCGGGTAGTCGACAA
ACTTGCGAATTATCAAAAGGGCCGAACGTGGGGAAATAAAAGGGGCAACA
GTCAGATGCACTGCATAAAGTTGGGAAAGGTGCCGGGAAATAAAGGGGGC
AACAGTCAGATGCGCTGCATAACGTTTCGAAAGGTGCCGCCTGTGAAATT
GAAGCGGCGGCGGTCGATGTACGGCAAACCCACAGTTATTTCGTGCCACC
TTCAAAAACCAAAATGTCACTGCTTGGGCACAATTTTTTTTTGTAGGCAA
TGACCTTGACTCCCTCTGCTCGCGAAGCGCGGGCGCACCCTTGGAAAAGT
ACTGTTGTATCGCTGAAAAACTTGCACATGGTATGTATTACGACACGCGC
ATCCGTGGAAAAACATGACCACTGCTGTTTTGATCAAAAGTTACAGATGG
TCCTGATACGTATGTCCAACACGCAAATCCTTGAAAAAGCACTGCTCTAT
CTTGCTGTATCGCTGAAAAACTTGCACATGGTACGTGATACAACTAGCTA
GATACAACACGCGCATCCGTGGAAAAACATCAGCACTTTTAAAATCTACA
AAAAAATTACACTTTAAAACCTACAAGAGAGACACCGAAACTTACCGACA
GAGCGAGGTAGTTGTTGACGATGAGACGAACCAAATCGTCGCGCCAGACT
GCCCCCCCATCCTCCTTCGAGAGGAAGGTGGTGATCGCTGCTTGTCCTGT
TGCTGCTGTAGCGGGGCCGGGTGCTGCTGCCTTCGCGTTCGTGATCGCAG
TGTGTGCGGCCCTGTGTCCAGGCTTGGCGGTGTCGAGATGAGCCATGAGG
TTGGGAGGCGATCCTCCCTTGAACTTGGCTTCTGCGCTGTGGAAGTCGCC
GTTGTTCACGCACAACTGACACACAGCGATGGTCGCAAAACATGGGTTCT
GATACACCCTGAAATGCTTCCACACAGGGTGTGACGCATTCGAGGGCTTG
GGCCGAGTCGGCAACGTCGTGACCCTCCGCACCTTCTCATCCCTCGCGTT
TTTTTTCGCACGCGCTTCTGTCTCTGTCTCTTGTCTCTGAGACTGGTTGA
ACTGCAACCCCTGGCGTGGGGGACCCTCCATCCTGGTCCGCTGGTGGTGG
GGTATTCATGGGGTCCTGTGGTCTGCTGTTTGCTGTGCTGTTGCTGTGTG
TGTAACGCTGCCGCCTTGCGGGGCTCCGTATGTGTATATGCGAAATGCAT
ACCCCAATTTCGATTCACGGAGCCCCCTAAAAAATCGGAGAAACTATCGG
GGCTGCCAATAGATATTCGATACGATATATATCGTCCGATATTTTTGAAC
ATATCGGCTCCGATACACAGCCCTAGCATATATATATACTTCGAAGTATA
AAGTATGTTACAAGGGAAGCAGACAAGGAGACATGTCGACAAAAATAAAA
CGTCCAACACGCAGAGGGACAGTCACACCCGGAAAGATATAATCTTAACA
CGACATCATTCCCCCGGGGGGGTAGTGTAATGGTGCAGCGAAAAAAGGGG
GGGAGAGGGGAAAGTGAAAGGAAAAAATAGTCACTAGGTTCAATCCGTCA
CATATCGCGCCACCCGGTCGGTCTCTTCTCGCTTGCTTTCTTCCCTCGCC
GTTTCTTTCCGCCCCCCTCCCGTCCCGTTGATTGGCGCCGTGTCTAAACT
ATTTCTGGTCCCGTCGTCTCCTCGCTTGGTGGCGCGTTGTCGGCTCGCCT
CCTCCTCGTCCTTGTGCCAAGAGGTCATAAACCTCTCAGCTCCCTCCAGC
