mRNA_C-linearis_contig85.16154.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig85.16154.1
Unique NamemRNA_C-linearis_contig85.16154.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: D7FL91_ECTSI (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL91_ECTSI)

HSP 1 Score: 1110 bits (2870), Expect = 0.000e+0
Identity = 541/582 (92.96%), Postives = 562/582 (96.56%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKRRHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLSTEEPLTGSDCEAIIPLYMKKGADFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSKTGDFAQWYNPVWRNIKEHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPGKIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFEIGVEGAKKATGFANATEA 1796
            MCGILGIFGS +SE +LRSKLIECSK LRHRGPDWSGYEI++VSEKR+HGIGHERLSIIDPESGAQPLFSRDGQV+LSANGEIYNY ELLS EEPLTGSDCE+IIPLYMKKG DFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKA+V GCRSLR+FPPGHSYSSKTGDF QWYNPVWR +KEHPT+RVDLARLRE+FT AVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDS  FSAFPRIHSFSVGL GSPD+KAAKEVADFLGTVHHSY+YTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADE  LLGGYLYFHKAP+ QEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKM++PGKIEK IMRKAFDTP+DVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTP AAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFE+G +GAKKATG A+ATEA
Sbjct:    1 MCGILGIFGSELSEKDLRSKLIECSKMLRHRGPDWSGYEIISVSEKRKHGIGHERLSIIDPESGAQPLFSRDGQVILSANGEIYNYQELLSDEEPLTGSDCESIIPLYMKKGTDFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKALVQGCRSLRAFPPGHSYSSKTGDFTQWYNPVWRTLKEHPTQRVDLARLRESFTTAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSGRFSAFPRIHSFSVGLAGSPDIKAAKEVADFLGTVHHSYVYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADE--LLGGYLYFHKAPNGQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMVAPGKIEKYIMRKAFDTPEDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPAAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFEVGADGAKKATGVAHATEA 580          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A835Z2W5_9STRA (Asparagine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2W5_9STRA)

HSP 1 Score: 833 bits (2151), Expect = 4.030e-294
Identity = 413/570 (72.46%), Postives = 465/570 (81.58%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKRRHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLS----TEEPLTGSDCEAIIPLYMKKGADFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSKTGDFAQWYNPVWRNIKEHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMI--SPGKIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFE 1742
