mRNA_C-linearis_contig89.16426.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: D7FVB1_ECTSI (ABC transporter, ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB1_ECTSI) HSP 1 Score: 1162 bits (3007), Expect = 0.000e+0 Identity = 617/686 (89.94%), Postives = 648/686 (94.46%), Query Frame = 3
Query: 276 MQSSPAVDEEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREHDTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGWKGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDRPPRASDWEHDAEGQGWKGHEAE-KKELTPAEKKAQKALRAAADKERKKKLNAPARIVKIEAMVEELDTKIKSLTDKMYEEGIDAKTVAKIVKDKEAAEARSAKLYAEWEELEELLSEE 2330
MQSSPAVD+EVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEG+CVVK GARMGYLQQKGVSGS+RTVYEEACSEMDTIN + A M+ AE +IE+PM+QKALDR LQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLD++AKTWLGRFLSNYQGTIVTVSHDEALLEG+KLSTVAEVAN RVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKM+LP PPACHT Q IELK ASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLS G+R GEGLK+GVFTQ DLAQDLPQDA+ALELVLDRVREHDTTVS+EQAR+ILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHL DAETLNSLVDAI+GWKGTVVVVSHNKDFVTRL+TTHT+IVEGG VK LDRPPRASDWEHDAEGQGWKG +AE KKELTPAEKKAQKALRAAA+KERKKK+NAP RI KIEA+VEELD+KI +LTD+MYEEGIDA TVA+IVKDK+AAEARSAKLYAEWEELEELL+E+
Sbjct: 1 MQSSPAVDDEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQAHAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQ-----------IELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQ---DLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHL-DAETLNSLVDAIKGWKGTVVVVSHNKDFVTRLSTTHTSIVEGGEVKFLDRPPRASDWEHDAEGQGWKGGDAESKKELTPAEKKAQKALRAAAEKERKKKVNAPGRISKIEALVEELDSKISALTDEMYEEGIDAATVARIVKDKDAAEARSAKLYAEWEELEELLAED 671
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A835Z7Z5_9STRA (ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z5_9STRA) HSP 1 Score: 620 bits (1600), Expect = 5.990e-209 Identity = 350/636 (55.03%), Postives = 437/636 (68.71%), Query Frame = 3
Query: 315 PTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPM---------------------------------DQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEP-----------------------TNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANAT--PLPEGKSSFRAKMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWGDAPPTATGVNLKLEKGQT---------LAILGPNGAGKSTLLKALAGILPLSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREHDTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHL------ADAETLNSLVDAIRGWKGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDRPPRASDWE 2003
