mRNA_C-linearis_contig89.16415.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: D8LH82_ECTSI (HAD-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH82_ECTSI) HSP 1 Score: 292 bits (748), Expect = 6.590e-93 Identity = 154/265 (58.11%), Postives = 187/265 (70.57%), Query Frame = 2
Query: 188 RPRSPTATMASLRSGAGLGQQDEEVDGTNLKAGN------SLVQKP---KGSLSFIKPLPVLVVLDLDKTVWPVYCNEQTLGPYTRS------CGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQK-EIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQYREACLSRASLKDWFTPVPRKSKADGSGRATESSSDG 934
R R + + S G QDE+ K GN SL P +G L LP LVVLDLDKTVWPVYC+E+T GPYTR C S+SAV C +GG+K++RLFP+VV +LRC +Q+ IRLAVASRSP+DEGGAARGILGA+GL+ FCCLEIH GSKA HFQ+IHAAT + YRDMLFFDDEK NI TV +LGVTC+K+SKESGLTFAAVN+GL++YREACLSR+SL+ WFTP K ++ +G+ +DG
Sbjct: 18 RERGASGQRDEISSCVGGPSQDEKTP----KTGNAPPPKSSLENHPAHQEGQLHLTGALPKLVVLDLDKTVWPVYCHEETRGPYTRCLGNTRFCDSESAVECYSSFGGKKVVRLFPDVVALLRCLQQQGSIRLAVASRSPIDEGGAARGILGAVGLLGLFCCLEIHTGSKAKHFQNIHAATGVEYRDMLFFDDEKHNIKTVRRLGVTCIKVSKESGLTFAAVNAGLKEYREACLSRSSLRGWFTPAAPKEDSEHAGQVKRDCADG 278
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: A0A6H5KSC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC5_9PHAE) HSP 1 Score: 291 bits (746), Expect = 1.270e-92 Identity = 157/265 (59.25%), Postives = 187/265 (70.57%), Query Frame = 2
Query: 188 RPRSPTATMASLRSGAGLGQQDEEVDGTNLKAGNSLVQKPK---------GSLSFIKPLPVLVVLDLDKTVWPVYCNEQTLGPYTRS------CGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQK-EIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQYREACLSRASLKDWFTPVPRKSKADGSGRATESSSDG 934
R R + A + S G QDE+ K GN+ +K G L LP LVVLDLDKTVWPVYC+E+T GPYTR C S+S V CS +G K++RLFP+VV +LRC +Q+ IRLAVASRSPVDEGGAARGILGALGL+D FCCLEIH GSKA HFQ+IHAAT + YR+MLFFDDEK NI TV +LGVTCVK+SKESGLTFAAVN+GL++YREACLSR+SL+ WFTPV K ++ G+A S+ G
Sbjct: 18 RERGASGQSAEISSYFGGPSQDEKTP----KTGNAPPKKSSLENHPAHQGGQLHLTGALPKLVVLDLDKTVWPVYCHEETRGPYTRGLGNTHFCNSESTVKCS-SFGREKVVRLFPDVVALLRCLQQQGSIRLAVASRSPVDEGGAARGILGALGLLDLFCCLEIHTGSKAKHFQNIHAATGVEYREMLFFDDEKHNIKTVRRLGVTCVKVSKESGLTFAAVNAGLKKYREACLSRSSLRGWFTPVAPKEDSEHPGQARRDSAHG 277
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: UPI0009E61789 (magnesium-dependent phosphatase 1-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E61789) HSP 1 Score: 111 bits (278), Expect = 3.350e-25 Identity = 64/164 (39.02%), Postives = 98/164 (59.76%), Query Frame = 2
Query: 335 LPVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQY 826
LP LVV DLD T+WP + + P+++ S R G + ++L+ + +DIL+ + KEI LA ASR+ ++ AA+ +L L + F EI+ GSK HF++ A+ IPY +MLFFDDE++NI +S+LGVTCV + SG+ + +GL Q+
Sbjct: 11 LPKLVVFDLDFTLWPFWADTHVSPPFSKKSNG----SVEDRSGYK--IKLYDDTLDILKFLKSKEICLAAASRT--EDPAAAQELLRVLDIDKYFSYKEIYPGSKVTHFREFTQASGIPYSNMLFFDDEETNIDEISRLGVTCVLV--RSGMKHTVLQNGLEQF 164
