mRNA_C-linearis_contig86.16220.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: D8LSC2_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC2_ECTSI) HSP 1 Score: 579 bits (1493), Expect = 7.510e-195 Identity = 324/383 (84.60%), Postives = 339/383 (88.51%), Query Frame = 2
Query: 1277 MEKELVAALFGSGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRTGQGXXXXXXXXXXXEVEGILSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGLESPLMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAGEPESDVQPVLTGIVEPLLRACRLSADGLDPSDGAVFMLNNIDVVREALVAHAHTEKWTLELTAEMDKWLGVLVRHQADKVLGRCGVAQAVRAAEAAEGQTGAVNDLPGLQERPLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHRLVSREDSGYENRSFLLHTPEQVRMLLDCD 2425
MEKELVAALFG XXXXXXX XXXXXXXX AG G E EG++SAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGL+SP++E+LSECRKNADDTFR+AMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAGEPESDVQPVL+GIVEPLL+ACRLSADGLDPSDGAVFMLNNID +REALVAHAHTE WTLELT EMDKWLGVLVRHQADKVL RCGVAQAVRAA AAEGQTG +N++PGLQER LSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTA+LVAEAHE VHRLVSREDSGY +RSFLLHTPEQVRMLLDCD
Sbjct: 1 MEKELVAALFGXXXXXXXXXXNDSXXXXXXXXALAPGDGAAGAAAG-----------------EGEGLMSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGLDSPVLEALSECRKNADDTFRHAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAGEPESDVQPVLSGIVEPLLKACRLSADGLDPSDGAVFMLNNIDAIREALVAHAHTEAWTLELTTEMDKWLGVLVRHQADKVLERCGVAQAVRAAAAAEGQTGPMNEVPGLQERSLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTAMLVAEAHETVHRLVSREDSGYADRSFLLHTPEQVRMLLDCD 366
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: D8LSC3_ECTSI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC3_ECTSI) HSP 1 Score: 511 bits (1315), Expect = 7.920e-169 Identity = 274/316 (86.71%), Postives = 284/316 (89.87%), Query Frame = 2
Query: 296 MASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNN-SSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEALSAPLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTLEEETPAADVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVRYV 1240
MASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSD + SS+ AA DGEKAGG GHEY+TLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGL+GCV GLEDGC+SIS RLSAADASMQQFTLRAE LRDQR+QLGKHADQVSLFL +FQLTP+EVEALSA LEPDQG RFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLS+HQE AYERLYRWVQ+RCQTLEEETPAADVTLQA AVR LRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVR V
Sbjct: 1 MASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDHSTGSSSGAAATTADGEKAGGAGHEYNTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLEGCVAGLEDGCSSISGRLSAADASMQQFTLRAETLRDQRSQLGKHADQVSLFLERFQLTPDEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSKHQEAAYERLYRWVQDRCQTLEEETPAADVTLQA--------------AVRCLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVRCV 302
