mRNA_C-linearis_contig88.16343.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 309 bits (792), Expect = 8.610e-93 Identity = 276/506 (54.55%), Postives = 332/506 (65.61%), Query Frame = 2
Query: 116 DRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRGQQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXX----SFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSAT-SCDEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAM-TEAETSTTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWEGEEGEDELRKEGDQRIRHMLARAPADRSWRRRGWLVLARSCPAKVQLVQDIDVRGSTS---DNSAKIAKASDGSGDSGRDETA------DLARLLGRVVGLDADGLFRLVVGFL 1588
DR+RL GFEIEIFKL++ AT QW+EWLRAPLEHAAA+GN+DLFTRL+DAGAN AGWRGCHGRTLLGAAA + EKM+R+LL AGA D++V+FG + +SALHVAA RGA+ T L++AGADPNV D PXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX S G SR + +++AA GHA V++ L+ SS + ++ G+ ALH A D+GD +RVLL AGA+++ T +T LH+A ++ S GT AC+ V LLL WGADEKL N+DG+T D++G E + +DE R+ +QRI MLARAPADRSWRRRGWLVL+RSCP +V + S S NSAK+A+ S G G S DE DL L+GR+VGL+A+GLFRLVVGFL
Sbjct: 10 DRSRLVGFEIEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVNVLFGGESESALHVAAARGADDTCRALMIAGADPNVRDRVGRSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANCGLRSMCTNG--SRCSPLEIAAGRGHADVLKALLDKRSSEVDTANDLGWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVNRWMTSTGTI-CALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQNDLDDEEREADNQRIHRMLARAPADRSWRRRGWLVLSRSCPTRVHIANGSSSSSSISRINGNSAKVARVS-GQGSSRDDEETEDQMMVDLRDLVGRLVGLEAEGLFRLVVGFL 511
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 285 bits (728), Expect = 6.830e-84 Identity = 214/514 (41.63%), Postives = 273/514 (53.11%), Query Frame = 2
Query: 95 MSASKRG--DRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRGQQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSATSC-DEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAM-TEAETSTTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWEGEEGEDELRKEGDQRIRHMLARAPADRSWRRRGWLVLARSCPAKVQLVQDIDVRGST-------SDNSAKIAKASDGSGDSGRDETAD-----LARLLGRVVGLDADGLFRLVVGFL 1588
M SKR DR+RLDGFEIEIFKLVQ ATS QW+EWLRAP EHAAA+GN+D FTRL+DAGAN AGWRGC+GRTLLGAAA + EKMVR+ L AGA D++V+FG + ++ L++ GADPNV D K P AKT Q XXXXXXXXXXX + Q ++ +R SR + +++AA G A VV+ L+ S D G+ ALH A G D GD +RVLL AGA++ A T+ T+L++A ++R S+GT R ACS S V LLL WGAD+KLT + G+T ++ + ++ +DE + +QRIR MLAR PA RSWRRRGWLVL+RSCP +VQ+ + NSAK+AK S S +ETAD L L+GR++ L+ADG+FRLVVGFL
Sbjct: 1 MPGSKREEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGEREA----------------LMIDGADPNVRDRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKT--ASQXXXXXXXXXXXXALCISELLLGANSHLEAVQ------------------ELLAAGANYSLRTNGSR-SPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHV-ACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQDDLDDEELEADNQRIRRMLARDPAARSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXNGNSAKVAKVSGESSSRDDEETADDMMVDLRDLVGRLIALEADGVFRLVVGFL 476
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 283 bits (725), Expect = 1.160e-82 Identity = 270/505 (53.47%), Postives = 316/505 (62.57%), Query Frame = 2
Query: 116 DRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRGQQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSATSCDEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAMTEAE--TSTTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWEGEEGEDELRKEGD-QRIRHMLARAPADRSWRRRGWLVLARSCPAKVQLVQD------IDVRGSTSDNSAKIAKASDGSGDSGRDET-----ADLARLLGRVVGLDADGLFRLVVGFL 1588