P FG TGGAM+VL + ++ +GDTEL+ +DL+VMPGDRVGLVGQNGAGKSTLL IAG R +EG VVK GAR+GYL Q VSGSTRTV+EEA S+MD IND+RA ++AA+ G E + D KAL+ FL + A YEAVGG TQD+ VA++L GLGF +D + C+ FSGGWQMRIALA++LLS+ +LLLLDEP TNHLDS+AKTWLG+++S Y+GT+V VSHDEA +E ++ +T+AEVAN ++EVFK CG+KK+LFERDER+R +K+E EQ+EMAR+Q +DRFGA+ A A R K L KM A A+ P + +A+M+LP PP+CH Q I LK+A++GWG PT GV+LKL KGQ L ILGPNGAGKST L+A+AG+LPL G R GEGL +GVFTQ DLAQDLPQDAVALE VL +VRE+DTT+S+EQAR++LG LGL GPKALR IG LSGGEKARVALAIF MIP+NLL+LDEPSNHL A +TL SLV+A++GW+GTVVVVSHN++FV + THTA+V+GG +++ +R P DWE
Sbjct: 24 PNFGETGGAMIVLEKALLVRGDTELIRGMDLSVMPGDRVGLVGQNGAGKSTLLGAIAGVRRAEEGKIVVKNGARVGYLVQTAVSGSTRTVWEEAASQMDKINDARAAIEAAKAGAAEARVEVDXXXXXXXXXXXXXXXXXXXXARVEADTEGADTKALEEFLDSMAVYEAVGGYTQDKTVAEVLTGLGFEPEDYEAPCTEFSGGWQMRIALARMLLSDSELLLLDEPRAGMLFSDSEXXXXLDEPVNALSTNHLDSAAKTWLGKYVSTYEGTVVVVSHDEAFMEAIRCTTIAEVANCKLEVFK-CGYKKYLFERDERVRLALAKFEREQEEMARMQTVIDRFGAKTMGAKMAADRQKKLDKMAAAASDDPTELKRKVMKARMRLPAPPSCHKDQ-----------ITLKDAAYGWGGDAPTVAGVDLKLLKGQVALALCLPGRLVILGPNGAGKSTTLRAIAGLLPLQSGSRVEGEGLNMGVFTQ---DLAQDLPQDAVALEHVLHKVREYDTTISDEQARNVLGGLGLTGPKALRPIGWLSGGEKARVALAIFSMIPHNLLLLDEPSNHLDTGAWNALRKTLESLVEAVKGWEGTVVVVSHNREFVESIEATHTAVVKGGGMEYHNRAPAPQDWE 644
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A7S4JYL6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JYL6_GUITH) HSP 1 Score: 519 bits (1336), Expect = 1.090e-168 Identity = 306/689 (44.41%), Postives = 433/689 (62.84%), Query Frame = 3
Query: 273 TMQSSPAVDEEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREHDTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGWKGTVVVVSHNKDFVTRLATTHTAIVEG-GMVKHLDRPPRASDWEHDAEGQGW--KGHEAEKKELTPAEKKAQKALRAAADKERKKKLNAPARIVKIEAMVEELDTKIKSLTDKMYEEGIDAKTVAKIVKDKEAAEARSAKLYAEWEELEELLS 2324
+MQ++ + NP FG TGGA++ + + +S G +++ + M GDR+G+VG NGAGKSTLL I R D G V+K +GYL Q VSGS R+ ++EA S M+ I + + A++ + M ++A + AQA +EAVGG ++D+ VA++L GLGF +D + C+ FSGGWQMRIALA+LLLSEPDLLLLDEPTNHLD SAK WL +L Y+GTI+ V+H+ +LL+G+ +T+ EV + R+ VFK C KFL ER R+ A YEA+Q+E+ +LQ ++DRFGA+A+KAS R K L+KME P L G+ R K+ LP PP C R + + +K+A GW + P ++L + +G + ILGPNG GKSTLL ALAG LPL G R +GL LG+FTQ DLAQ+L + AL++V++ V+E D +++ E+AR+ +G+LGL G K+L++IG LSGGEKARVAL++FV++P+NLL+LDEPSNHL D T+++L +A+R ++GTV VV+HN+ F R TH A V G G V +RP R SDWE A + +G AE +K+A++A A KK+ NAP RI KIE + M +G + + + ++ +++ + KLYAEWEELE +LS
Sbjct: 58 SMQTTQEKASKAINPIFGDTGGAILAVEKLSLSAGPRDILLDASFKAMQGDRIGVVGANGAGKSTLLSAIVRTRAWDSGEAVIKPETTVGYLIQTAVSGSKRSAWDEASSGMNKIMAAEERLLKAQEAVEREAMSERAANELASAQAEFEAVGGSSKDQKVARVLNGLGFQREDHNKSCTEFSGGWQMRIALARLLLSEPDLLLLDEPTNHLDMSAKQWLVSYLKEYKGTIMVVTHETSLLDGIACNTILEVRDKRLHVFK-CSHSKFLLERQARVDAAAKAYEAQQREIEKLQSYIDRFGAKASKASXXXXRKKQLEKMEVIDAPESLQTGR---RPKLVLPEPPKC-----------RMEMVVMKDAEIGWSEEKPLYRDLSLSITRGMRVVILGPNGCGKSTLLWALAGRLPLIKGSRTTTDGLSLGLFTQ---DLAQELDPSSTALDVVMETVQEVDPSINTEKARAAMGALGLTGEKSLQQIGTLSGGEKARVALSMFVLVPHNLLLLDEPSNHL-DIPTIDALTEALRDYEGTVAVVTHNRAFCDRFNPTHVAFVRGDGQVSFEERPVRESDWEEVARAESAMAEGMAAEXXXXAAVDKEAKRAAYEA----NKKRGNAPKRIEKIEXXXXXXXXXXAQIDADMVAKGSNVEALYELQSKRDSLQGDLDKLYAEWEELETILS 723