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: A0A6P3RPI3_PTEVA (magnesium-dependent phosphatase 1 isoform X3 n=3 Tax=Pteropodinae TaxID=77225 RepID=A0A6P3RPI3_PTEVA) HSP 1 Score: 107 bits (268), Expect = 6.560e-24 Identity = 63/167 (37.72%), Postives = 93/167 (55.69%), Query Frame = 2
Query: 335 LPVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQYREA 835
LP L V DLD T+WP + + P+ +S SD V R +I+RL+PEV ++L F + +A ASR+ E AA +L + F EI+ GSK HF+ + T +P+ M+FFDDEK NI VSKLGVTC+ + ++G++ + GL + +A
Sbjct: 4 LPKLAVFDLDYTLWPFWVDTNVDPPFHKS--SDGTV----RDSRGQIIRLYPEVPEVLERFRGLGVPIAAASRT--GETKAANQLLELFDFVRYFVHREIYPGSKVAHFERLQQKTGVPFSQMIFFDDEKRNIVDVSKLGVTCIHV--QNGMSLQTLTQGLETFAKA 160
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: UPI00125D4608 (magnesium-dependent phosphatase 1 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D4608) HSP 1 Score: 105 bits (263), Expect = 6.480e-23 Identity = 69/199 (34.67%), Postives = 97/199 (48.74%), Query Frame = 2
Query: 317 LSFIKPLPVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRG--SKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQYREACLSRASLKD-W--FTPVPRKSKAD 898
L + LP LVV DLD T+WP YC C S R++ +L+P+ IL + K + +A+ASRSP + A L L + F E+ K HFQ IH T +PY++MLFFDDE NI VSK+GVT + + K G+ A+ GL ++ + S K+ W F+ P S+ D
Sbjct: 14 LGMFQVLPRLVVFDLDYTIWPFYCE----------CRSK-----------REMPKLYPQAKGILYALKDKGVNVAIASRSPTPD--IANAFLEKLEMKSMFAAQEVFSSWSHKTEHFQKIHTRTGVPYKEMLFFDDENRNIDAVSKMGVTSILVGK--GVNMGALRQGLLEFTQNFTSSEKNKERWRKFSQKPGSSQGD 187
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: A0A4X2M0B4_VOMUR (Uncharacterized protein n=3 Tax=Metatheria TaxID=9263 RepID=A0A4X2M0B4_VOMUR) HSP 1 Score: 103 bits (258), Expect = 1.450e-22 Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 2
Query: 338 PVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGL 790
P LVV DLD T+WP + + P+ RS D +V R K++RL+PEV D+L + +A ASR+ G A +L L F EI+ G K HF+ + + IPY +M+FFDDEK NI VSKLGVTC+ + E L
Sbjct: 5 PRLVVFDLDYTLWPFWVDTHVEPPFHRS--RDGSV----RDSNEKMVRLYPEVPDVLERLHGLGVTMAAASRTGEIRG--ANQLLELFDLTKYFAYKEIYPGCKVTHFERLQQKSGIPYSEMIFFDDEKRNIIDVSKLGVTCIHVQSEMSL 147
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: A0A6P7VGL4_IXOSC (magnesium-dependent phosphatase 1-like isoform X2 n=4 Tax=Ixodes TaxID=6944 RepID=A0A6P7VGL4_IXOSC) HSP 1 Score: 103 bits (257), Expect = 2.050e-22 Identity = 62/165 (37.58%), Postives = 92/165 (55.76%), Query Frame = 2
Query: 338 PVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQYRE 832
P L+V DLD T+WP +C + + P R G+ R+G R + +FP+V +L C + L +ASR+ D+ AAR ++ L F EI+ G K HF+ H T +PY+ MLFFDDE NI VS LGVTC+ + + G++ + GLR+++E
Sbjct: 5 PKLIVFDLDNTLWP-FCVDTHVTPPFRKEGTGKIYD---RHGKR--INVFPDVPAMLECLTSQRYLLGLASRT--DDPDAARELVTILDWNKYFPYQEIYPGCKITHFKRFHQQTGLPYKQMLFFDDELRNIHDVSTLGVTCIHVQR--GMSHGHLEQGLRRFQE 159
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: A0A293MTA2_ORNER (Uncharacterized protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MTA2_ORNER) HSP 1 Score: 103 bits (256), Expect = 2.680e-22 Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = 2
