mRNA_C-linearis_contig89.16402.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A835ZGE5_9STRA (J domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE5_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.460e-71 Identity = 134/265 (50.57%), Postives = 172/265 (64.91%), Query Frame = 1
Query: 172 TATPASIKKAYFKLALKCHPDKCPGDEDAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASA----GSKKSAGKRKAKEAAEAEELMAMIKGRHEERNAASLS----THRARDFTSLVSSLEERYG----GKKGGKKESKRAKQPPPDLDDAEFERIQKQLEKGKSS 930
+AT + IKKAYFKLALKCHPDKCPGDE A RFQAL +VHSVLSDPERRALYDETG+VA+ E + W EY+R LFPK+T +DI+ F +Y+GS+EEK D+++AY KG M ++D++ML D RF TVI+ AI + +V S+ AF+ + S G K + KEA EAEEL A++KG + RNA T A+ F S+++SLE RY GKK A + PPD+DDAEFERIQ +L +G S
Sbjct: 6 SATESQIKKAYFKLALKCHPDKCPGDESAHTRFQALGMVHSVLSDPERRALYDETGEVADGEGEFNQANFDMWYEYYRNLFPKVTTSDIDKFKGEYQGSEEEKGDIIKAYVACKGDMAKVIDTVMLSGNDDAARFGTVIEEAIAAGDVKSYAAFKTSLSKLTRPGKKAKTSAKAEKEAKEAEELAALLKGNADRRNAGGGGGGQLTRGAQHFDSMIASLEGRYASGGAGKKAXXXXXXAAPEGPPDMDDAEFERIQARLMQGAKS 270
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A7S2Y545_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y545_9STRA) HSP 1 Score: 208 bits (529), Expect = 2.770e-62 Identity = 125/286 (43.71%), Postives = 176/286 (61.54%), Query Frame = 1
Query: 109 DSIAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQE--GQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGKRKAKEAAEA----------EELMAMIKGRHEERNAASLSTHRARDFTSLVSSLEERYGGK------KGGKKESKRAKQPPPDLDDAEFERIQKQL 912
D I + FG SLY+IL VP TA+ + IKKAYFK ALKCHPDKCPGDE AK RFQALS VH+VLS+P+ R++YDETG++ ++ + G + G WS+YWR LFP++T A I SF KY+GSDEE+ DV+ AY G + ++D++ML + DE+RF+ +ID AI+S E++ KK+ +KA+ E L +++ RH+E S+ +HR + FTS++ SLEE+Y K K GK K + P+ D EF+ IQ++L
Sbjct: 3 DQIQSMFGHELSLYDILGVPPTASASQIKKAYFKAALKCHPDKCPGDEAAKNRFQALSSVHAVLSNPDLRSIYDETGEIGDDSENMGGMNGDDG-WSDYWRMLFPRVTTAGISSFQQKYQGSDEERADVIAAYNDFNGDIMAVIDNVMLASSDDEDRFQAIIDYAIDSGEIAKKR----------KKTPKSQKARXXXXXXXXXXXXXXXEMLAEIMRKRHQEN--LSIVSHRRQQFTSMIDSLEEKYSSKEKKTKKKSGKNRQKHQEFEEPNED--EFKSIQERL 273
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A1V9ZBC7_9STRA (J domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBC7_9STRA) HSP 1 Score: 197 bits (500), Expect = 4.900e-58 Identity = 116/251 (46.22%), Postives = 156/251 (62.15%), Query Frame = 1
Query: 103 SMDSIAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGKRKAKEAAEAEELMAMIKGRHEERNAASLSTHRARDFTSLVSSLEERYGGKKGGKKESKRA 855
+MD++AA FG + LY +L V TAT + +K AY K ALK HPDK P D +A +FQ L +HS LS+PE RA+YDETG++ E E W +YWR LFPK+T DI+SF Y+GSDEE +DVL AY+K+KGKM +I+D IML + D +RF +I AI+++EV +PAF K A K+ K+ EA AEEL+A I+G NA R + F S++S LE +Y + KK K+A
