mRNA_C-linearis_contig86.16202.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig86.16202.1
Unique NamemRNA_C-linearis_contig86.16202.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: D8LSE3_ECTSI (DSBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE3_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 4.820e-103
Identity = 170/281 (60.50%), Postives = 196/281 (69.75%), Query Frame = 3
Query:  117 LLLGSLLTTCSSLIATNCRLREKLNMS-----------TVQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKAGKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVVRAAGPXXXXXXXXXXXXXXXXXXXXXXXRPAEVVLKGAVGTDELMRAFATVSR 926
            L +G LL  C  L+   CR   +L+MS           +V+V+V SDFACPWCYVGKARL AA++AFE  S+  D  GRA +V VSFSPYMID  TQP GE+YL YN+RRWGGDGWTAS+KRS+ KDGC+FAKW TWPNSLLAHRLQ  A  AGKGDQVNSLVFQTIYERGGNASDLETLVSLA EAGL PA+A AYL SREGEED+L++D  AKTEL V GVP F+VR  G                          +E+VL GAV  D+L+RAF +V R
Sbjct:   11 LCIGFLLNECVGLVLFPCRATLRLDMSAAASSSVRDADSVRVQVVSDFACPWCYVGKARLGAAIEAFER-SSTSDGKGRA-RVQVSFSPYMIDPRTQPGGEEYLVYNKRRWGGDGWTASLKRSSKKDGCDFAKWETWPNSLLAHRLQKFADSAGKGDQVNSLVFQTIYERGGNASDLETLVSLAAEAGLSPAEASAYLSSREGEEDVLQDDHTAKTELGVTGVPCFIVRGTGGRESGSGTPDDAVGGGSVGGAGQ---SEIVLNGAVAPDKLLRAFESVRR 286          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: A0A8J9S664_9CHLO (Uncharacterized protein YwbO n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S664_9CHLO)

HSP 1 Score: 188 bits (478), Expect = 1.030e-54
Identity = 93/190 (48.95%), Postives = 121/190 (63.68%), Query Frame = 3
Query:  198 TVQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKAGKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVV 767
            T+ +++ SD ACPWCYVGK RLD A+         D   GRA    V++ PY+ID GT   GEDYLAYN+RRWG D WT S++RS   DG  F  W  WP++L AHRL +LA K G+  +   L+FQ IYERG N SD  TL +L +E GL   +   YL S EG+E++L+ D RAK  L ++ VPYF++
Sbjct:    6 TIVIDIWSDLACPWCYVGKRRLDKAI---------DQCRGRA-DFKVNWHPYIIDHGTNRAGEDYLAYNKRRWGSDSWTQSLRRSGLPDGATFKDWKWWPHTLKAHRLVLLAEKKGRAAEAEELLFQAIYERGQNVSDATTLTALGQEVGLTGVEE--YLESAEGQEEVLQEDARAKQVLGIQSVPYFLI 183          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: A0A1Y1IQU1_KLENI (DSBA domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQU1_KLENI)

HSP 1 Score: 186 bits (472), Expect = 9.710e-54
Identity = 91/194 (46.91%), Postives = 123/194 (63.40%), Query Frame = 3
Query:  189 NMSTVQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKAGKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVVR 770
            N   V ++  SD ACPWCYVGKARLD A++  E  S     AG+  KV V++ PYMID GT P GEDYLAYN+RRWG  GWT S++ S +++G +F  W  WPN+L AHRL  LA   GKG +   ++F+  YE G N S L+ L+   +E  LP  +   YL S +G  ++ + DR AK+ + +R VPYFV++
