mRNA_C-linearis_contig87.16324.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig87.16324.1
Unique NamemRNA_C-linearis_contig87.16324.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: A0A6H5JZ81_9PHAE (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ81_9PHAE)

HSP 1 Score: 556 bits (1434), Expect = 4.680e-191
Identity = 305/407 (74.94%), Postives = 326/407 (80.10%), Query Frame = 1 
Query:    4 MAMLRKVALRSAGALGLASVGAAYVYRPDPWSNPPRDPLSERAGHGLEEGNLLMRASRVFTFVAGTAAFSFLMHVLNTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLRKLALPSPXXXXXXXXXXXXSATGADARGRREGTEASPSSSTAESSRGGDTTAAAVIPGGREGDVLWKSTREERQLYSRIARRVEEALLRLEAEARRDLGDRYPGLPAEAAAMLEAK 1224
            MA LRKVA+ SAGALGLA+VG A+VYRP+PWSNPP DPLSERAG   EE + LM+ SR+FTFV GTAAFS LMHVLNTFELKED+HY KFL LV+ RP GVPLLTV NHCSP+DDPGVLVGMLP+ VTVRP LMRWTICAQEICFKWT+AG GFGSAK  VMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQ GSLGGRAAG GR+E GRLKWG  KMIAHAPVTPVVIPLFHTGMA LVPINP TRKIL A+P  G+TVTAR G  I FDDL+EDHERRHG LRKLALP  XXXXXXXXXXXX                                      GG EGDVLW+STREERQLYSRIARRVEEALL+LEAEARRDLG RYPG PAE+AA+L A+
Sbjct:    1 MAALRKVAVGSAGALGLATVGTAFVYRPNPWSNPPSDPLSERAGQ--EEESFLMKTSRLFTFVTGTAAFSILMHVLNTFELKEDEHYRKFLSLVEERPSGVPLLTVCNHCSPVDDPGVLVGMLPARVTVRPELMRWTICAQEICFKWTAAGTGFGSAK--VMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQGGSLGGRAAGAGRDEHGRLKWGVGKMIAHAPVTPVVIPLFHTGMANLVPINPLTRKILHALPRMGHTVTARAGRAITFDDLLEDHERRHGRLRKLALPPEXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------XXXGGGEGDVLWRSTREERQLYSRIARRVEEALLQLEAEARRDLGQRYPGYPAESAALLAAE 382
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: D7G278_ECTSI (Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G278_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 1.140e-75
Identity = 144/328 (43.90%), Postives = 186/328 (56.71%), Query Frame = 1 
Query:  229 LNTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLRKLALPSPXXXXXXXXXXXXSATGADARGRREGTEASPSSSTAESSRGGDTTAAAVIPGGREGDVLWKS-TREERQLYSRIARRVEEALLRLEAEARRDLGDRYPGLPAEAAA 1209
            LN   L +D+ + + + LV+ RP G PLLTV+NH S LDDP V+  +LP  + VRP LMRW++C+QEICF+  +    FG+ K  V+PI RG G+DQ+LLLNF R+L  GGWCHIFPEG   Q G++GGR+      +LGRLKWG  +MIAHAP TP V+P FHTGM  LV  +P T+ +L   P   N +T RVG  I  +DL+  HE  HGPL K +                                                 AAV  GG + +  W S +  ++QLYS I RRVE AL  LEAEAR +LGD YP +P+  A+
Sbjct:   15 LNNTRLVKDERHARLVDLVRDRPEGEPLLTVANHASTLDDPAVMAVLLPWDIVVRPRLMRWSVCSQEICFETRAIASFFGAGK--VLPIERGGGVDQKLLLNFSRKLAAGGWCHIFPEGKTVQTGTIGGRSPPAS-SDLGRLKWGVGRMIAHAPRTPRVVPFFHTGMQNLVAEDPATKDVLPRQPQFLNDITVRVGDAIEVEDLLAQHEDEHGPLWKYS-------------------------------------------------AAVAQGGADDERKWASCSAADKQLYSAITRRVEAALHALEAEARLELGDAYPTIPSVVAS 290
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: A0A835ZCU4_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCU4_9STRA)

HSP 1 Score: 237 bits (604), Expect = 3.590e-67
Identity = 132/267 (49.44%), Postives = 165/267 (61.80%), Query Frame = 1 
Query:   79 YRPDPWSNPPRDPLSERAGHGLEEGNLLMRASRVFTFVAGTAAFSFLMHVLNTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVT-VRPGLMRWTICAQEICFKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLR 876
            YRP P+S+PP+D L+ERA H +E   LLM  +R   F+ GT     L+ V NT  + +D+HY  FL  V+ R  G PL+TVSNH  PLDDP +L  ++P  +  ++P LMR+TIC+Q+ICF        FG+AK  VMPIARG GIDQRLL N  RRL  G WCHIFPEG C Q GSL GR  G GR+ LGRLKWG  K+IAHAP  PVV PLFHTGM  + P++P +RK    V    + +T    G + +          HG  R