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: A0A836CBI3_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI3_9STRA) HSP 1 Score: 425 bits (1092), Expect = 4.590e-131 Identity = 300/750 (40.00%), Postives = 397/750 (52.93%), Query Frame = 2
Query: 302 SRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNNSSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLD---------------------GC--VVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEALSAP---LEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQER---CQTL--EEETPAADVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSSVRPIEMQAHDPVRYVGDILAWVHQAVAMEKELVAALFGSGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRTG-QGXXXXXXXXXXXEVEGILSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGLESPLMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAGEPESDVQPVLTGIVEPLLRACRLSADGLDPSDGAVFMLNNIDVVREALVAHAHTEKWTLELTAEMDKWLGVLVRHQADKVLGRCGVAQAVRAAEAAEGQ---------TGAVNDLPGLQERPLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHRLVSREDSGYENR-SFLLHTPEQVRMLLDCD 2425
S+VL++KL++VL++ TD+P+L+ +L+AIS F D +AG S+LD R+SLR+DLE+QNYNLS CF KSFERL+ RLE L+ G V GLEDGC S S RLS+A++SM+QFT RA+ALR +RA+L + A QV FL FQLTPEE + A EP FF+AL RL+ A C LVGS QSAGFELL+ LS+H E AYERLY WVQ R CQ +EETP AD TLQ AVR+LR RP YY+HCQESIV+MRR+L+ QRFV L + + M+ D VRY D+LAWVHQ A E+EL+AALFGSG G E D G G G+++ L V+ +ARPL++R+ TVLE VR+A YRLL LAFY TVGQL L +L+E R + FR + RL A+ A ADLS L A L+ A+R E+++ +T L A PE + P L +EP L AC A G+D SD V E R +VL RCG+ + +RAA + + PGL+ +++ + +FYS+LF+L MP+ ER+R P + AR+ ++ +A+AH +H ++S +GY + SFL HTP+QVR++LDCD
Sbjct: 2 SKVLERKLRRVLELSTDSPSLVVALDAISPFFE-------------ADSVQAG----RSSSLDVRKSLRQDLEKQNYNLSLCFLKSFERLKGRLESLEQEVDQPQLKSNFKLSAMTLLRGARQVDGLEDGCRSASARLSSAESSMRQFTDRAQALRHRRAELSRRARQVERFLHTFQLTPEEAALVGAAGGLEEPAAARAFFAALARLRAAHARCTALVGS--QSAGFELLDALSRHLEGAYERLYHWVQARRVKCQEQLSDEETPQADGTLQV--------------AVRALRARPAYYSHCQESIVSMRRRLVAQRFVAELAQARGAADGRAMEGIDCVRYTADVLAWVHQTAAAERELLAALFGSGGDAAHNGARRLGGGSGSS---------GGAEPADADGVDGAAEAGGADADAGSAGLVTVPAALSGVMSAVARPLRARLGTVLEDVRDAVTAYRLLGFLAFYGETVGQLVDSREGLGLALTEARADGLTRFRALLSAPAQRLAATTHA-PADLSPLGATLEAARRAQELVRAAAT-LPAATAPECALAPPLAAALEPPLDACARIARGMDASDA----------VSEPR-------------------------RRACAQVLERCGLGRVLRAAATXXXXXXXXXXXXXAAPLAEQPGLEAHTVASAMAAFYSALFSLTMPELERVRAPLVKGRARQLSSRQIADAHAHLHGVLSAPAAGYRDAASFLSHTPDQVRIILDCD 672
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: A0A7S2S2C7_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2C7_9STRA) HSP 1 Score: 421 bits (1083), Expect = 4.940e-129 Identity = 291/778 (37.40%), Postives = 415/778 (53.34%), Query Frame = 2
