mRNA_C-linearis_contig85.16168.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: D7G8X8_ECTSI (GYF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X8_ECTSI) HSP 1 Score: 362 bits (929), Expect = 5.050e-116 Identity = 326/431 (75.64%), Postives = 342/431 (79.35%), Query Frame = 1
Query: 301 DVDRMVEEVHGEEEVDEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIGAASTRAPKASDGESAXXXXXXXXXXXAAAAGANPLSLMGTAEMRVALIPLVLEDETVVQALRRLGGKKQSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEXXXXXXXXXXXXXXX---EKKRREDFARLTELADALLQAGQHDVYQQTKEELEXXXXXXXXXXXXXXASNSGVEEKAYFEYRGKDGNVHGPYGASQMRGWAQQGYFDGDQAVMMRRV-PAEGKANDATNGGAAXXXXXXXXXAEGSTAKDPPS-NADLMADLDXXXXXXXXXXXXXXXXXXXXXXXXGEK------GAESESGEWTLSDNIDWSAF 1560
DVDRMVE+VHGEEE DEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQE+GERDAWLAEMDE MEEAIGAASTRAPK S+G + A LS+MGTAEMR ALIPL+LEDETVVQALRRLG KKQS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX EKKRREDFARLTELADALLQAGQHDVYQQTKE+LE XXXXXXX A++ EE AYFEYRGKDGNVHGPYGASQMRGWAQQGYFDG+QAVMMRRV P G+A +TNGG + AEG+ AKDPPS NADLMADL XXXXXXXXXXXXXXXXXXXXXX G S EW LSDNIDW++F
Sbjct: 118 DVDRMVEKVHGEEEXDEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEDGERDAWLAEMDEEAMEEAIGAASTRAPKPSEGAAGATGAAGGAVAPLGGGAAESLSVMGTAEMREALIPLLLEDETVVQALRRLGAKKQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGSPAGARSTAVEKKRREDFARLTELADALLQAGQHDVYQQTKEDLEEAAEVAXXXXXXXAATSGAGEESAYFEYRGKDGNVHGPYGASQMRGWAQQGYFDGEQAVMMRRVQPKNGEATTSTNGGTSKQ-------AEGTPAKDPPSSNADLMADLHDDXXXXXXXXXXXXXXXXXXXXXXXXXXASRGPGKTSSQEEWVLSDNIDWTSF 541
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A6H5JI10_9PHAE (GYF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI10_9PHAE) HSP 1 Score: 313 bits (802), Expect = 9.930e-97 Identity = 314/470 (66.81%), Postives = 333/470 (70.85%), Query Frame = 1
Query: 301 DVDRMVEEVHGEEEVDEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIGAASTRAPKASDGESAXXXXXXXXXXXAAAAGANPLSLMGTAEMRVALIPLVLEDETVVQALRRLGGKKQSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEXXXXXXXXXXXXXXXEKKRREDFARLTELADALLQAGQHDVYQQTKEELEXXXXXXXXXXXXXXASNSGV------------------------------------------EEKAYFEYRGKDGNVHGPYGASQMRGWAQQ---GYFDGDQAVMMRRVPAE-GKANDATNGGAAXXXXXXXXXAEGSTAKDPP-SNADLMADLDXXXXXXXXXXXXXXXXXXXXXXXX---GEKGAESESGEWTLSDNIDWSAF 1560
DVDRMVE+VHGEEE DEHYERTNEAGDPIEPFNLRNERDMGY+DTNGNFVWKQE ERDAWLAEMDE MEEAIGAASTRAPK S+G + XXXXXX A LS+MGTAEMR ALIPL+LEDETVVQALRRLG KKQS +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXX EDFARLTELADALLQAGQHDVYQQTKE+LE XXXXXXXXX EE AYFEYRGKDGNVHGPYGASQMRGWAQQ GYFDG+QAVMMRRV ++ G+A +TNGG + AEG+ A+D P SNADL+ADLD XXX G G S EW LSDNIDW++F
Sbjct: 107 DVDRMVEKVHGEEEEDEHYERTNEAGDPIEPFNLRNERDMGYYDTNGNFVWKQENDERDAWLAEMDEEAMEEAIGAASTRAPKPSEGATXXXXXXXGAVAPLGGGAAESLSVMGTAEMREALIPLLLEDETVVQALRRLGVKKQSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XEDFARLTELADALLQAGQHDVYQQTKEDLEEAAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESAYFEYRGKDGNVHGPYGASQMRGWAQQASMGYFDGEQAVMMRRVQSKNGEAIASTNGGTSKQ-------AEGTPAQDAPTSNADLLADLDDDEEVEEKDKKEGKGEPAASXXXGDASGGTGKISSQEEWVLSDNIDWTSF 568
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A836CCE7_9STRA (GYF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCE7_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.130e-14 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 367 NEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIGAA 531