ACCCCCGCGTGCCACGGTACTCCCCCCTTCACCTTCGCCGCCTCCGCCCA
AATTAATTTCGGGACTCCGAAGGCACGCGGTTCGTCGGCCGTAGAGCCGT
GCGTGGCCCCGAACGCCTTCAAATCGTCCTTCAGGCATATCAGCCAGCTC
TGCTCCGGGCTTCCCCTGCCCGGGTCCTCCCCTCCCACCACCTCGCCGAA
CATCAGTCGCTTCGGGAGTCGCCCGTCCGGCTGCCTTGCTACGGCCCCCG
CGAAGAGCAGCCGCCGCTGACGGACAGTGGCTTCCACGCTCTGGCAGCCG
ACCTGCTTCAGCGCCTGGGCGTATGACAGCTGCCGGTGGGTACCCCGCTT
GCGTCGGTATCCGATGACTCGCAGGAGCAGCCGGTGGTGTGTCGTCTGCA
GCAGCCGGTAGTGCTCGCGACGCGGTGACCACGTCATCATGCAACCGTAC
AGTAGCGCCTCCATTGACTCCGCCTTGAGTAGGCGAGTCTTGAGCCGGAA
CGGTGCTCCCGGCCTGTCGAAGAGCTCCCGGGCATATCTCCTGAAGCACG
GCCAGGCTATTTTGCTCCTGTAGTTGATCTCTCGGGTGAGGTCGCCGTGT
TCGTTGACGAAGCCACTCAAGTACCGGAACTCGGTCGTCTGCGCGTACCT
CTGCCCCGCTGCGCTTCGATGATCAGCGGCGGCGGCGGTGGTGGTGGCTG
CTTCTCCTTCACGCGCATCAGGAGGGTCTCCGTCTTCTTCTCGGATACCG
TCAGCCCGAACTCCCGGAGTACCTCCACGATAACGGTCATCATCCTCGCC
AGTCCGTCGGCGGATTTCGACACCACGCCGGCGTCGTCGGCGTACAGCAT
CGCCCATACCGCCCGCCGCACTTGGTCCAGCGGTGTCCCCACCCCCGCTC
CCGGCTCCTCCTTCAAGTGCACCAGGTTCTGCATAATGACCTCATCCTCG
CTGAATCGCACGGCAATGATCTCGATGGGCGCGGCGAAGAACACGTTGAA
AAGCAGTGGGGACATTGTACACCCTTGGCGCAGGCCCTGCGTGACCGAAA
ACCAGTCCGATAGCTCTCCGTCGTCCATGCGCACCCGGGCCCATCCCGAC
ATGGAATTGGCGGATGACGGCGATCATCTCCGCGGGAATCCCGGCTCGGG
CCAGCACCTTCCACAGCAGCTCTCGGTCCACCGAGTCGTAGGCCTTCTGC
AGGTCGACGAAGCACATGTAGAGCGGTATCTTCCTCCTCCGCCCTAACTC
CTGGAGTCGGCGCACCACGAACAGCATGCATACCGTGGATCGGGTGGATC
GGCCAGGTCGGAACCTGCACTGCTCCTCCGGAAGGATGTCGTTGGCTTCG
CAGTATGCACTCAGGCGGTTGGTGATAGTCTTGGCGAGGACCTTGCCTAC
GTGCGACAGCAACGAGATGCCCCTGAAGTTGTTGCAGTTGACCCGCTCCC
CCTTCTTGTACACCACCTTGATGATTGCGTCCTTCCACTCCTGCGGCATC
TCTCCCCCGTTCCACACTTCGACGAAGATGGCATGTAGGTGCTCCAGGAC
AATGGGTTCTTCGCCGTCGATCTTGAGCAACTCGGCATGGAGGGCGTCAT
CGCCGGGCGCCTTCCAGTTCTGCAGACCTTTCGTCGCCCTCTCCACCTCC
TCGAGGTCCGGCGCTGTTCCCAGCCGTCGAGTGGCTCGCGTCGTTGGTCG