            MCGIL IF S + E  LRSKLI+C++ LRHRGPDWSGY IV      +HGI HERL+IIDPESGAQPL S DG VML+ NGEIYN+ EL      +  P TGSDCEAIIPLY ++G DF+NDLRGMFAF IYD +  +FF  RDHVGI+PLYIGWGDDGSVWI+SEMKA+   CR  R FPP H +SS T +F +WYNP WR +   PT+  DL  LR  FTKAVVRRMM+DVPWGVLLSGGLDSSLVASVA RH R +P+S     FPRIHSFSVG+EGSPDLKAAKEVADFLGTVHHSY YT+QEGLDAIREVV  +ETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADE  + GGYLYFHKAP+AQEFFEETRDKV ALHQFDC RANKST++WGVE RVPFLD DF+E +M  +P +KMI  + G++EK I+RKAFDTPDD YLP HIL+RQKEQFSDGVGY WID LR  AA  V+D+ F HRANRFP +PPA+KEAYLYR IFEEF+PT  AAETVP G SIACSTARA+EWDESFK RADCSGR++GGVH+ AY + F+
Sbjct:    1 MCGILAIFNSQLPEAELRSKLIQCAQRLRHRGPDWSGYRIVGNG---KHGIAHERLAIIDPESGAQPLTSHDGTVMLAVNGEIYNFKELYQNLHKSYTPKTGSDCEAIIPLYEQRGMDFINDLRGMFAFVIYDAKTGAFFAVRDHVGIVPLYIGWGDDGSVWIASEMKALAVECRRFRPFPPAHYWSSTTKEFTRWYNPGWRTLTGMPTQPCDLTALRNAFTKAVVRRMMSDVPWGVLLSGGLDSSLVASVASRHARRNPNSP----FPRIHSFSVGIEGSPDLKAAKEVADFLGTVHHSYQYTIQEGLDAIREVVYHLETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADE--IFGGYLYFHKAPNAQEFFEETRDKVQALHQFDCLRANKSTSAWGVEPRVPFLDADFLELSMNIDPSEKMIHKAEGRMEKYIIRKAFDTPDDPYLPDHILWRQKEQFSDGVGYGWIDALRDNAAAHVSDDMFNHRANRFPHNPPASKEAYLYRSIFEEFYPTQAAAETVPGGPSIACSTARAIEWDESFKGRADCSGRSVGGVHNMAYDETFK 561          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: B8BZR9_THAPS (Asparagine synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZR9_THAPS)

HSP 1 Score: 709 bits (1831), Expect = 2.660e-245
Identity = 354/580 (61.03%), Postives = 431/580 (74.31%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKR----RHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELL----STEEPLTGSDCEAIIPLYMKKGA--DFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSK---TGDFAQWYNPVWRNIK----EHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPGKIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEF 1739
            MCGI  IF S + ET LR+ LI+CS +LRHRGPDWSGY +V           HGI HERL+I+DPESG+QPL SRDG V+++ANGEIYNY EL     S   P TGSDCE I+PL+ + GA  +  N LRGMF+F +YDK  D+FF+ RDH+G  PLYIGWG+DGSV++ SEMK++V  C   ++FPPG  Y++K    G F +WY P W          P  R     LR  F KAV RRMM+DVPWGVLLSGGLDSSLVAS+  R+V     ++  S+FP++HSF+VGLEGSPDLKAAK+VADFLGT+HH+Y YT++EG DAIREV++ +ETYD TTIRASTPM+LMSRKIKAMG+KMVLSGEGADE  + GGYLYFHKAP+ QEFF+ET DK+  LH +DC R NK+ ++WGVE R PFLD DF++ AM  +P++KMI   +IEK ++RKAFDTPDD YLP  IL+RQKEQFSDGVGY W+D L+A A +EVTD+ F   ANR+P + P TKE Y YR IFEEFFP  +A +TVP GKSIACST RA+ WD +F  RAD SGRA G VHD AYG +F
