mRNA_C-linearis_contig89.16405.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig89.16405.1
Unique NamemRNA_C-linearis_contig89.16405.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A6H5JJJ6_9PHAE (GST C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ6_9PHAE)

HSP 1 Score: 672 bits (1735), Expect = 1.490e-236
Identity = 336/440 (76.36%), Postives = 359/440 (81.59%), Query Frame = 1
Query:  157 LLAQADSFAYHPSAASAFSGTGSPVRRAACKEVRHERQRSVMAAHGDGGKGDHYVSEAGAKLNKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTKEGD-------------GVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQLRGVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPSAVFHRKECVTS-PPHFGHDG 1434
            +L  + +F   PS A      GS  R AAC   R  R+RS   A      GDH       KLNKGFGILELAGGLVPQGGLVKTAR GWKFVWLQMMRELAPQSPDG+YVRPNYGFRGW+GRG FP E+GRYH+YVGNTCPWCHRAVLAVVLRGL+P VTFSYM DNPDKASRGGWAFT +EPDPVFG NDLREVYETC PGFKGRCTAPVVVD+KAKKIVTNESS IVRMLN ++  E               GVDLCPAS+EKEID MNDFVY KINNGVYRAGF+TSQAAYEKACRDVFEGL  CEE+LSKNRFL GD+FTEADLRL+PTAVRFDAVYATLFKCSNKRWRDYPAL+AWLRDVYQL GVA+TIDIDGCR SYF+QLFPLNPGGIVPIGPSVEDLGL+E AGRGSQD S VF  KE +   P HFGHDG
Sbjct:   16 VLQLSQAFVPPPSPALIAHTDGSSARHAACGASRPRRRRSAGVAQM--AAGDHDT-----KLNKGFGILELAGGLVPQGGLVKTARAGWKFVWLQMMRELAPQSPDGAYVRPNYGFRGWIGRGAFPVESGRYHVYVGNTCPWCHRAVLAVVLRGLSPAVTFSYMDDNPDKASRGGWAFTRDEPDPVFGCNDLREVYETCSPGFKGRCTAPVVVDRKAKKIVTNESSHIVRMLNDMALAEKGTGGARSGAGNGVVGVDLCPASLEKEIDEMNDFVYEKINNGVYRAGFSTSQAAYEKACRDVFEGLTKCEEILSKNRFLLGDKFTEADLRLIPTAVRFDAVYATLFKCSNKRWRDYPALNAWLRDVYQLSGVAETIDIDGCRLSYFAQLFPLNPGGIVPIGPSVEDLGLDEPAGRGSQDRSVVFWSKEHMPPVPAHFGHDG 448          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A8J9WKW6_9CHLO (Glutathione S-transferase omega-like 2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WKW6_9CHLO)

HSP 1 Score: 434 bits (1115), Expect = 3.080e-143
Identity = 199/358 (55.59%), Postives = 260/358 (72.63%), Query Frame = 1
Query:  343 NKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTKEGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQL-------RGVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPSAVFHRK 1395
            +KGFG+LE  G ++ QG LVK A+ GW F W  MM+ELAPQ+ DGSY RP Y  +G +G   FP E  RYH+YVGN CPWCHR +LA+++RGL P ++F+   D+P++ASRGGW F  ++P+PVF   DLREVY+   PG++GRCTAP++VDK+ +K+V NESS IVRMLN V        DL P     EIDA+ND V+ KINNGVY++GFAT+QAAY +A +++++ L   E+ LS++RFL GDRFTEADLRL PT VR+D +YATLFKC  KR  DYP+L AWLRDVYQ+         +  + D+D  RRSYF+ LFPLNPGGIVP+GP+++DL L+  +GRGS    A+FH +
Sbjct:   58 SKGFGLLEWTGKIISQGTLVKGAKTGWNFAWETMMKELAPQTKDGSYARPTYNLKGVIGSPEFPAETARYHLYVGNACPWCHRVLLALIIRGLLPHISFTLAVDDPERASRGGWVF--DQPEPVFNAKDLREVYDAASPGYRGRCTAPLLVDKRTRKLVCNESSDIVRMLNSVQLPGSTSFDLYPPQFSTEIDAVNDLVHNKINNGVYKSGFATTQAAYARAQQELYDALDIVEQRLSQHRFLIGDRFTEADLRLYPTVVRYDGMYATLFKCCRKRITDYPSLSAWLRDVYQIIIGDASQMQIRTSFDLDEARRSYFTSLFPLNPGGIVPVGPTLQDLALDRESGRGSHSADALFHSR 413          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A835ZE16_9STRA (Glutathione S-transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE16_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 2.060e-137
Identity = 203/367 (55.31%), Postives = 255/367 (69.48%), Query Frame = 1
Query:  337 KLNKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPG-VTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKK-----IVTNESSQIVRMLNGVSTKEGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNK---RWRDYPALHAWLRDVYQLRGVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPS--AVFHRKECV 1404
            KLNKGF +LELAGG+VPQG LVK ARF W  +W  MM ELAPQ P G+YVRP+Y F+G +G   FP E GRYH+Y+G  CPWCHR  L + LR L  G +TFSYM D+P++ASRGGW+FT+E+PDPVFG  DLREVY+ C PG++GRCTAP++VD K        IV+NES  IVRMLN      G+ +DLCP  +E++++  N++VY  INNGVYRAGFAT QA ++KAC DV  GL   E++L + RFL GDR TE+D+ L PTAVRFDAVYA LF  +     R+     +H W+++VY L GV  TID+   RRSY+ QLFPLNPG I+P GPS+EDL    S       P   +VF+ +  V