CTGTGTCACTTGCTCGACGACGCCCGGGTTCAGGGTGGGGGACTTGGTGC
TGAGGAAGGTGCCGAATAATCTCTCCCACCGCTTGAGGATGTGTTCCTTG
CCCCGGAGCAGCACGCCATTCTCGTCCTTGACAAACTGCTGTCCTCCTGC
TTGTCTCCCGCCGAGGCCCACCGATCTCTTGAGTTGAGGTGTTTGTATAG
CCCCCGCATGTCGCGGTCCTGGTACACCGTTTCGAGCTCCGTCACATATC
TGTCCAGGTGGGCGTAGATGCTCGTTGCGATTACCGCCGCCACCCCCTTG
CACGCTGCCTTGAGGATCCTCCATGTTGCTGCATTCACGCTACACTTGAA
GGCGCGGCGTGCCGCCCGCCGCTTGCACAGGGCGGCATCCAAAGCTGCTC
TCGCCTCGGGGGTCTCGTTCCACTCCTGCTCGCGCCGTCTCCGAGGCTCC
TCAGGCAGTTCCGTCCGCGCCGCATCAATGAGGGCATCTGTAAACGCCCT
CGCCATCTCCGGGGCTGCCTTCGCTGGTTCCTCTCGCTGGCGGAGGTTGC
GGAGGAACCTCTGTGTCACCACCCACCGTGCGGTTTCTACCTGCAATTCC
CGTCGGTCGAACTGCCGCGGTTTGGGGTTGGTCCGGACAGCTTGGTTGTA
GGCGAGCCGGCCACTGAGGTTGACGGTGGCCACCACCATGTTGTGGTCTG
AGTCCAGCTTGACTGGACGCACCGGCTGGGGGATGGCGACCACGTTGGAT
ACCCGGCGGCCGTGTGACTGGCGCGTGAGGATGTAGTCTAGGCACTTGCG
GTCGGTCCCTGACACACCGTTGTATGTATGCCACATCCCGTCCTTCCCTT
CGTCGAAGAAGGTGTTCAGGATTGCCAGCCTGTTGTCCGCGGCGAAGGTC
AGCAGCAGCCGACCGTTGTCGTTCAGCTCATTACGCCCGTGCGGGCCCAT
GGTCCCTTCGTCTTCTCCATCTATCCTCTTTCCCGTCTGCGCATTGGCAT
CCATGAAAATATAGACACACTCCTTGGCAGGAATGCTCCGCACGAGACTG
TGAAGTTTTTGCCAGAACATGCGTTTGCTGCCGGCATCAGCGACATCTGT
TGGGGCATACGCAGCAATGAAAGTGACCGCCCCGTGGCGGCCCACCGTCT
CGAACCTCATGGCCATGAGGCGCTCGCCGATGAACTCCGTGGTGTTGTTT
TTGTTGTTTTTGTTGTTGTTGTTGTTGTTGTTGGTTGTTTTCTTCACTTT
AAACTCGTTACAGTTGCTAATCCCTAAAATCTAGCAAGATCACAGCTTGT
GGTCACAAAAGTGCTAGAGCCATCAGAGAATCCTAAAGAACACGCACACT
TTTAGCAGGGAAAGGGTACACAAGCCCGAAGAGGTACACCTTATATACCT
AGAGCAAGTTATGCGTGTCCAAATCTGAACTACACGCCCGCAATCTCCAT
TCGGATACACACAGCAGCATCGCCCCCCGTTCCCACTTCCTACCAATGAA
TTAGCCGACTACAGCGGAACTGCTGTCTGAAGTGCTGTCTGTACAAAAAC
ACACGATAGGCGTGTGAACAAGGATGGAGCACGCAGCTGCTGTCTGAAGT
GCTGCCAGAATGACATTCCGCGGACATACAGAGTGAAAAAGAACAGCCAA
CCAAAGCCATCACATCAATTGACAATTACCCGAGTCTATCCCGAACGTCT
GTGTTAGGCACAGCAGTATTGTAAACATCGACACTGATTAGGAATCCATG