DRTR+DGFE+EIFKLVQ ATS QW+EWLRAPLEHAAA GN+ LFTRL+DAGA+ AGWRGC GRTLLGAAA +K +K++R+LL AGAK D++V+FGAK +SALH+AA RGAE+ L++AGA+PN L G XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX V L + S + D G+TALH A D+GD +RVLL AGA++ A T + LH+A R S GT R AC+ S V AV LLL WGADEKLT+D T DM+G G+ G D E D QRI MLARAPADRSWRRR WLVL+RSCP +V++ + + S++ NS K+A+ S G ET DL L+ R+VGL+ADGLFRLVVGFL
Sbjct: 12 DRTRVDGFEVEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVNVLFGAKRESALHLAAARGAEEASKALMIAGANPN-LRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTIVKAFLDTDTSLVNATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPSTGTIRALLEGGADVNVRDIEDRTPLHE-ACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGT-SGDVGSDHGDIEADGQRIHQMLARAPADRSWRRRSWLVLSRSCPTRVKIANENRSGSSVGSSSSSNGNSTKLARFSGEDSGGGERETEDQMMVDLRGLVTRLVGLEADGLFRLVVGFL 513
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 269 bits (688), Expect = 9.130e-78 Identity = 265/507 (52.27%), Postives = 317/507 (62.52%), Query Frame = 2
Query: 104 SKRGD-RTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGA-NGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRGQQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSATSCDEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAMTEAETS--TTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWEGEEGEDELRKEGDQRIRHMLARAPADRSWRRRGWLVLARSCPAKVQLVQDIDVRGSTSDNSAKIAKASDGSG-DSGRDE-------TADLARLLGRVVGLDADGLFRLVVGFL 1588
SKR D R+RLDGFEIEIFKLVQE TS QW++WL+ PLEHAAA GN+DLFTRL+DAG G GWRGC+GRTLLGAAA K +K+VR+LL AGA D++V+FG + KSALHVAA RGAE+ L++AGADPN+ D +G XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX + D+ G+TA+H + G LD G V+R+LLEAG ++A T + T LH A +R S TT AC +S V AV LLL WGADE +ND+G+ D++G ++ + DE K +RIR MLARAPADRSWRRRGWLVL+RSCP +VQ+ +GS + ++ AK + SG D G DE T D L+G ++GL+ADGLFRLVVGFL
Sbjct: 6 SKREDGRSRLDGFEIEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVNVLFGPEGKSALHVAAARGAEEASKALMVAGADPNLFD--CKGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVDTGDDQGYTAIHCAVNRHGP-LDNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVERRIASIDTT-LALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDRGDVNDEDVKADHKRIRRMLARAPADRSWRRRGWLVLSRSCPTRVQIAN----KGSRVNRNSCPAKVARVSGEDLGGDEEEAENQMTVDWGGLVGSLLGLEADGLFRLVVGFL 504
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 256 bits (653), Expect = 6.060e-68 Identity = 221/525 (42.10%), Postives = 282/525 (53.71%), Query Frame = 2
Query: 104 SKRGDRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAA-------------------RRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRGQQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSATSCDEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAMTEAETS--TTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWEGEEGEDELRKEGDQR-IRHMLARAPADRSWRRRGWLVLARSCPAKVQLVQDIDVRGSTSDNSAKIAKASDGSGDSGRDET------ADLARLLGRVVGLDADGLFRLVVGFL*G 1594
SKR DR+ LDGFE+EI +LV+E ATS QWR+WLR PLEHAAA GN+DLFTRL+DAG++G GWRGC+GRTLLGA A+ + EKMVR+LL AG D +V F A+ KSALHVAA RG ++ LLL GA + + P XXXXXXXXXXXXXXXXX G T D G+S ++ A GHA +V+ ++ G + D+ +T LHR AD G V+ VLLEAGA+++A T+ + T LH+A +R S T R XXXXXXXXXXX AC+ S V+LLL WGAD +N +G D++ + E+G D+ E D + +R MLARAPAD+SWRR GWLVL+RS P +VQ + + GS++ S K+A+ S DS RD+ D LL R+VGL+ADGLFRL+VGFL G
Sbjct: 6 SKREDRSHLDGFEVEIVELVREGATSEQWRQWLRIPLEHAAAKGNLDLFTRLMDAGSSGEPGWRGCNGRTLLGATAYGESEKMVRALLEAGVTYDRNVRFSAEGKSALHVAAARDPNLPACKGYHALHVAAERGHDRVISLLLLKGAHVDAKTYSGDAPLXXXXXXXXXXXXXXXXXLG---------GAHTDVAERHPTNSSGRWKCFWLPVPTGGRPDNGGWS----------------------------------SLPNAVCCGHATIVKAFLETGIDVDTTDDQAYTVLHRAADMDGC------VVHVLLEAGADVNAKTDQNSFLYTPLHLAVDRRVSSIRTIRAXXXXXXXXXXXSEDNDTPLHV-ACTYSNAAVVKLLLCWGADGTCSNGNGHVPADVI-RAHDEDGLDDEHIEADHKHVRRMLARAPADKSWRRHGWLVLSRSGPTRVQ-IGNRGGSGSSNSCSTKLARVS--GKDSSRDDELENQMMVDWRVLLDRLVGLEADGLFRLMVGFLCG 476