Sbjct:   12 KLNKGFRVLELAGGVVPQGALVKVARFVWGTLWRIMMAELAPQDPTGAYVRPSYDFKGVIGSPQFPAEPGRYHVYLGQACPWCHRVSLTLALRSLNNGGITFSYMCDDPERASRGGWSFTEEQPDPVFGCGDLREVYQRCSPGYEGRCTAPLIVDSKGGPDGQGAIVSNESKDIVRMLNAAHGLGGNSIDLCPPDLEQQVEETNEWVYRLINNGVYRAGFATLQAGHDKACADVETGLDRAEQILQERRFLNGDRLTESDVFLFPTAVRFDAVYAVLFSFNQTDVCRFAFCFCMHRWMKEVYALPGVPATIDLVDIRRSYYQQLFPLNPGAIIPTGPSIEDLMESGSPSHSGSKPKLESVFYEQSRV 378          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A7S2V351_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V351_9STRA)

HSP 1 Score: 419 bits (1076), Expect = 4.230e-137
Identity = 228/440 (51.82%), Postives = 288/440 (65.45%), Query Frame = 1
Query:  136 NLLTLFALLAQADSFAYH-PSAASAFSGTGSPVRRAACKEVRHERQRSVMAAHGDGGKGDHYVSEAGAKLNKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGM-FPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPG-----VTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVS-TKEGDG--------VDLCPASMEK--EIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQLRGVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGR--GSQDPSAVFHRK 1395
             L+ L  ++ QA +F +H P  AS  S    P     C   R E   S M       +GD   S       +G  ILELAGGLVPQG LVKTAR GW+ +W  M+ ELAPQS DG+Y RP+Y F G +     FP E+GRYH+Y GN CPWCHR +L   LRGL  G     +T S + D+P++ASRGGWAF    PDP FG  DLREVY+ C PGF GRCTAP++VD+K +KIV+N+S+ ++RMLN +  T +G+G        VDL P S EK  E+D +++++Y K++NGVYR GFAT+QAAYE A   VFE L   EEVL K+RFL GD  T +DLRL PT VRFDAVY +LFKCS +R  DY +L +WLRDVYQ+ GV++TIDI  CRRSYF QLFPLNP GI+P GP++++L L E  G   G   P A+ ++K
Sbjct:   17 QLIVLTTVIYQAPAFCFHKPFRASRVS---LPDEVTYCAGRRTELSMSRM-------RGDDRNSPY-----RGLRILELAGGLVPQGALVKTARTGWRELWKAMISELAPQSKDGAYQRPSYSFNGKISESSEFPVESGRYHLYTGNACPWCHRVLLVAKLRGLLDGEKGPFLTHSILSDDPERASRGGWAFDKSRPDPAFGCRDLREVYDLCSPGFTGRCTAPLLVDRKKRKIVSNDSASMMRMLNEIDPTAQGNGETSNDMKTVDLAP-SKEKLAEMDDLDEYIYQKLSNGVYRCGFATTQAAYEDAEAGVFEALDKLEEVLLKSRFLAGDHLTWSDLRLFPTLVRFDAVYTSLFKCSRRRVADYASLTSWLRDVYQIAGVSETIDIPDCRRSYFVQLFPLNPSGIIPAGPTIKELCLTECPGAALGRGKPGALKYKK 440          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A7S0MSR5_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MSR5_9CHLO)

HSP 1 Score: 405 bits (1040), Expect = 4.470e-132
Identity = 201/372 (54.03%), Postives = 253/372 (68.01%), Query Frame = 1
Query:  316 YVSEAGAKLNKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGM---FPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTKEGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQLR---------GVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPSAVFHRK 1395
            + + AG  +  GF +LE AG LVPQ  +VK A+F W+  W   MRELAPQ   G Y RP Y F G +       FP E+GRYH+Y GN CPWCHR +L + LRGL+  V+ + M D+ ++A+RGGW       DPV G  DL  VYE  KPG+ GRCTAPV+ DKK  +IV+NESS IVRMLN V  +EG  VDL P ++ ++ID +N FVY +INNG Y++GFAT+QAAY++A  +++ GL   E +L++ RFL GDRFTEADLRL PT +RFD+ YA LFKC   R  DYP L AW+RDVYQL           VADT D+D  RRSYF QLFPLNPGGIVP GP+++DLGL++ AGRGSQ    V++ K
Sbjct:   44 HCNAAGNDVQGGFKLLEWAGTLVPQSTIVKGAKFTWRTTWEAFMRELAPQDTKGGYARPKYAFTGTISPAPGAEFPVESGRYHLYTGNACPWCHRCLLVLALRGLSGHVSVTRMQDDAERATRGGWIMKGGR-DPVTGAADLYGVYEKAKPGYIGRCTAPVLFDKKTMRIVSNESSDIVRMLNQVDFEEGAAVDLYPEALREDIDRLNAFVYNRINNGAYKSGFATTQAAYDEAQLELYTGLDELEGILAEQRFLTGDRFTEADLRLFPTLMRFDSAYAVLFKCCRARIADYPNLSAWMRDVYQLPVPTEAPDALQVADTFDMDDARRSYFEQLFPLNPGGIVPSGPTLQDLGLDKPAGRGSQKLDDVYYYK 414          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A2P6VFB3_9CHLO (Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFB3_9CHLO)

HSP 1 Score: 412 bits (1058), Expect = 1.190e-131
Identity = 202/361 (55.96%), Postives = 245/361 (67.87%), Query Frame = 1
Query:  346 KGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTK-------EGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQLR------GVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPSAVFH 1389
            +G G+LE  G +VPQG LVKTA+ GW+  W  +M ELAPQS DGSY RP Y F G +G   FP EAGRYH+YVGN CPWCHR +LA+ + GLA  +++S   D+P++ASRGGW F   + DPVFG  DLREVY+   PGF GRCTAP++VD KA+K V NESS I R L  ++          G GVDL PA    EIDA N+ VY  +NNGVY+ GFAT+Q  + KA   +F  L   E VLS+ RFLCG+R TEADLRL PT VRFDAVYATLFKC  +R  D+P L  W+RDV+QL+       +AD +D++  RRSY+ QLFPLNPGGIVP GP+  DLGLE   GRG     A FH