Query: 302 SRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNNSSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEAL-----SAPLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTLEEETPAA------DVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQ--SSVRPIEMQAHDPVRYVGDILAWVHQAVAMEKELVAALFGSGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRTGQGXXXXXXXXXXXEV---EGILSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVG-------YRLLNLLAFYRATVGQLA---------------GLESPLMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSL--------------------------------VPAGEPESDVQPVLTGIVEPLLRACRLSADG-LDPSDGAVFMLNNIDVVREALVAHAHTEKWTLELTAEMDKWLGVLVRHQADKVLGRCGVAQAVRAAEAAEGQTGAVNDLPGLQERPLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHRLVSREDSGYENRSFLLHTPEQVRMLLDC 2422
S VLD+KLKK L++RTDTP +LE+L++I + E +TL+ARR+LR++LE QN L+ F +F L +RLE + G V LE C +++ R+S A+ +MQ+FT RA L ++R ++ +HA++VS FL ++ ++ EEVEAL P QG RFF AL RL+ VR C RLVGS QSA FELLE LSQ QE AY+R+Y WVQ+R ++ + D + + + A+ +LR RP ++ HCQE + + RR LVQRF+ ALT G + RPIE+QAHDPVRY+GD+LAW+HQA+A E++ +A+LF +GG G R +G XXXXXXXXXXE+ S ++L V++G+ARPL+ R + V+E+ G G YRL +L+AFY TV ++ G + L +L CR A + F ++R ++L + P + DLS + KRLTE+LQ+H+ S VP E E ++ +L I+EPLL CR SA+G LD D A M+N + A+ + W+ +LTAEM WLGVLV H+A+++LG CG+ ++ E + G ++ PGL + + FYS++F L +P FERL R AR+ A +A AH++V+ LV + Y + SFL HTPEQVRMLLDC
Sbjct: 2 SAVLDQKLKKALELRTDTPVMLEALDSIGEFW-------------------------ESNTLEARRNLRQELEHQNVALARQFISAFAPLEERLEKVGGVVDALEASCGTMATRVSQAEQAMQEFTKRANELTEKRKEVQQHAEEVSAFLSQYSMSDEEVEALLTLPIETPSADGQGIRFFHALGRLREVRDECCRLVGSKHQSAAFELLEVLSQQQEKAYDRVYEWVQQRANAMDGSSGDPFGIMDIDDSAHRVF----------REALTALRARPGFFRHCQECVASARRTGLVQRFIAALTIGGPGGTPRPIELQAHDPVRYLGDMLAWMHQALASERDFLASLFADDDRAPGALSVTPP---------------SGGGGGVRYSEGEXXXXXXXXXXELLEDSTPRSLSDLLSFVVEGMARPLRVRATGVIEAKLSEGTGTGSLVLSYRLYHLVAFYHFTVVKVLRGRHVDQQNWAAAPKGSFTSLEATLGSCRLLAVEAFSGQLQRYAEQLGRAAPTFPLDLSTSATISEHLKRLTELLQIHTDSFLSDEERRSLAALDPVSGQQSEDVENEGKEVIDVPVKEDECGIEAILATILEPLLTTCRQSAEGRLDAGDTATLMINAAHTMHGAVESFQTAADWSRDLTAEMQTWLGVLVSHEAERLLGECGLTSLLQTMEVMKVH-GTASEQPGLDAASVERAMLDFYSTIFALAVPSFERLAPLEVREAARKGVAERIANAHQSVYNLVKDPANKYGDSSFLQHTPEQVRMLLDC 728
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: A0A6H5LBT5_9PHAE (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBT5_9PHAE) HSP 1 Score: 382 bits (982), Expect = 4.620e-121 Identity = 209/251 (83.27%), Postives = 219/251 (87.25%), Query Frame = 2
Query: 296 MASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNN-SSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQ------VSLFLRKFQLTPEEVEALSAPLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTLEEETPAADVTLQ 1027
MASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSD + SS+ AA + EKAGG GHEY+TLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGL+GCV GLEDGC+SIS RLSAADASMQQFTLRAE LRDQR+QLGKHADQ VSLFL +FQLTP EVEALSA LEPDQG RFFSALLRLKTVRASCGRLVGSSPQSAG +HQE AYERLYRWVQ+RCQTLEEETPAADVTLQ
Sbjct: 1 MASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDHSTGSSSGAAATTANAEKAGGAGHEYNTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLEGCVAGLEDGCSSISGRLSAADASMQQFTLRAETLRDQRSQLGKHADQARGEKEVSLFLERFQLTPNEVEALSAQLEPDQGRRFFSALLRLKTVRASCGRLVGSSPQSAG--------KHQEAAYERLYRWVQDRCQTLEEETPAADVTLQ 243
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: W7T6J5_9STRA (Conserved oligomeric Golgi complex subunit 6 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6J5_9STRA) HSP 1 Score: 391 bits (1004), Expect = 9.260e-118 Identity = 264/757 (34.87%), Postives = 399/757 (52.71%), Query Frame = 2
Query: 305 RVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNNSSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEALS----APLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTLEEETPAADVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTS--------------GQSSV-----RPIEMQAHDPVRYVGDILAWVHQAVAMEKELVAALFGSGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRT--GQGXXXXXXXXXXXEVEGI-LSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVG--------------YRLLNLLAFYRATVGQLAGLE---SPLMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAGEPESDVQPVLTGIVEPLLRACRLSADGLDPSDGAVFMLNNIDVVREALVAHAHTEK-----WTLELTAEMDKWLGVLVRHQADKVLGRCGVAQAVRAAEAAEGQT-GAVNDLPGLQERPLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHRLVSREDSGY-ENRSFLLHTPEQVRMLLDCD 2425
RVL +K++K+++ RTDTPA+LE+L+AI+ + G++ GG +T +AR+SLR+DLE+QN L F + FE L++RL LD LED C I R+ A+ SM F + L+ Q+ + A Q+ FL F L+ E+ AL + PD FF+AL R + +R CG LVGSS Q+ GFE+LE+LS+HQETA+ RL+ ++ +RC LE + P +V + +R++RDRP + HCQE ++ R+ ++ +RF+ AL+ G+ S+ RPI+M +HDPVRY+ DILAW+HQAVA E+E + LF + G +G+R G+G E LS +L +++G+ L++R+ +LE GV +RLL+LLAFY T +L GL S L +S+ E R F ++ G + + S PA DLS + + L E++ VH SLVP G + VLT ++EP LRACR A+GL PSD A++M+NN ++ +L + + W +L EM+ WLG++VR++++ VL R G+ + A+A + G ++ GL ++ + +FY LFTL P FERL++P RA AR+ T+ ++A+ HE H L R +SGY ++ +FL HTPEQV++LLDCD