Sbjct:    8 NAVKVHIDAWSDIACPWCYVGKARLDQAIRNVEMRS-----AGKPLKVEVAWHPYMIDLGTNPAGEDYLAYNKRRWGSGGWTQSLRGSGARNGLKFKDWNHWPNTLHAHRLVDLASSVGKGPEAEDVLFRRTYELGQNVSSLDVLIEAGQELDLPGVEE--YLRSDQGLAEVKQQDRDAKSRMQIRSVPYFVLQ 194          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: UPI0009E6346F (uncharacterized protein LOC110051917 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E6346F)

HSP 1 Score: 182 bits (462), Expect = 2.280e-52
Identity = 100/243 (41.15%), Postives = 135/243 (55.56%), Query Frame = 3
Query:  201 VQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAG--KAGKGD-QVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVVRAAGPXXXXXXXXXXXXXXXXXXXXXXXRPAEVVLKGAVGTDELMRAFATV 920
            + ++V SD +CPWCYVGKARLD A++ F   S           + V++ PY+ID  T PLGEDY+AYN RRWGGDGWT S++++  +DG EF  W TWPNSL  HRL  LAG  K  +G  +   L+F  IYE G N SD++TL+  A+E GL     + YL S    + +L  D RAK+ + + GVPYFV+ +                          +   V L GA GT+  + AF+ V
Sbjct:    2 INIDVYSDLSCPWCYVGKARLDKAIQKFTDAS-----------ITVNWHPYIIDKNTAPLGEDYMAYNTRRWGGDGWTRSLRQAGQQDGLEFKNWKTWPNSLHGHRLIHLAGIQKGPEGQAKAKDLLFHMIYEDGKNVSDVDTLIEAAKELGLEGG--KNYLKSSHDVDLVLSEDSRAKSHMKISGVPYFVISS-----------------------DDKQKKAVSLSGAQGTERFLAAFSHV 208          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: A0A7S3XRH4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRH4_HETAK)

HSP 1 Score: 183 bits (464), Expect = 2.390e-52
Identity = 97/247 (39.27%), Postives = 136/247 (55.06%), Query Frame = 3
Query:  201 VQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILA--------GKAGKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREG-EEDILKNDRRAKTELNVRGVPYFVVRAAGPXXXXXXXXXXXXXXXXXXXXXXXRPAEVVLKGAVGTDELMRAFA 914
            ++++V SDFACPWCYVGKAR++AA+       N +D +     V V + PY ID  TQP GE+YL+YN RRWGGDGWT S++R+  + G  FA W TWPN+L AHRL  L         G +    ++   +F+ IYE GGNAS +E L+ +A   G+     R  + + +G    + + DR AKTEL+V GVP+F+++  G                           +  L GA GTDE + AF+
Sbjct:   10 LKIDVISDFACPWCYVGKARMEAAIAQLR--ENNEDAS-----VEVRWHPYQIDAATQPDGEEYLSYNRRRWGGDGWTHSLRRAGRQSGLGFASWATWPNTLHAHRLMQLVQDLEDDGQGSSDLQGKIKDGIFKCIYEEGGNASTIEQLIQIATSCGMDAEVVRTAMETDDGLTSSVKQRDRYAKTELDVSGVPFFIIQKGGNEEGGSGGR------------------QTALSGAAGTDEFLSAFS 231          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: A0A388LLX2_CHABU (DSBA domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLX2_CHABU)

HSP 1 Score: 182 bits (461), Expect = 4.380e-52
Identity = 92/189 (48.68%), Postives = 121/189 (64.02%), Query Frame = 3
Query:  201 VQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKAGKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVV 767