Sbjct: 7 TMDAVAAHFGT-RDLYAVLGVKDTATESELKTAYRKKALKFHPDKNPDDAEATTKFQLLCTIHSALSNPELRAVYDETGELETEATE--TASFRDWLDYWRMLFPKVTEKDIQSFETSYRGSDEEAQDVLNAYQKYKGKMQSILDVIMLSTDNDIDRFAEIIQEAIDADEVPLYPAFNKRPKAS--KARSKKAEAEAKAAEELIAKIRG-----NAGGALAKRQQGFASILSGLESKYADEPKSKKTKKKA 247
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A1W0A4M0_9STRA (J domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4M0_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.160e-57 Identity = 120/273 (43.96%), Postives = 168/273 (61.54%), Query Frame = 1
Query: 94 VTVSMDSIAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGKRKAKEAAEAEELMAMIKGRHEERNAASLSTHRARDFTSLVSSLEERYGGKKGGKKESKRAKQPPPDLDDAEFERIQKQL 912
+T +M+ I FGE + LY IL V T T + +K AY K ALK HPDK P D +A +FQ L +HS LS+P+ RA+YDETG++ E E + W EYWR LFPK+TV DIE+F Y+ S+EE +DVL+AY+K+KGKM +I+D IML E D ERF +I AI++ EV +PAF+K A K K+ EA AEELMA I+G+ + R + F SL+S+LE +Y + KK+ K++ P+ + EF+ Q+++
Sbjct: 1 MTTTMEKIEQHFGE-RDLYAILGVKKTCTASELKTAYRKTALKFHPDKNPDDPEATTKFQLLCTIHSSLSNPDLRAVYDETGELEVEATETASFK--DWLEYWRALFPKVTVKDIENFETSYRDSEEEAQDVLKAYEKYKGKMQSILDVIMLSTENDIERFSDIIQRAIDAEEVPMYPAFKKKPKA---KRNNKKAEAEAKAAEELMAKIRGKAD----GGALAKRQQGFASLLSNLEAKYADEPKSKKQKKKSN---PEPSEEEFQAAQRRV 260
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: K3WTQ8_GLOUD (J domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTQ8_GLOUD) HSP 1 Score: 196 bits (498), Expect = 2.210e-57 Identity = 123/274 (44.89%), Postives = 173/274 (63.14%), Query Frame = 1
Query: 97 TVSMDSIAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDAKG----RFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQ-WSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFR-----------KAASAGSKKSAGKRKAKEAAEAEELMAMIKGRHEER----NAASLSTHRARDFTSLVSSLEERYGGKKGGKKESKRAK 858
+ S + I A+FG+G LYE+L V +AT I +AY KLALK HPDK GDE +K +FQALS +H++L+D E RA YDETG + + E ++ Q W +Y+ +FPK++ ADI F ++Y+ SDEE+RDVL+AY K KG M +I+D+IML E DEERF +I+ AI++ EV S P +R K SA +K +K KEA EAEELM ++G +ER + ++LS+ R R F SL++SLE RY K G K +K+++
Sbjct: 3 SASGELIYAQFGDGCDLYEVLGVDKSATEKEITRAYRKLALKYHPDKHRGDETSKAESTAKFQALSAIHALLNDAEARAYYDETGSIMDS--ETDKSPSFQMWVDYFARIFPKVSEADITKFSDEYRFSDEEQRDVLDAYSKLKGHMQSILDTIMLSTEDDEERFAEMIEKAIKNKEVKSLPKWREYVRAKASKPKKQESAAQQKRKQAKKDKEAREAEELMRKVRGNQQERANGGSVSTLSSKRERGFESLLASLETRYAEKPGKGKSAKKSR 274
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: G4YKX5_PHYSP (J domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4YKX5_PHYSP) HSP 1 Score: 191 bits (484), Expect = 2.320e-55 Identity = 121/285 (42.46%), Postives = 169/285 (59.30%), Query Frame = 1
Query: 115 IAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDAKGR----FQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGKRKA-----------KEAAEAEELMAMIKGRHEERNAAS----LSTHRARDFTSLVSSLEERYGGKKGGKKESKRAKQPPPDLDDAEFERIQKQL 912