Sbjct: 19 RVLKQKVRKMVECRTDTPAMLEALQAIAAFY----------------GQREGG-----NTAEARKSLRQDLEKQNMVLCDDFLRLFEVLKERLAALDAHTARLEDHCHGIHARIETAEESMSAFLAKTRVLQKQQVECESKAVQLQDFLDNFTLSDAEIAALRYEAVEKVLPDGHRPFFAALARAQEIRGECGALVGSSRQNLGFEMLEELSEHQETAFRRLHSYILQRCAGLERDDPQEEVEENDVA---------LGLGLRTIRDRPALFVHCQECVLQRRKDVVRRRFLQALSGRDEGAEDGDVREEKGKRSMSGSGQRPIDMHSHDPVRYLSDILAWLHQAVASEREFLTNLFRPEAPG------------------------GSGGQGERPLPGEGVPTDGQESGTLEDHNQELSQAAMLGGIMEGVVALLKARILQLLEPADSYGVTNRESNATRSQIFLLFRLLHLLAFYDVTFQKL-GLTADASALGKSMRETRVECQRRFEGRLEAWGSQSLMSVPACPIDLSPAQVMGELGQSLAEIVAVHEASLVPPGALGYALDEVLTALIEPALRACRSGAEGLGPSDVALYMINNAAILSASLTSGSDPPSPAVTAWVEKLREEMETWLGLVVRYESETVLERTGLGPLLDRAQAVSASSSGTLSATAGLDSESVTRTMEAFYRGLFTL--PQFERLQQPALRARARQQTSAIIAQRHEKAHALFRRAESGYPDHETFLAHTPEQVKILLDCD 718
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: A0A7S2SLV6_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SLV6_9STRA) HSP 1 Score: 372 bits (955), Expect = 1.190e-111 Identity = 246/725 (33.93%), Postives = 375/725 (51.72%), Query Frame = 2
Query: 299 ASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNNSSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEALSA-PLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTLEEETPAADVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSG--QSSVRPIEMQAHDPVRYVGDILAWVHQAVAMEKELVAALFGSGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRTGQGXXXXXXXXXXXEVEGILSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGLESP---LMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAG--------EPESDVQPVLTGIVEPLLRACRLSADGLDPSDGAVFMLNNIDVVREALVAHAHTEKWTLELTAEMDKWLGVLVRHQADKVLGRCGVAQAVRAAEAAEGQTGAVNDLPGLQERPLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHRLV-SREDSGYENRSF---LLHTPEQVRMLLD 2419
A +L +KL K+ +MRTDTPA+LE+L+A+ST +S N+ L+ARR+LR DLE + L F FE ++ R++ + V + D C ++E+L+ + + +F +A+ L ++RAQ + A+ + FL++F+L+ ++ ALS P + D G FFSAL ++ +R C L+ S QS G EL + ++ QE AYE+LY WV+ +C L+ E P AD LQ +++L P YY H ++ IV R + RF ALT G + RPIEM AHDP+RYVGD+LAW+H+++A+EK LV LF G + E + E L + +G+ PL RV VL S + +++ NLL FY T L L++P +++++ +K A TF + ++ D+L+ASPPAY DLS + +RL E+L VH+ ++ + E P+L ++PLL CR SA GLD SD AV+++NN+ ++ +L + T W LT E+ W+ VLV+ Q+D +L +A+ + E A+ T V+ PG+ L + L SFY SLF+LVMP+F+RL P RA AR +TA +A ++EA + V +E SG + S LLH P+QVR L+D
Sbjct: 5 APALLKRKLAKIQNMRTDTPAMLEALDALSTFYSPTENN-----------------------LEARRNLRGDLESRGLMLVDKFIGEFEPIQSRIDLVSKNVKEVHDICDMLTEKLNTSASKTNEFAKQAKTLANKRAQFVERANVMDDFLKRFKLSENQLNALSGGPQDQDGGAMFFSALEDVQRIRDECQDLISSQFQSTGLELFDAMASFQEQAYEQLYGWVRAQCIGLDAEFPDADEALQK--------------GIKTLAQAPAYYEHARDCIVETRSTSMATRFAFALTHGGPHGNPRPIEMHAHDPLRYVGDMLAWIHKSMAVEKSLVFRLFAPGE-------------------------------------------------DAEIKAANVETLNSIFKGVVPPLVGRVEQVLHSFPPLVLAFKICNLLEFYVGTFKLL--LDTPTGLVVDTIQGLQKEASGTFFSIVQSHCDKLLASPPAYPRDLSVALEVNELIRRLGEILVVHNEAMASGDASGIGSTQDREERFAPILDAFIDPLLAMCRQSASGLDRSDAAVYIVNNMVAIQSSLTRYDFTVSWVQRLTTEIGDWVDVLVKEQSDNILRHSAMAEKIECIERADPSTPLVSQ-PGMDIESLRSALDSFYKSLFSLVMPEFDRLTSPRLRASARNATAQTIANSYEAFYNAVMDKERSGIDEASLKGILLHNPQQVRQLVD 640
