mRNA_C-linearis_contig88.16340.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: D8LKN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN1_ECTSI) HSP 1 Score: 679 bits (1752), Expect = 3.710e-227 Identity = 380/564 (67.38%), Postives = 423/564 (75.00%), Query Frame = 2
Query: 395 EGALVSLWASVLGSAVSLVWSGSVLGLVHKLNIVAFVLLVGVWATLQFRSIYREDPDVARLLERLLFACLPLPAAAILTWAAVAFGGAAALAAPCLALVLYATVALYAVPLRSGLGGGGAGGVHGDSSRVAPVLLACMLFLPALVQISIDRRLLVWAGAAARWESLQKVALAAALPWPLLQSLRTKGVLWWAAPQLRRRLDKALWAGGLAGFLVLCETSKPLLLLPLFRPFLFSAPQPPLDSLLVSAALLSPVAAWFVQGIGGRRGTYTARALTVASASRCLGLLLGVDQSVMPLFDLSALALSMLVFSGRRDLRAYVVGVAGVSSLILWFSWQTVWHLSFTFALPFGPRQPSG--QDLSPSALMSLSLQQVSTCCALLSFGVLMVPGMVAFGARQMGMGVIFGLHAVTLLLLEMALVGAEAKDPWQLSELYPLPLVAVTGVLGAWMAVRLVRDRGVDPLFVCLSLAVRDFDLLLLVSGGVVDLTCVAESPELSYLATAVPLVSLAMAATAPFALFRRPXXXXXXXXXXXXXXXYAAVETRVGTGGPVGVGAAGDWSGPMLPAE 2080
EGALVS+W +VL SA +L+W+GS LGLVHK N++A LLVGVWATLQF +IYR+ PD ARLLERLLFAC PLPAAAILTWA VAFGGA AAPC+AL +YA V LYAVPLRSGLGGGGAGG IS+D RLLVWAG A RW+SLQKVALAA+LPWP+L SLR+KGVLWWA P L RRLDK L GG LVLCETSK L+LLP+FRPFLFSAP+PPLDSLL SA L AAWF QG G+RG Y ARALTVAS RCLGLLLGV+Q+VMPLFDLSA ALSMLVFSGRRDL+AYVVGVAGVSS ILWFSWQTVWHLSF+FALP GPR G SP SLSLQQVS CCA LSFGVL+VPGMVAFG RQ+ +GV+FGLHAV L+LLE+ LVGAEA+DPWQL LYPLPLVA+TGVLG WMA RLVRD GVDPLF+ + ++ +L +V ESPE+SYL T VP+VSLAMAA APFALFRR AAV TR+G+G PVG G A DWSGPM+P E
Sbjct: 26 EGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACTLLVGVWATLQFGTIYRDGPDAARLLERLLFACFPLPAAAILTWAGVAFGGAT-YAAPCVALFMYAAVGLYAVPLRSGLGGGGAGG------------------------ISVDYRLLVWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWATPGLGRRLDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSLLASAVLACLAAAWFAQGRAGQRGVYAARALTVASV-RCLGLLLGVEQAVMPLFDLSAFALSMLVFSGRRDLKAYVVGVAGVSSFILWFSWQTVWHLSFSFALPLGPRHWEGGATSSSPPLSSSLSLQQVSACCAALSFGVLLVPGMVAFGVRQVAIGVVFGLHAVVLMLLEIVLVGAEARDPWQLDGLYPLPLVALTGVLGIWMAFRLVRDHGVDPLFLWVPGSIGAAKMLAYFLAVLVPTD--GESPEMSYLFTVVPIVSLAMAAAAPFALFRR------------TPPTQAAVGTRLGSGEPVGSGIAEDWSGPMVPLE 549
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: A0A6H5KTV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV5_9PHAE) HSP 1 Score: 486 bits (1252), Expect = 8.030e-154 Identity = 329/576 (57.12%), Postives = 377/576 (65.45%), Query Frame = 2