Sbjct:  272 RGLGVLEWTGAIVPQGMLVKTAKLGWRTAWQALMTELAPQSKDGSYQRPAYAFGGRLGTPEFPLEAGRYHLYVGNPCPWCHRVLLALAVTGLAGAISYSRATDDPERASRGGWVFDGPQGDPVFGCKDLREVYDLLSPGFSGRCTAPLLVDVKARKAVCNESSIITRNLIELAAAGGFGAAAPGSGVDLHPAGQGAEIDAWNERVYETVNNGVYKCGFATTQEGFSKAEAQLFTTLGEIEGVLSRQRFLCGERLTEADLRLFPTIVRFDAVYATLFKCCRRRAADFPHLSVWMRDVHQLQVPGSTLQIADCLDLEDARRSYYGQLFPLNPGGIVPSGPTAADLGLETPVGRGPAAAEAAFH 632          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: I0Z7E8_COCSC (Putative glutathione S-transferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z7E8_COCSC)

HSP 1 Score: 400 bits (1029), Expect = 1.600e-131
Identity = 184/331 (55.59%), Postives = 242/331 (73.11%), Query Frame = 1
Query:  418 GWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTKEGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQLR-------GVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPSAVFH 1389
            GW+F W  MM+ELAPQ+ DGSY RP Y  +G +G    P E+GRYH+YVGN CPWCHR +LA+++ GL P V+++   D+P++ASRGGW F  ++ +PVF   DLREVY+   PG++GRCTAP++VDK+ +K+V NESS IVRMLN V        DL PA + +EIDA+ND V+ KINNGVY++GFAT+Q+AY +A ++++  L   E+ LS++RFL GDRFTEADLRL PT VR+D +YATLFKC  KR  DYP L AWLRDVYQ+         ++ + D+D  RRSYF+ LFPLNPGGIVP+GP+++DL L   AGRGS    +VF+
Sbjct:    2 GWQFAWETMMKELAPQTKDGSYARPTYNLKGVIGSPELPAESGRYHLYVGNACPWCHRVLLALIVHGLLPHVSYTMAVDDPERASRGGWVF--DQAEPVFNAKDLREVYDAASPGYRGRCTAPLLVDKRTRKLVCNESSDIVRMLNSVQLPGCTPFDLYPAQLSREIDAINDIVHNKINNGVYKSGFATTQSAYARAQQELYGALDLVEQRLSEHRFLVGDRFTEADLRLYPTVVRYDGMYATLFKCCRKRISDYPNLSAWLRDVYQITVQDASQMQISTSFDLDEARRSYFTSLFPLNPGGIVPVGPTIDDLALHRDAGRGSHSAESVFN 330          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A061S040_9CHLO (Putative glutathione S-transferase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S040_9CHLO)

HSP 1 Score: 401 bits (1030), Expect = 1.150e-130
Identity = 201/358 (56.15%), Postives = 244/358 (68.16%), Query Frame = 1
Query:  343 NKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRG---MFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTKEGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQLR------GVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPSAVFH 1389
            N GFG L  AG +VPQG +VK  + GWK  W  MM+ELAPQS DG Y RP Y F+G +       FP E+GRY +Y+GN CPWCHR  LA+ LRGL+  V      D+ ++ASRGGW F   EP  VFG  DLR VY++  PG+ GRCTAP++VDKK++ IV+NESS I+RMLN +        DL P  +E +I A+ND +YG INNGVYR+GFAT+QAAYE+A   ++  L   EE LS+ RFL GDR TEADLRL PT VRFDAVYA LFKC  +R  DYP L AW+RDV+Q+        VADT  ID  RRSYF QLFPLNPGGIVP GP++E+LGL E + RG +   AV H
Sbjct:   44 NSGFGFLSWAGDVVPQGAVVKGVKSGWKLAWETMMKELAPQSRDGEYSRPTYTFQGRISAAPGSKFPVESGRYAVYLGNACPWCHRVHLAIALRGLSEHVQVIRATDDAERASRGGWVFDQREP--VFGAVDLRGVYDSASPGYTGRCTAPLLVDKKSRCIVSNESSDIMRMLNXMHFPGCTEADLVPPELESDIGALNDMIYGAINNGVYRSGFATTQAAYERAQAALYSALDEVEERLSRGRFLLGDRLTEADLRLFPTVVRFDAVYAVLFKCCRRRVADYPNLSAWMRDVWQIAIDGQPLQVADTFSIDDARRSYFGQLFPLNPGGIVPSGPTLEELGLGEPSLRGPRSLDAVAH 399          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: A0A5J4XXL2_9CHLO (GST N-terminal domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XXL2_9CHLO)

HSP 1 Score: 395 bits (1016), Expect = 3.380e-129
Identity = 194/368 (52.72%), Postives = 249/368 (67.66%), Query Frame = 1
Query:  331 GAKLNKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTKEGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWRDYPALHAWLRDVYQLR------GVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLEESAGRGSQDPSAVFHRKECVTSPP 1416
            G +++KG GILE  G LVPQG LVK A+ GWK  W  MM+ELAPQ+ DGSY RP+Y F+  +G   FP E+GRYHIYVGN CPWCHR VLA+++RGL   ++ ++  D+P++ASRGGW F    P+PVFG NDLREVY+  +  +KGRCTAP+++DKK +K+V+NESS I+RMLN VS    + +DL P+ ++ EID +ND VY KINNGVY++GF+TSQ A                              TEADLRL PT +RFD+ YA LFKCS  R  DYP L AWLRD+YQL+       V D++D+    RSYF QLFPLNPGGIVP GP+++DL L E+ GRGS +  AVFH  +  ++ P
