mRNA_C-linearis_contig88.16348.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: D8LJW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW1_ECTSI) HSP 1 Score: 969 bits (2504), Expect = 0.000e+0 Identity = 764/1384 (55.20%), Postives = 842/1384 (60.84%), Query Frame = 1
Query: 973 GASPMRPRFITPGRSRKSAFAAKGRSSSFGGGSTLGF-TASPSRPRANSIVARPHRLPLSAAALEAASHAVGLSTALGYAPP--AMDPHRGVTARAVYRAAELLYSRHALGLRWSKGALAVAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSGGGRAAKEANHAWQWGADLEVRSWGSSGTGGKAAAGRDTGGGKDAGASGGGGDDDVSGRVSPRRISQNGELEDMPQIGDLAD--GTKSTTAAPEPAGGEGGXXXTGAETSTA-PGKSRIEVKTVVSPR-HSSMYSAAPKALATRKVLPLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGKDTSKTPLPSDLRQLSRVIHARLNEESTRCSKAWSAFAKSTFECGRRDLIALREEWVRGTTRAWSGQCLEIMSQDRSGLVRLNQTLLEPDGFLPLRARAGIRLKRRASPTGXXXXXXXXXXXXXXXXXXXXNGDDYPGGGAXXXXXXXXXGARFSSGMARLKRSGEASA---------APTPRVPSL--LTLTPKDQST---TSAWGGRSPWMNGSTPQGSEH-GWLSRIASGGGGSVSS-------PTGSTSSLSFSGASTTEPS-IAGEGMVVHLPPPPQSLLPVFDRELHGFDSSARE-DEQWGELPFLVVESWGGLGE----DAPP-EPAPLSPMLGGDEYRLFQEIASNSMHHKKPPLMPNGK------------------------AGGRSNANSRATTNGTASTX-----NSNKKAPXXXXXXXXXXXXXXXXXXXXXXXXRAAPKRQQRGPKYYTARRSKPMRAPSLPSRGSDDGSYGSDHGGPSANSHRKGVSPGSGFASDSAGDLSTGYSSSDDVWSGTDSSRASGEDGGKGDGDAKKKRTRRDEIQKRMWGKRPSWTGALIEPAASAATAXXXXXSVPGATAREAAGAASAPRTESGLNHLIVLVHGLGGRPADMALMRSYLQTLMPGAELMVATSLQDVRKDNLGVEAMGKKLAEEVHNHVTRFCPYLGSAFVPVPTVAVPTANAGSLPLSPVTPMRPPRRGSHAPSPVVSR--ASPGSAAAARSVSEELGXXXXXXXXXXTPSRPPRRSASGVGGASSAGG-VPQSKGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDAXXXXXXXXXXXXXXXXXXXAEMAEMLMSKSQGAIDTVIGRAGHMCFIDSAPVAWLLSLALLPFLEENVDRSSS 4920
G SP+RPRFITPGR R+SAF KGRS+S G+ LG ++SP R RA S RP+RLPLSAAALEAAS AVGL+TALGYAPP A + RG+T RAVYRAAELLYSRHALGLRWSKGAL VA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D + + S RR++ NGELED+ G+ A G + XX A +TA K R+E++ V SPR S AAP+ + PG XXXXXXXXXXXXXXXXXXXXXXXXXXX K KTPLPSDLRQLSRVIHARLNEES+ C KAWSAFAKSTFECGRRDLIALREEWVR TTRAWSGQCLEI QD LVRLNQTLL+PDGFLPLRA+AG+RLKRRASPT XXXXXXXXX GG S+G+ARLK +S A +PS ++TPK QST TS WG S W+NG+TPQ +E GWLSRIASG PTGS+SS +FSGAST EPS + GM +H PPPPQSLLPVFDR+LHGFDS+AR+ D++WGELPFLVVESWGG GE D PP EPAPLSPM GGDE+RLFQEIASNS+H KKP A G S+AN + G +S +S+ AP P R QRGPKYYTARR P RAPSLP RR+EIQ+RMWGKRPSWTGALIEP A+AA XXXXXSVPGATARE AGA++APRTESGLNHLIVLVHGLGGRPADMAL+RSYLQTLMPGAELMVA+SLQ VRKDNLGVEAMGK LAEEVHNHVTRFCPYL +AFVPVP PT NAGS+PLSP + + A PGSAAAAR++SEEL TP+RPP+ VPQSKGMLSFVCFSLGGLVAR+ALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDA+DPRET LYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPP+ AEMAEMLMSKSQGA+DTVIGRAGHMCFI+S+ VAWL+SLALLPFLEE+ DRS++