            V V+V SD ACPWCYVGKARLD+A+ + EG        G+A KV V +  YMID+ T+  GE+YLAYN RRWG DGWT S++ SA +DG  F  W  WPN+L AHRL  LA K G+G +    +FQ  YE GGN S ++ + S+A++ GL     R  L   E   +++  DRRAK +LN+  VP+F+V
Sbjct:   14 VHVDVWSDIACPWCYVGKARLDSAISSLEG-------EGKA-KVDVRWHAYMIDSRTKSNGEEYLAYNRRRWGSDGWTHSLRSSARRDGLAFGDWKWWPNTLHAHRLVHLAEKVGRGSEAKDRLFQKTYEEGGNVSLVDVVCSIADDMGLEGG--RQALERGEAMAEVIAEDRRAKEKLNIHSVPHFIV 192          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: A0A176WK32_MARPO (DSBA domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WK32_MARPO)

HSP 1 Score: 179 bits (454), Expect = 4.550e-51
Identity = 86/187 (45.99%), Postives = 117/187 (62.57%), Query Frame = 3
Query:  201 VQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKAGKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYF 761
            V ++  SD +CPWCYVGK RLD A+   +  +       + P++ V + PYMID  T+P GE+YLAYN+RRWG D WT  ++RS +K+G +F  W  WPN+L AHRL +LA   G+G     L+    YE G N S L+ L+S+A E GLP A+   YL S +G ED+L  D RAK+ L +  VP+F
Sbjct:   11 VNIDAWSDISCPWCYVGKTRLDQAILNIQAKT-------QTPRIVVKWHPYMIDKKTRPEGEEYLAYNKRRWGSDSWTQDLRRSGAKNGLKFGNWRWWPNTLNAHRLILLAETYGRGPDAKQLLLLKTYEEGANVSKLDVLISVANELGLPGAEE--YLKSDQGTEDVLAMDSRAKSALGIHSVPHF 188          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: E1ZIP9_CHLVA (DSBA domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIP9_CHLVA)

HSP 1 Score: 174 bits (442), Expect = 3.140e-49
Identity = 86/193 (44.56%), Postives = 112/193 (58.03%), Query Frame = 3
Query:  201 VQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKAGKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVVRAAG 779
            V+V+V SD +CPWC+VGK R+D A+   E                V +  Y+ID  T P GE YLAYN RRWGGDGWT  ++RS S DG  FA WV WP+SL  H+L +LA + GKG +   L+ +  YE+G N SD+ TLV    E GL   + R +L    G   +L++D   K EL + GVPYF+V   G
Sbjct:    7 VRVDVWSDISCPWCWVGKKRMDQALAQLEQVD-----------FEVVYHAYVIDHKTDPGGEQYLAYNRRRWGGDGWTGDLRRSGSPDGATFADWVWWPSSLKGHQLLLLAQEQGKGREAKDLLLRYTYEQGENVSDIGTLVRAGRELGLDEGEVRRHLAEDRGRAAVLRDDETGKRELGISGVPYFIVGPGG 188          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: UPI001CF5FBC5 (uncharacterized protein YwbO-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF5FBC5)

HSP 1 Score: 168 bits (425), Expect = 7.800e-47
Identity = 96/246 (39.02%), Postives = 134/246 (54.47%), Query Frame = 3
Query:  201 VQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKA----GKGDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVVRAAGPXXXXXXXXXXXXXXXXXXXXXXXRPAEVVLKGAVGTDELMRAFATVSR 926
            + ++V SD +CPWCYVGK RLD A++ F+  S           + VS+ PY+ID  T   GE+Y+AYN RRWG DGWT S++R   + G EF  W  WPNSL  HRL  LAGK     G+G +   ++F+ IYE G N SD+ TL+  A+E  L  A+   YL+S +  + I   D RAK+E+ + GVPYFV+  +                         +   + L GA GT++ + AF  VS+