Sbjct:   25 GPEVDKGLGILEWTGSLVPQGLLVKGAKNGWKLAWKTMMKELAPQTADGSYSRPSYDFQARIGDANFPVESGRYHIYVGNACPWCHRVVLALIVRGLTEHISVTWAADDPERASRGGWVFN--SPEPVFGKNDLREVYDAAQTRYKGRCTAPLLIDKKQQKLVSNESSDIMRMLNSVSLPGCNDIDLYPSHLQSEIDEVNDLVYDKINNGVYKSGFSTSQEA-----------------------------LTEADLRLYPTIIRFDSAYAILFKCSKHRVSDYPNLKAWLRDMYQLKVPSSGLQVKDSVDVADACRSYFQQLFPLNPGGIVPAGPTLDDLKLSEAHGRGSPEMGAVFHEHKAPSATP 361          
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Match: B7G1M7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G1M7_PHATC)

HSP 1 Score: 390 bits (1001), Expect = 1.840e-126
Identity = 190/344 (55.23%), Postives = 243/344 (70.64%), Query Frame = 1
Query:  331 GAKLNKGFGILELAGGLVPQGGLVKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGRYHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDEEPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRMLNGVSTKEGDGV---DLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAYEKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATLFKCSNKRWR---DYPALHAWLRDVYQLRGVADTIDIDGCRRSYFSQLFPLNPGGIVPIGPSVEDLGLE 1344
            G K++KGF +LELAGG+VPQG LVKTA+ GWKF+W +MM ELAPQ   G+Y RP+Y F+G +G   FP EAGRYH+Y+GN CPWCHR +LAV L  L  G++ + + DNP+KASRGGW F+  + DP FG  DLREVY+   PG++GRCTAP++VDKK++ IV+NESS IVRMLN V      G+   +L P  + +EID  N++VY  +NNGVYR GFAT+QAAY++A   V EGLA  E+ L    FL GD+F+EADLRLLPT +RFD  YA LF+      R   DYP ++AWL+  + L GV+ +ID+     SY+ QLFPLNP GIVP   +   LGLE
Sbjct:   55 GVKIDKGFNLLELAGGVVPQGNLVKTAKEGWKFIWKRMMAELAPQDETGNYQRPSYKFQGRLGTTEFPDEAGRYHLYLGNPCPWCHRCLLAVNLLNLRDGISLTRLEDNPEKASRGGWIFSATDRDP-FGNKDLREVYDQLSPGYRGRCTAPLLVDKKSRSIVSNESSDIVRMLNSVRLGGDPGIQRFNLYPEELTQEIDKTNEWVYDMVNNGVYRCGFATTQAAYDEASSSVREGLAKVEKQLYNRNFLLGDQFSEADLRLLPTMLRFDCAYAPLFRAGGAHLRIRSDYPEIYAWLKRCWGLEGVSSSIDLPDACGSYYRQLFPLNPSGIVPTPVTAASLGLE 397          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJJ6_9PHAE1.490e-23676.36GST C-terminal domain-containing protein n=1 Tax=E... [more]
A0A8J9WKW6_9CHLO3.080e-14355.59Glutathione S-transferase omega-like 2 n=1 Tax=Coc... [more]
A0A835ZE16_9STRA2.060e-13755.31Glutathione S-transferase n=1 Tax=Tribonema minus ... [more]
A0A7S2V351_9STRA4.230e-13751.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0MSR5_9CHLO4.470e-13254.03Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A2P6VFB3_9CHLO1.190e-13155.96Chlorophyll a-b binding protein, chloroplastic n=1... [more]
I0Z7E8_COCSC1.600e-13155.59Putative glutathione S-transferase n=1 Tax=Coccomy... [more]
A0A061S040_9CHLO1.150e-13056.15Putative glutathione S-transferase n=1 Tax=Tetrase... [more]
A0A5J4XXL2_9CHLO3.380e-12952.72GST N-terminal domain-containing protein n=1 Tax=T... [more]
B7G1M7_PHATC1.840e-12655.23Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig89contigC-linearis_contig89:302805..309958 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score405.6
Seed ortholog evalue3e-110
Seed eggNOG ortholog248742.XP_005651111.1
KEGG koko:K07393
Hectar predicted targeting categorychloroplast
EggNOG free text desc.glutathione s-transferase
EggNOG OGs34JWM@3041,37JC9@33090,COG0435@1,KOG2903@2759
Ec32 ortholog descriptionPutative Glutathione S-transferase
Ec32 orthologEc-24_001030.1
EC1.8.5.7
COG Functional cat.O
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons10
Model size2089
Cds size1338
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig89.16405.1prot_C-linearis_contig89.16405.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig89 303457..309859 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930692.0092666-UTR-C-linearis_contig89:302804..3034561622930692.0092666-UTR-C-linearis_contig89:302804..303456Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 302805..303456 -
1690881199.5318294-UTR-C-linearis_contig89:302804..3034561690881199.5318294-UTR-C-linearis_contig89:302804..303456Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 302805..303456 -