Sbjct: 4 GPSPLRPRFITPGRLRRSAFVRKGRSASMSAGTALGLISSSPDRRRAKSSATRPYRLPLSAAALEAASLAVGLATALGYAPPPVATESDRGITVRAVYRAAELLYSRHALGLRWSKGALVVAKTAAAANAAEMSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------DNAPQPSLRRLNSNGELEDVEAPGEAASDQGMMTIEXXXXXXXXXXXXXMEAALLTTARASKGRLEIRAVASPRVRPSAAQAAPRMVPPSPRPVPPGKAWPKLPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXNQGDPAEEDGAAVAWTWGGGDAGARDK---------------KVGGKTPLPSDLRQLSRVIHARLNEESSACMKAWSAFAKSTFECGRRDLIALREEWVRDTTRAWSGQCLEITPQDGVDLVRLNQTLLDPDGFLPLRAKAGVRLKRRASPTRGGAGAGGRIRSXXXXXXXXXXXXXXSGGRGNRGG--------LSNGIARLKAMSTSSGTWSDAKVYGAAAAAIPSSWSTSVTPKGQSTAATTSPWGTVSTWVNGTTPQRAEQQGWLSRIASGXXXXXXXXXXXXXXPTGSSSSFTFSGASTAEPSPVLRPGMFMHFPPPPQSLLPVFDRDLHGFDSAARDLDDRWGELPFLVVESWGGSGEEPKTDLPPQEPAPLSPMQGGDEFRLFQEIASNSLHRKKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGTSSANGGSANTGMSSRIQVKMASSSGYAPSDEDSSPALAKST------------GKPTRHQRGPKYYTARRRPPSRAPSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------XRRNEIQRRMWGKRPSWTGALIEPTAAAAXXXXXXXSVPGATAREGAGASAAPRTESGLNHLIVLVHGLGGRPADMALIRSYLQTLMPGAELMVASSLQGVRKDNLGVEAMGKLLAEEVHNHVTRFCPYLENAFVPVPAPGGPTPNAGSVPLSPXXXXXXXXXXXXXXNLASTAVCAPPGSAAAARTISEEL------RAGMGTPTRPPKGGXXXXXXXXXXXXXVPQSKGMLSFVCFSLGGLVARSALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDADDPRETALYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPEGDAGGSSAGHTSAVS-----AEMAEMLMSKSQGALDTVIGRAGHMCFIESSQVAWLVSLALLPFLEESADRSAA 1300
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: A0A6H5K5M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M7_9PHAE) HSP 1 Score: 810 bits (2092), Expect = 1.720e-267 Identity = 597/1138 (52.46%), Postives = 656/1138 (57.64%), Query Frame = 1
Query: 2224 RVIHARLNEESTRCSKAWSAFAKSTFECGRRDLIALREEWVRGTTRAWSGQCLEIMSQDRSGLVRLNQTLLEPDGFLPLRARAGIRLKRRASPTGXXXXXXXXXXXXXXXXXXXXNGDDYPGGGAXXXXXXXXXGAR--FSSGMARLKR-----------------------SGEASAAPTPR-------------------------------------------------------------------------VPSL--LTLTPKDQS---TTSAWGGRSPWMNGSTPQGSEH-GWLSRIASGGGGSVSSPTGSTS-------SLSFSGASTTEPS-IAGEGMVVHLPPPPQSLLPVFDRELHGFDSSARE-DEQWGELPFLVVESWGGLGED-----APPEPAPLSPMLGGDEYRLFQEIASNSMHHKKPPL-------MPNGKA---GGRSNANSRATTNG-TASTXNSNK---KAPXXXXXXXXXXXXXXXXXXXXXXXXRAAPKRQQRGPKYYTARRSKPMRAPSLPSRGSDDGSYGSDHGGPSANS----------------------HRKGVSP----------------GSGFASDSA---GDLST---------------------------------------GYSSSDDVWSGTDSSRASGEDGGKGDGDAKKKRTRRDEIQKRMWGKRPSWTGALIEPAASAATAXXXXXSVPGATAREAAGAASAPRTESGLNHLIVLVHGLGGRPADMALMRSYLQTLMPGAELMVATSLQDVRKDNLGVEAMGKKLAEEVHNHVTRFCPYLGSAFVPVPTVAVPTANAGSLPLSPVTPMRPPRRGSHAPSPVVSRAS-----PGSAAAARSVSEELGXXXXXXXXXXTPSRPPRRSASGVGGASSAGG--VPQSKGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDAXXXXXXXXXXXXXXXXXXXAEMAEMLMSK--------------------SQGAIDTVIGRAGHMCFIDSAPVAWLLSLALLPFLEENVDRSSS 4920