Sbjct:    3 INIDVYSDLSCPWCYVGKRRLDKAIQQFKTTS-----------ISVSWHPYIIDRKTASNGEEYMAYNTRRWGSDGWTHSLRREGQRLGLEFKNWKIWPNSLHGHRLVHLAGKQKGPHGQG-KAKDVLFRMIYEDGMNISDVGTLIQAAKEISLQGAEE--YLNSTDDVDLIWSEDLRAKSEMGISGVPYFVITNSAD-----------------------KRETISLSGAQGTEQFLAAFNHVSK 211          
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Match: A0A3M6TB66_POCDA (DSBA domain-containing protein n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6TB66_POCDA)

HSP 1 Score: 167 bits (422), Expect = 9.570e-46
Identity = 96/245 (39.18%), Postives = 133/245 (54.29%), Query Frame = 3
Query:  201 VQVEVTSDFACPWCYVGKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLAYNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAG--KAGKGD-QVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEEDILKNDRRAKTELNVRGVPYFVVRAAGPXXXXXXXXXXXXXXXXXXXXXXXRPAEVVLKGAVGTDELMRAFATVSR 926
            + V+V SD +CPWCYVGK RLD A++ +         AG    + V + PY+ID  T  +GEDY+AYN RRWGGDGWT S++R+  +DG  F  W TWPNSL  HRL  LAG  K  +G  +   L+ + IYE G N SD  TL+  A+E GL  A+   YL S    + +L  D  AK++L + GVPYFV+ +                              + L GA GT++ + AF+ +++
Sbjct:   55 ITVDVYSDLSCPWCYVGKRRLDKAIQQYT-------EAG----ITVHWHPYIIDKNTAEMGEDYMAYNTRRWGGDGWTRSLRRAGQQDGLGFKNWKTWPNSLHGHRLIHLAGMQKGPEGQGKAKDLLLRMIYEDGKNVSDTGTLIEAAKELGLEGAED--YLKSSSDVDLVLSQDSFAKSQLRISGVPYFVISSDNRDKKT-----------------------ISLSGAQGTEQFLAAFSHMTK 263          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig86.16202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSE3_ECTSI4.820e-10360.50DSBA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8J9S664_9CHLO1.030e-5448.95Uncharacterized protein YwbO n=1 Tax=Coccomyxa sp.... [more]
A0A1Y1IQU1_KLENI9.710e-5446.91DSBA domain-containing protein n=1 Tax=Klebsormidi... [more]
UPI0009E6346F2.280e-5241.15uncharacterized protein LOC110051917 n=1 Tax=Orbic... [more]
A0A7S3XRH4_HETAK2.390e-5239.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A388LLX2_CHABU4.380e-5248.68DSBA domain-containing protein n=1 Tax=Chara braun... [more]
A0A176WK32_MARPO4.550e-5145.99DSBA domain-containing protein n=2 Tax=Marchantia ... [more]
E1ZIP9_CHLVA3.140e-4944.56DSBA domain-containing protein n=1 Tax=Chlorella v... [more]
UPI001CF5FBC57.800e-4739.02uncharacterized protein YwbO-like n=1 Tax=Acropora... [more]
A0A3M6TB66_POCDA9.570e-4639.18DSBA domain-containing protein n=2 Tax=Pocillopori... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig86contigC-linearis_contig86:134147..136375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.2
Seed ortholog evalue1.3e-82
Seed eggNOG ortholog2880.D8LSE3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.DSBA-like thioredoxin domain