Sbjct:   85 YRPTPYSDPPKDALAERA-HEVEP--LLMALTRRLLFLVGTVGCKALLQVANTCRITKDEHYAAFLRAVEARGNGTPLITVSNHACPLDDPCMLAALMPFRLAALKPELMRFTICSQDICFNNGVLESFFGAAK--VMPIARGEGIDQRLLQNMQRRLASGAWCHIFPEGSCFQTGSLSGRT-GEGRQRLGRLKWGVGKLIAHAPCPPVVFPLFHTGMQGVTPLHPNSRKYFSLV----SALTPLADGPVSWGSAAPAGADPHGTPR 341
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: A0A835ZF50_9STRA (Tafazzin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF50_9STRA)

HSP 1 Score: 227 bits (579), Expect = 5.480e-65
Identity = 136/321 (42.37%), Postives = 171/321 (53.27%), Query Frame = 1 
Query:  232 NTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLRKLALPSPXXXXXXXXXXXXSATGADARGRREGTEASPSSSTAESSRGGDTTAAAVIPGGREGDVLWKSTREERQLYSRIARRVEEALLRLEAEARRDLGDRYPGLP 1194
            N  ++K+D+ Y   +  +K RP G PLLTV NH S LDDP +     P SV + P  MRWTIC+QEICF   +    FGS K  V+PI RG GIDQ  LL F RR+  G WCHIFPEG   Q G +GGR  G    E+G LKWG  K+IAHAPV P ++P++HTGM  +VP +P TR +L   PGTG+ +T RVG  I  DDLIE +E+ +GPL K                                                T + A  P        W+S+ +E  LY+ I RRV+ AL  LEAEAR +LG  +P  P
Sbjct:   18 NDMKIKDDERYKHLIRCIKYRPEGKPLLTVGNHNSTLDDPALFGAFAPWSVDLTPRQMRWTICSQEICFMNAAF---FGSGK--VLPIERGGGIDQVQLLKFARRMAAGTWCHIFPEGRTVQLGHMGGRM-GKNEAEIGTLKWGVGKLIAHAPVRPEIVPIYHTGMQNVVPEHPVTRDVLSPKPGTGHEITFRVGHPIVVDDLIEQYEKANGPLWKY-----------------------------------------------TPSVAKDPP----RFSWRSSSKELALYAAITRRVQTALEALEAEARAELGPNFPERP 281
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: L1K3X0_GUITC (Tafazzin family protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3X0_GUITC)

HSP 1 Score: 196 bits (498), Expect = 1.790e-53
Identity = 117/329 (35.56%), Postives = 167/329 (50.76%), Query Frame = 1 
Query:  196 GTAAFSFLMHVLNTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLG----GRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLRKLALPSPXXXXXXXXXXXXSATGADARGRREGTEASPSSSTAESSRGGDTTAAAVIPGGREGDVLWKSTREERQLYSRIARRVEEALLRLEAEARRDL 1170
            G     FLM  LN+ ++ ED  ++ +L  ++ RP G+PL+TV+NH S  DDPG++  + P  V + P  MRW +C QEICF      I       + +PI RG G+DQ LL +  R L  G W H+FPE    Q  ++G     R       E+GRLKWG  K+IAH+PVTP++IPL+H GMA ++P      ++L   P  G  V  R G EI+ DDLI +HE  +GPL K+                         G ++G                      +I      +  W+ST++E+ LYS I RR+E ALL+LE +++  L
Sbjct:    4 GKLVSEFLMRRLNSLQVVEDSRHEAWLARIRSRPAGIPLITVANHESCCDDPGLMGALTPWDVAIDPIRMRWGLCTQEICFPKGKHLIHTFIGCGQALPIRRGGGVDQPLLFDVARELAAGRWVHVFPEARVVQSCTIGLDPLTRRTADELREMGRLKWGVGKLIAHSPVTPIIIPLYHKGMAGVMPQK---NRLLSVFPRGGGYVVVRFGEEIKVDDLISEHESLYGPLPKVTT----------------------EGLQDG----------------------II------NCRWESTQQEKLLYSAITRRIEHALLKLEEDSKEAL 279
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: A0A7S2NY36_9STRA (Tafazzin family protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NY36_9STRA)

HSP 1 Score: 196 bits (497), Expect = 4.160e-52
Identity = 124/325 (38.15%), Postives = 166/325 (51.08%), Query Frame = 1 
Query:  211 SFLMHV----LNTFELKEDKHYDKFLGLVKGRPRGV----PLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAAGL-GREE---LGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLRKLALPSPXXXXXXXXXXXXSATGADARGRREGTEASPSSSTAESSRGGDTTAAAVIPGGREGDVLWKSTREERQLYSRIARRVEEALLRLE 1149
            +F++HV     NTF L +D HYD  +  ++           ++TVSNH S +DDP +   +LP  + +RP  +RWT+C+QEICFK  +    FG+ K  V+PI R  GIDQ LLL F R++ GG W H+FPEG   Q G+LG    G   REE   +GRLKWG  K+IAH+P   + +P ++TGM  +VP    T +I+   P  GN V  RVGG I F+DLI +HE  HGPL+K                                                        G   G  +WKST EE+ LYSRI +R+E+ LL LE
Sbjct:  113 NFVIHVGMNYYNTFTLLKDDHYDFLIQTIRQETNNPGSNKAVITVSNHNSTIDDPVLFGLLLPWDLKLRPMKIRWTLCSQEICFKNPAIAAMFGAGK--VLPIRRQGGIDQPLLLEFARKIAGGDWVHVFPEGKTNQGGTLGANYFGTRSREEAANIGRLKWGVGKLIAHSPKEVICVPFYNTGMEGVVPQKE-TGEIVYVYPMGGNHVQIRVGGRIYFEDLIAEHESIHGPLKKYTT-------------------------------------------------TPTNGSGNGIHMWKSTEEEKLLYSRITKRIEDQLLDLE 385