RVIHARLNEES+ C KAW FAKSTFECGRRDLIALREEWVR TTRAWSGQCLEI QD LVRLNQTLL+PDGFLPLRA+AG+RLKRRASPT XXXXXXXXXXXXXXX XXXXXXXXXG R S+G+ARLK SGEA +PS ++TPKDQS TTS WG S W+NG+TPQ +E GWLSRIASG S +FSGASTTEPS + GM++H PPPPQSLLPVFDR+LHGFDS+AR+ D++WGELPFLV+ESWGG GE+ AP EPAPLSPM GGDEYRLFQEIASNS+H KKPP + NGKA GG AN ++ NG +AST S++ K R +P+ + P T K ++P S DGS P+A + HR P S AS S GD ST GYSSSDDVWSG DS++ G GD KK RTRRDEIQ+RMWGKRPSWTGALIEP A+A XXXXXSVP ATA E AGA+SAPRTESGLNHLIVLVHGLGGRPADMAL+RSYLQTLMPGAELMVA+SLQ VRKDNLGVEAMGK LAEEVHNHVTRFCPYL +AFVPVP PT AGS+PLSP PGSAA AR++SEEL +P+RP VPQSKGMLSFVCFSLGGLVAR+ALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDA+DPRET LYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPP+ AEMAEMLMSK SQGA+DTVIGRAGHMCFI+S+ VAWL+SLALLPFLEE DRS++
Sbjct: 10 RVIHARLNEESSACMKAWLVFAKSTFECGRRDLIALREEWVRDTTRAWSGQCLEITPQDGVDLVRLNQTLLDPDGFLPLRAKAGVRLKRRASPTRGVAGAXXXXXXXXXXXXXXXX--------XXXXXXXXXXGDRGGLSNGIARLKAMSTPSGTWSDAKVYGRSNSTASASGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPSSWSTSVTPKDQSSATTTSPWGTVSTWVNGTTPQRAEQQGWLSRIASGXXXXXXXXXXXXXXXXXXXXSFTFSGASTTEPSPVLRTGMLMHFPPPPQSLLPVFDRDLHGFDSAARDLDDRWGELPFLVLESWGGSGEEPKTDPAPQEPAPLSPMQGGDEYRLFQEIASNSLHRKKPPAAAAGSSPLVNGKATASGGVGGANDTSSANGGSASTGKSSRIQVKMASSNGYAPSDEDVSPALAKSAGAAPRPSPEYPRVPPLAPTTSADKAAVVGAIPPLVSPDGSSS-----PAAQALDDDPEVDTPPPPCYVASTPRGHRSAPKPRPVLAHSNSAPFPASSASSIASSSMWSPGDDSTAAAAGSGVAVEKTSIWDQPEKPTRHQRGPNGGAALSSTAGYSSSDDVWSGGDSNK-DGRQQEANSGDDKK-RTRRDEIQRRMWGKRPSWTGALIEPTAAAXXXXXXXXSVPRATAGEGAGASSAPRTESGLNHLIVLVHGLGGRPADMALIRSYLQTLMPGAELMVASSLQGVRKDNLGVEAMGKLLAEEVHNHVTRFCPYLENAFVPVPATGAPTPKAGSVPLSPXXXXXXXXXXXXXXXXXXXXXXXXXXXPGSAATARTISEEL------RAGMGSPTRPXXXXXXXXXXXXXXXXXXVPQSKGMLSFVCFSLGGLVARSALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDADDPRETALYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPEGDAGGSSAGHTSAVS-----AEMAEMLMSKVSESANRVVRMTLDAPRNRQSQGALDTVIGRAGHMCFIESSQVAWLVSLALLPFLEERADRSAA 1121
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: D8LJW2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW2_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.470e-94 Identity = 161/205 (78.54%), Postives = 177/205 (86.34%), Query Frame = 1
Query: 202 LDLRSRGLFCVEAVVFPVSNPSSPGVPVRTFHDASAKRSAARGVLVHPVEGDVDHRGSSGISAAGLPSYTSSMLPIRYTNEQLQLNEGCLFRVHIDADWLETDIIAIEFRLLTAPLPENEPAPTEESSPTAPPXXXPTPSKP---KEVGKVTLHTKCASSKGGLHRYHPLVFRQPHLCVLDITLHVALTSINHPGGPAGLAAAIA 807
L R +F VEAVVFPVSNP +PGVPVRTFHD SA+RS ARGVLV+P EGDVD RGSSGISAAGLPSYTSS+LPIR+TNE++QLNEGCLFRVHIDADW+ETD+IAIEFRLLT PLPEN+ APTE+ A P KP KEVGKVTLHTKCASSKGGLHRYHPLVF+QPHLCV+DITLH+ALTS+NHPGGPAGLAAAIA
Sbjct: 6 LGHRGARVFGVEAVVFPVSNPYAPGVPVRTFHDPSARRSTARGVLVNPAEGDVDQRGSSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPENDAAPTEDVIAAAGATVTPE-KKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAIA 209
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: A0A6H5K5V1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V1_9PHAE) HSP 1 Score: 229 bits (583), Expect = 2.250e-61 Identity = 142/199 (71.36%), Postives = 159/199 (79.90%), Query Frame = 1