EggNOG OGs2S2Z6@2759,COG2761@1
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-21_003370.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1143
Cds size837
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig86.16202.1prot_C-linearis_contig86.16202.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig86 134355..136277 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930654.9111764-UTR-C-linearis_contig86:134146..1343541622930654.9111764-UTR-C-linearis_contig86:134146..134354Chordaria linearis ClinC8C monoicousUTRC-linearis_contig86 134147..134354 -
1690881180.1942794-UTR-C-linearis_contig86:134146..1343541690881180.1942794-UTR-C-linearis_contig86:134146..134354Chordaria linearis ClinC8C monoicousUTRC-linearis_contig86 134147..134354 -
1622930655.0062132-UTR-C-linearis_contig86:136277..1363751622930655.0062132-UTR-C-linearis_contig86:136277..136375Chordaria linearis ClinC8C monoicousUTRC-linearis_contig86 136278..136375 -
1690881180.2761488-UTR-C-linearis_contig86:136277..1363751690881180.2761488-UTR-C-linearis_contig86:136277..136375Chordaria linearis ClinC8C monoicousUTRC-linearis_contig86 136278..136375 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930654.9267032-CDS-C-linearis_contig86:134354..1347321622930654.9267032-CDS-C-linearis_contig86:134354..134732Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 134355..134732 -
1690881180.2085166-CDS-C-linearis_contig86:134354..1347321690881180.2085166-CDS-C-linearis_contig86:134354..134732Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 134355..134732 -
1622930654.9423254-CDS-C-linearis_contig86:134974..1350831622930654.9423254-CDS-C-linearis_contig86:134974..135083Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 134975..135083 -
1690881180.221544-CDS-C-linearis_contig86:134974..1350831690881180.221544-CDS-C-linearis_contig86:134974..135083Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 134975..135083 -
1622930654.9616678-CDS-C-linearis_contig86:135527..1357371622930654.9616678-CDS-C-linearis_contig86:135527..135737Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 135528..135737 -
1690881180.234809-CDS-C-linearis_contig86:135527..1357371690881180.234809-CDS-C-linearis_contig86:135527..135737Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 135528..135737 -
1622930654.9762714-CDS-C-linearis_contig86:136137..1362771622930654.9762714-CDS-C-linearis_contig86:136137..136277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 136138..136277 -
1690881180.2570503-CDS-C-linearis_contig86:136137..1362771690881180.2570503-CDS-C-linearis_contig86:136137..136277Chordaria linearis ClinC8C monoicousCDSC-linearis_contig86 136138..136277 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig86.16202.1