ATGCAGGTACACACTTAAGGCACCCGGGGTATCCGCGCCATCGCTGTGGC
GTCTCTCTACAAAACCAGTGACGTCGTCGCAAAAACCCAGCACCAACATC
CATCCAGAAAAAAAACGAAATAATTGCCAACACAACATAATGTTTGTCCA
TGCGCCACGGCTCGATGACGTCTGCATGCTCCGGTGCCGCTGCTCCGGTG
CCGCTGTGGCCAGTCCTAGCACGACCACACTCGACCCGCTCCGTCCGTGC
ACGCTCTCGTCGCTGTCCTTCCCAGCCGGTCCCTCGCTTTCTCCCTCGTT
GCACTTAGGGTGCTTGGTCTTCAAAAATAAAAATCTCGCGCCGAAGGGGT
CAACCAGCCCAGTCTTCAGCTCGTCGCTACCCATCCATCCTCCTTAGATG
GCGCAGCGAAGCCAGGTTACCGAGACAGTACAGCTCCCTCTAGCAAACCT
AGGGCCGTGTACGTAGTGTCCTTCACCTTTCTGGTGGCGTCTGCCTCCGC
GCACAAAATGAGATGGACATTGCTGCCTACACCGACGGCCATAAAGACCC
GTGCATCTGAACTTTTGTGCCTGACGCACCAGTGCCGACCCAACTCCACC
GCTGCGCACGCCTCGCGGCGGGTGCGCAGCAGCAAGAAGGTATCGGTCCA
CCCGAGGGTGACCCTGAGGGTGAGTCTAGCCTTGCTCGCTAGAAAGACCC
CCCCCCTCGCTATGGGCCATGCCTAAGCAAAAGCCTTGCCAACGCAGCGA
GGGGAAGAAGGGAGAAGTGTGTGTGTGTGTGTGTTTTCGTCCCATTTATT
TTGGCGACAGTCCCTTTCCGATCAAGGCGAGACGTGTACTGCACGTTGCG
GTGTATTTAGAGTACTGCACTTGTTCAGTGTATTTTTCTGTACAACTAGA
ACCAACCGCGGTCACACAGGAGGGGATAAACACTGGGGCTTTTTCTTCTT
TTTCTGTTTGTTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGAT
TTTATCGCGAGAAGGGTGCAGCCATCCCTTTCCCTCGTCAACGTGCTAAG
TCGAAGTTTGGTACTCACGAGCTTTTTCAGCTATGTTATCGCTTTCACCT
GCAAAGTCGCAAAAGAAACACTTTTGCTTGGAATCGAACTCCAGACTTTG
CTGCTAGCGGGTTCGAGGTTAAACCACTAGTCCACCGGGGCGACCGGCTG
TGTACACGGAATTTTCACACATCGACTCTTCGACTGCTATTCCGACCCCG
TGCTGGCGACCATCCTGCGCACCACAGCAGAACACCCGAAAACCAGCGGC
GATGCATTCCGTTCGTCCGGCCCGTCGTGTCTCCTGCATTCCGACCACCG
AAATTCCCTGCTTCGCTGCCTCGTGCAATACGCTGTCGGCTCTCCCATAG
CCGTTGGCCCCCTTGACAGCCAGAGTCCTCACTTTGTAGGTTGCTACCCT
AACAAATAGTATACTCTGCTGCCTCTCCCGGGTGGCGCGTGTTGCCTTCC
TATCCAGCCTGCGCCCCACCCGTCCCCTCCTTTTCTTCCTTCGGCCCTTT
TTTGTTTCTTTTTTTCTGATAGCTCTGCAGACCCTCGGGTTGTAAAAGTT
AACCCGGTGCTTGCCTTTGCCAGCGAGGTGTCTTCCTGTCCCCGAGCGGC
GTGGCTCTCCAGCTCTGGACCCTTTCCATCCCCCTCTCTGGTGCATACCC
GCACGGTGTGCGACCATCCCGCCACCCTCTCCGTGCTCTCTGCTGCTGCC