Query: 2102 MASALWISSRPVVYPLLEGLLGGGGAPSNFVTPSGDGSRVHALGFCGIFLAVYVLTMVSKHFPESRTARRSGAALLVASMALLVFRPTAVTEFAFNDGGGRDTPWREYVKQVCGIVIAGAGVLTLTGLATPTKTLARRAAFAVTVGAPVGVWSALASMPGADSFAVSCSAAGAAGTYSCALMVLLESTVPRPA-VLSQ---SSRSSGSGGPVGRTRGGGGRAAGGRRTSVLGELYVAMVVWMPLAAVAQ-----------GLRLLLAGPAGRRLLGLRVAAGA---ASGADSPSAQGAARFALATAATGHAIIALALKLLEERGAGXXXXXXXXXXXXXXXGGWV---------ASMFRAIGEGHRIPSMGNASAVIASMGTLLCCWRHLPGESARALAAAPSCALLLLLQEDGRVFDGVAGSGFATAVPVGALSAAWAGSAVYYILLKGALAPGASRPWFLFGIPLPLPALFDGLFGQALRVHRGTARHHFHGVFGATESRRHGEAAVALQAVSFWTADSPWQPLWNLLLLLASVPSHAYLVRFLWGGQGSPLQRAWEVRAALAMNVLPLVAGDL 3748
MASAL+I SRPV+ PLL LL GG + S D S H+L FCG+ LA+Y L +VS+HFP+SR A CG+ +AG GVLTLTGLA+PTKTLARRAAFAV V PVGVWSALASMPGAD+ VS SA GAAGTYSCALMVLLE+ +PRPA VLS+ SR+ G G VGR R R SV+ ELYVA+V +MP A +AQ GL+LL+ GP GR L+GL G SG + +AQGAARFALATAATGHA+IA+ALKLLEER G XXXXXXXXXXXXXX AS+ RA GE IPSMGNASA+ +++G CCWRHLPGESARAL A P CALLLLLQEDGR+F G +GF AVP GALSA WAGSAV+YI+LKG+ GA R F L +L G AL V+RG HHFHG +G+ +SRRHGEAAVAL+AVSFWTADSPWQPLWNL LL SVPSHA+L RFLWGG+GS QRA EV AALA+N LPL+A DL
Sbjct: 1 MASALYICSRPVISPLLRELLSGGSHVVSASASSVD-SPAHSLAFCGVILALYALAVVSRHFPDSRMA--------------------------------------------CGVAVAGVGVLTLTGLASPTKTLARRAAFAVAVAVPVGVWSALASMPGADAAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRAR---------RVGSVVIELYVAVVAFMPAAGIAQASQGAGWKEIKGLQLLILGPVGRNLMGLAPPTGHNNDGSGGGT-NAQGAARFALATAATGHAVIAVALKLLEERTGGAXXXXXXXXXXXXXXXXXFGRRRGVQGPASISRAFGEARWIPSMGNASAIFSAVGAFFCCWRHLPGESARALTAIPCCALLLLLQEDGRLFRG--DTGFGAAVPAGALSATWAGSAVFYIILKGSSLAGAPRSSF------SLMSLLGA--GPALGVYRGVL-HHFHGAYGSVDSRRHGEAAVALRAVSFWTADSPWQPLWNLALLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADL 510
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: D8LKN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN3_ECTSI) HSP 1 Score: 313 bits (801), Expect = 4.130e-94 Identity = 163/239 (68.20%), Postives = 182/239 (76.15%), Query Frame = 2
Query: 3128 MGNASAVIASMGTLLCCWRHLPGESARALAAAPSCALLLLLQEDGRVFDGVAGSGFATAVPVGALSAAWAGSAVYYILLKGALAPGASRPWFLFGIPLPLPALFDGLFGQALRVHRGTARHHFHGVFGATESRRHGEAAVALQAVSFWTADSPWQPLWNLLLLLASVPSHAYLVRFLWGGQGSPLQRAWEVRAALAMNVLPLVAGDLTSINFMGLAGLAGGCLQLWLVRERQVTGRRFI 3844