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: A0A7S3HNV6_9STRA (Tafazzin family protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNV6_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.580e-49
Identity = 105/238 (44.12%), Postives = 142/238 (59.66%), Query Frame = 1 
Query:  169 ASRVFTFVAGTAAFSFLMHVLNTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEIC-FKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLRK 879
            AS +   V   A  +FL   L   ++KED++YD FL  V  R +G PLLTVSNH S  DDP ++ G+LP  + V+P   R  IC+QE C        +   +   RV+PI RG+GI+Q+LLL+F R +  G WCH+FPEG   Q  +LGGR  G   +ELG+LKWG  K+IAHAPVTP V+P +  G   + P +   + +   +P  G+ V  R G EIRFDD I +HE+ +G L K
Sbjct:   38 ASSIVLLVTTAAVRTFLF-CLGDCKIKEDENYDNFLKKVTDREKGTPLLTVSNHRSLFDDPAIMSGILPLQLAVQPRYNRNAICSQEYCCVSKLPTPMHVYTGLGRVLPIKRGAGINQKLLLDFARLVAAGEWCHVFPEGGIWQWDTLGGRRNGH-EKELGKLKWGIGKLIAHAPVTPEVVPFYFKGTETIYPQDE-NKVVKNKLPIPGHKVNIRFGEEIRFDDFIAEHEKIYGALWK 272
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: A0A6U3TIN0_9STRA (Tafazzin family protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TIN0_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.800e-48
Identity = 126/312 (40.38%), Postives = 162/312 (51.92%), Query Frame = 1 
Query:   31 RSAGALGLASVGAAYVYRPDP-----WSNPPRDPLSERAGHGL-----EEGNLLMRASRVFTFVAGTAAFSFLMHVLNTFELKEDKHYDKFLGLVKG----RPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKA-RVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAAGLGREEL-----------GRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPI----NPFTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLR 876
            R A    +AS  AA  YRP P      + P R   S  + H +     +E   L+  +R  T    T A   LM+   ++E++ D++Y KFL +V G      +   LLTV+NH S  DDPGV+  +LP  V ++P   RW IC+QE CF      +  G   A +V+PI RG+G++Q+LLL+F R L  G WCHIFPEG   Q+G LGGR       E            G+LKWG  K+IAHA V P VIP  H GM  L+PI    N  T K      G    V  + G EI FDDLIE+HE  HG LR
Sbjct:   18 RVAAGTVIASFTAAAYYRPVPDNSTDGNGPDRTSESFCSSHQIFPYLRDETPFLLSIARSLTLGVTTLAIRVLMNTYGSYEIENDENYAKFLEIVLGGDGRSDQKQGLLTVANHRSLFDDPGVISCVLPLWVGLQPKYQRWGICSQEYCFNDAVPSLAKGYIGAGQVLPICRGAGVNQKLLLDFARLLADGEWCHIFPEGGVWQEGQLGGRRTAAQETETSSTSALVVPPAGKLKWGTGKLIAHANVRPRVIPFAHVGMENLLPIDYERNTTTLK-KDLFGGEPLRVYIKFGKEIFFDDLIEEHEEEHGKLR 328
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: A0A7S4NET4_GUITH (Tafazzin family protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NET4_GUITH)

HSP 1 Score: 174 bits (442), Expect = 1.870e-44
Identity = 118/355 (33.24%), Postives = 166/355 (46.76%), Query Frame = 1 
Query:  160 LMRASRVFTFVAGTAAFSFLMHVLNTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLG----GRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPIN------PFTRKILRAVP---GTGNTVTARVGGEIRFDDLIEDHERRHGPLRKLALPSPXXXXXXXXXXXXSATGADARGRREGTEASPSSSTAESSRGGDTTAAAVIPGGREGDVLWKSTREERQLYSRIARRVEEALLRLEAEARRDLGDRYP 1185
            L+ A  +  F+   + F F++ V NT E+ +D++Y   +  ++ R  GV LLT SNH S LDDPG+L  ++P  V + P  MRW++  QEI F        F  A  +V+PI RG GIDQ L  +  R++  G W H+FPE    Q G LG     + +    +E G LKWG  K+IAH P  PV +P +H GM  ++P +       +   ++   P   G GN V   VG    FDDLIE+HE++HGPL K+   +P                                                     E    WKS   ++ LY  I RRVE+ L  LEA +  DL D++P
Sbjct:   72 LLVARGIIQFLV-VSIFKFIVGVRNTVEVVKDENYSYLMQQMRSRQEGVSLLTASNHASSLDDPGLLSCLIPMDVAMSPKRMRWSLATQEIAFPNIPLVQAFMGA-GQVLPIWRGGGIDQPLFFDVCRQIAAGRWIHLFPEARVVQSGILGIDPVTKRSEAELKEKGLLKWGIGKLIAHLPKRPVFVPFYHVGMTAVLPQHNRWEKGTYNNLVISWDPRHYGRGNKVKVWVGESCSFDDLIEEHEKKHGPLWKIPTEAPQEKW------------------------------------------------EETMKQWKSREVDKPLYHHITRRVEKCLKNLEARSLADL-DKHP 375