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 218 bits (554), Expect = 6.380e-58 Identity = 224/503 (44.53%), Postives = 268/503 (53.28%), Query Frame = 2
Query: 128 LDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRA-GAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRGQQTXXXXXXXXXXXXXXXXXXXXXX--DKDSRD-FQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSATSCDEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAMTEAETSTTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWE---------GEEGEDELRKEGDQRIRHMLARAPADRSWRRRGWLVLARSCPAKVQLVQDIDVRGSTSDNSAKIAKASD-GSGDSGRDETAD-----LARLLGRVVGLDADGLFRLVV 1579
LDG E+EIFKLV+E ATS QWREWLRAPLEHAAA+GN+DLFTRL+DAGA+GSAGWRGCHGRTLLGAAA+ K E++V LL GA D++V FG + +SALHVAA R + LL+AGADPN+LD P KT XXXXXXXXXXXX D D D F+ XXXXXXXXXXXXXXXXXXXXXX A + DE TALH A + L+ T LH R S T XXXXXXXXX AC S AV LLL WGAD+ + + +GET D +G W+ G +D+L+ +G QR R +LA AP DR WRRRGWLVL RS P KVQ+++D S+ ++AK A+ S+ SG+ G DE D L RL+G +VGL AD +FR+VV
Sbjct: 65 LDGLEVEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVNVCFGDRLESALHVAAGRDDQHLSRVLLIAGADPNLLDDVGRSPLHVAAEKGHHRVLGFLLRKGRADANKTTXXXXXXXXXXXXXXXXXTSCVSKLLLYGADTDCGDRFENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWN-DEDWATALHCAAQGSRPLLEXXXXXXXXXXXXXXXXXXXXECVWTPLHRGVYSRLSSLDTXXXXXXXXXXXNAQAENTWTPLHY-ACYKSNAAAVDLLLRWGADDTIVDGEGETAADEVGTWDPEVHSNEDDGSIDDDKLKADG-QRTRLILACAPVDRLWRRRGWLVLCRSYPTKVQILKDSS-SSSSGCSTAKAARVSEEDSGECG-DEDGDEARIELGRLVGHIVGLQADVVFRMVV 562
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.740e-52 Identity = 188/513 (36.65%), Postives = 244/513 (47.56%), Query Frame = 2
Query: 95 MSASKRG--DRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRGQQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSATSCDEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAMT-EAETSTTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWEGEEGEDELRKEGDQRIRHMLARAPADRSWRRRGWLVLARSCPAKVQLVQDIDVRGST----------SDNSAKIAKASDGSGDSGRDETA------DLARLLGRVVGLDADGLFRLV 1576
MSASKR DR+R+DGF+IEIFKLVQ ATS QW+EWLRAPLEHAAA L T A+G W EKMVR+LL AGA D +V+FG + +SALHV RGAE + L++AGADP + D + A R + + R ++++DMAA GHA V+ L+ + F A+ G D GD +R LL GA+++A T ++ ++ LH+A +R S+G XXXXXXXXXXXXX AC +S V V LLL WGADEKLTN G+T D++ + + +D+ R+ DQRI M+A PADRSWRRRGWLVL+RSCP +VQ+ + N+AK+A+ S G S DE DL L+GR+VGL+ADGL RLV
Sbjct: 1 MSASKREEEDRSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKELGSLHT------ADGH--WS----------------EKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDSCRALMIAGADPTLRDRGDDTRWFKEMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADVHAKTASQSTPLHLAASEGRALCLSELLLGANNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDNI--------FFAM----SVDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVDRRIASDGMIXXXXXXXXXXXXXXGDDNKPLHL-ACRHSSVHGVELLLRWGADEKLTNSVGKTPADVIRALQQGDLDDKEREADDQRIGRMVALVPADRSWRRRGWLVLSRSCPTRVQIANGSSXXXXXXXXXXXXXRINGNAAKVARVS-GESSSRDDERTEGDMIVDLRNLVGRLVGLEADGLLRLV 475
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 182 bits (461), Expect = 1.080e-49 Identity = 92/139 (66.19%), Postives = 110/139 (79.14%), Query Frame = 2
Query: 95 MSASKR-GDRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAA-HNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLD 505