MGNASA+ +++G CCWRHLPGESARALAA P CALLLLLQEDGR+ G +GF AVP GALSA WAGSA +YILLKG+ GA R F + L GL AL V+RG HHFHG +GA +SRRHGEAAVAL+AVSFWTADSPWQPLWNL LL SVPSHA+L RFLWGG+GS QRA EV AALA+N LPL+A DLTSIN MGL GLAGG +QLWL+RERQ TGRR I
Sbjct: 1 MGNASAIFSAVGAFFCCWRHLPGESARALAAIPCCALLLLLQEDGRILRG--DTGFGAAVPAGALSATWAGSAAFYILLKGSSLAGAPRSSFSL-----MSLLGGGLLRPALGVYRGVL-HHFHGAYGAADSRRHGEAAVALRAVSFWTADSPWQPLWNLALLAVSVPSHAFLARFLWGGRGSTPQRASEVLAALAINALPLIAADLTSINLMGLTGLAGGLVQLWLLRERQATGRRII 231
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: A0A6H5KUT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUT8_9PHAE) HSP 1 Score: 311 bits (797), Expect = 1.200e-93 Identity = 167/249 (67.07%), Postives = 185/249 (74.30%), Query Frame = 2
Query: 857 VWAGAAARWESLQKVALAAALPWPLLQSLRTKGVLWWAAPQLRRRLDKALWAGGLAGFLVLCETSKPLLLLPLFRPFLFSAPQPPLDSLLVSAALLSPVAAWFVQGIGGRRGTYTARALTVASASRCLGLLLGVDQSVMPLFDLSALALSMLVFSGRRDLRAYVVGVAGVSSLILWFSWQTVWHLSFTFALPFGPRQ-PSGQDLSPSALMSLSLQQVSTCCALLSFGVLMVPGMVAFGARQMGMGVIFG 1600
+WAG A RW+SLQKVALAA+LPWP+L SLR+KGVLWWA P LRRR+DK L GG LVLCETSK L+LLP+FRPFLFSAP+PPLDS+L SA L AAW CLGLLLGV+Q+VMPLFDLSA ALSMLVFS RRDL+AYVVGVAGVSS LWFSWQTVWHLSF+FALP GPR G SP SLSLQQVS CCA L FGVL+VPGMVAFG RQ+ +GV+FG
Sbjct: 1 MWAGGAVRWKSLQKVALAASLPWPMLLSLRSKGVLWWARPGLRRRMDKILSVGGAVSLLVLCETSKSLVLLPVFRPFLFSAPRPPLDSILASAVLACLAAAW------------------------CLGLLLGVEQAVMPLFDLSAFALSMLVFSDRRDLKAYVVGVAGVSSFTLWFSWQTVWHLSFSFALPLGPRHWEGGATSSPPLSSSLSLQQVSACCAALCFGVLLVPGMVAFGVRQVAIGVVFG 225
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: D8LKN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKN2_ECTSI) HSP 1 Score: 273 bits (697), Expect = 5.490e-78 Identity = 177/320 (55.31%), Postives = 212/320 (66.25%), Query Frame = 2
Query: 2102 MASALWISSRPVVYPLLEGLLGGGGAPSNFVTPSGDGSRVHALGFCGIFLAVYVLTMVSKHFPESRTARRSGAALLVASMALLVFRPTAVTEFAFNDGGGRDTPW---REYVKQVCGIVIAGAGVLTLTGLATPTKTLARRAAFAVTVGAPVGVWSALASMPGADSFAVSCSAAGAAGTYSCALMVLLESTVPRPA-VLSQ---SSRSSGSGGPVGRTRGGGGRAAGGRRTSVLGELYVAMVVWMPLAAVAQGLRLLLAGPAGRRLLGLRVAAGAASGADSPSAQGAARFALAT-----AATGHAIIALALKLLEERGAG 3025