1622930692.2268229-UTR-C-linearis_contig89:309859..3099581622930692.2268229-UTR-C-linearis_contig89:309859..309958Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 309860..309958 -
1690881199.658862-UTR-C-linearis_contig89:309859..3099581690881199.658862-UTR-C-linearis_contig89:309859..309958Chordaria linearis ClinC8C monoicousUTRC-linearis_contig89 309860..309958 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930692.025153-CDS-C-linearis_contig89:303456..3036101622930692.025153-CDS-C-linearis_contig89:303456..303610Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 303457..303610 -
1690881199.5459528-CDS-C-linearis_contig89:303456..3036101690881199.5459528-CDS-C-linearis_contig89:303456..303610Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 303457..303610 -
1622930692.097401-CDS-C-linearis_contig89:304331..3044481622930692.097401-CDS-C-linearis_contig89:304331..304448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 304332..304448 -
1690881199.5563982-CDS-C-linearis_contig89:304331..3044481690881199.5563982-CDS-C-linearis_contig89:304331..304448Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 304332..304448 -
1622930692.1136866-CDS-C-linearis_contig89:304980..3051411622930692.1136866-CDS-C-linearis_contig89:304980..305141Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 304981..305141 -
1690881199.5675797-CDS-C-linearis_contig89:304980..3051411690881199.5675797-CDS-C-linearis_contig89:304980..305141Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 304981..305141 -
1622930692.1303344-CDS-C-linearis_contig89:305370..3054271622930692.1303344-CDS-C-linearis_contig89:305370..305427Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 305371..305427 -
1690881199.58245-CDS-C-linearis_contig89:305370..3054271690881199.58245-CDS-C-linearis_contig89:305370..305427Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 305371..305427 -
1622930692.1432025-CDS-C-linearis_contig89:306099..3062141622930692.1432025-CDS-C-linearis_contig89:306099..306214Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 306100..306214 -
1690881199.5959394-CDS-C-linearis_contig89:306099..3062141690881199.5959394-CDS-C-linearis_contig89:306099..306214Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 306100..306214 -
1622930692.1546197-CDS-C-linearis_contig89:306552..3066121622930692.1546197-CDS-C-linearis_contig89:306552..306612Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 306553..306612 -
1690881199.6086512-CDS-C-linearis_contig89:306552..3066121690881199.6086512-CDS-C-linearis_contig89:306552..306612Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 306553..306612 -
1622930692.1656992-CDS-C-linearis_contig89:307848..3079661622930692.1656992-CDS-C-linearis_contig89:307848..307966Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 307849..307966 -
1690881199.6185284-CDS-C-linearis_contig89:307848..3079661690881199.6185284-CDS-C-linearis_contig89:307848..307966Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 307849..307966 -
1622930692.1872253-CDS-C-linearis_contig89:308390..3085571622930692.1872253-CDS-C-linearis_contig89:308390..308557Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 308391..308557 -
1690881199.6288314-CDS-C-linearis_contig89:308390..3085571690881199.6288314-CDS-C-linearis_contig89:308390..308557Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 308391..308557 -
1622930692.2005177-CDS-C-linearis_contig89:308703..3088421622930692.2005177-CDS-C-linearis_contig89:308703..308842Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 308704..308842 -
1690881199.6400552-CDS-C-linearis_contig89:308703..3088421690881199.6400552-CDS-C-linearis_contig89:308703..308842Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 308704..308842 -
1622930692.2151933-CDS-C-linearis_contig89:309609..3098591622930692.2151933-CDS-C-linearis_contig89:309609..309859Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 309610..309859 -