NEAG+ +EPFNL+NER GYFDTNGNFVWK ++ E DAWLA +D+ MEEAIG A
Sbjct: 27 NEAGEVLEPFNLKNERQEGYFDTNGNFVWKMQDQETDAWLAGLDDAAMEEAIGQA 81
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A4D9CQJ9_9STRA (GYF domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQJ9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.050e-13 Identity = 57/140 (40.71%), Postives = 76/140 (54.29%), Query Frame = 1
Query: 304 VDRMVEEVHGEEEVDEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMD-EGTMEEAIGAASTRAPKASDGESAXXXXXXXXXXXAAAAGANPLSLMGTAEMRVALIPLVLEDETVVQALRRLG 720
V RM ++ EEE E E NEAGD +EPFNL+NER G+FD GNFVWK+EEG DAWLA ++ E +E IG A+ K D + A G P + ++ L+ + ETV++AL+RLG
Sbjct: 39 VRRMTKQFAWEEERME--EEFNEAGDKMEPFNLKNERTEGFFDETGNFVWKKEEGGEDAWLASLENEEDLEARIGEAAVARKKKDDED---------------AEGEEPPEFVDQWALKERLLMFMRPGETVLRALKRLG 161
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A7S4EB88_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EB88_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 4.440e-13 Identity = 59/139 (42.45%), Postives = 76/139 (54.68%), Query Frame = 1
Query: 313 MVEEVHGEEEVDEHYERTNEAGDPIEPFNLRNER-DMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIGAASTRAPKA--SDGESAXXXXXXXXXXXAAAAGANPLSLMGTAEMRVALIPLVLEDETVVQALRRLG 720
M +E+ GEE ++ ER NE G+ IEPFNLR ER + G+FD NGNFVWK+ + E DAWLA MDE E A+G A R+ K SDG+ +E+ V LI L+ ETV A+RR+G
Sbjct: 85 MKDEIEGEE--NDTGERYNEVGERIEPFNLRAERANDGFFDANGNFVWKRGDAEPDAWLASMDEAAEEAAVGEALARSTKMEESDGDEEPSREP--------------------SELIVELIQLLEPGETVAAAVRRVG 201
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A812X5W5_SYMMI (Cd2bp2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X5W5_SYMMI) HSP 1 Score: 80.9 bits (198), Expect = 4.920e-13 Identity = 41/72 (56.94%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 319 EEVHGEEEVDEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIGAAS 534
EEV GEE D+ E+ N+AG+ +EPFNLR+ER+ G+FD N N+VW+++ GE D+WLA+MDE TME++IG A+
Sbjct: 24 EEVDGEE--DDGKEKFNDAGEVMEPFNLRDEREGGHFDENMNYVWQKDHGEVDSWLADMDEATMEKSIGEAA 93
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A482SSZ3_9ARCH (GYF domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSZ3_9ARCH) HSP 1 Score: 75.9 bits (185), Expect = 3.000e-11 Identity = 75/301 (24.92%), Postives = 108/301 (35.88%), Query Frame = 1
Query: 385 IEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIGAASTRAPKASDGESAXXXXXXXXXXXAAAAGANPLSLMGTAEMRVALIPLVLEDETVVQALRRLGGKKQSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEXXXXXXXXXXXXXXXEKKRREDFARLTELADALLQAGQHDVYQQTKEELEXXXXXXXXXXXXXXASNSGVEEKAYFEYRGKDGNVHGPYGASQMRGWAQQGYFDGDQAVMMRRV 1287
+EPFNL+NER+ G+FD N N+V+K+E GE DAW+A + E ME AIG A+ K A A + P + E++ L+ ++ ETV +RRL GK E K+ R R+TE++D LL +G V + T+E L +EY+G D V+GPY + ++ GW QGY G AV+MR+
Sbjct: 1 MEPFNLKNEREGGFFDENMNYVFKKEVGEMDAWVAGLSEAEMEAAIGEAALAEKK----------RLALRARKEAEADSRPH--LTPLELKHELLAIMQRGETVSATMRRLSGKLGKGVAGVVFVQLMSEHFQFSIFYIFQFFFVDTKLGIKRRRPD-----------------------------EQKLSAAEQRKQQAVTAKQNRPILERVTEISDLLLSSGLSGVLEMTREALHASTIS--------------------WEYKGADDIVYGPYSSQEIAGWKGQGYLTGPTAVLMRQA 240