M A KR G R+RLDGFEIEIFKLV+E A QW++W RAPLEHA A GN+DLFTRL+DAGA+G AGWRGCHGRTLLGAAA N +KMVR+LL AGA+ D++V FG +S LHV+A RGAE + L++AGADPN+ D
Sbjct: 1 MYAPKRKGHRSRLDGFEIEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVNVRFGNTNESTLHVSAARGAEASCTALMIAGADPNLRD 139
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 186 bits (473), Expect = 3.590e-49 Identity = 142/311 (45.66%), Postives = 181/311 (58.20%), Query Frame = 2
Query: 95 MSASKRGDRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGCHGRTLLGAAAHNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRRG---QQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGSSATSC-DEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDA 1015
MS SKR DR+R+DGFE++IFKLVQ T QW++WL APL HAAA G +DLFTRLI+AGA+GSAGWRGCHGRTLLG AA + G +MVR+ L AGA D++V FGA +SAL VAA RGAE + L++AGADPN +D D A +T D D+ F XXXXXXXXXXXXXXXXXXXXXX ++ D+AA+ GHA +++ ++ G++ + D+ G+TALH A +D G RVLLEAGA+++A
Sbjct: 1 MSGSKREDRSRVDGFEMKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVNVRFGAISQSALQVAAARGAEGSCSALMIAGADPNWIDYDDTVQLPSLLHLAGAAGHHRVVRVILQYGAYVDPKAIVNETPLHCAASKGHTSCVFELLMGGADMDAVAFLEGXXXXXXXXXXXXXXXXXXXXXXXXDRCHPNLDGFSPSDIAAKRGHATILKPFLETGTNVDAATDQYGWTALHSAACVDEPVIDDGAAARVLLEAGADVNA 311
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI) HSP 1 Score: 186 bits (473), Expect = 2.360e-48 Identity = 193/406 (47.54%), Postives = 232/406 (57.14%), Query Frame = 2
Query: 95 MSASKRG-DRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDLFTRLIDAGANGSAGWRGC--HGRTLLGAAA-HNKGEKMVRSLLRAGAKPDLDVMFGAKPKSALHVAARRGAEKTFGTLLLAGADPNVLDGDKEGPXXXXXXXXXXXXXXXXXXXXXXXXAKTRR-GQQTXXXXXXXXXXXXXXXXXXXXXXDKDSRDFQGYSXXXXXXXXXXXXXXXXXXXXXXSFEVRGVYSRYAAIDMAAEHGHAAVVRVLVQNGS-SATSCDEAGFTALHRTADSTGAHLDRGDVIRVLLEAGANIDAMTEAETS----TTLHVAASQRYGSNGTTRXXXXXXXXXXXXXXXXXXXXXXXACSNSCVGAVRLLLSWGADEKLTNDDGETMEDMLGQWEGEE 1282
MSAS+R DR+R+DGFEIEIFKLV+E ATS QW++WLR PLEHAAA GN+DLFTRLIDAGA G GW+G RTLLGAAA NK + MV++LL AG ++ FGA +SALHV RGAE L++AGADPN+ + D + P A +TXXXXXXXXXXX DKD D +G XXXXXXXXXXXXXXXXXXXXXX G+AA+++ + S + D G+TALH A + D GD +R LLEAGA+++ T+A S T LHVA ++R S XXXXXXXXXXXXXX AC V V LLL WGADE L N +T D +G W E+
Sbjct: 1 MSASEREEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAKGNLDLFTRLIDAGAGGEPGWQGWGHRERTLLGAAACGNKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMAGADPNLGNVDGDSPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKG-EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVNRRMASICMIXXXXXXXXXXXXXXXCNQTPLHV-ACMWGNVSGVELLLRWGADEMLKNHRADTPADEIGVWGDED 404 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig88.16343.1 >prot_C-linearis_contig88.16343.1 ID=prot_C-linearis_contig88.16343.1|Name=mRNA_C-linearis_contig88.16343.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=499bp MSASKRGDRTRLDGFEIEIFKLVQEHATSGQWREWLRAPLEHAAADGNMDback to top mRNA from alignment at C-linearis_contig88:196439..199323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig88.16343.1 ID=mRNA_C-linearis_contig88.16343.1|Name=mRNA_C-linearis_contig88.16343.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2885bp|location=Sequence derived from alignment at C-linearis_contig88:196439..199323+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig88:196439..199323+ >mRNA_C-linearis_contig88.16343.1 ID=mRNA_C-linearis_contig88.16343.1|Name=mRNA_C-linearis_contig88.16343.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2994bp|location=Sequence derived from alignment at C-linearis_contig88:196439..199323+ (Chordaria linearis ClinC8C monoicous)back to top |