1690881199.6496546-CDS-C-linearis_contig89:309609..3098591690881199.6496546-CDS-C-linearis_contig89:309609..309859Chordaria linearis ClinC8C monoicousCDSC-linearis_contig89 309610..309859 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig89.16405.1

>prot_C-linearis_contig89.16405.1 ID=prot_C-linearis_contig89.16405.1|Name=mRNA_C-linearis_contig89.16405.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=446bp
MPVMRNRWCAFRNLLTLFALLAQADSFAYHPSAASAFSGTGSPVRRAACK
EVRHERQRSVMAAHGDGGKGDHYVSEAGAKLNKGFGILELAGGLVPQGGL
VKTARFGWKFVWLQMMRELAPQSPDGSYVRPNYGFRGWVGRGMFPQEAGR
YHIYVGNTCPWCHRAVLAVVLRGLAPGVTFSYMHDNPDKASRGGWAFTDE
EPDPVFGVNDLREVYETCKPGFKGRCTAPVVVDKKAKKIVTNESSQIVRM
LNGVSTKEGDGVDLCPASMEKEIDAMNDFVYGKINNGVYRAGFATSQAAY
EKACRDVFEGLAHCEEVLSKNRFLCGDRFTEADLRLLPTAVRFDAVYATL
FKCSNKRWRDYPALHAWLRDVYQLRGVADTIDIDGCRRSYFSQLFPLNPG
GIVPIGPSVEDLGLEESAGRGSQDPSAVFHRKECVTSPPHFGHDG*
back to top

mRNA from alignment at C-linearis_contig89:302805..309958-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig89.16405.1 ID=mRNA_C-linearis_contig89.16405.1|Name=mRNA_C-linearis_contig89.16405.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7154bp|location=Sequence derived from alignment at C-linearis_contig89:302805..309958- (Chordaria linearis ClinC8C monoicous)
GCGCTCTGCCTGCTGCTCCTTGTCCGCTGTGTGCATTGCACAACAGTCAG TGGGCTGGCTCACGTGTAGTCTCGGCACGTTGGTGCGATCTGAGAACCCA TGCCGGTCATGAGGAACCGGTGGTGTGCGTTTCGAAACCTGCTCACGCTG TTCGCGTTGCTTGCTCAGGCCGACAGCTTCGCATATCATCCTTCTGCTGC CTCTGCCTTCTCCGGCACCGGATCCCCAGTTCGGCGCGCCGCTTGCAAAG AAGTTCGCCATGAGAGGCAGCGTTCGGTTATGGCAGCACATGGGGACGGT GGCAAGGGCGATCACTACGTTTCTGAAGCGGGAGCCAAGTTGAACAAAGG TGAGTGAAGCATGTTCCCCCCCACCTTCACCCTTCATTGGCTATATTCTA TCGTCGGGATTGTGTCCACAGGTCGGTGGTTGGTAAGTCTTTTCTTCCTA GCATTGCAAATCCGTACGAAATATGGGGCGGTTTTACTGCTGGGAGAGGC ACGTGCTAACTGCTCGATTTCAACGTAGCCATCCGAGACGAACTGGCTCT ATAAAATGTCGTATCTACAACCAGACCAAGTTTTTTTTCGTCTTCACATT TATTTCCAGAGTTCGCAGGGGCGCCCTTTGCCACGCCGGGCATCTTGCCT GAACATCTGAACCATGGTCACACAGAAGGTTCCTCTCCCTGAGCCCCCCG CCCAACTTCTGCGGTGCTTGCCTGGTAATTTTTAACGCGAGAGAGTTTCA GCCGTCACTCCCTCAAATGTACACGCGAGCTAAGCGCTTTCCACTGACAG GAACGAAAGCTAGAGAAAAAACTCACTAATTTAATGTGTGTGAGAAAAAA TCGCTTGCGTCGGAATTCGAACCCATGAACCTGCATGCTAGATGGTTACG GGGATACCACTGGACCACCGGGGCGACCATTGCTTACATGTTTTCGGCCT TTGTTAGCTAGCGCGCATCAGCTACATGAGTATTGGGCAATCAACACGAA TCCTGCGACGCAACCTCCTCGAACCTATGTATTCAAGATCCCTACCTTGA CCACGGGTGGATCACACCTTAGTTCACGACCCACCAGGTACGAACCCCGT CCCCCGTTTCGGCCAGGTTTCGGCATTTTGGAGCTGGCGGGAGGACTAGT CCCTCAAGGCGGGCTGGTCAAGACTGCGCGGTTTGGCTGGAAATTCGTTT GGCTTCAAATGATGAGAGAACTTGCACCGCAGTCGCCGGACGGGAGCTAC GTCAGGTGGGCGGGAGAGAAGGAAACTCACAAACGCGCAATGATAAGCCT GGATGCCATAGGTTTGGGTGAAACGGAAATGTCGAATGAACCTACCCTGC TGCCGTACGCGTGCTGCTGTTCATGTTCTGCTGTGTTGCATCGCGTGCCA GGCCGAACTACGGATTTCGAGGGTGGGTCGGGCGAGGCATGTTCCCTCAA GAAGCGGGGAGGTACCACATCTACGTTGGCAACACCTGCCCATGGTGCCA CCGGGCTGTCCTGGCGGTTGTTTTGAGAGGCCTGGCCCCCGGCGTAACCT TCTCCTACATGCACGACAGTAAGTTTTAGATTCATCTTCTTCATTGTTAG ACCAAGTTCAGACTTGCGTGAAGAGCACGCGCGCGAGACAGAGGAGTGCG GACAGCGCCAGATCTTGAAGTGACCGCGTTGAAACGTTGAAAGCAAAAGC AACCCGATTAAAGCTGCCGTTCAAGCAGGAACGATAGTGTTTCCCCCCGC AAGCCCACCCCTGACACTGACAAGCGGTACTTGGGATGAAGCTCGCCCTT TGTCTCAAATTGTTACAACGCTTTCCTGGTCACCCAAAACCCGCCGTGCG TGGCCTGGTCGTTGTACAAGTGCGAGAGTCTATGGACTGCTCATAGTCGT GCTGGATAACCCCCTGTTCCCCGCCGCCCTGCAACCGCCGCCTGCCGGAC GGGGTCCTTACCTCAACCTTAACCCTCAAACCTTCAATTTAGACCCGGAC AAGGCGTCTCGGGGTGGCTGGGCATTCACCGATGAAGAACCTGACCCGGT GTTCGGCGTGAACGATCTTCGCGAGGTTTACGAAACCTGCAAACCGGGGT TTAAAGGGAGGTACGCTTTGCTTCGAACCGGAAATTGTGTTGCATTGGAA CACCGCCGTGCTATTCTTGTGTCGGCCGCGCAAAAGGCTGCTAATGGTTC TTCGCCCCTAGTTTCCCCCAGCTGTGTACTGCTGTTGTCCGCACCGAGCA TCTCGATGTCTTGGGACACACGGTGGCGAGTGGCCTTGGGAGGTTATCGT AATATCCTCAGAGATATCCCCCCCCCCTGAACTGCCCCCCCCCCCCGGCA ATTCGACCGAAATGACCCTAAAAACGCTTTGAATTATCCCGGGGACATTT TTTTTTATTTTTTGAACATGCCCCCCCTACCGTAGAGATATCCCCGGGGA CATCTTTTTCTGCGCATAGAAAACGTGTCCCCCGGGGAGGAATGCATGGA ATTCAGTTGTGTCGTCAATTGAAAGCTATCGGGAGAAGGTCCGAGCGTTC