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: A0A2R5GVE9_9STRA (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVE9_9STRA) HSP 1 Score: 344 bits (883), Expect = 7.720e-101 Identity = 243/720 (33.75%), Postives = 356/720 (49.44%), Query Frame = 2
Query: 308 VLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNNSSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEAL-SAPLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTLEEETPAADVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQS--SVRPIEMQAHDPVRYVGDILAWVHQAVAMEKELVAALFG-SGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRTGQGXXXXXXXXXXXEVEGILSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQ-LAGLESPLMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAG-------EPESDVQPVLTGIVEPLLRACRLSADGLDPSDGAVFMLNNIDVVREALVAHAHTEKWTLELTAEMDKWLGVLVRHQADKVLGRCGVAQAVRAAEAAEGQTGAVNDLPGLQERPLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHR-LVSREDSGYENR---SFLLHTPEQVRMLLD 2419
V KKLKKV +MRTDTPA+L++L+A++ F ++N TL+ARR+LR DLE + L F FE ++ ++ L V + C + +RL +F + L +R + + + FL++F+LT ++ AL P D G FFSAL ++ +R C L+ S QSAG EL + ++ Q AYE+L+ WVQ +C L+ + P L+ + +L + P YY + I R + RF ALT G + + RPIE+ AHDP+RYVGD+LAWVHQA+A+EK LV ALF + + GD +G E + L + QG+A PL RV VL S V +++ NLL FY+ T+ LA + +E++ A +TF ++K + D+L+A+PPAY DLS + +RL+++L VH +L A E E PVL + PL++ACR SA GLD +D AV+++NN+ ++ +L + T W LTAE+ W +LVR QAD +L R G+A + A+ PG+ L VL SFY S+F+LVMP+F+RL P RA AR +TA +A +E + L SGY+ + LLH P+QVR LLD
Sbjct: 6 VFRKKLKKVQEMRTDTPAMLDALDALAAFFPEEN------------------------TLEARRNLRADLETRGLELVEKFVAEFEPIQSSIDVLSRSVEDIHLVCDDLVDRLDKCAEETSKFKELTQDLASRRNDAVERSKVMENFLKRFKLTDAQLLALRQGPQGTDGGALFFSALEDVQRIRTECQALISSQFQSAGLELFDAMAVFQGQAYEQLFGWVQSQCGQLDPDFPDPSEALKR--------------GIATLVEAPAYYDQARNCIAEHRSAAIAARFAAALTQGGAGGAARPIELHAHDPLRYVGDMLAWVHQAMAVEKRLVFALFPLNPHPSVEAPPTLQDMEKAVTGETSLEDSKETAKVGDSDVEGSKSAEDNETKKEATPLERNVATLDVIFQGVAGPLGGRVRQVLASEPTLLVVFKMTNLLEFYQGTLENVLASPRALAVETIGGLHAAAQETFFMSVKAQCDKLLAAPPAYPRDLSVALEVSELIRRLSDILAVHDEALSTAALEAQTAEERERRFAPVLNAFIGPLMQACRQSASGLDRADAAVYIINNLVAMQSSLTRYDFTVSWVQRLTAEIGDWTDLLVREQADAILRRSGMADKMELIARADPSQPLAQQ-PGMTLDALREVLDSFYKSMFSLVMPEFDRLSSPRLRASARNATAGAIAATYEQFYATLQDLSRSGYQPAQLSNILLHDPQQVRQLLD 686
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: A0A1Y1I409_KLENI (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I409_KLENI) HSP 1 Score: 316 bits (810), Expect = 3.550e-90 Identity = 235/790 (29.75%), Postives = 373/790 (47.22%), Query Frame = 2