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: W7TQL6_9STRA (Atp-binding cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL6_9STRA) HSP 1 Score: 509 bits (1311), Expect = 9.700e-165 Identity = 315/702 (44.87%), Postives = 431/702 (61.40%), Query Frame = 3
Query: 291 AVDEEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSGG---DRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREHDTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGWKGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDRPPRASDWEHDAEGQG-----------WKGHEAEKKELTPAEKKAQK--------ALRAAADKERKKKLNA-PARIVKIEAMVEELDTKIKSLTDKMYEEGIDAKTVAKIVKDKEAAEARSAKLYAEWEELEELLSE 2327
AV V P +G T GA + L+ V+ G T+L+S V+ + G+RVG+VG NGAGKST+L IAG+ +EG+ V A +GYL Q VSGS R + EEA S+M + ++ + AE + +P D L +AQA + GG +R V IL GLGF D R C+ FSGGWQMRIALA+LLL EP LLLLDEPTNHLDS+AK WL FLS Y GT++ VSH+E LL + +TVAE+ +E+++ CG+ +FL +R+ER AL++ + KE AR+Q F+DRFGA+AT ASAA SR K L+KM PL GK R ++ PPPP + + ++L+NASFG+ A P V+ L +G + +LGPNG GKST+LKAL G LP G +R +GEGL++GVFTQ DLAQDLPQ+ +AL+ VL VR+ D +VS++QAR LG+LGL G KA+R I LSGGEKARVAL++F ++P+NLL+LDEPSNHL D T+ +L +A+ ++GT+VV+SHNK FV RL TH +++ + +R R SDW DA+G KG E+ K +K + + R K+++A P RI K++ ++E+ + K + KMY G D V ++ + KEA + LYAEW+ELE LL+E
Sbjct: 52 AVTTNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTRDPSDANLLS-LERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKATMASAANSRKKTLEKMAIIEAPLAAGK---RPHLRFPPPP-----------KVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQ---DLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHL-DVATMETLSEALAEYRGTLVVISHNKAFVERLKVTHVGLIKNRRLVVEERMLRPSDWSFDAQGGSDARASPVVSTRAKGEESSTKSSRSTTSGREKNDGIPEKPKITYQEQRARFKRISAAPKRIAKLQQIIEDKEKKAEEYGKKMYHAGCDVAKVMELNERKEALASEVESLYAEWDELEALLAE 733
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A448ZLM2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLM2_9STRA) HSP 1 Score: 457 bits (1176), Expect = 3.360e-146 Identity = 271/593 (45.70%), Postives = 382/593 (64.42%), Query Frame = 3
Query: 270 ATMQSSPAVDE-EVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKM--EANATPLPEGKSSFRA--KMKLPPPPACHTKQASNAIRTRGKHI-ELKNASFGWGDA-PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILP--LSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVR---EHDTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGW---KGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDRPPRASDWE 2003