>prot_C-linearis_contig86.16202.1 ID=prot_C-linearis_contig86.16202.1|Name=mRNA_C-linearis_contig86.16202.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=279bp
MLWWNALLLGSLLTTCSSLIATNCRLREKLNMSTVQVEVTSDFACPWCYV
GKARLDAAVKAFEGPSNPDDTAGRAPKVHVSFSPYMIDTGTQPLGEDYLA
YNERRWGGDGWTASMKRSASKDGCEFAKWVTWPNSLLAHRLQILAGKAGK
GDQVNSLVFQTIYERGGNASDLETLVSLAEEAGLPPADARAYLHSREGEE
DILKNDRRAKTELNVRGVPYFVVRAAGPGPGGAESASASSAAAGGGGGGK
GRPAEVVLKGAVGTDELMRAFATVSRGV*
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mRNA from alignment at C-linearis_contig86:134147..136375-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig86.16202.1 ID=mRNA_C-linearis_contig86.16202.1|Name=mRNA_C-linearis_contig86.16202.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2229bp|location=Sequence derived from alignment at C-linearis_contig86:134147..136375- (Chordaria linearis ClinC8C monoicous)
TAGGATTTTAGGTCTAGAATCTGGAGAGGCGAAGGGAGTGATCCGTCGCA TGTACGCCGGTACCTGTGCCCCCCCATTGCGCAGTCGATCCACAGGTGAT GCTCTGGTGGAATGCCCTCTTGCTTGGCTCGCTGCTGACTACCTGCTCCA GCCTGATCGCGACTAATTGCAGACTCCGCGAGAAACTGAACATGTCGACC GTCCAGGTTGAAGTCACGAGCGACTTCGCCTGTCCATGGTGAGAGAGACA CGTTCAGGTGTTGGCTGGCGGTGTGAATCTGTTGGTGTGTGTGGATCGGC GACGGGTGGCGTAGAATCCCGGTCTATTCTCTGCAGCAAGAACGCCAATG GGGAACTGCTGTTGCATACGGCAGCACCTCTTCCTTTCTCTTGGAGCCCG TCTGGTGCAAGAGAAGCTTACATATCCAGTTTTTCACACAGACGAACAAA TCCCTTGCTCCCTCCCCTAGCTCCCCTCTCAATAAAAGCAGCAACAGTAG CAACTACAGGAATCCAGCCTCTCTGGACTGAGATGAGAACGCCCACATCT ATACATCTATATCTTGTCGATTGTACACATGCATCTGGCTCTGTGTGGAA AATGACCGACGCTGCTTTTCTTACAACATATGCCGCAGGTGTTACGTAGG AAAGGCGCGCCTCGACGCTGCGGTAAAGGCCTTCGAGGGGCCATCCAACC CAGATGACACGGCGGGGAGGGCTCCCAAGGTGCACGTCTCGTTCAGCCCC TACATGATCGACACGGGCACCCAGCCCCTCGGCGAGGACTACTTGGCGTA CAACGAGCGCCGGTGGGGCGGGGACGGCTGGACGGCGTCTATGAAGAGGC GAGTGATCTCATGGTTTTGTTTTTTTCGGTTTCAGTATCTAGGAGCCTTG GGTAGCCCTGTAACTTGTCATTTTTTGTTCCCTGCTGCGTTGTAAGGATT TACGGTGTGCCTGGTTCGGTGTTGCTCGTGAGGGTCAGTAATGGGTATGA AAGTTACACGCTCAGAACCAGCGCTGACCTGTGAGGGAGAAGCGAGGGGC AGAAACGACCCCACCATGCCCTCTGGCAGCAGCTGGCTGAGACTCGGTCG CGACTGCGTGGCTGGCGCTTGTCCCTCTCAAGAAGCCGAGAGCTCGTGTC CTCCTCACGATTGATTGGTCTGTCACAATCGAACGTTGTTTTCTTATTTT TCCCCGACGATTTTCCACGCGATTCCTTTTTTGCACATCAACACATACCA CTGTTGCTGAAAACACTCCAACACGAAATGAAACGCAAGCAGATCTGCCA GCAAGGACGGCTGCGAGTTTGCCAAGTGGGTGACGTGGCCCAACTCTCTC CTCGCGCACCGTCTCCAGATATTGGCCGGAAAGGCCGGCAAGGGCGACCA GGTACGTACGCTACCGTTGGCTCAATCGCACCTTGTCAGGCAGCACGTTC GAGCTCTTGACGAGTAACAAAGGCTGATAATTTCTGGTGTAACTGAACAC ACATCATCATCACTGGGAGAAGTTATACCTGTCCAGTGCATGAAGTAGCT TCCTGCTCCCCCCCCCACGGCGCCCAAACTCGTTCAAGAACCCCCCCCCC CAACCCCCACCCCCACCCTTCCGACGCGGACAAAACAACTCAGGTCAACA GCTTGGTCTTCCAGACGATCTACGAGCGCGGAGGCAACGCCTCCGATTTG