[Close]
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Match: K0TQ94_THAOC (Tafazzin family protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQ94_THAOC)

HSP 1 Score: 174 bits (440), Expect = 5.050e-44
Identity = 113/298 (37.92%), Postives = 147/298 (49.33%), Query Frame = 1 
Query:  121 SERAGHGLEEGNLLMRASRVFTFVAGTAAFSFLMHVLNTFELKEDKHYDKFLGLVKGRPRGVPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSAGIGFGSAKA-RVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDGSLGGRAA--------------------------------GLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINPFTRK-------ILRAVPG-----TGNTVTARVGGEIRFDDLIEDHERRHGPLRK 879
            SE +    E   +L+  SR  +    T A    M+   ++ + +DKHY  FL +V G  R   L+TVSNH S  DDPGV+  +LP  V V P   RW IC+QE CF     GI  G   A +V+PI RG+G+DQ+LL +F R L  G W HIFPEG   Q   LGGR                                   L     G+LKWG +K+IAH+P+TP VIP  H GM +L+P +  T K       +   +P       G  V+ + G  I FDDLI +HER+HG L K
Sbjct:   72 SEPSPWSREHVPVLLEWSRRISIGLTTLAIRLFMNTYGSYSIHDDKHYRHFLEVVLGDRRSQGLVTVSNHRSLFDDPGVVSCLLPLHVAVVPKYNRWGICSQEYCFNQALPGIVKGYIGAGQVLPICRGAGVDQKLLFDFARHLATGEWVHIFPEGGVWQWDELGGRRQYPPGAVSSIDFSGNNGETSAAQVIKSATSQQRALPLSSKGKLKWGVAKLIAHSPITPEVIPFAHHGMEKLLPQDEKTGKTKLRKNMLWSCLPQWLGGEEGLRVSVKFGATITFDDLINEHERQHGELWK 369
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig87.16324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ81_9PHAE4.680e-19174.94Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G278_ECTSI1.140e-7543.90Tafazzin family protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZCU4_9STRA3.590e-6749.44Tafazzin family protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZF50_9STRA5.480e-6542.37Tafazzin family protein n=1 Tax=Tribonema minus Ta... [more]
L1K3X0_GUITC1.790e-5335.56Tafazzin family protein n=1 Tax=Guillardia theta (... [more]
A0A7S2NY36_9STRA4.160e-5238.15Tafazzin family protein n=1 Tax=Leptocylindrus dan... [more]
A0A7S3HNV6_9STRA2.580e-4944.12Tafazzin family protein n=2 Tax=Spumella elongata ... [more]
A0A6U3TIN0_9STRA2.800e-4840.38Tafazzin family protein n=1 Tax=Ditylum brightwell... [more]
A0A7S4NET4_GUITH1.870e-4433.24Tafazzin family protein n=1 Tax=Guillardia theta T... [more]
K0TQ94_THAOC5.050e-4437.92Tafazzin family protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig87contigC-linearis_contig87:769971..777396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score568.9
Seed ortholog evalue1.9e-159
Seed eggNOG ortholog2880.D7FH08
KEGG rclassRC00004,RC00037
KEGG koko:K13511
KEGG ReactionR09037
KEGG Pathwayko00564,map00564
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.cardiolipin acyl-chain remodeling
EggNOG OGsKOG2847@1,KOG2847@2759
Ec32 ortholog descriptionAcyltransferase, putative
Ec32 orthologEc-26_003030.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01004
Exons6
Model size2251
Cds size1275
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig87.16324.1prot_C-linearis_contig87.16324.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig87 770944..777393 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930675.433841-UTR-C-linearis_contig87:769970..7709431622930675.433841-UTR-C-linearis_contig87:769970..770943Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 769971..770943 -
1690881190.5586183-UTR-C-linearis_contig87:769970..7709431690881190.5586183-UTR-C-linearis_contig87:769970..770943Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 769971..770943 -