Sbjct:    1 MCGIFAIFSSSLDETELRNHLIKCSSSLRHRGPDWSGYIVVKSDPSAGIPLNHGIAHERLAIMDPESGSQPLVSRDGNVIVAANGEIYNYKELFKALTSPYTPATGSDCEVILPLWAEFGASIELPNKLRGMFSFILYDKSSDTFFICRDHIGKTPLYIGWGNDGSVYVGSEMKSIVGECSKFQNFPPGCCYTNKGPNAGKFMRWYQPNWAPEMLPGLAPPKDRFQADVLRHAFEKAVTRRMMSDVPWGVLLSGGLDSSLVASICARNV-----ARRSSSFPKLHSFTVGLEGSPDLKAAKQVADFLGTIHHAYTYTIEEGADAIREVIKSVETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGADE--VFGGYLYFHKAPNEQEFFDETVDKISRLHMYDCLRCNKAMSAWGVEPRTPFLDADFLQVAMNMDPKEKMIEDTRIEKYVIRKAFDTPDDPYLPAEILWRQKEQFSDGVGYGWVDHLKAVADKEVTDQMFASAANRYPHNTPTTKEGYRYRMIFEEFFPGESAEKTVPGGKSIACSTERAMNWDATFATRADPSGRAAG-VHDSAYGGDF 572          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A7S2YB47_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YB47_9STRA)

HSP 1 Score: 708 bits (1827), Expect = 1.370e-244
Identity = 354/589 (60.10%), Postives = 430/589 (73.01%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEK----RRHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLST----EEPLTGSDCEAIIPLYMKKGA--DFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSK---TGDFAQWYNPVWRNIK----EHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPG--------KIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFE 1742
            MCGI  IF S + E +LR +LI CS  LRHRGPDWSGY+++           HGIGHERL+IIDPESG+QPL S D  V+L+ANGEIYNY +L ST     +P TGSDCE I+PLY + GA  D    LRGMF+F +YD+R+DSF VARDH+GI PLYIGWG+DGS+++SSEMK+M+  C   + FPPGH Y SK    G F +W+ P W        + PT+  D  RLR  F KAV+RRMM+DVPWGVLLSGGLDSSLVA++  RH+      +  +AFP++HSF++GL  SPDL AAK+VAD LGT+HH+Y YT++EG DAIR+V+R +ETYD TTIRASTPM+LMSRKIKAMG+KMVLSGEGADE  + GGYLYFHKAP+AQE F+ET DK+  LH +DC R NK+ ++WGVE RVPFLD DF++ AM  +P++KMI  G        KIEK  MRKAFDTPDD YLP  +L+RQKEQFSDGVGY W+D L+  A  E++D+ F   ANRFP + P TKE Y YR IFEE FP   A +TVP GK+IACST RA+ WD+SF  RAD SGRA G VHD AY   FE
Sbjct:    1 MCGIFAIFASSLPEVDLRRELIACSAKLRHRGPDWSGYKVIEADPSMGIPNTHGIGHERLAIIDPESGSQPLVSPDSSVILAANGEIYNYKDLYSTLTVDYKPKTGSDCEVILPLYEQFGATIDLPRQLRGMFSFILYDRRNDSFVVARDHIGITPLYIGWGNDGSIYVSSEMKSMIGECTKFQQFPPGHLYCSKGPHAGKFQRWFTPSWAPEMLPGIQMPTQPYDAERLRNAFEKAVIRRMMSDVPWGVLLSGGLDSSLVAAICARHI-----GRRTTAFPKLHSFTIGLANSPDLLAAKKVADHLGTIHHAYTYTIEEGADAIRDVIRSVETYDVTTIRASTPMYLMSRKIKAMGIKMVLSGEGADE--VFGGYLYFHKAPNAQELFDETVDKISRLHMYDCLRCNKAMSAWGVEPRVPFLDADFMDVAMELDPQEKMIIKGPDVSKADTKIEKWAMRKAFDTPDDPYLPHEVLWRQKEQFSDGVGYGWVDHLKDVAENEISDQMFAQAANRFPHNTPTTKEGYRYRMIFEELFPGEAAEKTVPGGKTIACSTERAMNWDKSFATRADPSGRAAG-VHDSAYDATFE 581          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A7S3Q388_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q388_9STRA)

HSP 1 Score: 704 bits (1818), Expect = 3.750e-243
Identity = 357/594 (60.10%), Postives = 433/594 (72.90%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKR----RHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLST----EEPLTGSDCEAIIPLYMKKGA--DFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSK---TGDFAQWYNPVWR-----NIKEHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPG--------KIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFEIGVE 1754