I AEFG+ LY +L V +AT I +AY KLALK HPDK GDE A+ + FQA+S +HS+LSD E RA+YDE+G + + + + W++Y+ +FPK+T DI F +Y+ SDEE+RDVL+AY K++GKM ++D+IML + DEERF +I A++ EV +FP + + + SKK K KEA EAEEL I+G ++R S LST R R F SL+ +LE +Y +KG K + K A Q P + + EF QK+L
Sbjct: 6 IHAEFGDDCDLYAVLGVERSATDKEITRAYRKLALKYHPDKQRGDEAARAKATAKFQAVSAIHSILSDKEARAVYDESGTILSDDHDDKSPSFQMWTQYFARVFPKVTTEDIARFEGEYRHSDEERRDVLDAYTKYEGKMKHVMDTIMLSTDDDEERFAEMIQKAVKEKEVKAFPTWCEYSKEQSKKKKRKETPAEQXXXXXXXXKEAREAEELFNKIRGNQQKRGEGSGSTALSTERKRGFESLLGNLEAKYA-EKGKKSKRKAAPQDPGEPSEEEFLAAQKRL 289
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A4D9D5G5_9STRA (J domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5G5_9STRA) HSP 1 Score: 191 bits (484), Expect = 2.990e-55 Identity = 121/295 (41.02%), Postives = 163/295 (55.25%), Query Frame = 1
Query: 94 VTVSMDSIAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGKRKAKEAAEAEELMAMIKGRHEERNAASLSTHRARDFTSLVSSLEERYG-GKK---------GGK--------KESKRAKQPPPDLDDAEFERIQKQLEKGK 924
+T +A FGE K+LYEIL V A A I+KAYFK+AL CHPDKCP D +A RFQALS+VH+ LSD +R YDETG++ E E ++E +W EYWR LFP +TV I F +Y+ S+EE RDVL AY++ +GKM ++D++ML + DE RFR +I+ AI + V F F+ A I+ R A++ R + +S + SLEE+YG GKK GGK +E R Q D+DDA+FER++ L K K
Sbjct: 7 MTTPQAQVAKAFGEKKTLYEILGVAKDAASAVIRKAYFKMALTCHPDKCPEDPEATARFQALSIVHATLSDTNKRRNYDETGEIGSEDAELNQSEQ-EWYEYWRALFPTVTVEKINRFQEEYRESEEEARDVLRAYEEAQGKMSLVIDNVMLATDGDEGRFRKMIEEAITNKRVKRFKCFK--ADVRKDLXXXXXXXXXXXXXXXXXXXIQARRGPDALATMGRDRQQQMSSFLQSLEEKYGKGKKVGGSGCKEAGGKGRKRDREAREGARGSQRTEDIDDADFERLRDSLSKKK 298
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A067CTY9_SAPPC (J domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTY9_SAPPC) HSP 1 Score: 189 bits (481), Expect = 3.160e-55 Identity = 108/231 (46.75%), Postives = 150/231 (64.94%), Query Frame = 1
Query: 103 SMDSIAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGKRKAKEAAEAEELMAMIKGRHEERNAASLSTHRARDFTSLV 795
+MD++ A FG+ + LY IL V ++ATPA +K AY K ALK HPDK P D+DA +FQ L +H+ LS+PE RA+Y+ETG++ E E + W +YWR LFPK+T DI+SF Y+ SDEE +DVL+AY+K+KGKM +I+D +ML + D +RF +I AI++NEV +PAF K K K+ A EA AEEL+A I+G N A+ + R + F SL+
Sbjct: 5 TMDAVEASFGQ-RDLYAILGVKASATPAQLKTAYRKKALKYHPDKNPDDDDATTKFQLLCTIHAALSNPELRAVYEETGELETEATE--TSSFRDWVDYWRNLFPKVTTKDIQSFEKTYRESDEEAQDVLQAYEKYKGKMQSILDVVMLSTDDDIDRFTKIIQDAIDANEVPLYPAFTKKIKTKGK---SKKAAAEAKAAEELLAQIRG-----NQAAALSKRQQGFASLL 224
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A3M6VAS7_9STRA (J domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAS7_9STRA) HSP 1 Score: 189 bits (480), Expect = 9.710e-55 Identity = 122/293 (41.64%), Postives = 178/293 (60.75%), Query Frame = 1
Query: 115 IAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDE----DAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGK-----RKAKE------AAEAEELMAMIKG----RHEERNAASLSTHRARDFTSLVSSLEERYGGKKGGKKESKRAKQPPPDLDDAEFERIQKQLEKGKSSSQ 936