1622930675.5460777-UTR-C-linearis_contig87:777393..7773961622930675.5460777-UTR-C-linearis_contig87:777393..777396Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 777394..777396 -
1690881190.6373696-UTR-C-linearis_contig87:777393..7773961690881190.6373696-UTR-C-linearis_contig87:777393..777396Chordaria linearis ClinC8C monoicousUTRC-linearis_contig87 777394..777396 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930675.450949-CDS-C-linearis_contig87:770943..7713941622930675.450949-CDS-C-linearis_contig87:770943..771394Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 770944..771394 -
1690881190.5696084-CDS-C-linearis_contig87:770943..7713941690881190.5696084-CDS-C-linearis_contig87:770943..771394Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 770944..771394 -
1622930675.4664261-CDS-C-linearis_contig87:771900..7721471622930675.4664261-CDS-C-linearis_contig87:771900..772147Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 771901..772147 -
1690881190.5778427-CDS-C-linearis_contig87:771900..7721471690881190.5778427-CDS-C-linearis_contig87:771900..772147Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 771901..772147 -
1622930675.480866-CDS-C-linearis_contig87:772422..7725191622930675.480866-CDS-C-linearis_contig87:772422..772519Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 772423..772519 -
1690881190.58624-CDS-C-linearis_contig87:772422..7725191690881190.58624-CDS-C-linearis_contig87:772422..772519Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 772423..772519 -
1622930675.4978142-CDS-C-linearis_contig87:773078..7733251622930675.4978142-CDS-C-linearis_contig87:773078..773325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 773079..773325 -
1690881190.5967689-CDS-C-linearis_contig87:773078..7733251690881190.5967689-CDS-C-linearis_contig87:773078..773325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 773079..773325 -
1622930675.5108395-CDS-C-linearis_contig87:774385..7745441622930675.5108395-CDS-C-linearis_contig87:774385..774544Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 774386..774544 -
1690881190.608091-CDS-C-linearis_contig87:774385..7745441690881190.608091-CDS-C-linearis_contig87:774385..774544Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 774386..774544 -
1622930675.5260084-CDS-C-linearis_contig87:777319..7773931622930675.5260084-CDS-C-linearis_contig87:777319..777393Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 777320..777393 -
1690881190.6244712-CDS-C-linearis_contig87:777319..7773931690881190.6244712-CDS-C-linearis_contig87:777319..777393Chordaria linearis ClinC8C monoicousCDSC-linearis_contig87 777320..777393 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig87.16324.1

>prot_C-linearis_contig87.16324.1 ID=prot_C-linearis_contig87.16324.1|Name=mRNA_C-linearis_contig87.16324.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=425bp
MAMLRKVALRSAGALGLASVGAAYVYRPDPWSNPPRDPLSERAGHGLEEG
NLLMRASRVFTFVAGTAAFSFLMHVLNTFELKEDKHYDKFLGLVKGRPRG
VPLLTVSNHCSPLDDPGVLVGMLPSSVTVRPGLMRWTICAQEICFKWTSA
GIGFGSAKARVMPIARGSGIDQRLLLNFYRRLLGGGWCHIFPEGHCEQDG
SLGGRAAGLGREELGRLKWGASKMIAHAPVTPVVIPLFHTGMAELVPINP
FTRKILRAVPGTGNTVTARVGGEIRFDDLIEDHERRHGPLRKLALPSPPS
PPLPPPPQTSSATGADARGRREGTEASPSSSTAESSRGGDTTAAAVIPGG
REGDVLWKSTREERQLYSRIARRVEEALLRLEAEARRDLGDRYPGLPAEA
AAMLEAKAAAGGGGGGRELREERG*
back to top

mRNA from alignment at C-linearis_contig87:769971..777396-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig87.16324.1 ID=mRNA_C-linearis_contig87.16324.1|Name=mRNA_C-linearis_contig87.16324.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7426bp|location=Sequence derived from alignment at C-linearis_contig87:769971..777396- (Chordaria linearis ClinC8C monoicous)