GCGGGCTCATTCGTCAGTGCGTCAGCCGTGTAAACTGAAAGTTGATGGTA AACAGATATCGTTCTTTTCAAAACCGGTGCAACGGGTGCAACCGAACCAA ATTCAAACCGCAGCCCTAAAGCCAAATCCATCACTTACAGTTCTCGGTAG TACGGAGCCGATTGCCAACTGCCCACAAGTAATGATCAATACCTAGAACG CACGCACAACGGTAGCCACATGGTGGGCAGTTGAAATCGATTGCAAGAAA GCCGGGAAATATACCACGAACGCCAAGACAAAAGCAGCCAACAACGCTAC TATTGTTCAGCAACGCTTCTCTCTTCTCGTCCACTACGAAGAATCGGCGA TTACACACTACGCATACGGTACAACTCGCGTACAGCAAACACAAACACAC ACTACAGCTCGTCTTCTTCTTCTTCGTCTCCCCCCTCGTCCTTCTCCTCC TCCTCCTCCTCCTCCTCCTTCGGTAGATCTCCCCGGGGCATCTTGTCCCC GGGGTGTTTTTTTTTTGTTTGAAGATGTCCCCCCTACCGTAGAAATAGCC CCGGGGAGACCGTTGTTGGCAAAAAAGATAGATGTCCCCCCGGGGCTATC TCTGAGGATATTACGGTACCCCTAGCTTGCGTTGGACGGGTACCGCCACA GGCTAGGCTGAGACTTGACTGCGACTGCTGTACCTTCCAGCCGTTTTTGT GGGTGTCTCGGGAACTGCAGTTATCTGTTTCTCCATCTTCACTGCTGCTG GCTCTGAACAGATATGGACCCTTTTGCTTGCTTCAACCTTCTTCAGGTGT ACAGCCCCAGTTGTTGTCGACAAGAAAGCCAAGAAGATCGTCACCAACGA ATCCAGGTATGATAGAACCTGAGTCTGTTCTTCACGTAGTGCTTCCACAA GGATGTATTGCTAACCGCCCGGGCAATCGTGCGCGAGGTATGCTTCTTCG CTTCTACACGCATTATCAAAGCGCTTCTCATCATGTTTCTCTCACCTGGT GTGGTAGATGCTTGCCTCAAACACACGCATTGATTTCTTAGCCTGCTAGC TCTCGAGCACCGCCGTGGCCGGCTTGCTATTCAGTATCCAGCCCAATACT GCAGATGCCATTGTTCTTCTAGCCCCGCGTTATTTTACCCGTCAACCTCT GCCTACCCATGCGTTCGATGAAATATGCACACCATGCACGACAGTCAAAT CGTTCGGATGCTGAACGGTGTCAGCACGAAGGAGGGAGACGGTGTGGACT TGTGCCCGGCATCGATGGAGAAGGAGATCGATGCTATGAATGACTTCGTT TACGGCAAGGTGACTTGATCGGCTTCGGTGCACTCCAGTGGTGTTAAGGA CGAGACATGGCCTGGCGGACGACGCCTACCGCGTACCATGTGTTTTTTCA TATCATACTTCGTGTATCAATCTTGTCTGGTTGGTGACGTCATATGTTGA AAGGAATCGTGTTGTGGTTTGTATGCCTCGAGAAACTGCACAGGGTTTCG AGGCTGAGTAGTACGCTCGATTTGTTCAGAGGTGCTTTGAGATGGAACCC TTTCGGAAGGATGAGGGGTTGTCGGCTTGAAGTTAGGCATTGGACCGACA CTACCTGAGTTCATGCGCTCCAAAGGCTGTTGTCGAACGGCAATGGTGGC ATGCCACAACATCCTATACGGTGGATGTTTCCCGGTGGGCCGCATGTGTT AAACAATATCGTGTAAGCGTGGACAGTTTTGAGCGTGGAGACTGGATTTC AGATCACTCCGACAATCTAAACTGCGGCTACAATACTTGAAAGTACAATG TAAACCAAAATCCGTCGTGGCTGCCATGTTGTTGGCATCACTCAGCTACA GCAGTGCGTGCTTCTCCCGAAAACTACAACACAACACTCTGTAGCGGCTT GATTTTTGCGGGAACTCGATTTCGCCCCGAATTTTGCACCATACTACACG CTTTTGTGCACCGCCGCCCCTTCCGGCTCAGATCAACAATGGGGTGTACC GAGCAGGGTTTGCAACGTCACAGGCTGCGTATGAAAAGGTAGGTGATTTT TGGGAACCAGATTGCACTGGTCAACGATTTTTCACTAAGCGCCCGTCCTC CACTGCAAGCTCGCCCCGTTAGCATTGCTGCCAAGTGTGAGGCATCGTGT TGTGTCCTGTGCGCAACTTGAACATAGGGGAAAGGCATACCACGTAGGGT ACCCTATTCAAACTGAAAAATTGTTCACAACGATCTTGTTTTTTTCTGGA TATGCGTCGCACGACAGGCTTGCAGGGACGTGTTCGAAGGGCTTGCGCAT TGCGAGGAAGTGCTTTCCAAAAATCGGTTTCTCTGTGGTGACCGATTCAC TGAGGCGGACCTCCGGCTCTTGCCAACTGCCGTACGCTTCGACGCCGTGT ACGCCACGCTATTCAAGTGCTCCAACAAGTAAGCCAGAGCTTCCCCATCT GAACACTTTGCCACCTTCTTCTGGATTTGTGCGCGATTAATAATGCACCC ATCTTTGACAGGCGTGGCTGACGTGAGGGGATAGTTGTGTGCGCTGTTTC TGTGGGAAAAAAAGCTGCGGTTGATTTTCGCAACATTCCTAGACCGCCAT GGTGATAGATAGTTGATTGTTTTCGGTTCTTGGTTGTGCAGACCCCCGCC TTTTGTTTCCTGCTTGTTTCTAGGAGTATGTAATAGACTCTGAGTGTCGT TAACCACAGTCAGGCAGTCATGAATGTGTGCGCAACTCAAAACCATGACC AAGAACCACGATGCTGATGCTGAAGTGCAATCGAAACCACGCACCGGCAT GTCTTACGGGTATGCTCTCGAAAATGTAGTGCCTTGAGTATACTTCTAGC AGATCCATCGGGAAACATGAGTTGTCATTGTTCATGAAAGAAGAGCTGAC AGATACTAACTGCCTGGTGCTTGTGGGCTCCTGTGTACGCATGCGTGAAT ACGCTATCAGGCGATGGCGGGACTATCCGGCTCTGCACGCGTGGCTGAGA GACGTGTATCAGCTTCGGGGGGTGGCGGACACTATCGACATTGACGGGTG TCGTCGCTCCTACTTCTCCCAACTCTTGTAAGTTTTGTTCGCTTTCGCTT GTTTCGCACAGAACCGCTGCTTTCTTGTCTTGATCAACTGCTGCACCACT GTAAATGGCAAGGGTGCCAAGGCCTATGAGATGTAATTTAGCAGGGAATC CGCCCGTTTTGCCAAATGATGATCCCAGTAGCATGAGCACGTCAAGTGCT TCCCGCTCATTGTTTTCGCTCTCAATCTCTTGAAAGTTGGTGTGTGTCGG CGCTCTCTCTAGAGGAGTAGACTCGCGGCGCTATCTCTGGAGCTATTGGC AACTCTGTCACCTCCCGTGTTGGACGTCGCAGCAGTCGTCAGGTGGAGCA GATGGTGTCACCACTGCTATAGCACCCCTCACTTATTTGACGGGACCGAT TGGATCTTGAAAGAAAACATCGAGGACGCTACAATAAATATTTCGAATGT TCTCAGAGGTATATAGCTGTGCCCACGTTCCAGATGCGGTGTGTGTCAGG CTGTCCTTTGGACTACACACAAAGCCGTTTATAGGGACCAATGTGTTTTC AGGTGTTGATTGGCCAGAGGGAACGCTTGGCGCGCGGGGTTTGGGGGCGG TTTAAAGTACAGGGTGGTACAAAGTTGCTGGTACGGCGATACAGATGACC GCAATCACTCGCTTCGCTATCAGACCTCCAACATTTCCTTACCCTCTTCC GCCTGCGGATGTATGATACTGCTTGCTTTACGTGTACCGCATCGACAGCC CATTGAATCCTGGGGGAATCGTGCCGATAGGGCCTAGCGTAGAGGACCTG