Query: 748 VALTSINHPGGPAGLAAAIAAHAFPSEEGGAP-APRGARSPARRANSGGMATPPRSEGRRRSSSGGKGMFDARGVAGASPMRPRFITPGRSRKSAFAAKGRSSSFGGGSTLGF-TASPSRPRANSIVARPHRLPLSAAALEAASHAVGLSTALGYAPP--AMDPHRGVTARAVYRAAELLYSRHALGLRWSKGALAVAQ 1332
+ALTS+ HPGGPAGLAAAIAA+AFPSEE GAP APRG SPARRA+S ++TPPRSEGRRRS SG + M G SP+RPRFITPGR R+SAF KGRS+S G+ LG ++SP R RA S RPHRLPLSAAALEAAS AVGL+TALGYAPP A +P RG+T RAVYRAAELLYSRHALGLRWSKGAL VA+
Sbjct: 1 MALTSVTHPGGPAGLAAAIAANAFPSEEVGAPPAPRGGESPARRASSASLSTPPRSEGRRRSVSGRELMGP-----GPSPLRPRFITPGRLRRSAFVRKGRSASMSAGTALGLISSSPDRRRAKSSATRPHRLPLSAAALEAASLAVGLATALGYAPPPVATEPDRGITVRAVYRAAELLYSRHALGLRWSKGALMVAK 194
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: A0A6V1VCI1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VCI1_HETAK) HSP 1 Score: 111 bits (277), Expect = 4.460e-23 Identity = 74/204 (36.27%), Postives = 106/204 (51.96%), Query Frame = 1
Query: 4330 KGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDAXXXXXXXXXXXXXXXXXXXAEMAEMLMSK-SQGAI--------------DTVIGRAGHMCFIDSAPVAWLLSLALLPFLE 4896
+G LSFV +S+G LV RAAL A+ +L + F++L+ PHLG + KTG WA+R ++VL EL+L DAE P ET LY+LS +PGL FR + + RD +VP +SA V+ +A +MA LMS+ + GA+ +TVIGRA H+ +++S V LL L+
Sbjct: 77 RGRLSFVGYSMGSLVIRAALASRALSLFLPRLHAFLSLSSPHLGCPYSASGLIKTGMWALRTFMKVRVLEELELKDAEHPTETTLYKLSQTPGLGLFRHVALVSAHRDKYVPAYSARVQVCREAGADFVHGPAVI---------DMAANLMSEVAPGAVAHLDLDHVFEGLSVNTVIGRAAHLSYLNSPQVINLLLFTFYDMLK 271
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: A0A446SW56_TRITD (DUF676 domain-containing protein n=2 Tax=Poaceae TaxID=4479 RepID=A0A446SW56_TRITD) HSP 1 Score: 109 bits (273), Expect = 2.150e-22 Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 4312 GGVPQSKGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDA 4701
GG + K LSFV S+G ++ R AL EPA+ PYL ++ +++++ PHLG + S F +G W ++KL G Q +H+L D +DP+ T YRL S LE F+ I+ ++P+DG+VP HSA + P A
Sbjct: 81 GGCKELK--LSFVGHSIGNIIIRTALAEPALQPYLKNLFTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQDPQNTFFYRLCKSKTLENFKNIILLSSPQDGYVPYHSARIELCPAA 208
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: A0A453K8P0_AEGTS (DUF676 domain-containing protein n=5 Tax=BOP clade TaxID=359160 RepID=A0A453K8P0_AEGTS) HSP 1 Score: 110 bits (275), Expect = 6.130e-22 Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 4312 GGVPQSKGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDA 4701
GG + K LSFV S+G ++ R AL EPA+ PYL ++ +++++ PHLG + S F +G W ++KL G Q +H+L D +DP+ T YRL S LE F+ I+ ++P+DG+VP HSA + P A
Sbjct: 168 GGCKELK--LSFVGHSIGNIIIRTALAEPALQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQDPQNTFFYRLCKSKTLENFKNIILLSSPQDGYVPYHSARIELCPAA 295