GCCATGGCGATGCTGAGGAAGGTAGCGCTACGCAGTGCGGGAGCCTTAGG
ATTGGCTTCTGTCGGTGCAGCTTACGTGTGAGTACGCGTCTTTTTGCTTT
TGGGTGCGTTTTGTGTGGAAAGGGAGACGAGCAAGAGACCGCGCAGAACA
AACCTTGACCTCCACCGCTGATCTTCACCTTGCTTCACAGAAGCAATACT
GTATTGCTCCCAACTCGACCAGTCCAAGCACATTTTTATAGATAAAAACC
TTTGGGCGAGCAAGTCGCAGAGTTCTCTTCACCCCTCTCGTTTCCCGAGT
AGCGCAACACGCAACACGCAACACGCAACACGCGACACGCAACCCTTACT
TGTGATTTTGTCTGCCCCTCCGGCGGAAATACATACTCCGAGTACAGTAC
TCCGTCTACACTGCTGTCTGTTGTCTCAACGGTCCGGAGCAAATTGCTGT
CTCTCTCCTGGACTGGGAGACTACCAGTCTTCTTGCGTTACCCGTTGTAG
GTCTCCCTGGTCGTCTCCTCGTATCCGCCTCAACATGGTGCACTTGAAGG
AGGAGCCGGGAGCGAGGGTGGGGACACCGCTGGACCAAGTGCGGCGGGCG
GTATGGGCGATGCTGTACGCCGACGACGCCGGCGTGATGTCGAAATCCGC
CGACGGACTGGCGAGGATGATGACCGCTATCGTGGAGGTATTCCGGGAGT
TCGGGCTGACGGTATCGGAGAAGAAGACGGAGACCCTCCTGATGCGCGTG
AAGGAGAAGCAGCCACCACCACCACCGCCGCCGCCGCTGATCATCGAAGC
AGCAGGGCAGAGGTACGCGCAGACGACCGAGTTCCGGTACTTGGGTGGCT
TCGTCAACGAACACGGCGACCTCACCCGAGAGATCAACTACTACAGGAGC
AAAATAGCCTGGGCGTGCTTCAGGAGATATGCCCGGGAGCTCTTCGACAG
GCCGGGAGCACCGTTCCGGCTCTCAAGACTCGCCTACTCAAGGCGGAGGC
AATGGAGGCGCTACTGTACGGTTGCATGACGTGGTCACCGCGTTGCGAGC
ACTACCGGCTGCTGCAGACGACGCACCACCGGCTGCTCCTGCGAGTCATC
GGATACCGACGCAAGCGGGGTACCCACTGGCAGCTGTCATACGCCCAGGC
GCTGAAGCAGGTCGGCTGCCAGAGCGTGGAAGCCACTGTCCGTCAGCGGC
GGCTGCTCTTCGCGGGGGGCGTAGCAAGGCAGCCGGACGGGCGACTCCCG
AAGCGACTGATGTTCGGCGAGGTGGTGGGAGGGGAGGACCCGGGCAGGGG
AAGCCCGGAGCAGAGCTGGCTGATATGCCTGAAGGACGATTTGAAGGCGT
TCGGGGCCACGCACGGCTCCACGGCCGACGAACCGTGTGTCTTCGGGGTC
CCGAAATTAATTTGGGCGGAGGTGGCGAAGGTCAAGGGGGGAGTACCGTG
GCACGCGGGGGTGCTGCAGGGAGCCGAGAGGTTTATGACCTCTTGGCACA
AGGACGAGGAGGAGGCGAGCCGACAACGCGCCACCAAGCGAGGAGACGAC
GGGCCCAGAAATAGTTTAGACACAGCGCCAACCAACGGGACGGGAGGGGG
GCGGAAAGAAACGGCGAGGGAAGAAAGCAAGCGGGAAGAGACCGACCGGG
TGGCGCGATATGTGACGGATTGAATCTAGTGACTATTTTTTCCTTTTACT
TTCCCCTCCCCCCCCCTTTTTCGCTGCACCATTACACTACCCCGACGGGA
AATGATGTCGTGTTTAGATTATTTTTGCAGGTGTGACTGTCCCTCTGCGT
GTTGGATGTTTTATTTTTGTCGACATGTCTCCTTGTCTGCTTCCCTTGTA
ACATACGAAGTATATATATACTTCGAAGTATGCACCTTAGTCGGTGGAGA
GGGATCCGACTATGTATTTGCCTTGCCGGGGGAACTGGGACGGAACACCC
CGGCTTCGTAGGGGTAGCAAGATAGAATCGGGAGGTTATACCCCTGGTTG
GTGATGTTGGCGCTCCACTCTTATTTTATTTTTACTTTTGCCTCACATAG
CGTGTAGAGGGGAGCGGAGGGCTCCAGACTAATTGTTTCCTGATTCTTTT
ATTTTTCTCGTATTTTATCTCTCTGCTGACCCTTGGGGTCCGTTTTATTT
TTCAGTATACCTTTTTAGGTAAGTTAGCTTGTGACCACGGAAATTGGCCG
CGTCAAGTGATGGATTAGTACGGAGAGGTTGAGACAGAAGAAGGCGGTAC
TGGATAGAGACGAGACCGGGATGGTTTTTAATGTGAAGACAACAACAACA
ACAACAACAAGACACAGAATACACTGTACTGAACACCCACGTGAATCAAC
ACTCTCGGACCTGTTCCCCGCCGCCCCACCACGCCGCACGCCGCCCTCTC
TTGGTGCCGGGACTGCTGAGGAAAATATTTTTGGTCTCCAAACGAATGAA
CGCCACGCGAATGCGAAGAGAACTTGAACTTGCTGTCAATCGAAAGTAGT
CTACGTAGAGTGTAAAAACCAGCTGCCGTCCGTTGCTCTTCGGGATGGGT
CGTGCGAGTTGGCATTCTTGGCTACTACCGCCAAGTTAAGACAGGAATTC
CACATACATATAGCAGTAGCGAGAGCACGACAAGCTATCCTTGGGAGGAG
GCATCGTATTATTTCATTATAAGGACGCCACTACTGTAGTACATATAGCA
GCAGCGAGAGCACGACAAGCTATCCTTGGGAGGAAGCATCGTATTATTTC
GTTCTAAGGACGCCACTACTGCTGTAGAACTACCGGTGGAAGAACGCTCA
AGTTTCAAACCCCTCTCCCGTCCATTTCCTTCCCTTCCCTTCCCGCCCAA
AGATATCGGCCTGACCCATGGTCAAACCCGCCGAGGGACCCGCTGAGCGA
GCGCGCGGGACACGGGCTGGAGGAGGGTAACTTGCTGATGAGGGCATCTA
GGGTCTTCACCTTCGTCGCTGGGACCGCGGCGTTTTCCTTCCTGATGCAC
GTCCTCAACACGTGAGTTTGAGTTTTCCCAACACCCCCCCTCAGTTTCGT
GATTTTGAGTTTTCCCAGCCCCCCCCTCTCGGTTTCGTGATTTTGCGACG
CACGAACAGATGGAACAGAACCACCACCACCACCACACCATCACACCACC
ATCAGGTAGCAGCAGGCAGTGGGGATGTCGCATGCAGCATCAAGTCTTGT
GTCTTTCCCGGTGCTGTGACCGGTCTTAAAGATGAACGAGCAAGCTAGAA
TGAGGGTGGATAGTGGATGCATACCTGCTTTCCCCCTCCGAACGTATTAC
TCGAGCAAAGATTTACGCTCCGCTTCACCCCCCCCACCCTTGTAAAATTG