GAAACCCTGGTGTCGCTGGCCGAGGAGGCCGGCCTCCCCCCGGCCGACGC TCGGGCCTACCTCCACTCTCGGGAGGGGGAGGAGGACATCCTCAAAAACG ACCGGAGGGCCAAGACGGAGCTCAACGTCAGGGGGGTGCCGTACTTCGTT GTCCGCGCCGCGGGGCCAGGGCCGGGGGGGGCGGAAAGCGCGAGCGCTTC TTCTGCGGCAGCCGGTGGCGGTGGTGGTGGAAAAGGTCGTCCAGCGGAAG TCGTCCTGAAAGGGGCCGTCGGGACCGACGAGCTAATGCGGGCGTTCGCT ACCGTTTCTCGTGGGGTATAGGGGGGCGGGGGAGGTTATAACGTTAGGCT TCAGGGCTGTTGAGCTCGAGGGCTGCTCTTGGTCGAGGATCATCGCCGTT CTTTTCAAATTTCATCGACTTTCAGCGTGCGAAATGTTGATTATTTCGAG GTCATCGTTCTTCTTTACCCGGTACCAGCATAACATTTGTTGGGCGGGGG CTCTCTCTGACAGCGATTTTGGGTGAGAG
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Coding sequence (CDS) from alignment at C-linearis_contig86:134147..136375-

>mRNA_C-linearis_contig86.16202.1 ID=mRNA_C-linearis_contig86.16202.1|Name=mRNA_C-linearis_contig86.16202.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at C-linearis_contig86:134147..136375- (Chordaria linearis ClinC8C monoicous)
ATGCTCTGGTGGAATGCCCTCTTGCTTGGCTCGCTGCTGACTACCTGCTC
CAGCCTGATCGCGACTAATTGCAGACTCCGCGAGAAACTGAACATGTCGA
CCGTCCAGGTTGAAGTCACGAGCGACTTCGCCTGTCCATGATGCTCTGGT
GGAATGCCCTCTTGCTTGGCTCGCTGCTGACTACCTGCTCCAGCCTGATC
GCGACTAATTGCAGACTCCGCGAGAAACTGAACATGTCGACCGTCCAGGT
TGAAGTCACGAGCGACTTCGCCTGTCCATGGTGTTACGTAGGAAAGGCGC
GCCTCGACGCTGCGGTAAAGGCCTTCGAGGGGCCATCCAACCCAGATGAC
ACGGCGGGGAGGGCTCCCAAGGTGCACGTCTCGTTCAGCCCCTACATGAT
CGACACGGGCACCCAGCCCCTCGGCGAGGACTACTTGGCGTACAACGAGC
GCCGGTGGGGCGGGGACGGCTGGACGGCGTCTATGAAGAGGTGTTACGTA
GGAAAGGCGCGCCTCGACGCTGCGGTAAAGGCCTTCGAGGGGCCATCCAA
CCCAGATGACACGGCGGGGAGGGCTCCCAAGGTGCACGTCTCGTTCAGCC
CCTACATGATCGACACGGGCACCCAGCCCCTCGGCGAGGACTACTTGGCG
TACAACGAGCGCCGGTGGGGCGGGGACGGCTGGACGGCGTCTATGAAGAG
ATCTGCCAGCAAGGACGGCTGCGAGTTTGCCAAGTGGGTGACGTGGCCCA
ACTCTCTCCTCGCGCACCGTCTCCAGATATTGGCCGGAAAGGCCGGCAAG
GGCGACCAGATCTGCCAGCAAGGACGGCTGCGAGTTTGCCAAGTGGGTGA
CGTGGCCCAACTCTCTCCTCGCGCACCGTCTCCAGATATTGGCCGGAAAG
GCCGGCAAGGGCGACCAGGTCAACAGCTTGGTCTTCCAGACGATCTACGA
GCGCGGAGGCAACGCCTCCGATTTGGAAACCCTGGTGTCGCTGGCCGAGG
AGGCCGGCCTCCCCCCGGCCGACGCTCGGGCCTACCTCCACTCTCGGGAG
GGGGAGGAGGACATCCTCAAAAACGACCGGAGGGCCAAGACGGAGCTCAA
CGTCAGGGGGGTGCCGTACTTCGTTGTCCGCGCCGCGGGGCCAGGGCCGG
GGGGGGCGGAAAGCGCGAGCGCTTCTTCTGCGGCAGCCGGTGGCGGTGGT
GGTGGAAAAGGTCGTCCAGCGGAAGTCGTCCTGAAAGGGGCCGTCGGGAC
CGACGAGCTAATGCGGGCGTTCGCTACCGTTTCTCGTGGGGTATAGGTCA
ACAGCTTGGTCTTCCAGACGATCTACGAGCGCGGAGGCAACGCCTCCGAT
TTGGAAACCCTGGTGTCGCTGGCCGAGGAGGCCGGCCTCCCCCCGGCCGA
CGCTCGGGCCTACCTCCACTCTCGGGAGGGGGAGGAGGACATCCTCAAAA
ACGACCGGAGGGCCAAGACGGAGCTCAACGTCAGGGGGGTGCCGTACTTC
GTTGTCCGCGCCGCGGGGCCAGGGCCGGGGGGGGCGGAAAGCGCGAGCGC
TTCTTCTGCGGCAGCCGGTGGCGGTGGTGGTGGAAAAGGTCGTCCAGCGG
AAGTCGTCCTGAAAGGGGCCGTCGGGACCGACGAGCTAATGCGGGCGTTC
GCTACCGTTTCTCGTGGGGTATAG
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