TAGCCCCGGTGTCCAGACCGATGCATTTGGGTTCAAGACCATCGGCAGCT
GCCCCAAGTCGGCTGAATCGCGACCTACCCCGATCTCCTGACCGCGGTAA
CTCCCGACCGCCAACCTCAGGATCCCTTCCTGAACGGTGCTAGGGACCGT
ATGTCCGTCTTTGTTGGGTGGTCTTTCGAGGGTTAAGTTCACTTGCGGGC
CTCGACCTCCCCCAGGGGGGGGGGAGGGGGAAGGGCACCTTTGTATGGGA
GACCTCAAGTGATCAACATTACCGGCGTGGTATGTAGGGGTGGGTGTTGA
ACACCGTAGACGACACCCAACAACGTCTACCAACATCCATGTCCCCTATT
GGCATCGGCACCACCAGAATATGCCCTTCTCGCTGGCAAAGAAGAAGCCT
GATTCCTATCGAAAGTTGGTTACGTTCCCATGCATATCAGCGTGAACTGC
TGTACCACCAGGTCGTTTTTTCCATCTTTTTCACGCGTGTTTGACTCTAC
CAAATGGGATATGCAGGGTGCTAAGGTTAAGCTGCCAGTGCGGAAGGGCC
GAGAAGGAAAGGTGCTGGGCAGGGTAACCAAGGCAGGCGACGACGGCGAT
GATATCGACCAGGAGGACGGGGGCGAGGGAGAGGAGGATTTGGTGGTGAG
GGCGGCGGACGTCGCGGAGAGCGCCGGGTTTCGTGCCTTGTTTAGCGCCG
ACGAGGACCGCCCGCTGATTGCTGCGGGTCCGTTTGCCGGCCAGGTGTGT
GATGGTGTGTACATTGAGTGTTCAAATAGGGGAAGTACACAATGGCGCCT
TGTCGCTTCTCTTGGTGTTTTTTTCAACAGACGTGACGCGTTGCTGCTTC
TGCGGGTGCTGCCGCCTACGTAGGTTTGTGTTGGCTTGAGGCTTGCAAAA
GTTACGATTTTTCGGGTTCAATTTCCACAGCTTACCCACCCACCGCTGGC
GCTCTCAGCACTACAGCAGTACTGCTGTCCATGCTTGCTCTCACCAACGG
CATGTGGGTGTCTTGTACCGTGATTCGCAGTTAAATGTTTCGGTAGAAAC
GGCAGATTTGGAGCCCGTCGGCTTAGAGGATCACGCACCTGTGGCGACGT
TTGTCGAGCCGTATCGAGGGCGGCCACAGCTCAAAGGGATGCGAGTAAGA
TCAAAGCCAGCCGGAGCAGGATCGGGTAGGTGCAGAATGAAACGGGTTGT
AGCCATGAATAGCCAATGTTACAGCCGCACATGTGTTTGTCACATGCTAT
TAGTACATGTGTTGCAGCATGCTAGTACATGTGTTGTTGCCTACGCGTCG
GTAGCCGAATGGTTTGGATTCTGCTCTTATGTAGCACCAGCAAACATTGA
GAACGTCTTTCAAGTCTCGCGAAGACCGAGGGGGTCAGTGGCGCAAGCCA
ATGTTTTGTCATTTTCCCGTAAAGTGACCTGTTGGTCGAAAATCAATGTT
ATCACTTGGCCCGTGACCACATTTTTTGTTGTAACAGCACAAGTTCCCAA
TGCGTGATTGGGGGTCAGTAAGCACCGCCTACGGTACAGAACCTTATTGC
ATGAGTTCACACCACCACGTAGGTAACCTCAGCGCTTTTCTGACCTCGTG
GTAAACCACGCGAACTACGTGCTGGTCTCTTTGGGCTAGTGACTGCAGGA
CCGACTCACGCACAGCGGTAGTCACACACCGCCACCACCCGCCCACCATT
CCCACCCCGCCCCAGAGTACAAGCGGACTCGACCACTGGCCAACCACGAT