CATTCAAATCTTAGGTACAACTCTTAGGTAGCAGCATGGATTTTCGGCCT
TGATGACGCTCGAAGGTCGCATCATCGCGCTCCGCGCTTGTTGCTATGTT
TGCGAGCCTGGGCCGGCGAGCCCTCGTCGTGCTCCGTTCCTTAATTGAGG
CTTTGCAATGATGTCAAGTCTATACCAAAACGACTTCGCCCATGAACGAT
CAATGAGCATACACACACACACACACACACACACACACACACACACACAC
ACACACACACACGCACGCACGCACGCACGCACCACCACCCTTTTCCTGGG
GGCGTATCTGTCAGAGTACACAGATGCCTCTATTCGTACTTTGCTGCGAA
ACCACTCCTGTTGTTGCTCTCTTCGGATTAATCTGCGACAGCGTCCCACC
CGGCCCTCTGATCTAGCTTGTAGCATGTGCATGTTGATCATGACCGCCCA
GACGCTGTCGTGAGGTCGTGCTACCCAGAAAAAGATGTTGGGCGGCCTGC
TCTGCGTCGACCTCCATGTGCTGTCGACCAAAATCAACGGTCCTACTAGC
CGGTGAAGGCGAGCAAGCAGCGTGTGCGCTCCCTCCTCCGCCCCCTCCCC
CGTTCTCCCATCAACCCTAACCCCTTTCCATCTCATCTCTCTTATCCCCC
TCCCCCCCATCTCCCAAAACAAACGGGATACAAAACGCGCGGCGGAAACA
ACCATCAAAACGAAAACACAGGTTTGAGTTGAAAGAAGACAAGCACTACG
ACAAGTTCCTCGGTCTGGTCAAGGGCCGCCCACGGGGGGTGCCCCTCCTG
ACGGTGTCCAACCACTGCTCCCCGCTCGATGACCCGGGCGTACTGGTGGG
CATGCTGCCCTCGAGCGTCACGGTGAGGCCGGGGCTGATGCGCTGGACCA
TCTGCGCGCAGGAGATCTGCTTCAAGTGGACCTCGGCCGGGATCGGGTTC
GGCTCCGCAAAGGCGCGTGTCTTCGTGTGTGCGTTTGTGTATTGTCGTAG
AGGGAGAGAAGAAAAAGAGAGACAGAGAATCGCGTGTTATTTATTAATGT
AATTATGGTTCGATGCTCGTGTGCGTGTTTGTTGCACAACGGAGAGAGTG
CTCGTGATTTGGGCGCTTTGTCTAGTGGCTGTCGTGTCGTGTCGTGCGTA
GTGTCAGGAGAGGATTAGGCAGCCATGGCGCTACTGCTGTAGTTTATTGT
CCTCGCCTGGGTGTGTTTGGCGCTATGCAGCGCGGCGCGTGTGGGTACGT
GCATATGAAAGAGTTGTGCATGCTGCGCAAGAGCGGGGATTGTGCTGTGT
CTTGATCTTCCCGTTAGTTTTTGTTCGACGTTGATCTCCAGAAGCGTGAT
GCTCGTTTACGGGCCGACCGTGGCCACCCTACTTCACTGCTGTGGCCGCT
GCTTGGTGCCGTTTGGTACAGCAGTAGAGCGACGAGAGCAGAGAACGAGC
TAGGGATCGATTTCGTGAGATCCTTGTCAACCCCATTATTCACCAGGGTT
TTTAAGTTCCTGCGTTTTGTTTCGTAGGTGATGCCCATCGCGAGAGGGAG
CGGAATCGACCAGCGGTTGCTGCTCAACTTCTACCGCCGATTGCTGGGGG
GAGGATGGTGTCACATTTTTCCAGGTGCGCGCGTTTTTTTTTGACGAAAA
CCAATCACACAACAGCTACAACGACTAGCAACAGCAACAGCCAAAACGTG
CCACACATAAACGAGCGGCAGGAACGGCCCCAGCAGCAACGAACCAAACC
CAAGCGGCCGCTGTTCTCCCGTGCCCCTCGTCGCCCCTCTTGCGTTTCTC
TTTCTCTCTCTCGTGCGCGTGTTGTTTCCTTCTCGTTTCGCCTGTTGCTG
CGAAAACAAATACTAAAATACTTCGCAATAAAATAAAAACGAAAAAAAGA
GGGCCACTGCGAGCAGGACGGCTCCCTCGGCGGCCGCGCGGCGGGCCTCG
GGCGCGAGGAGCTCGGCCGCCTCAAGTGGGGCGCCAGCAAGATGATCGCG
CACGCCCCCGTCACCCCCGTTGTCATCCCGCTGTTCCACACCGGCATGGC
CGAGCTCGTCCCCATCAACCCCTTCACGCGCAAGATCCTGCGCGCGGTGC
CCGGAACGGGGAACACGGTCACCGCACGCGTGGGTGGCGAGATCAGGTTG
GTTTGGTGTTTGTTTGCTTTCTCCTTTTTGCACGCAGGTGTGTGTGTGTG
TGTGGTGTGTGTGTGGTGTGTCTGTGCGTGTGTGTGTGTGTGCGTGTGTG
TTCCCCTCGCGTATTGTATACTTTGTATATGTGTACGTGCATATTTTCGT
CCCATCAATAGCCTAGCCTGCCTTGTCCTCGGTGCACACTACACGCCGCA
GTGTAGGTACACATACCCGTGTCAGTGCACTGTCTCTACAACTAGAACCA
TCCGGGGTCACACAGGAGGGGGTACCCACGCCGGGGTTTTTTTCCTATTT
TTATTTTTATTTTGTAAGTATTGTTTTGTTCATCTTTCTGCGAGGTGTAA
GCCGTGGCCATATGGTTTGTGAAGCCCTCCCTTCATATGAAGGTTAAGGT
TCGGTCTATCTCGAACTGCTGCCGCTTAGTCGATTGCATCGCTTTACTCA
ATACCGCAGACAAAGCGATCCGCCACACTTGTGTTGAAACGTGAAAAAAC
AGGTTCGACGACTTGATCGAGGACCACGAGAGACGGCACGGCCCGCTCCG
AAAGCTAGCCCTGCCGAGCCCACCGTCACCACCACTACCACCACCACCAC
AAACCTCTTCTGCGACTGGGGCGGACGCGAGAGGGCGGAGAGAAGGCACG
GAGGCATCGCCGTCATCATCTACCGCTGAATCATCAAGAGGAGGAGACAC
AACAGCAGCGGCCGTGATCCCCGGGGGCAGGGAAGGAGATGTCCTCTGGA
AGTCTACCCGCGAGGAGCGGCAGTTGTACAGCAGGATCGCCCGGAGAGTG
GAGGAAGCGCTGCTCCGGCTGGAGGCGGAAGCCAGGCGAGACCTCGGGGA
CAGGTACCCCGGGCTGCCGGCGGAGGCCGCGGCGATGCTGGAGGCCAAGG
CGGCGGCCGGCGGTGGCGGTGGCGGACGAGAGCTCCGAGAAGAACGGGGG
TAGAAAAAAATATGATGGCGTTTTTGCTTGGCAGAGCGTGAGGGACACCA
GTGGCGCGTCGGCTTGGGTTCAACCAACGTGGCCTGAAGATGAACAACAA
CAACAACAACAAGGAGAAGAGGAGGAGGACGCACGAGAATCCAGGTTGAA
TCGAAGGCGGCGGAGGCAACGACTTAGTGAGCGTCCCGCAGGCCACGCCC
ATTTCGGCCCCGCCCCCGTGTACTTGTATTGCGATTTTGTCTAACGTTTT
TGCTGCATGGTTCGTTTTTATTCCGCAACGGCGCAGAGTGCTACTTCTGA
GTCCAATGGCTGTTCTCTTTTGTCAAAAATGCGGTTCTTTACTTGACTAG
ATGAGATGGCTCCACCAGCACAGCCAGTTGAGCACAGATGCATTAGCATT