MASAL+I SRPV+ PLL LL GG ++ D S H+L FCG+ LA+Y L +VS+HFP+SR ARRSGAALLV SMALLV +P+A++ + GG W REYV+Q CG+ +AG GVLTLTGL +PTKTLAR+AAFAV VG PVG+WSALASMPGA + VS SA GAAGTYSCALMVLLE+ +PRPA VLS+ SR+ G G VGR R R SV+ ELYVA+V +MP A +AQGL+LL+ GP GR L+GL G G AATGHA+I +ALKLLEER G
Sbjct: 1 MASALYICSRPVISPLLRELLSGGRHVASASASLVD-SPAHSLAFCGVVLALYALAVVSRHFPDSRVARRSGAALLVTSMALLVLQPSALSGVVEGEHGGVGRSWKSRREYVEQACGVAVAGVGVLTLTGLTSPTKTLARKAAFAVAVGVPVGIWSALASMPGAAAAIVSWSALGAAGTYSCALMVLLEAALPRPAAVLSRRGSGSRAGGGGPAVGRAR---------RVGSVVVELYVAVVAFMPAAGIAQGLQLLILGPVGRNLMGLAPPTGHNDGGXXXXXXXXXXXXXXXXXXXXAATGHAVITVALKLLEERTGG 310
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: A0A6H5L8K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8K5_9PHAE) HSP 1 Score: 169 bits (428), Expect = 1.460e-44 Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 2
Query: 248 SATFVHNLRLWALGGPCIAVLLLLGGRATALVAAFGVMACYCFDLADNAEGALVSLWASVLGSAVSLVWSGSVLGLVHKLNIVAFVLLVGVWATLQFRSIYREDPDVARLLER 586
S F+HNLR+WA GGPC+ VLLLLGGR T+L AFGVMACYCFDLADNA GALVS+W +VL SA +L+W+GS LGLVHK N++A VLLVGVWATLQF +IYR+ PD ARLLER
Sbjct: 56 SPKFLHNLRVWAFGGPCVGVLLLLGGRPTSLGVAFGVMACYCFDLADNAGGALVSVWGAVLWSAGTLLWAGSTLGLVHKANVLACVLLVGVWATLQFGTIYRDGPDAARLLER 168
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: A0A7S0W061_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W061_9CRYP) HSP 1 Score: 119 bits (298), Expect = 7.400e-24 Identity = 141/519 (27.17%), Postives = 228/519 (43.93%), Query Frame = 2
Query: 257 FVHNLRLWALGGPCIAVLLLLGGRATALVAAFGVMACYCFDLADNAEGALVSLWASVLGSAVSL------VWSGSVLGLVHKLNIVAFVLLVGVWATLQFRSIYREDPDVARLLERLLFACLPLPAAAILTWAAVAFGGAAALAAPCLALVLYATVALYAVPLRSGLGGGGAGGVHGDSSRVAPVL----------------LACMLFLPALVQISIDRRLLVWAGAAARWESLQKVALAAALPWPLLQSLRTKGVLWWAAPQLRR-RLDKALWAGGLAGFLVLCETSKPLLLLPLFRPFLFSAPQPPLDSLLVSAAL--LSPVAAWFVQGIGGRRGTYTARALTVASASRCLGLLLGVDQSVMPLFDLS---ALALSMLVFSGRRDLRAYVVGVAGVSSLILWFSWQTVWHLSFTFALPFGPRQPSGQDLSPSALMSLSLQQVSTCCALLSFGVLMVPGMVAFGARQMGMGVIFGLHAVTLLLLEMALVGAEAKDPWQLSELYPLPLVAVTGVLGAWM 1729
F HN R+ PC+ +L+ GG+ T G M Y D EG L+++W +V+ S +L +++ S+ + N++AF G+W TLQF + RE+P + ERLLFA +P ++TWA VA GA A LA L A LY +P+RS G S +V P C + LPAL++ ++ + + + L V L ALP ++ +L +G LWW +L+ R+ + A G A L + + ++ FR ++ P P D + V+A + L+ + G+ RG + LT A+ LG+ + + MP + L A A + F +R L YV + +I WF ++ L F F D P ++ + L ++ A L ++PG+VA R +G + LHA + +LE+ L Q +YP LVA+T ++G ++