            MCGI  IFGS +S+ +LR +LI CS  +RHRGPDWSGY +V+  E       HGI HERL+I+DPESG QPL S DG V+++ANGEIYNY +L S      +P TGSDCE I+PLY ++GA  DF   LRGMF+F +YDK  DSFF+ RDH+GI PLYIGW +DGSV++SSEMKA+V  C   ++FPPGH +++K      F +WY P W       +K  PT       LR  F KAVVRRMM+DVPWGVLLSGGLDSSLVAS+  RH++    S     FP++HSF++GLE SPD+ AAK+VAD+LGT HH+Y YT+ EG D++REV+R +ETYD TTIRASTPM+LMSRKIKAMG+KMVLSGEGADE  + GGYLYFHKAP+AQEF++ET DK+  LH +DC R NK+ ++WGVE RVPFLD DF+E AM   PE+KMI  G        +IEK  +RKAFDTPDD YLPQ IL+RQKEQFSDGVGY W+D L+A A +EV+D+ F + ANRFP + P TKE Y YR IFEE FP   A +TVP GKSIACST RA+ WD+SF  RAD SGRA G VHD AY  +F    E
Sbjct:    1 MCGIFAIFGSSLSDDDLRKQLITCSTKIRHRGPDWSGYIVVSKDEAAGIPMNHGIAHERLAIMDPESGEQPLVSADGDVIVAANGEIYNYKDLYSELKEPYKPKTGSDCEVILPLYKEQGAGIDFPKRLRGMFSFILYDKAKDSFFICRDHIGITPLYIGWANDGSVYVSSEMKAIVGQCNKFQNFPPGHIFTNKGPNANQFTRWYEPSWAPKLLPGLKP-PTVPYQPDMLRTAFEKAVVRRMMSDVPWGVLLSGGLDSSLVASICSRHIKRRSTS-----FPKLHSFTIGLENSPDILAAKKVADYLGTTHHAYTYTLDEGADSVREVIRSLETYDLTTIRASTPMYLMSRKIKAMGIKMVLSGEGADE--VFGGYLYFHKAPNAQEFYDETVDKISRLHMYDCLRCNKAMSAWGVEPRVPFLDADFLETAMNLAPEEKMIKKGEGISAADTRIEKWAIRKAFDTPDDPYLPQEILWRQKEQFSDGVGYGWVDHLKAIAEKEVSDQMFGNAANRFPHNTPTTKEGYRYRMIFEECFPGEAAEKTVPGGKSIACSTERAMNWDKSFAGRADPSGRAAG-VHDSAYDQKFVAATE 585          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A7S1TW89_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW89_9STRA)

HSP 1 Score: 702 bits (1811), Expect = 2.100e-242
Identity = 358/576 (62.15%), Postives = 419/576 (72.74%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKRRHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLSTEE-------PLTGSDCEAIIPLYMKKGADFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSKTGDFAQWYNPVWRNIKEHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDS--KLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMIS--PGKIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFEI 1745
            MCGI  IF S +S   LR  ++ CS+ LRHRGPDWSGY+I        HGI HERL+IIDPESG QPL S  G V++ ANGEIYNY  L    +       P TGSDCE +IPLY K G  F++ LRGMF+F IYDK  D FF  RDH+GI P+Y G   DGS+W SSEMKA+   C + +  PPG  +SS+ G+F QW+ P W    E P+  + LA LR+ F  AV RRMM+DVPWGVLLSGGLDSSLVAS+ACR  +   +S  K F    R+HSF++GLEGSPDL AA++VADFLGTVHH Y YT+QEGLDAI EV+  +ETYD TT+RASTPMFLMSRKIKAMGVKMVLSGEGADE  +LGGYLYFH AP+  EFFEETRDKV  LH++DC RANKST++WGVE RVPFLD DF+  AM   PE KM +  P KIEK I+RKAFDTP++ +LPQHIL+RQKEQFSDGVGY WID LR  A  EVTD Q  + A+RFP + PATKEAY YR IFE  +P+  AA TVP   SIACSTARA+ W ESF  RAD SGRA+ GVHD  Y + F+I