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: A0A804P7S0_MAIZE (DUF676 domain-containing protein n=3 Tax=Zea mays TaxID=4577 RepID=A0A804P7S0_MAIZE) HSP 1 Score: 104 bits (259), Expect = 5.910e-21 Identity = 51/130 (39.23%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 4312 GGVPQSKGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDA 4701
GG + K LSFV S+G ++ R+AL EPA+ PYL ++ +++++ PHLG + S F +G W ++KL Q +H+L D +DP T Y+L LE F+ I+ ++P+DG+VP HSA + P A
Sbjct: 39 GGCKELK--LSFVGHSIGNIIIRSALAEPALQPYLKNLYTYMSISGPHLGHWYSSNSLFNSGLWLLKKLKNAQCIHQLTFSDDQDPHNTYFYKLCKLKTLENFKNIILLSSPQDGYVPYHSARMELCPAA 166
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: A0A453K8G7_AEGTS (DUF676 domain-containing protein n=7 Tax=Triticeae TaxID=147389 RepID=A0A453K8G7_AEGTS) HSP 1 Score: 110 bits (275), Expect = 8.280e-21 Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 4312 GGVPQSKGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDA 4701
GG + K LSFV S+G ++ R AL EPA+ PYL ++ +++++ PHLG + S F +G W ++KL G Q +H+L D +DP+ T YRL S LE F+ I+ ++P+DG+VP HSA + P A
Sbjct: 453 GGCKELK--LSFVGHSIGNIIIRTALAEPALQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQDPQNTFFYRLCKSKTLENFKNIILLSSPQDGYVPYHSARIELCPAA 580
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Match: M8BSC6_AEGTA (DUF676 domain-containing protein n=6 Tax=Aegilops tauschii TaxID=37682 RepID=M8BSC6_AEGTA) HSP 1 Score: 110 bits (275), Expect = 1.310e-20 Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 4312 GGVPQSKGMLSFVCFSLGGLVARAALLEPAMVPYLTSMQCFVTLACPHLGQTSTPLSFFKTGAWAVRKLTGLQVLHELDLDDAEDPRETVLYRLSLSPGLERFRTIVFAANPRDGFVPLHSASVRTPPDA 4701
GG + K LSFV S+G ++ R AL EPA+ PYL ++ +++++ PHLG + S F +G W ++KL G Q +H+L D +DP+ T YRL S LE F+ I+ ++P+DG+VP HSA + P A
Sbjct: 632 GGCKELK--LSFVGHSIGNIIIRTALAEPALQPYLKNLYTYMSISGPHLGYWYSSNSLFNSGLWLLKKLKGAQCIHQLTFSDDQDPQNTFFYRLCKSKTLENFKNIILLSSPQDGYVPYHSARIELCPAA 759 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig88.16348.1 >prot_C-linearis_contig88.16348.1 ID=prot_C-linearis_contig88.16348.1|Name=mRNA_C-linearis_contig88.16348.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1599bp MSCDGGGARAMVEVLLHFHGFKNLDLRSRGLFCVEAVVFPVSNPSSPGVPback to top mRNA from alignment at C-linearis_contig88:328422..341297+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig88.16348.1 ID=mRNA_C-linearis_contig88.16348.1|Name=mRNA_C-linearis_contig88.16348.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12876bp|location=Sequence derived from alignment at C-linearis_contig88:328422..341297+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig88:328422..341297+ >mRNA_C-linearis_contig88.16348.1 ID=mRNA_C-linearis_contig88.16348.1|Name=mRNA_C-linearis_contig88.16348.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=9594bp|location=Sequence derived from alignment at C-linearis_contig88:328422..341297+ (Chordaria linearis ClinC8C monoicous)back to top |