Query: 278 IAAAAIMASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNNSSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEALSAPLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTL-EEETPAADVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSS--VRPIEMQAHDPVRYVGDILAWVHQAVAMEKELVAALFGSGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRTGQGXXXXXXXXXXXEVEGILSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGLESPLMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAGEPESDVQPVLTGIVEPLLRAC------------------------------------------------RLSADGLDPSD----------GAVFMLNNIDVVREALVAHAHTEKWTLELTAEMDKWLGVLVRHQADKVLGRCGVAQAVR-------AAEAAE--GQTGAVNDLPGLQERPLSAVLRSFYSSLFTLV---MPDFERLRRPGTRADARRSTALLVAEAHEAVHRLVSREDSGYENRSFLL-HTPEQVRMLLDCD 2425
+AA A +A + +KLKKVL+ RTD+P LL SL +ST +++ +TL ARR LR +ER+ ++ F ++ E + L+ ++ V GL C I+ L + + E L+ + + + V+ FL+ +QLTP+EV AL E D FF AL R++ + A+C L+ + Q AG EL++ ++ +QE AYERL RWVQ C++L E +TP L+ A RSLRDRP+ + +C E + N R L +RF+ AL+ G +PIEM AHDP+RY GD+LAW+HQA+A E EL +ALF H+ +GD VE A VL ++ +G+ RP + RV VL+ + Y+L+NLL FY AT+ L G ++ L ++L + A TF + MK+ GD+LV PP + DLS PA +G L E++ V+ T + PA P+ D +P+++ ++ PLL+ C R SAD SD ++++N + +++ L HA ++W L + + + L R + +L CG+++ + AE+ E G + A++ L + + LR+FY+ + +P+FE+++ P R+ A +AEA+EA+H++VS +GY + LL H+P Q+R +L D
Sbjct: 1 MAAQATLAPGI-SRKLKKVLETRTDSPELLASLATLSTFYNE-------------------------NTLQARRGLRTTIERRGLTINEEFLQASEGAQRALDTVEAEVEGLAACCNRIAVALQGCSSQTGDMVVATERLKQELESSLRRQELVNNFLQSYQLTPDEVIALR---EEDLDENFFKALARVQEIHANCKILLRTHHQRAGLELMDVMAVYQEGAYERLCRWVQAECRSLGENDTPEVSGLLKT--------------AARSLRDRPVLFKYCSEEVANTRHNALFRRFLSALSQGGRGGMPKPIEMHAHDPLRYCGDMLAWLHQALASEFELASALFSDDRKGTQEQREARSASKRFSE-------HSDQSDGD---------------FRVEAADMAS-VLDRIFEGVCRPFKLRVEQVLQGQLSPVLAYKLMNLLDFYCATITDLLGTDAALSQTLQGVCEAAQKTFMDLMKQRGDKLVRYPPPLSPDLSPPPAVAEGVSLLLELVDVYDTCMAPANVPKPDFEPIISAVINPLLQMCERAAEAFGTKSAIPASMRRMSSETFGRRGSGSPSLQRRGSTSMDGFMRRKSADAGSRSDVPSPEVIQAIRQMYLVNCLSSIQQPLSQHAVAKRWIPRLEDSITEHINNLARQEVKSILDSCGLSEKLTFIFEQESLAESGEAGGSSQALSSLESMSPSAVGESLRAFYALVAGSTDGGLPEFEQIQPPRLRSKAAGEVTKALAEAYEAIHKVVSDPKNGYTDLGNLLRHSPAQMRTILGTD 724
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Match: K3X0D2_GLOUD (Conserved oligomeric Golgi complex subunit 6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0D2_GLOUD) HSP 1 Score: 298 bits (763), Expect = 4.320e-84 Identity = 212/737 (28.77%), Postives = 349/737 (47.35%), Query Frame = 2
Query: 278 IAAAAIMASRVLDKKLKKVLDMRTD---TPALLESLEAISTLFSDQNNSSTPAAGAAGDGEKAGGGGHEYSTLDARRSLREDLERQNYNLSACFQKSFERLRDRLEGLDGCVVGLEDGCASISERLSAADASMQQFTLRAEALRDQRAQLGKHADQVSLFLRKFQLTPEEVEAL-SAPLEPDQGNRFFSALLRLKTVRASCGRLVGSSPQSAGFELLEQLSQHQETAYERLYRWVQERCQTLEEETPAADVTLQAIHPPNASPPPDPQAAVRSLRDRPLYYAHCQESIVNMRRKLLVQRFVMALTSGQSS--VRPIEMQAHDPVRYVGDILAWVHQAVAMEKELVAALFGSGSXXXXXXXXXXXXXXXXXXXXXXXXXHAGGEEGDRTGQGXXXXXXXXXXXEVEGILSAEEVLCKVLQGIARPLQSRVSTVLESVREAGVGYRLLNLLAFYRATVGQLAGLESPLMESLSECRKNADDTFRNAMKREGDRLVASPPAYTADLSALPAALDGAKRLTEVLQVHSTSLVPAGEPESDVQPVLTGIVEPLLRACRLSADGLDPSDGAVFMLNNIDVVREALVAHAHTEKWTLELTAEMDKWLGVLVRHQADKVLGRCGVAQ---AVRAAEAAEGQTGAVNDLPGLQERPLSAVLRSFYSSLFTLVMPDFERLRRPGTRADARRSTALLVAEAHEAVHRLVSREDSGY------------ENRSFLLHTPEQVRMLLDCD 2425