Query: 338 PVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQYRE 832
P L+V DLD T+WP++ + ++ P R + V G+K+ R+FP+V +IL ++ + ASR+ D+ G AR +LG L F E++ G K HF+ + + IPY+DMLFFDDE NI VSKLGVTCV + + G+T + GLR++ E
Sbjct: 3 PRLIVFDLDYTLWPLHV-DCSVTPPLRKDSNGRIVDLH----GQKV-RVFPDVPEILERLKRDGYTMGAASRT--DDPGTARQLLGLLDWNKYFLYKEMYPGCKVGHFKKFVSDSGIPYKDMLFFDDEHRNIRDVSKLGVTCVYV--KDGMTHKLLEEGLRKFEE 157
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: F6T235_MONDO (Uncharacterized protein n=2 Tax=Didelphinae TaxID=126287 RepID=F6T235_MONDO) HSP 1 Score: 102 bits (254), Expect = 5.210e-22 Identity = 60/152 (39.47%), Postives = 82/152 (53.95%), Query Frame = 2
Query: 335 LPVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRGSKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGL 790
LP L V DLD T+WP + + P+ +S D +V R KI+RL PEV ++L + +A ASR+ +G A +L L F EI+ G K HF+ + + IPY +M+FFDDEK NI VSKLGVTC+ + E L
Sbjct: 4 LPQLAVFDLDYTLWPFWVDTHVEPPFHKS--RDGSV----RDSNEKIIRLCPEVPNVLEHLHGLGVSIAAASRTSEIQG--ANQLLELFNLTQYFAHKEIYPGCKVTHFERLQQKSGIPYSEMIFFDDEKRNIIDVSKLGVTCIHVQSEMSL 147
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Match: A0A5N5I6N7_9ROSA (Magnesium-dependent phosphatase 1 n=11 Tax=Amygdaloideae TaxID=171637 RepID=A0A5N5I6N7_9ROSA) HSP 1 Score: 101 bits (252), Expect = 2.260e-21 Identity = 67/196 (34.18%), Postives = 95/196 (48.47%), Query Frame = 2
Query: 317 LSFIKPLPVLVVLDLDKTVWPVYCNEQTLGPYTRSCGSDSAVSCSFRYGGRKILRLFPEVVDILRCFEQKEIRLAVASRSPVDEGGAARGILGALGLIDKFCCLEIHRG--SKAVHFQDIHAATAIPYRDMLFFDDEKSNITTVSKLGVTCVKLSKESGLTFAAVNSGLRQYREAC-LSRASLKDWFTPVPRKSKA 895
L + LP+LVV DLD T+WP YC C S R++ ++P IL ++K I LA+ASRSP + A+ + L + F EI K HFQ IH T +P+ MLFFDDE NI VSK+GVT + + ++G+ A+ GL +Y E S + + W T + S +
Sbjct: 14 LGMFQVLPLLVVFDLDYTLWPFYCE----------CRSK-----------REMPSMYPHARGILYALKEKGIGLAIASRSPTAD--TAKTFIEKLSVKSMFAAQEIFSSWTHKTDHFQRIHTRTGVPFNSMLFFDDENRNIQAVSKMGVTSILV--DNGVNIGALRQGLTKYTENVNTSEKNKQKWRTKFSKSSSS 184 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig89.16415.1 >prot_C-linearis_contig89.16415.1 ID=prot_C-linearis_contig89.16415.1|Name=mRNA_C-linearis_contig89.16415.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=247bp MASLRSGAGLGQQDEEVDGTNLKAGNSLVQKPKGSLSFIKPLPVLVVLDLback to top mRNA from alignment at C-linearis_contig89:368212..371182+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig89.16415.1 ID=mRNA_C-linearis_contig89.16415.1|Name=mRNA_C-linearis_contig89.16415.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2971bp|location=Sequence derived from alignment at C-linearis_contig89:368212..371182+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig89:368212..371182+ >mRNA_C-linearis_contig89.16415.1 ID=mRNA_C-linearis_contig89.16415.1|Name=mRNA_C-linearis_contig89.16415.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at C-linearis_contig89:368212..371182+ (Chordaria linearis ClinC8C monoicous)back to top |