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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 722 |
| Cds size | 720 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622930649.247362-CDS-C-linearis_contig86:123704..123937 | 1622930649.247362-CDS-C-linearis_contig86:123704..123937 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig86 123705..123937 - |
| 1690881178.0997834-CDS-C-linearis_contig86:123704..123937 | 1690881178.0997834-CDS-C-linearis_contig86:123704..123937 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig86 123705..123937 - |
| 1622930649.29871-CDS-C-linearis_contig86:123968..124430 | 1622930649.29871-CDS-C-linearis_contig86:123968..124430 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig86 123969..124430 - |
| 1690881178.1134706-CDS-C-linearis_contig86:123968..124430 | 1690881178.1134706-CDS-C-linearis_contig86:123968..124430 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig86 123969..124430 - |
| 1622930649.3235238-CDS-C-linearis_contig86:125097..125122 | 1622930649.3235238-CDS-C-linearis_contig86:125097..125122 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig86 125098..125122 - |
| 1690881178.1307304-CDS-C-linearis_contig86:125097..125122 | 1690881178.1307304-CDS-C-linearis_contig86:125097..125122 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig86 125098..125122 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig86.16199.1 >prot_C-linearis_contig86.16199.1 ID=prot_C-linearis_contig86.16199.1|Name=mRNA_C-linearis_contig86.16199.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=240bp
ERHHQRCKATFQAQPPSVQDLWRRKRAAVKNTNITLGGASNSTHTAWLPI
SRRLALPLECSAALQGELRISEMAFVSVLGTTSAAAVHFQGGLTNTWPQQ
QHRPQPQQRPQRRLLSFTPPLAGSYDALAAAARQPQAHTGSGFLNTSFTR
RNSSSSSSSSSSEAEGTLTAAPSHHHHHHPLLRAMARSGVGRGGPRRPRP
RPRDWRHIAAPVAPRRRAAAEWARDSTGRPGAAGGAGGTA back to topmRNA from alignment at C-linearis_contig86:123703..125122- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig86.16199.1 ID=mRNA_C-linearis_contig86.16199.1|Name=mRNA_C-linearis_contig86.16199.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1420bp|location=Sequence derived from alignment at C-linearis_contig86:123703..125122- (Chordaria linearis ClinC8C monoicous)
GAGCGCCATCATCAACGCTGCAAAGGTGTGTGGCATGTCACTTGCTGTGC
TTTGAGCTTCGTTGGGCGATTGCTTCTGGGATCGTTGTACTGGCTACGTT
CGCCTTATAGTCATGTTGCGCCGGTTTGCGGCCAGCGTGGGTGCGCTCAT
GAAAGAAGCTGTCTGCACCCAACACTACGCCAGCAGCAGCTGGCTGGTTG
CTGGCTGCTGCAGGCCGAGTTGAAACGTTCATGCCATTCCACTTTTCCTG
TGCTGCCTCAAGTTGTGCCTCCCAAGGTTGGTGGTGGAAGTTAGCCGTTT
TTTAGGCATCATTGCCAACGACCCGTTCAACATGAACTTAGGTTTTTGCA
CACACTACCACAGCAGTAGAGTAGCGAATCTATACCCGTGGTGGTAGTCG
AGAGGGCGGTTGATGGTACAACCGCTGCGAGCTAGCTGTATCCGTCCCGA
CTTGCCTCGGGGCCCTCCCTCTCTTTCTTAGGTTGCCTGCAAATTCATCG
AAAAGACACACCCTCAGGCTGCGTCTGTCCGCTGTGTGAATGTAGACTAT