CACGACCACGACCGAACGGGGAAAGGCGACCACACGACTCCCGCTACACC
AGACCAAAGCAAAGGGGGCAAGAGGAACAGGAACAGACACGCCGACTCTT
CGGAAACAGCGGCGCAGTCGCAACCTCGCCAGTCTCCTGCTGCGGGAACT
CCGACAGGCTCCAAGCAGAAGAAGAAGAAGAGAAAGTCAACTGGCGGGGG
AGGGGCAGCCGTGGAAGGGGAACAGGCGCGGGGCGCGTCGCCGACGGCCA
AGAAGCCCAGGAGAAAGAAGACGGCCGAGCGATAGTCGAGTCTCATCGCC
GCCAACAGAATAGTAGTGGGTGAACCGTTGCTGAATTTTTGTTTGGGGGG
GAAGGAAAAGAAGGGGGCTGCTTTGACAAGGGTTGGATTTTTTTTTTCTC
GTTTCCAAAGGGTTTTCTGTTTGTTCCCTACTCTAGTCTCGTGTGAAACG
GTCGTATGATCGGTGTTTTGCCCTCCGTGGGATCGGGTGTGTGGTTCGCT
TGTGTAGCAGTGTTGTAGTGGGCTGCCCGATCAGCGGATGTGGCAATTGC
TTCCGTTGATGATTATGAGATGGTGACTGTCAGGAGTCACGGCAGCTTGC
GGGTCTTCCCTTTGTGGTGTTCAATCTCGCACAAGCTCCGCAGCATCAGT
CACATGTAGTCAGCACTCACAGCCATAATTATGGCACCGCCTCGACGACG
TCTTGATGAGAACAACGATTACGAAAGCCTATCGAAATCAAATACATGGC
TTCGTCGTCGGCGAGGTCGTGGATTCACTCGATTACGATGGCAGTATTCG
TCGTCGTTGTCCTCGTAGTGATCGTAGGTAAATAATTTAACGAGGCGGTG
GCGACATCGGGGGGCGTTTCATCTTTTCCTAGGCCGCAAGGTCTGAATCG
GCCATGAGATCGGGGTGGGGCTCGCTCTCGGCTTCGCTGCCGACCTTGTT
GTCTGTCACACGAGATTTCATCGGACGTAGTCTGAAGACGGGCATGTATG
ACGGTCCTGGCAGACCCGAGATCGGGACGCACCCGCGGTTTACGGTTTTG
CCCGGTACATCATCAGTGGGCCCCGATTTCGGGGTCTGTATCAGGACCTT
CGTGACCGTCGTCAGGGTTGTTGCGGTTGTAGTATCGTTATGGACGCGGC
CGGTCGCGAGGGGCATGTACACGTGTGACTTGCGATACACAGCAACACTC
GTGGACCGGGTTTGATGGGTCGGTAAGGGTTGTTGAGCGGGGCGCAGGAC
CAGTAGATAGCGCGCAAGAAAAAACGTTACTGCTGTAGAGGGGATTACGG
AGTTCGAGTGCCGTGGTTTCCGGGAGAGAGAGAGAAAAGGTGCCCGCAGT
TTTCTGATTGGTCAATTTCTTTTAGGACCGTTCGAAAGAGAGGCGAAAAT
CCCGTGGTCGACCGATGACATCATCCACGGCGGTGAAGTCACCTTTTCTT
back to topCoding sequence (CDS) from alignment at C-linearis_contig89:609605..624704+ >mRNA_C-linearis_contig89.16434.1 ID=mRNA_C-linearis_contig89.16434.1|Name=mRNA_C-linearis_contig89.16434.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at C-linearis_contig89:609605..624704+ (Chordaria linearis ClinC8C monoicous)