TTCGATACTCTGTTTTGGGCCAACAGCTGTGCCCATGGCGGTAGTGATGG
TGTACCATGTTCCTGCAGTAGTATACTTGTAGCAGCACAACCTTATTGGA
GTAAGACTACTTTCAGAGGCCCTCCGCAAGAGCGAAGTGCGTTTGGCTTT
GCCTGCTCTACGCTTTGAGCGGCTAAAAAATTAGCACGACGAGGCGCTCT
GTAACAGCAGTTATTATACCTGTTGTTCCGTTCTTGGTCGTATCTACCGC
GAGTTCAATGAGCCATAGACGGAACCTAAACTAGGTGACCACGCTACTGC
GTTTGACTTGTTTTGCCAATCGGCGTCCCCCTTTTCCGTTTTTTCCGCAG
ACGGTGTGTTTGTTTCCCGCCAAGAAAAGTAGAAAAGTACAATTGTCGGC
GGTGCCACATGAACATGCACAACTTTGCCGCCTCTCTCCTACGATGTGTA
GGGTCGGTGTGTTTGATCTAGAGCACGAGAGCACCAACTCCCCGAGACTG
TAGCGTCTCGCGTGCGTTTTGACTTTTGGGGCTAATGAAGCATATTATTT
GTACATCCATGCAATCCAAAGCGAGT
back to top

Coding sequence (CDS) from alignment at C-linearis_contig87:769971..777396-

>mRNA_C-linearis_contig87.16324.1 ID=mRNA_C-linearis_contig87.16324.1|Name=mRNA_C-linearis_contig87.16324.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2550bp|location=Sequence derived from alignment at C-linearis_contig87:769971..777396- (Chordaria linearis ClinC8C monoicous)
ATGGCGATGCTGAGGAAGGTAGCGCTACGCAGTGCGGGAGCCTTAGGATT
GGCTTCTGTCGGTGCAGCTTACGTATGGCGATGCTGAGGAAGGTAGCGCT
ACGCAGTGCGGGAGCCTTAGGATTGGCTTCTGTCGGTGCAGCTTACGTAT
ATCGGCCTGACCCATGGTCAAACCCGCCGAGGGACCCGCTGAGCGAGCGC
GCGGGACACGGGCTGGAGGAGGGTAACTTGCTGATGAGGGCATCTAGGGT
CTTCACCTTCGTCGCTGGGACCGCGGCGTTTTCCTTCCTGATGCACGTCC
TCAACACATATCGGCCTGACCCATGGTCAAACCCGCCGAGGGACCCGCTG
AGCGAGCGCGCGGGACACGGGCTGGAGGAGGGTAACTTGCTGATGAGGGC
ATCTAGGGTCTTCACCTTCGTCGCTGGGACCGCGGCGTTTTCCTTCCTGA
TGCACGTCCTCAACACGTTTGAGTTGAAAGAAGACAAGCACTACGACAAG
TTCCTCGGTCTGGTCAAGGGCCGCCCACGGGGGGTGCCCCTCCTGACGGT
GTCCAACCACTGCTCCCCGCTCGATGACCCGGGCGTACTGGTGGGCATGC
TGCCCTCGAGCGTCACGGTGAGGCCGGGGCTGATGCGCTGGACCATCTGC
GCGCAGGAGATCTGCTTCAAGTGGACCTCGGCCGGGATCGGGTTCGGCTC
CGCAAAGGCGCGTGTTTGAGTTGAAAGAAGACAAGCACTACGACAAGTTC
CTCGGTCTGGTCAAGGGCCGCCCACGGGGGGTGCCCCTCCTGACGGTGTC
CAACCACTGCTCCCCGCTCGATGACCCGGGCGTACTGGTGGGCATGCTGC
CCTCGAGCGTCACGGTGAGGCCGGGGCTGATGCGCTGGACCATCTGCGCG
CAGGAGATCTGCTTCAAGTGGACCTCGGCCGGGATCGGGTTCGGCTCCGC
AAAGGCGCGTGTGATGCCCATCGCGAGAGGGAGCGGAATCGACCAGCGGT
TGCTGCTCAACTTCTACCGCCGATTGCTGGGGGGAGGATGGTGTCACATT
TTTCCAGGTGATGCCCATCGCGAGAGGGAGCGGAATCGACCAGCGGTTGC
TGCTCAACTTCTACCGCCGATTGCTGGGGGGAGGATGGTGTCACATTTTT
CCAGAGGGCCACTGCGAGCAGGACGGCTCCCTCGGCGGCCGCGCGGCGGG
CCTCGGGCGCGAGGAGCTCGGCCGCCTCAAGTGGGGCGCCAGCAAGATGA
TCGCGCACGCCCCCGTCACCCCCGTTGTCATCCCGCTGTTCCACACCGGC
ATGGCCGAGCTCGTCCCCATCAACCCCTTCACGCGCAAGATCCTGCGCGC
GGTGCCCGGAACGGGGAACACGGTCACCGCACGCGTGGGTGGCGAGATCA
GAGGGCCACTGCGAGCAGGACGGCTCCCTCGGCGGCCGCGCGGCGGGCCT
CGGGCGCGAGGAGCTCGGCCGCCTCAAGTGGGGCGCCAGCAAGATGATCG
CGCACGCCCCCGTCACCCCCGTTGTCATCCCGCTGTTCCACACCGGCATG
GCCGAGCTCGTCCCCATCAACCCCTTCACGCGCAAGATCCTGCGCGCGGT
GCCCGGAACGGGGAACACGGTCACCGCACGCGTGGGTGGCGAGATCAGGT
TCGACGACTTGATCGAGGACCACGAGAGACGGCACGGCCCGCTCCGAAAG
CTAGCCCTGCCGAGCCCACCGTCACCACCACTACCACCACCACCACAAAC
CTCTTCTGCGACTGGGGCGGACGCGAGAGGGCGGAGAGAAGGCACGGAGG
CATCGCCGTCATCATCTACCGCTGAATCATCAAGAGGAGGAGACACAACA
GCAGCGGCCGTGATCCCCGGGGGCAGGGAAGGAGATGTCCTCTGGAAGTC
TACCCGCGAGGAGCGGCAGTTGTACAGCAGGATCGCCCGGAGAGTGGAGG
AAGCGCTGCTCCGGCTGGAGGCGGAAGCCAGGCGAGACCTCGGGGACAGG
TACCCCGGGCTGCCGGCGGAGGCCGCGGCGATGCTGGAGGCCAAGGCGGC
GGCCGGCGGTGGCGGTGGCGGACGAGAGCTCCGAGAAGAACGGGGGTAGG
TTCGACGACTTGATCGAGGACCACGAGAGACGGCACGGCCCGCTCCGAAA
GCTAGCCCTGCCGAGCCCACCGTCACCACCACTACCACCACCACCACAAA
CCTCTTCTGCGACTGGGGCGGACGCGAGAGGGCGGAGAGAAGGCACGGAG
GCATCGCCGTCATCATCTACCGCTGAATCATCAAGAGGAGGAGACACAAC
AGCAGCGGCCGTGATCCCCGGGGGCAGGGAAGGAGATGTCCTCTGGAAGT
CTACCCGCGAGGAGCGGCAGTTGTACAGCAGGATCGCCCGGAGAGTGGAG
GAAGCGCTGCTCCGGCTGGAGGCGGAAGCCAGGCGAGACCTCGGGGACAG
GTACCCCGGGCTGCCGGCGGAGGCCGCGGCGATGCTGGAGGCCAAGGCGG
CGGCCGGCGGTGGCGGTGGCGGACGAGAGCTCCGAGAAGAACGGGGGTAG
back to top