Sbjct: 59 FQHNARIACFMLPCMGILMAYGGKTTTSTVVAGAMVTYMLDFYGWREGTLIAVWVTVVSSMATLFLASMHLFTVSIYNIALVYNMLAFCASAGLWGTLQFTQLQRENPRTVLICERLLFALMPATPPVLMTWATVAMAGAGACHYYLLAY-LSAGFYLYVLPVRSSF----RVVARGRSKKVGPAADELDELIMGRFESTAHAMCFVILPALIKTAVHHGHMY-----STRDDLADVVLTHALPPLVIVALADRGSLWWMGIELKYYRVFRT--ACGAALVLAVAGAIEIRVVFHAFRQYI-RVPYP-YDYVAVTAGVYGLALMVLAHFSGVLESRGMWVP--LTALGATAALGVQMALG---MPFYMLPFGCAGAYFCVQFYYKRKLWDYVSFCGTAALVICWFIAKSFMFLDFEF------------DPLPMSIRHVCLVLMAVVLASL-----LLPGLVATSRRPGLVGGLLALHAAGMCVLELQL-------HCQFKGIYPPYLVALTTLVGLFL 534
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: A0A453JK02_AEGTS (Uncharacterized protein n=3 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453JK02_AEGTS) HSP 1 Score: 116 bits (290), Expect = 2.340e-22 Identity = 145/552 (26.27%), Postives = 242/552 (43.84%), Query Frame = 2
Query: 257 FVHNLRLWALGGPCIAVLLLLGGRATALVAAFGVMACYCFDLADNAEGALVSLWASVLGSAVSLVWSGSVLGLVHK---LNIVAFVL------LVGVWATLQFRSIYREDPDVARLLERLLFACLPLPAAAILTWAAVAFGGAAALAAPCLALVLYATVALYAVPLRSGLGGGGAGGVHGDSSRVAPVLLAC-----MLFLPALVQISIDRRLLVWAGAAARWESLQKVALAAALPWPLLQSLRTKGVLWWAAPQLRRRLDKALWAGGLAGFLVLCETSKPLLLLPLFRPFLFSAPQPPLDSLLVSAALLSP---VAAWFVQGIGGRRGTYTARALTVASASRCLGLLLGVDQSVMPLFDLSALALSMLVFSGRRDLRAYVVGVAGVSSLILWFSWQTVWHLSFTFALPFGPRQPSGQDLSPSALMSLSLQQVSTCCALLSFGVLMVPGMVAFGARQMGMGVIFGLHAVTLLLLEMALVGAEAKDPWQLSE--LYPLPLVAVTGVLGAWMAVRLVRDR--GVDPLFVCLSLAVRDFDLLLLVSGGVVDLTCV 1849
F HN R+ P A LL LGG V A G+ A Y D +GA ++WA++L + V+ +S S+ L ++A +L L+GVWA+LQFR I E+P + LERLLFAC+P+ A+A+ TWA V+ G A A+ LA L++VP S DS + L +C +LF+P L + + L A W ++ + L +P+ L T+G LWW R +D+ A GL +++ + ++ F ++ + P PL+ LLV+ +L +AA +G + L V S +++G +PL +S ++ F ++ L +Y V S ++LWF W L+ A P + + + + +M++++ ++ A L F L+ G++ HA+ L +E L A + + +YP +V +T G + RL D+ G ++ L +L + S VV ++ V
Sbjct: 129 FAHNARIAVALAPAAAFLLDLGGAPVLAVLAVGLAAAYALDALRLRQGAFFTVWAALLAADVAFFFSASLSSAAAASLPLTVLALLLCAETSFLIGVWASLQFRWIQLENPTIVAALERLLFACVPIAASAVFTWAVVSAVGMAN-ASYYLATFAMVFYWLFSVPRSSSFKNRKQDAPLQDSDGILGPLESCVHALYLLFVPVLFHAASNHTTLF-----ASWANVCDLLLLFFVPFLFLLYASTRGSLWWITRDTRT-MDQIRMANGLVALVIVVLCLEVRVVFHAFGRYIHAPP--PLNYLLVTVTMLGGALGLAAHAAGKVGDAVSSVAFMGLAVL-VSGAGAVVIGFPLVFLPLPMMSGYYVAR--FFTKKSLSSYFTFVGISSLMVLWFVVHNYWDLNIWVAGM--PLKSFTKYIVAAVIMAMAVPGLALLPAKLRF--LVELGLIG--------------HALLLCYIENRLFNYAAMYYFGFEDDIIYPSYMVLITTFFGLALVRRLSVDQRVGSKAAWILTCLYSSKLSMLFITSRSVVWVSAV 650