I AEFG+ LY ++ V +AT I +AY KLALK HPDK GD+ A +FQA+S +HS+LSD E RA+YDE+G + + + + + W++Y+ +FPK+++ DI+ F +Y+ SDEE+RDVL AY K++GKM I+D+IML + DEERF +I AI+ E+ +FP +R+ SKK+ K +K K+ A EAEEL+ I+G R EE ++ +LST R R+F SL+ SLE +Y K G K + K A Q + EF QK+L + K ++
Sbjct: 6 IRAEFGDDCDLYAVMGVSRSATDKEITRAYRKLALKYHPDKQRGDKASCIKATAKFQAVSAIHSILSDKEARAVYDESGTILSDDHDNKTSSFQMWTQYFARIFPKVSMEDIDRFEGEYRHSDEERRDVLSAYTKYEGKMQQILDTIMLSTDDDEERFAEMIRKAIKEKELKTFPTWREYVKKQSKKTKRKETPVEQKRKQXXXXXXAREAEELLKKIQGNQKKRGEESDSTALSTERKREFKSLLGSLEAKYTDK-GKKSKRKAASQDLGEPSKEEFLAAQKRLNRSKKCAE 297
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Match: A0A6A3UWZ9_9STRA (J domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UWZ9_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.830e-54 Identity = 119/289 (41.18%), Postives = 170/289 (58.82%), Query Frame = 1
Query: 115 IAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDE----DAKGRFQALSLVHSVLSDPERRALYDETGDVAEEGQEGQRTEGGQWSEYWRTLFPKITVADIESFGNKYKGSDEEKRDVLEAYKKHKGKMGTIVDSIMLGAEADEERFRTVIDAAIESNEVSSFPAFRKAASAGSKKSAGK-----------RKAKEAAEAEELMAMIKGRHEERNAAS----LSTHRARDFTSLVSSLEERYGGKKGGKKESKRAKQPPPDLDDAEFERIQKQLEKGK 924
I AEFG+ LY +L V +AT + +AY KLALK HPDK GDE A +FQA+S +HS+LSD E RA+YDE+G + + + + W++Y+ +FPK+T DI F +++ SDEE+RDVL+AY K++G+M ++D+IML + DEERF +I AI+ EV +FP +R+ +KK K ++ KEA EAEEL I+G + R S LST R R F SLV SLE +Y +K K + K Q P + + EF QK+L++ +
Sbjct: 6 IHAEFGDDCDLYTVLGVERSATDKELTRAYRKLALKYHPDKQRGDEASRAKATAKFQAVSAIHSILSDKEARAVYDESGTILSDEHDAKPPSFQMWTQYFARMFPKVTTEDIARFEGEFRHSDEERRDVLDAYTKYEGEMQHVMDTIMLSTDDDEERFAEMIQEAIKEKEVKAFPTWREYVKEQAKKKRKKETPAQQKRKQAKREKEAREAEELFNKIRGNQQNRGEGSGSTALSTERKRGFESLVGSLEAKYA-EKDKKSKRKATPQDPGEPSEEEFLAAQKRLKRSR 293 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig89.16402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig89.16402.1 >prot_C-linearis_contig89.16402.1 ID=prot_C-linearis_contig89.16402.1|Name=mRNA_C-linearis_contig89.16402.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=279bp MDSIAAEFGEGKSLYEILDVPSTATPASIKKAYFKLALKCHPDKCPGDEDback to top mRNA from alignment at C-linearis_contig89:256843..259774+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig89.16402.1 ID=mRNA_C-linearis_contig89.16402.1|Name=mRNA_C-linearis_contig89.16402.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2932bp|location=Sequence derived from alignment at C-linearis_contig89:256843..259774+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig89:256843..259774+ >mRNA_C-linearis_contig89.16402.1 ID=mRNA_C-linearis_contig89.16402.1|Name=mRNA_C-linearis_contig89.16402.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at C-linearis_contig89:256843..259774+ (Chordaria linearis ClinC8C monoicous)back to top |