AT+ S+P + E G T GA + L +S+G T L++N++ ++ P +R G+VG NGAGKSTLL I G MDEG +V + R+GYL+Q VSGST+TV EEA SEM I +++ ++AA K + + ++ALD+ AQ +E +GG Q+++V +L GLGF +D RLCS FSGGWQMRIALA+LLLS+P LLLLDEP+NHLDSSAK WLG+++++Y G++V VSHD +LL+ V ++++AE+A N V ++ C + K+L E++ R + +++YE +E ARLQ FVD+FGA ATKA +AQSRVKML+KM E P P + ++ LPPPP + G+++ ++K+A+ G+ + PP +NLK+ +G L + GPNGAGKSTLLKAL G +P + G+R + L LG FTQ DLAQ+L D+ A++LV D R + + V++E AR +LG LGL G K LRK+ LSGGEKARVAL +F + NLLMLDEPSNHL D ++ L A+ W G +VV+SH++ F ++ TH V G + R R SDW+
Sbjct: 39 ATLGSAPPTEAAETFGTVVGDTRGAALRLENVAISRGATPLLNNINWSIQPNERWGIVGINGAGKSTLLGAITGTVRMDEGKALVHSNVRVGYLRQSAVSGSTKTVAEEARSEMTHIEEAKIELEAATKVVEDGDYSEEALDKLATAQEHFETIGGYQQEQMVDSVLKGLGFEPEDSDRLCSDFSGGWQMRIALARLLLSKPSLLLLDEPSNHLDSSAKDWLGKYIASYDGSVVLVSHDVSLLD-VSVNSIAEIAGNTVVEYRSCSYNKYLEEKEFRAASAQAEYERNLEEAARLQAFVDKFGASATKAKSAQSRVKMLEKMKKEGKLDPPPVAVVARERDPELVLPPPP-----------KPNGEYLMKMKDATIGYDPSEPPLLKNINLKIPRGMKLLLRGPNGAGKSTLLKALRGNVPEMIQSGERVENDRLFLGTFTQ---DLAQELDPDSRAVDLVTDYARSGSDGNIRVTDEAARGVLGRLGLGGEKPLRKVSALSGGEKARVALGMFALKASNLLMLDEPSNHL-DVGCISGLAKALSEWGGKDGAIVVISHDRKFCEKVGFTHVGTVMDGKLVLEQRSLRDSDWD 615
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A7S1ELZ7_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELZ7_HEMAN) HSP 1 Score: 458 bits (1178), Expect = 7.420e-146 Identity = 265/567 (46.74%), Postives = 358/567 (63.14%), Query Frame = 3
Query: 312 NPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREHDTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGWKGTVVVVSHNKDFVTRLATTHTAIVEGG----MVKHLDRPPRASDW 2000
NPTFG TGGAM+++N VS+G +LMS V+ +M GDRVGLVG NGAGKS+LL AG P+ G+ +VK G MGYL Q VSGS ++ +EEA S+M I + +D A K + + + +AL+ +AQ + A GG D +A +L GLGF +D + C FSGGWQM+IALA+LLLSEPDLL LDEPTNHLDS+AK WL RF++ Y+GT+V VSH+ +LL G L+ V EV + R F+G + KFL ER+ER+ + ++ RFGA+A+ A++AQS+ K L ++E P +S R K P PP C T S L A+FGW + +++++EKG + ILGPNG GKSTLL AL+G L L G R V E L +G+FTQ DLAQ+LP D AL +VL+ + D + +E+AR+++G+LGL G KAL+KIG +SGGEKARVAL++FV++P+NLL+LDEPSNHL D T+ L +A++ +KG ++VV+HN+ F L TH V G VK R ASDW
Sbjct: 118 NPTFGETGGAMLLMNDVTVSRGPRDLMSGVNWRLMSGDRVGLVGPNGAGKSSLLSAAAGNIPV-MGSVLVKPGVSMGYLIQTAVSGSKKSAWEEAGSQMHRIKRAEKELDVATKAIEDGDISDEALNLMTEAQEAFGAAGGYDVDAKIASVLQGLGFEKEDYHKSCQDFSGGWQMKIALARLLLSEPDLLFLDEPTNHLDSAAKAWLSRFIAEYEGTVVIVSHEVSLLRGAALTHVIEVRDERAHQFRG-SYSKFLVEREERVXXXXXXXXXXXXXXXXXEDYITRFGAKASHAASAQSKKKALDRIERVELPSEISPTSGRPKFSFPRPPVCETAMLS-----------LSKATFGWNNEA-IYKDMDIEIEKGMRMCILGPNGCGKSTLLSALSGRLNLMSGTRKVSEQLDMGLFTQ---DLAQELPLDREALAVVLEHAQRKDPNIISERARAVMGALGLTGSKALQKIGTMSGGEKARVALSMFVLVPHNLLILDEPSNHL-DVGTVEVLTEALQEYKGAMIVVTHNRHFCELLHPTHVCKVVGEPGRQTVKVEARDLAASDW 666
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A7S1YWJ6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YWJ6_9STRA) HSP 1 Score: 448 bits (1153), Expect = 6.510e-143 Identity = 265/593 (44.69%), Postives = 377/593 (63.58%), Query Frame = 3
Query: 261 RVRATMQSSPAVDEEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKM--EANATPLPEGKSSFRA--KMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWG-DAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILP--LSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREH---DTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGW---KGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDRPPRASDW 2000
R+ +T+++ P EEV T G T GA + L +S+G + L+ N++ +V P +R G+VG NGAGKSTLL I G MD G +V+ R+GYL+Q VSGST+TVYEEA SEM I ++RA ++ K + + ++ALD+ AQ +E +GG Q+++V +L GLGF +D +LCS FSGGWQMRIALA+LLLS+P LLLLDEP+NHLDS+A+ WLG++++ Y G++V VSHD L++ ++ +AE+ + ++ C +K++L E++ R + +++YE +E A LQ F+D+F A TK+ +AQSRVKML+KM E P P S ++ LPPPP H + + +KNA G+ + P +NL + +G L + GPNGAGKSTLLKAL G +P + G R + LKLGVFTQ DLAQ+L +DA A++LV RE D TVS+E+AR+++G LGL G K LR++ LSGGEKARVAL++F + P NLLMLDEPSNHL D + L +A+ W G +VV+SH+++F ++ TH V G + RP + SDW
Sbjct: 37 RLFSTVEAPPTEVEEVYGTTIGDTKGAALRLTNVAISRGASSLLKNIEWSVQPKERWGIVGINGAGKSTLLGAITGTVRMDSGQALVQRNERVGYLRQSAVSGSTKTVYEEARSEMTYIEEARAELERTTKVVEDGDYSEEALDKLADAQEKFEVMGGYEQEQMVESVLKGLGFEPEDSDKLCSDFSGGWQMRIALARLLLSKPSLLLLDEPSNHLDSAARDWLGKYVAKYDGSVVLVSHDVGLMDA-SVNNIAEITAGTLIEYRSCTYKRYLEEKEFRALSAQAEYEKNLEEAANLQKFIDKFSA-GTKSKSAQSRVKMLEKMKKEGKLDPPPVAVVSVARIPQLTLPPPPKPHGENL----------LVVKNAVIGYDPNEEPLLKNINLTIPRGMKLLLRGPNGAGKSTLLKALRGNVPEMIQEGARIENDKLKLGVFTQ---DLAQELDKDARAVDLVTSYAREGADGDITVSDEKARNVMGRLGLGGEKPLRQVKALSGGEKARVALSMFALKPSNLLMLDEPSNHL-DVGCIQGLANALSEWGGKDGAIVVISHDREFCEKVGFTHVGTVMDGKLVLEQRPVQDSDW 613
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A7S3VH76_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VH76_9STRA) HSP 1 Score: 447 bits (1151), Expect = 1.990e-142 Identity = 265/592 (44.76%), Postives = 379/592 (64.02%), Query Frame = 3
Query: 270 ATMQSSPAVDEEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKM--EANATPLPEG--KSSFRAKMKLPPPPACHTKQASNAIRTRGKHIE-LKNASFGWG-DAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILP--LSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREH---DTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGW---KGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDRPPRASDWE 2003
A++++ P EEV G T GA + L++ +S+G + L+ N+D +V P +R G+VG NGAGKSTLL I G MD G V + R+GYL+Q VSGSTRTVYEEA SEM I D+R +++A K + + ++AL+ +A+ ++ GG Q+++V +L GLGF +D LC+ FSGGWQMRIALA+LLLS+P LLLLDEP+NHLDS+AK WLG++++NY G++V VSHD L++ ++++AE+ + ++ C + ++L E+ R + +++Y+ +E A LQ F+D+F A TK+ +AQSRVKML+KM E TP P ++ ++ LPPPP + G+++ LKNAS G+ + P T +NL++ +G L + GPNGAGKSTLLKAL G + + G R LKLGVFTQ DLAQ+L +D+ A++LV RE D T++++ ARS++G LGL G K LRKI LSGGEKARVAL++F + NLLMLDEPSNHL D + L +A+ GW G VVV+SH+++F ++ TH V G + RP + SDWE