Sbjct:    1 MCGIFAIFNSSLSPDELRKLMVACSQRLRHRGPDWSGYQI-----HGSHGIAHERLAIIDPESGEQPLVSPCGNVIVCANGEIYNYRTLYDELKADGCEYNPATGSDCEVVIPLYQKYGMAFVDKLRGMFSFVIYDKAADKFFAVRDHMGITPMYYGHASDGSIWFSSEMKALHDQCSTYQQAPPGKYFSSEDGEFHQWFTPDWLTTTESPSETIHLAELRDYFVNAVRRRMMSDVPWGVLLSGGLDSSLVASIACRLHKQGSNSGAKAFVG-ARLHSFTIGLEGSPDLAAAEDVADFLGTVHHGYTYTMQEGLDAISEVIYHLETYDVTTVRASTPMFLMSRKIKAMGVKMVLSGEGADE--ILGGYLYFHHAPNGSEFFEETRDKVARLHKYDCLRANKSTSAWGVEVRVPFLDADFMNYAMGLEPECKMPAKAPRKIEKYILRKAFDTPEEPWLPQHILWRQKEQFSDGVGYGWIDSLRDVAEAEVTDAQMANAAHRFPYNTPATKEAYRYRAIFESHYPSHAAATTVPAEASIACSTARAMSWHESFSKRADPSGRAVAGVHDSEYSENFDI 568          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A448Z4V6_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4V6_9STRA)

HSP 1 Score: 697 bits (1798), Expect = 3.410e-240
Identity = 346/587 (58.94%), Postives = 438/587 (74.62%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEK--RRHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLSTEE----PLTGSDCEAIIPLYMKKG--ADFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSK---TGDFAQWYNPVWRNIK----EHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPG--------KIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFE 1742
            MCGI  IF S + E +LR +LI CS+ LRHRGPDWSGY+++         HGIGHERL+I+DPESG+QPL SRDG V+++ANGEIYN+ EL S+ +    P+TGSDCE I+PLY + G  A+ + +LRGMF+F +YDK+ D++ VARDH+GI PLYIGWG+DGSV+++SEMK++V  C   ++FPPGH Y SK    G+F +WY P W        E P        LR  F +AV RRMM+DVPWGVLLSGGLDSSLVA++  RH+     S+  ++FP++HSF+VGLEGSPDL AA++VAD LGT+HH Y YT++EG DAI +V+R +ETYD TT+RASTPM+LMSRKIKAMG+KMV+SGEGADE  + GGYLYFHKAP+ QEFF+ET DK+  LH +DC R NK+ ++WGVE RVPFLD DF++ AM  +P++KMI  G        +IEK  +RKAFDTPDD YLP  IL+RQKEQFSDGVGY W+D L+  A +E++D+ F + ANRFP + P TKE Y YR IFE F+P   A +TVP GKSIACST RA++WD +F  RAD SGRA G VHDDAY ++FE
Sbjct:    1 MCGIFSIFSSSLPEADLRKELITCSQKLRHRGPDWSGYKVIKPDANIPLAHGIGHERLAIMDPESGSQPLVSRDGNVIVAANGEIYNFKELYSSLKTPYTPMTGSDCECILPLYEEHGPSAEMVTNLRGMFSFILYDKKTDTYMVARDHIGITPLYIGWGNDGSVYVASEMKSLVGECNKFQNFPPGHIYCSKGPKAGEFQRWYKPNWAPEMLPGGEMPKEGYQSDVLRHAFERAVTRRMMSDVPWGVLLSGGLDSSLVAAICSRHI-----SRRSTSFPKLHSFTVGLEGSPDLVAAQKVADQLGTIHHPYTYTLEEGSDAIPDVIRCLETYDVTTVRASTPMYLMSRKIKAMGIKMVISGEGADE--VFGGYLYFHKAPNEQEFFDETVDKLSRLHMYDCLRCNKAMSAWGVEPRVPFLDADFLQVAMNLDPKEKMIRKGPEISKEDTRIEKWAIRKAFDTPDDPYLPDEILWRQKEQFSDGVGYGWVDHLKDIADKEISDQMFANAANRFPHNTPTTKEGYRYRMIFESFYPGEAAEKTVPGGKSIACSTERAMKWDATFALRADPSGRAAG-VHDDAYDEKFE 579          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A4D9CNJ7_9STRA (Glutamine amidotransferase type-2 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNJ7_9STRA)

HSP 1 Score: 695 bits (1794), Expect = 1.110e-239
Identity = 354/582 (60.82%), Postives = 429/582 (73.71%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKRRHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHEL------LSTEEPLTGSDCEAIIPLYMKKGADFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSKT---GDFAQWYNPVWRNIKEHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPG----KIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFEIGVEG 1757