+A AA + + L +++K+L R + T ALL +L +S + + + S+PAA + S D R++LR LE + + L+ + ++ L V L+ C I + L QQ A L +++ ++ +++ FL ++QLT +E + L + L D + F + R++ V+A C LV + + ELL+ + ++QE +ERLY+W ++C ++ E +H A+ LR+R +Y +C+E + RR ++V+RF++ALT G + RPIEM AHDPVRY GD+LAWVHQA+A E E LF + GEEG +A ++ K +G+ARPLQ R+ L S + Y+L+ LLAFY G L S + ++L CR ++ F +++ D + +S Y+ +LSA A +D ++RLT +L+V TSL+P E E D+ P+ GI+ + + C S +GLD D VF +NN+ ++ L KW + A++ +WL L + VL RC + +++ + +E T A +D PGL +S+V+ F + L TL+ P +++ +P R AR T +A + ++ VS GY N L HTP++VR +L+ D
Sbjct: 1 MATAAALPANALQARVQKLLSSRAEIESTKALLHTL-VVSDASAARASGSSPAAPIVAIDVTS-------SLADLRKNLRTSLEEKQFALAESVLQGLGSTLAKISLLKDNVESLDAKCTQIQQFLETTKRETQQVQAEAALLSEKKERMQHELEEIREFLGRYQLTEQETQGLHTKSLSDDHVHGFLGIMERVQQVKADCRALVAAGDVNCALELLDAVGKYQELGFERLYQWTSKKCSEMDGEP------SNQLH-----------RAIALLRERVEFYNYCKECVTASRRSVIVRRFIVALTRGGPNGIPRPIEMHAHDPVRYCGDMLAWVHQAIATENEFFRVLFDGD-----------------LEYIPEVNQESEGEEG--------------KLFAPTSTPAAASMVGKAFEGVARPLQVRIEQTLSSPHGIVIAYKLVLLLAFYHHKFGTLVR-HSGIAKALEHCRDASNHAFHQQLRQLVDTVASSAQDYSTNLSATHATMDASQRLTALLEVFQTSLLPDNEKEDDLTPLFDGILPAVAQMCARSIEGLDAIDALVFQINNLSCIQVPLAKFPEAAKWHQSIGADISRWLRELSELETKSVLERCNASSLLHSIQHFQTSETTTTAASDAPGLDGATISSVMDLFCNVLQTLIFPQLDQIAQPDLRDSARSLTVTQLAATYAFIYDFVSDPKHGYTPSRRASGAPTSRNVVVLAHTPQEVRTVLEID 680 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig86.16220.1 >prot_C-linearis_contig86.16220.1 ID=prot_C-linearis_contig86.16220.1|Name=mRNA_C-linearis_contig86.16220.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=711bp MASRVLDKKLKKVLDMRTDTPALLESLEAISTLFSDQNNSSTPAAGAAGDback to top mRNA from alignment at C-linearis_contig86:287676..297247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig86.16220.1 ID=mRNA_C-linearis_contig86.16220.1|Name=mRNA_C-linearis_contig86.16220.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9572bp|location=Sequence derived from alignment at C-linearis_contig86:287676..297247+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig86:287676..297247+ >mRNA_C-linearis_contig86.16220.1 ID=mRNA_C-linearis_contig86.16220.1|Name=mRNA_C-linearis_contig86.16220.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4266bp|location=Sequence derived from alignment at C-linearis_contig86:287676..297247+ (Chordaria linearis ClinC8C monoicous)back to top |