Sbjct: 48 ASVEAPPTETEEVYGTIVGDTKGAALRLSKVAISRGASPLLKNIDWSVQPNERWGIVGINGAGKSTLLGAITGTVRMDTGAAYVHSNIRVGYLRQSAVSGSTRTVYEEAKSEMTLIEDARVKLESATKIVEDGDYSEEALNELAEAEEEFQTHGGYEQEQMVDSVLKGLGFEPEDSDELCADFSGGWQMRIALARLLLSKPSLLLLDEPSNHLDSAAKDWLGKYIANYDGSVVLVSHDVGLMDA-SVNSIAEITAGTLLEYRSCTYHQYLDEKVFRAESAQAQYQKNLEEAANLQAFIDKFSA-GTKSKSAQSRVKMLEKMKQEGKLTPPPVAIVTTARIPELVLPPPP-----------KPYGENLMVLKNASIGYDPNEEPLLTNINLEIPRGMKLLLRGPNGAGKSTLLKALRGNVESMIQEGSREENVQLKLGVFTQ---DLAQELDKDSTAVDLVTSYAREGADGDVTITDQAARSVMGRLGLGGEKPLRKIAALSGGEKARVALSMFALKASNLLMLDEPSNHL-DVGCIQGLANALSGWGGKDGAVVVISHDREFCEKVGFTHIGTVTNGGIVLEQRPLQESDWE 622
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A7S1UPJ2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UPJ2_9STRA) HSP 1 Score: 447 bits (1151), Expect = 2.390e-142 Identity = 271/591 (45.85%), Postives = 376/591 (63.62%), Query Frame = 3
Query: 270 ATMQSSPAVDEEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKM--EANATPLPEGKSSFRA--KMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWG-DAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILP--LSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREH---DTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGW---KGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDRPPRASDWE 2003
AT++++P V EE T G T GA + L +S+G T L+ N+ +V P +R G+VG NGAGKSTLL I G MDEG +V + R+GYL+Q VSGST+TV EE+ SEM I +++ + + + ++ L+ F AQ +E VGG Q++LV +L GLGF +D RLC+ FSGGWQMRIALA+LLLS+P LLLLDEP+NHLDSSA+ WLG++++ Y G +V VSHD LL+ ++++AE+ N + ++GC + K+L E++ R + +++YE +E ARLQ FVD+FGA ATKA++AQSRVKML+KM E P P S ++ LPPPP K + ++++NA G+ + P ++L + +G L + GPNGAGKSTLLKAL G LP L G R E L+LGVFTQ DLAQ+L +A A++LV RE + +++E+AR+++G L L G K LRK+G LSGGEKARVAL++F + NLLMLDEPSNHL D +N+L A+ GW G VVV+SH++ F + TH V G +K RP + SDW+
Sbjct: 52 ATLKTTP-VQEEKTGTTVGDTRGAALRLEDVAISRGATPLLKNIQWSVQPKERWGIVGPNGAGKSTLLGAITGTVRMDEGKALVGSKVRVGYLKQSAVSGSTKTVAEESMSEMTAIENAKERLRIVSEKLEAGDYEEATLEEFSDAQEEFEQVGGYEQEQLVDTVLKGLGFEPEDSGRLCADFSGGWQMRIALARLLLSQPSLLLLDEPSNHLDSSARDWLGKYIAGYDGAVVLVSHDIGLLDA-GVNSIAEINGNTLIEYRGCAYSKYLEEKEFRATSAQAEYERNLEEAARLQAFVDKFGASATKAASAQSRVKMLEKMKREGKLDPPPVAVISKGRDPELVLPPPP----KPIGEDL------LKVENAVIGYDPNEEPLLKNIDLAIPRGMKLLLRGPNGAGKSTLLKALRGNLPHMLFDGTRTENEKLRLGVFTQ---DLAQELDVNARAIDLVTAYAREGQDGNILITDEKARNVMGRLNLAGDKPLRKVGELSGGEKARVALSMFSLKASNLLMLDEPSNHL-DVGCINALAKALSGWGGKDGAVVVISHDRSFCEEVGFTHVGTVMNGKLKLEQRPLQDSDWD 626
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Match: A0A250WPU3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPU3_9CHLO) HSP 1 Score: 451 bits (1161), Expect = 5.230e-142 Identity = 280/606 (46.20%), Postives = 369/606 (60.89%), Query Frame = 3