            MCGIL IF S +SE +LR  +I+ +  LRHRGPDWSGY++   +      I HERL+IIDP+SG+QPL S DG ++++ANGEIYNY EL      +    P TGSDCE IIPLY+K G DF   LRGMF+F +YD+RDDSFFV RDH+GI P+Y G+G DGS+W +SEMKA+      +  FPPGH+Y S+    G F QWYNPVW +    PT RV+L  +R TF  AV RRMM+DVPWGVLLSGGLDSSLVAS+A R     P+++    +PR+HSFS+GLE SPDL AA EVA F+GTVHHSY++TVQEG+DA+REV+  +ETYD TT+RA+TPMFLMSRKIKA GVKMVLSGEGADE  + GGYLYFHKAP ++EF  ET DK+  L Q+DC RANK+T++WGVE RVPFLD DF++ AM  NPEDKMI       ++EK I+RKAFD P D YLP  IL+RQKEQFSDGVGY WID LR  A  +V+D+ F    NRFP + P TKEAY YR IF+ FFP+P+AA TVP G SIACST RA+EWD SF+ RAD SGRA+  VH+ AY + F    EG
Sbjct:    1 MCGILAIFRSSLSEADLRKIMIQNALKLRHRGPDWSGYKVYGSN-----AIAHERLAIIDPDSGSQPLVSPDGNIIVAANGEIYNYKELYEELGGIDFYTPKTGSDCEVIIPLYLKHGRDFPRFLRGMFSFVLYDRRDDSFFVLRDHMGITPMYAGYGADGSIWFASEMKALTDVVARVDVFPPGHAYDSELKGKGGFVQWYNPVWYDPTYLPTERVELLNIRNTFEMAVKRRMMSDVPWGVLLSGGLDSSLVASIASRLSGRDPNNE----WPRLHSFSIGLENSPDLAAAAEVAKFVGTVHHSYVFTVQEGMDAVREVIYHLETYDVTTVRAATPMFLMSRKIKARGVKMVLSGEGADE--IFGGYLYFHKAPDSKEFHAETVDKLRGLFQYDCLRANKATSAWGVEVRVPFLDQDFLDVAMTINPEDKMIVKDGEGRRMEKWILRKAFDDPADPYLPAKILWRQKEQFSDGVGYGWIDALRDHANADVSDKVFSAAENRFPYNTPLTKEAYYYRDIFDRFFPSPSAAATVPGGPSIACSTPRAMEWDASFRGRADPSGRAVAAVHESAYVEGFTPQAEG 571          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A1E7F5L7_9STRA (Asparagine synthase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5L7_9STRA)

HSP 1 Score: 693 bits (1788), Expect = 1.060e-238
Identity = 343/589 (58.23%), Postives = 428/589 (72.67%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKR----RHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLSTEE----PLTGSDCEAIIPLYMKKGA--DFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSK---TGDFAQWYNPVWRNIK----EHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPG--------KIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEFE 1742
            MCGI  IF S + E +LR +L+ CSK LRHRGPDWSGY ++     +     HGIGHERL+I+DPESG+QPL SRDG V+++ANGEIYN+ EL +  E    P+TGSDCE I+PLY + G   + + +LRGMF+F +YDK  D++ VARDH+GI PLYIGWG+DGSV++SSE+K+++  C   ++FPPGH Y SK    G F +WY P W          P        LR  F +AV RRMM+DVPWGVLLSGGLDSSLVA++  R +R      L S FP++HSF+VGL G+PD+ AAK+VAD LGT+HH Y YT++EG DAI +V+R +ETYD TTIRASTPM+LM+RKIKAMG+KMV+SGEGADE  + GGYLYFHKAP+ QEFF+ET DK+  LH FDC R NK+ ++WGVE RVPFLD DF++ AM  +P +KMI  G        +IEK  +RKAFDTPDD YLP  IL+RQKEQFSDGVGY W+D L+  A +E++D+ F +  NRFP + P TKE Y YR+IFEEF+P   A +TVP GKSIACST RA++WD SF  RAD SGRA+  VHDDAY   FE