GGTCTTGAGGAATCGGCAGGGAGGGGATCCCAAGATCCATCGGCTGTGTT CCACCGAAAGGAATGTGTGACCTCGCCACCACACTTTGGACACGACGGTT AGATGTGCCAAAGTGATCGATCTCAGGGTGATCAGTGACGCCTCGGCGCA AACTCGCGCCGGTTTGTCGGAATTCTGGGACGGCCATGGTCCTAGAGACT CCCGCATCACGAAGGAGAGACCTGGTGGCTATTGTCTTGACAGAATAGGG CCAAGATGAAAGTATGGTTACGCCCGATTGGCCCGGCAACGCCTACTTAA TTTGTTGCATGCGGTGCATCGCTCACAGCTCGACTGGACGGATCCTTGAG AAGATGTTGTTTTTGCGATAGAAAATCAATTGGTCGTTGCTCGCTAGATG TTCCAAATGTTCCAAATGTAGGTTGGGTGCATGTGCTTTTGAATCAATGA TGTTGGTTGGGTAAAAGAGCGAGAAGATGCACGTGGCTTATCGAGAGTGG GGTCCGCTTGTGCCTCCTCGGCGGATTTGTTCAGGGAGAGTTCATGTCCA TCGTCTTAGAACGGTCGCGGGTGCCTTGGCGTAAATGTCTCGGGGTTGGC GTAAGGAACTCTGCGGCGATAACGGTGGTATTTTGCTACGTTGCCGGCCG ATCGAGCCAGCCTGGAGAGGAGAGCTTCAACCCCCCTAATTTACGTACCC GCCGACGAACCGTCCCTTTTTTTTTACAGTTATCAAATCAGAAAATCAAA GAAA
back to top

Coding sequence (CDS) from alignment at C-linearis_contig89:302805..309958-

>mRNA_C-linearis_contig89.16405.1 ID=mRNA_C-linearis_contig89.16405.1|Name=mRNA_C-linearis_contig89.16405.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2676bp|location=Sequence derived from alignment at C-linearis_contig89:302805..309958- (Chordaria linearis ClinC8C monoicous)
ATGCCGGTCATGAGGAACCGGTGGTGTGCGTTTCGAAACCTGCTCACGCT
GTTCGCGTTGCTTGCTCAGGCCGACAGCTTCGCATATCATCCTTCTGCTG
CCTCTGCCTTCTCCGGCACCGGATCCCCAGTTCGGCGCGCCGCTTGCAAA
GAAGTTCGCCATGAGAGGCAGCGTTCGGTTATGGCAGCACATGGGGACGG
TGGCAAGGGCGATCACTACGTTTCTGAAGCGGGAGCCAAGTTGAACAAAG
ATGCCGGTCATGAGGAACCGGTGGTGTGCGTTTCGAAACCTGCTCACGCT
GTTCGCGTTGCTTGCTCAGGCCGACAGCTTCGCATATCATCCTTCTGCTG
CCTCTGCCTTCTCCGGCACCGGATCCCCAGTTCGGCGCGCCGCTTGCAAA
GAAGTTCGCCATGAGAGGCAGCGTTCGGTTATGGCAGCACATGGGGACGG
TGGCAAGGGCGATCACTACGTTTCTGAAGCGGGAGCCAAGTTGAACAAAG
GTTTCGGCATTTTGGAGCTGGCGGGAGGACTAGTCCCTCAAGGCGGGCTG
GTCAAGACTGCGCGGTTTGGCTGGAAATTCGTTTGGCTTCAAATGATGAG
AGAACTTGCACCGCAGTCGCCGGACGGGAGCTACGTCAGGTTTCGGCATT
TTGGAGCTGGCGGGAGGACTAGTCCCTCAAGGCGGGCTGGTCAAGACTGC
GCGGTTTGGCTGGAAATTCGTTTGGCTTCAAATGATGAGAGAACTTGCAC
CGCAGTCGCCGGACGGGAGCTACGTCAGGCCGAACTACGGATTTCGAGGG
TGGGTCGGGCGAGGCATGTTCCCTCAAGAAGCGGGGAGGTACCACATCTA
CGTTGGCAACACCTGCCCATGGTGCCACCGGGCTGTCCTGGCGGTTGTTT
TGAGAGGCCTGGCCCCCGGCGTAACCTTCTCCTACATGCACGACAGCCGA
ACTACGGATTTCGAGGGTGGGTCGGGCGAGGCATGTTCCCTCAAGAAGCG
GGGAGGTACCACATCTACGTTGGCAACACCTGCCCATGGTGCCACCGGGC
TGTCCTGGCGGTTGTTTTGAGAGGCCTGGCCCCCGGCGTAACCTTCTCCT
ACATGCACGACAACCCGGACAAGGCGTCTCGGGGTGGCTGGGCATTCACC
GATGAAGAACCTGACCCGGTGTTCGGCGTGAACGATCTTCGCGAGGTTTA
CGAAACCTGCAAACCGGGGTTTAAAGGGAGACCCGGACAAGGCGTCTCGG
GGTGGCTGGGCATTCACCGATGAAGAACCTGACCCGGTGTTCGGCGTGAA
CGATCTTCGCGAGGTTTACGAAACCTGCAAACCGGGGTTTAAAGGGAGGT
GTACAGCCCCAGTTGTTGTCGACAAGAAAGCCAAGAAGATCGTCACCAAC
GAATCCAGGTGTACAGCCCCAGTTGTTGTCGACAAGAAAGCCAAGAAGAT
CGTCACCAACGAATCCAGTCAAATCGTTCGGATGCTGAACGGTGTCAGCA
CGAAGGAGGGAGACGGTGTGGACTTGTGCCCGGCATCGATGGAGAAGGAG
ATCGATGCTATGAATGACTTCGTTTACGGCAAGTCAAATCGTTCGGATGC
TGAACGGTGTCAGCACGAAGGAGGGAGACGGTGTGGACTTGTGCCCGGCA
TCGATGGAGAAGGAGATCGATGCTATGAATGACTTCGTTTACGGCAAGAT
CAACAATGGGGTGTACCGAGCAGGGTTTGCAACGTCACAGGCTGCGTATG
AAAAGATCAACAATGGGGTGTACCGAGCAGGGTTTGCAACGTCACAGGCT
GCGTATGAAAAGGCTTGCAGGGACGTGTTCGAAGGGCTTGCGCATTGCGA
GGAAGTGCTTTCCAAAAATCGGTTTCTCTGTGGTGACCGATTCACTGAGG
CGGACCTCCGGCTCTTGCCAACTGCCGTACGCTTCGACGCCGTGTACGCC
ACGCTATTCAAGTGCTCCAACAAGCTTGCAGGGACGTGTTCGAAGGGCTT
GCGCATTGCGAGGAAGTGCTTTCCAAAAATCGGTTTCTCTGTGGTGACCG
ATTCACTGAGGCGGACCTCCGGCTCTTGCCAACTGCCGTACGCTTCGACG
CCGTGTACGCCACGCTATTCAAGTGCTCCAACAAGCGATGGCGGGACTAT
CCGGCTCTGCACGCGTGGCTGAGAGACGTGTATCAGCTTCGGGGGGTGGC
GGACACTATCGACATTGACGGGTGTCGTCGCTCCTACTTCTCCCAACTCT
TGCGATGGCGGGACTATCCGGCTCTGCACGCGTGGCTGAGAGACGTGTAT
CAGCTTCGGGGGGTGGCGGACACTATCGACATTGACGGGTGTCGTCGCTC
CTACTTCTCCCAACTCTTCCCATTGAATCCTGGGGGAATCGTGCCGATAG
GGCCTAGCGTAGAGGACCTGGGTCTTGAGGAATCGGCAGGGAGGGGATCC
CAAGATCCATCGGCTGTGTTCCACCGAAAGGAATGTGTGACCTCGCCACC
ACACTTTGGACACGACGGTTAGCCCATTGAATCCTGGGGGAATCGTGCCG
ATAGGGCCTAGCGTAGAGGACCTGGGTCTTGAGGAATCGGCAGGGAGGGG
ATCCCAAGATCCATCGGCTGTGTTCCACCGAAAGGAATGTGTGACCTCGC
CACCACACTTTGGACACGACGGTTAG
back to top