Query: 264 VRATMQSSPAVDEEVANPTF--GYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGTCVVKAGARMGYLQQKGVSGSTRTVYEEACSEMDTINDSRAVMDAAEKGMIENPMDQKALDRFLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPD----------LLLLDEPTNHLDSSAKTWLGRFLSNYQGTIVTVSHDEALLEGVKLSTVAEVANNRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQATKASAAQSRVKMLQKMEANATPLPEGKSSF------RAKMKLPPPPACHTKQASNAIRTRGKHIELKNASFGWGDAP-----PTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSGGDRNVGEGLKLGVFTQARSDLAQDLPQDAVALELVLDRVREHDTTVSNEQARSILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLADAETLNSLVDAIRGWKGTVVVVSHNKDFVTRLATTHTAIVEGGMVKHLDR--PPRASDWEH 2006
+A + SP+ ++PT G T GA +V++ V GD +L+ V VMPG+RVGLVG NGAGKSTLL+C+ G R +D G VV MGYL+Q VSGS RTV+EEA S M + + ++++A K M + D A + QA YEA GG T D+ +A +L GLGFS + CS FSGGWQMRIALA+LLLS LLLLDEPTNHLDS+A WLG FL GT + VSHDE LL+ + EV ++ F G +KKFL +R ER L ++ +A+ E+ARLQ FVDRFGA+A+KA+ AQSRVK++ K++ +P SS + +KLP PACHT+ I +K GWG P P ++L +++GQ + +LGPNGAGKSTLLK L+G LPL GG R VG+G+K+ VF+Q DLAQDLP + ALE V + R+ D ++ E+ R LG+LGLQ AL+KIGVLSGGEKARVALA F ++P N+L+LDE SNHL DA T+N L A++ ++G +V ++HN F L TH V G+ D+ SD+EH
Sbjct: 52 TQAVLAPSPS---STSSPTITRGDTAGATMVVDDVWVQVGDRDLLEGVSWRVMPGNRVGLVGANGAGKSTLLRCLTGVRQVDAGRLVVAHKVEMGYLEQTAVSGSDRTVWEEARSRMTELLKAEEMLESAGKAMEQG--DPMAGELLTQANDAYEAAGGPTADKKIANVLTGLGFSFAQYDKKCSEFSGGWQMRIALARLLLSPAGQSATSNGGGGLLLLDEPTNHLDSAAIRWLGSFLKASSGTFIIVSHDEQLLQEA-CDHIVEVRGKKLHQFTG-SYKKFLEQRAERDAQLTAQAQAQADEIARLQVFVDRFGAKASKATQAQSRVKLIDKLKEQQVDVPVASSSAGPGDAKKVTLKLPRAPACHTEV-----------IMVKGGEVGWGSRPSPDTAPLIGNIDLTVKRGQRILVLGPNGAGKSTLLKGLSGTLPLWGGSRKVGDGVKMSVFSQ---DLAQDLPLEKTALEYVEEMARKEDPGITLEKCRQALGALGLQNSMALQKIGVLSGGEKARVALAAFALVPCNVLLLDEASNHL-DAATINVLTGALQDFQGAIVAITHNPAFAASLNATHILRVANGVATLSDKIGDLSDSDFEH 635 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig89.16426.1 >prot_C-linearis_contig89.16426.1 ID=prot_C-linearis_contig89.16426.1|Name=mRNA_C-linearis_contig89.16426.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=775bp MPPRPSKPVRPRMPSTMSALACACALALLRAPTGQSFMTAAGRGRLSSTGback to top mRNA from alignment at C-linearis_contig89:564368..576616+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig89.16426.1 ID=mRNA_C-linearis_contig89.16426.1|Name=mRNA_C-linearis_contig89.16426.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12249bp|location=Sequence derived from alignment at C-linearis_contig89:564368..576616+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig89:564368..576616+ >mRNA_C-linearis_contig89.16426.1 ID=mRNA_C-linearis_contig89.16426.1|Name=mRNA_C-linearis_contig89.16426.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4650bp|location=Sequence derived from alignment at C-linearis_contig89:564368..576616+ (Chordaria linearis ClinC8C monoicous)back to top |