ATGGCGGAAGGTTTCACCGCTGTAGACTATGCCACGGATGTTCGATTGTC
GGAGGTGAAGGGCAAGAGGCTGTGGCTTGTGAGGGTTCCCCGACATATCG
ACCCGGCCAGGCTAGAGATGGCGGAAGGTTTCACCGCTGTAGACTATGCC
ACGGATGTTCGATTGTCGGAGGTGAAGGGCAAGAGGCTGTGGCTTGTGAG
GGTTCCCCGACATATCGACCCGGCCAGGCTAGAGGGTGCTAAGGTTAAGC
TGCCAGTGCGGAAGGGCCGAGAAGGAAAGGTGCTGGGCAGGGTAACCAAG
GCAGGCGACGACGGCGATGATATCGACCAGGAGGACGGGGGCGAGGGAGA
GGAGGATTTGGTGGTGAGGGCGGCGGACGTCGCGGAGAGCGCCGGGTTTC
GTGCCTTGTTTAGCGCCGACGAGGACCGCCCGCTGATTGCTGCGGGTCCG
TTTGCCGGCCAGGGTGCTAAGGTTAAGCTGCCAGTGCGGAAGGGCCGAGA
AGGAAAGGTGCTGGGCAGGGTAACCAAGGCAGGCGACGACGGCGATGATA
TCGACCAGGAGGACGGGGGCGAGGGAGAGGAGGATTTGGTGGTGAGGGCG
GCGGACGTCGCGGAGAGCGCCGGGTTTCGTGCCTTGTTTAGCGCCGACGA
GGACCGCCCGCTGATTGCTGCGGGTCCGTTTGCCGGCCAGTTAAATGTTT
CGGTAGAAACGGCAGATTTGGAGCCCGTCGGCTTAGAGGATCACGCACCT
GTGGCGACGTTTGTCGAGCCGTATCGAGGGCGGCCACAGCTCAAAGGGAT
GCGAGTAAGATCAAAGCCAGCCGGAGCAGGATCGGGTAGGTGCAGAATGA
AACGGGTTGTAGCCATGAATAGCCAATGTTACAGCCGCACATGTGTTTGT
CACATGCTATTAGTACATGTGTTGCAGCATGCTAGTACATGTGTTGTTGC
CTACGCGTCGGTAGCCGAATGGTTTGGATTCTGCTCTTATGTAGCACCAG
CAAACATTGAGAACGTCTTTCAAGTCTCGCGAAGACCGAGGGGGTCAGTG
GCGCAAGCCAATGTTTTGTCATTTTCCCGTAAAGTGACCTGTTGGTCGAA
AATCAATGTTATCACTTGGCCCGTGACCACATTTTTTGTTGTAACAGCAC
AAGTTCCCAATGCGTGATTAAATGTTTCGGTAGAAACGGCAGATTTGGAG
CCCGTCGGCTTAGAGGATCACGCACCTGTGGCGACGTTTGTCGAGCCGTA
TCGAGGGCGGCCACAGCTCAAAGGGATGCGAGTAAGATCAAAGCCAGCCG
GAGCAGGATCGGGTAGGTGCAGAATGAAACGGGTTGTAGCCATGAATAGC
CAATGTTACAGCCGCACATGTGTTTGTCACATGCTATTAGTACATGTGTT
GCAGCATGCTAGTACATGTGTTGTTGCCTACGCGTCGGTAGCCGAATGGT
TTGGATTCTGCTCTTATGTAGCACCAGCAAACATTGAGAACGTCTTTCAA
GTCTCGCGAAGACCGAGGGGGTCAGTGGCGCAAGCCAATGTTTTGTCATT
TTCCCGTAAAGTGACCTGTTGGTCGAAAATCAATGTTATCACTTGGCCCG
TGACCACATTTTTTGTTGTAACAGCACAAGTTCCCAATGCGTGA back to top
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