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: B8BKU7_ORYSI (Uncharacterized protein n=13 Tax=Oryzeae TaxID=147380 RepID=B8BKU7_ORYSI) HSP 1 Score: 115 bits (289), Expect = 3.390e-22 Identity = 139/524 (26.53%), Postives = 229/524 (43.70%), Query Frame = 2
Query: 257 FVHNLRLWALGGPCIAVLLLLGGRATALVAAFGVMACYCFDLADNAEGALVSLWASVLGSAVSLVWSGSVLGLVHK---LNIVAFVL------LVGVWATLQFRSIYREDPDVARLLERLLFACLPLPAAAILTWAAVAFGGAAALAAPCLALVLYATVALYAVPLRSGLGGGGAGGVHGDSSRVAPVLLAC-----MLFLPALVQISIDRRLLVWAGAAARWESLQKVALAAALPWPLLQSLRTKGVLWWAAPQLRRRLDKALWAGGLAGFLVLCETSKPLLLLPLFRPFLFSAPQPPLDSLLVSAALLSP---VAAWFVQGIGGRRGT--YTARALTVASASRCLGLLLGVDQSVMPLFDLSALALSMLVFSGRRDLRAYVVGVAGVSSLILWFSWQTVWHLSFTFALPFGPRQPSGQDLSPSALMSLSLQQVSTCCALLSFGVLMVPGMVAFGARQMGMGVIFGLHAVTLLLLEMALVGAEAKDPWQLSE--LYPLPLVAVTGVLGAWMAVRLVRDRGVDP 1765
F HN R+ A P A LL LGG V A G+ A Y D +GA ++WA+++ + V+ +S S+ L ++A +L L+GVWA+LQFR I E+P + LERLLFAC+P+ A AI TWA V+ G A A+ LA L+++P S D+ + L +C +LF+P L + L A W ++ + L +P+ T+G LWW R +D+ A GL +V+ + ++ F ++ + P PL+ LLV+ +L +AA +G + +T A+ V+ A +++G +PL +S + F ++ L +Y VA S ++LWF W L+ A P + + + + +M++++ ++ L F +V G HA+ + +E L + + +YP +V T LG + RL D+ V P
Sbjct: 85 FAHNARVAAALAPAAAFLLDLGGLPVFAVLAVGLAAAYLLDALRQRQGAFFTVWAALIAADVAFFFSASLSSAASASVPLTVLALLLCAETSFLIGVWASLQFRWIQLENPTIVAALERLLFACVPIAAPAIFTWAVVSAVGMAN-ASYYLATFSMVFYWLFSIPRPSSFKNRKQDAPWQDTDGILGPLESCVHALYLLFVPVLFHAASHHATLF-----ASWANVCDLLLLFFIPFLFQLYASTRGALWWITRDART-MDQIRMANGLVALVVVVLCLEVRVVFHSFERYIHAPP--PLNYLLVTVTMLGGALGMAAHAAGKVGDAVSSVAFTGLAVLVSGAG---AIVIGFPIMFLPLPMISGYYAAR--FFTKKSLSSYFTFVAIASMMVLWFVVHNYWDLNIWIAGM--PLKSFTKYVVAAVIMAMTVPGLALLPTKLRF-------LVELGLTG---------HALLICYIENRLFNYATMYYFGFEDDVMYPSYMVLFTTFLGLALVRRLSVDQRVGP 576
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Match: A0A0E0BJN8_9ORYZ (Uncharacterized protein n=1 Tax=Oryza glumipatula TaxID=40148 RepID=A0A0E0BJN8_9ORYZ) HSP 1 Score: 115 bits (287), Expect = 3.430e-22 Identity = 118/409 (28.85%), Postives = 188/409 (45.97%), Query Frame = 2