CCACGGCAGCGCCCGCGAGCGGGTACATAAGTACATATACAGGCAAAGAA
ACAAACTTGATGTTGTAGCATCGCACTAACGTTGTACACTACACCAACTG
CAACTACCTCGTGAATTCCCATGCCTTGCATTCAAACCCAAGCGACATTT
CAGGCCCAACCACCTTCAGTACAGGACCTGTGGCGACGGAAAAGGGCAGC
AGTGAAAAACACAAACATCACTTTGGGAGGAGCCAGCAATAGCACACACA
CAGCTTGGCTCCCTATAAGCAGGCGTTTGGCACTTCCTCTTGAGTGCAGC
GCGGCGCTACAAGGGGAGTTACGCATCAGCGAGATGGCGTTTGTCTCCGT
TCTCGGGACGACCTCTGCGGCAGCAGTCCACTTCCAAGGTGGATTGACAA
ACACCTGGCCACAGCAGCAGCACCGCCCCCAACCACAACAGCGGCCGCAG
CGACGGTTACTATCTTTCACCCCTCCCCTCGCCGGGTCTTACGATGCCCT
GGCGGCGGCAGCACGGCAACCGCAAGCACACACGGGCAGCGGCTTTCTCA
ATACCAGTTTTACCCGCAGGAACAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCGGCAGCAGCGGCAGCAGCGGCAACATCAACAGAAGCAGAAGGCACCC
TCACTGCGGCGCCCAGCCACCACCACCACCACCACCCGCTTCTTCGAGCA
ATGGCGCGTTCAGGAGTAGGCCGAGGGGGCCCCCGACGGCCTCGGCCTCG
GCCTCGAGATTGGAGGCACATCGCAGCGCCAGTAGCACCACGGAGGCGAG
CGGCGGCAGAGTGGGCACGAGATTCAACAGGTCGGCCGGGGGCCGCGGGA
GGGGCGGGAGGCACGGCAGC back to topCoding sequence (CDS) from alignment at C-linearis_contig86:123703..125122- >mRNA_C-linearis_contig86.16199.1 ID=mRNA_C-linearis_contig86.16199.1|Name=mRNA_C-linearis_contig86.16199.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at C-linearis_contig86:123703..125122- (Chordaria linearis ClinC8C monoicous)
GAGCGCCATCATCAACGCTGCAAAGGAGCGCCATCATCAACGCTGCAAAG
CGACATTTCAGGCCCAACCACCTTCAGTACAGGACCTGTGGCGACGGAAA
AGGGCAGCAGTGAAAAACACAAACATCACTTTGGGAGGAGCCAGCAATAG
CACACACACAGCTTGGCTCCCTATAAGCAGGCGTTTGGCACTTCCTCTTG
AGTGCAGCGCGGCGCTACAAGGGGAGTTACGCATCAGCGAGATGGCGTTT
GTCTCCGTTCTCGGGACGACCTCTGCGGCAGCAGTCCACTTCCAAGGTGG
ATTGACAAACACCTGGCCACAGCAGCAGCACCGCCCCCAACCACAACAGC
GGCCGCAGCGACGGTTACTATCTTTCACCCCTCCCCTCGCCGGGTCTTAC
GATGCCCTGGCGGCGGCAGCACGGCAACCGCAAGCACACACGGGCAGCGG
CTTTCTCAATACCAGTTTTACCCGCAGGAACAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCGCGACATTTCAGGCCCAACCACCTTCAGTACAGGACCTG
TGGCGACGGAAAAGGGCAGCAGTGAAAAACACAAACATCACTTTGGGAGG
AGCCAGCAATAGCACACACACAGCTTGGCTCCCTATAAGCAGGCGTTTGG
CACTTCCTCTTGAGTGCAGCGCGGCGCTACAAGGGGAGTTACGCATCAGC
GAGATGGCGTTTGTCTCCGTTCTCGGGACGACCTCTGCGGCAGCAGTCCA
CTTCCAAGGTGGATTGACAAACACCTGGCCACAGCAGCAGCACCGCCCCC
AACCACAACAGCGGCCGCAGCGACGGTTACTATCTTTCACCCCTCCCCTC
GCCGGGTCTTACGATGCCCTGGCGGCGGCAGCACGGCAACCGCAAGCACA
CACGGGCAGCGGCTTTCTCAATACCAGTTTTACCCGCAGGAACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCGAAGCAGAAGGCACCCTCACTGCGGCG
CCCAGCCACCACCACCACCACCACCCGCTTCTTCGAGCAATGGCGCGTTC
AGGAGTAGGCCGAGGGGGCCCCCGACGGCCTCGGCCTCGGCCTCGAGATT
GGAGGCACATCGCAGCGCCAGTAGCACCACGGAGGCGAGCGGCGGCAGAG
TGGGCACGAGATTCAACAGGTCGGCCGGGGGCCGCGGGAGGGGCGGGAGG
CACGGCAAAGCAGAAGGCACCCTCACTGCGGCGCCCAGCCACCACCACCA
CCACCACCCGCTTCTTCGAGCAATGGCGCGTTCAGGAGTAGGCCGAGGGG
GCCCCCGACGGCCTCGGCCTCGGCCTCGAGATTGGAGGCACATCGCAGCG
CCAGTAGCACCACGGAGGCGAGCGGCGGCAGAGTGGGCACGAGATTCAAC
AGGTCGGCCGGGGGCCGCGGGAGGGGCGGGAGGCACGGCA back to top
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