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A7S3YEZ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEZ5_HETAK) HSP 1 Score: 73.2 bits (178), Expect = 4.580e-11 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 337 EEVDEHYERTNEAGDPIEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIGAAS 534
E+ DE R N+AG+ +E FNL+++R GYFD +GNFVWK +E E DAWLA MDE ME AIG A+
Sbjct: 113 EQKDEEGIRYNDAGEILESFNLKSDRQDGYFDASGNFVWKLQEKEPDAWLAGMDEHEMESAIGQAA 178
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: A0A7S3M4V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M4V8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.400e-10 Identity = 49/118 (41.53%), Postives = 66/118 (55.93%), Query Frame = 1
Query: 376 GDPIEPFNLRNERDMGYFDTNGNFVWKQEEGERDAWLAEMDEGTMEEAIG-AASTRAPKASDGESAXXXXXXXXXXXAAAAGANPLSLMGTAEMRVALIPLVLEDETVVQALRRLGGK 726
G+ IE FNL +ER+ G+FD N N+V+K+E+GE DAW+AEMDE ME+AIG AA KA++ E A +++ LI L+ ETV A+RRL GK
Sbjct: 1 GEVIEAFNLADEREGGHFDENMNYVFKKEKGEVDAWVAEMDEVAMEQAIGEAAKAVKRKAAEREEQDRRDAMREFKTAI-------------QLKKELIALMQPKETVAGAMRRLSGK 105
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Match: K3WYW2_GLOUD (GYF domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYW2_GLOUD) HSP 1 Score: 67.4 bits (163), Expect = 1.650e-8 Identity = 96/347 (27.67%), Postives = 134/347 (38.62%), Query Frame = 1
Query: 355 YERTNEAGDP---IEPFNLRNERDMGYFDTNGNFVWKQEEG--ERDAWLAEMDEGTMEEAIGAA----STRAPKASDGESAXXXXXXXXXXXAAAAGANPLSLMGTAEMRVALIPLVLEDETVVQALRRLGGKKQSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKEXXXXXXXXXXXXXXXEKKRREDFARLTELADALLQAGQHDVYQQTKEEL---------------EXXXXXXXXXXXXXXASNSGVEEKA------------YFEYRGKDGNVHGPYGASQMRGWAQQGYFDGDQAVMMRRV 1287
Y++++E G + FN+ +E D G+FD GNFVW +E+ + +AWL +G EE IGAA + R + G + M L L+ ETV+QAL+RLG K++ A K E+K + F ++TE AD L++ G+ DVY Q KEE XXXXXXXXXXXX A+++ EE+ +EYRG DG +HGP+ +S W QQGYF GD AV +R+V
Sbjct: 17 YKKSDEEGGESYGVTAFNMNDENDEGHFDDAGNFVWNKEDTRVQEEAWL----DGVSEEQIGAALHAKNRREYRDEQG----------------------VETMTGERANSVLASLLNSRETVLQALQRLGSKRKKARGI----------------------------------------------------------------KRKQQTAEEDATPKQTPEQKAQ--FEQITEAADFLMRQGEVDVYSQIKEEFMAEDDVVTFSQXXXXXXXXXXXXXXXXXTFATSAETEEEGKSEERPPQKPETMWEYRGADGEIHGPFPSSSFIAWQQQGYFTGDNAVDIRQV 271 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig85.16168.1 >prot_C-linearis_contig85.16168.1 ID=prot_C-linearis_contig85.16168.1|Name=mRNA_C-linearis_contig85.16168.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=521bp MSTKRKASDGGASGNSVSGNGSKRKVRFRKQDDSEGDSDNNDSRRPPPRRback to top mRNA from alignment at C-linearis_contig85:415064..423288+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig85.16168.1 ID=mRNA_C-linearis_contig85.16168.1|Name=mRNA_C-linearis_contig85.16168.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8225bp|location=Sequence derived from alignment at C-linearis_contig85:415064..423288+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig85:415064..423288+ >mRNA_C-linearis_contig85.16168.1 ID=mRNA_C-linearis_contig85.16168.1|Name=mRNA_C-linearis_contig85.16168.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3126bp|location=Sequence derived from alignment at C-linearis_contig85:415064..423288+ (Chordaria linearis ClinC8C monoicous)back to top |