Query: 257 FVHNLRLWALGGPCIAVLLLLGGRATALVAAFGVMACYCFDLADNAEGALVSLWASVLGSAVSLVWSGSVLGLVHK---LNIVAFVL------LVGVWATLQFRSIYREDPDVARLLERLLFACLPLPAAAILTWAAVAFGGAAALAAPCLALVLYATVALYAVPLRSGLGGGGAGGVHGDSSRVAPVLLAC-----MLFLPALVQISIDRRLLVWAGAAARWESLQKVALAAALPWPLLQSLRTKGVLWWAAPQLRRRLDKALWAGGLAGFLVLCETSKPLLLLPLFRPFLFSAPQPPLDSLLVSAALLSP---VAAWFVQGIGGRRGT--YTARALTVASASRCLGLLLGVDQSVMPLFDLSALALSMLVFSGRRDLRAYVVGVAGVSSLILWFSWQTVWHLSFTFA 1426
F HN R+ A P A LL LGG V A G+ A Y D +GA ++WA+++ + V+ +S S+ L ++A +L L+GVWA+LQFR I E+P + LERLLFAC+P+ A AI TWA V+ G A A+ LA L+++P S D+ + L +C +LF+P L + L A W ++ + L +P+ T+G LWW +R +D+ A GL +V+ + ++ F ++ + P PL+ LLV+ +L +AA +G + +T A+ V+ A +++G +PL +S + F ++ L +Y VA S ++LWF W L+ A
Sbjct: 153 FAHNARVAAALAPAAAFLLDLGGLPVFAVLAVGLAAAYLLDALRQRQGAFFTVWAALIAADVAFFFSASLSSAASASVPLTVLALLLCAETSFLIGVWASLQFRWIQLENPTIVAALERLLFACVPIAAPAIFTWAVVSAVGMAN-ASYYLATFSMVFYWLFSIPRPSSFKNRKQDAPWQDTDGILGPLESCVHALYLLFVPVLFHAASHHATLF-----ASWANVCDLLLLFFIPFLFQLYASTRGALWWITRDVRT-MDQIRMANGLVALVVVVLCLEVRVVFHSFGRYIHAPP--PLNYLLVTVTMLGGALGMAAHAAGKVGDAVSSVAFTGLAVLVSGAG---AIVIGFPVMFLPLPMISGYYAAR--FFTKKSLSSYFTFVAIASMMVLWFVVHNYWDLNIWIA 547 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig88.16340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig88.16340.1 >prot_C-linearis_contig88.16340.1 ID=prot_C-linearis_contig88.16340.1|Name=mRNA_C-linearis_contig88.16340.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1269bp MEFPPVRRRANVRPSTADIGLRSRANAARRVDTDTGAGGPALQDALSGSAback to top mRNA from alignment at C-linearis_contig88:159015..174772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig88.16340.1 ID=mRNA_C-linearis_contig88.16340.1|Name=mRNA_C-linearis_contig88.16340.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15758bp|location=Sequence derived from alignment at C-linearis_contig88:159015..174772+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig88:159015..174772+ >mRNA_C-linearis_contig88.16340.1 ID=mRNA_C-linearis_contig88.16340.1|Name=mRNA_C-linearis_contig88.16340.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7614bp|location=Sequence derived from alignment at C-linearis_contig88:159015..174772+ (Chordaria linearis ClinC8C monoicous)back to top |