Sbjct:    1 MCGIFSIFSSSLPEADLRKELVNCSKKLRHRGPDWSGYMVIEADASKGIPLAHGIGHERLAIMDPESGSQPLVSRDGNVVVAANGEIYNFKELYTALEKPYTPMTGSDCEVILPLYDQHGPTLEMIRNLRGMFSFILYDKSTDTYLVARDHIGITPLYIGWGNDGSVYVSSELKSLIGECNKFQNFPPGHIYCSKGEHAGQFQRWYKPNWAPEMLPGGMMPREPYQADALRHAFERAVTRRMMSDVPWGVLLSGGLDSSLVAAICSRQMR------LSSNFPKLHSFTVGLPGAPDIGAAKKVADKLGTIHHEYTYTLEEGSDAIPDVIRTLETYDLTTIRASTPMYLMARKIKAMGIKMVISGEGADE--VFGGYLYFHKAPNEQEFFDETVDKLSRLHMFDCLRCNKAMSAWGVEPRVPFLDADFLQVAMNLDPNEKMIRKGPGISKADTRIEKWSIRKAFDTPDDPYLPDEILWRQKEQFSDGVGYGWVDHLKDIAEKEISDQMFANAPNRFPHNTPTTKEGYRYRRIFEEFYPGEAAEKTVPGGKSIACSTERAMKWDASFSTRADPSGRAMAAVHDDAYDGSFE 581          
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Match: A0A7S2PGV7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PGV7_9STRA)

HSP 1 Score: 693 bits (1788), Expect = 1.140e-238
Identity = 352/588 (59.86%), Postives = 427/588 (72.62%), Query Frame = 3
Query:   51 MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKR--RHGIGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHE----LLSTEEPLTGSDCEAIIPLYMKKGA----DFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIGWGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSK---TGDFAQWYNPVWRNIKEH----PTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACRHVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYTVQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGADEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVEARVPFLDVDFIEEAMMTNPEDKMISPG--------KIEKDIMRKAFDTPDDVYLPQHILYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEAYLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRAIGGVHDDAYGDEF 1739
            MCGI  IF S +  T LR +LI+CS  LRHRGPDWSGY +V    +R   HGI HERL+I+DPESG QPL S DG ++++ANGEIYNY E    L +   P TGSDCE ++PL+ +       +  N LRGMF+  +YDK  D++F+ RDH+G  PLYIGWG+DGSV++ SEMK+MV  C   ++FPPGH YS+K    G F +WY P W    +     PT +     LR  F KAVVRRMM+DVPWGVLLSGGLDSSLVAS+  R+V     ++  S+FP++HSF+VGLEGSPDLKAAKEVADFLGT+HH+Y YT++EG DAIREV+R +ETYD TTIRASTPM+LMSRKIKAMG+KMVLSGEGADE  + GGYLYFHKAP+AQEF++ET DK+  LH +DC RANKS ++WGVE R PFLD DF++ AM  +P++KMI  G        +IEK  +RKAFDTPDD YLP +IL+RQKEQFSDGVGY W+D L+  A  EV+D+ F + ANR+P + P TKE Y YR IFEE FP   A  TVP GKSIACST RA+ WD SF  RAD SGR  G VHD AY D F
Sbjct:    1 MCGIFAIFSSSLEPTELRKELIKCSSKLRHRGPDWSGYLVVEKDGERPLNHGIAHERLAIMDPESGEQPLVSPDGNIIVAANGEIYNYKEIYAGLSAPYTPKTGSDCEVMLPLWSEMDGIPTPNLPNQLRGMFSVIMYDKTTDTYFIFRDHIGKTPLYIGWGNDGSVYVGSEMKSMVHECNKFQNFPPGHCYSNKGPNAGQFVRWYKPNWAPEMKPGLPPPTEKYQADLLRHAFEKAVVRRMMSDVPWGVLLSGGLDSSLVASICARNV-----ARRSSSFPKLHSFTVGLEGSPDLKAAKEVADFLGTIHHAYTYTLEEGADAIREVIRSVETYDLTTIRASTPMYLMSRKIKAMGIKMVLSGEGADE--VFGGYLYFHKAPNAQEFYDETVDKISRLHMYDCLRANKSMSAWGVEPRCPFLDDDFLQVAMNLDPKEKMIVKGPGVSKEDTRIEKWAIRKAFDTPDDPYLPDNILWRQKEQFSDGVGYGWVDSLKDIAEREVSDQMFANAANRYPHNTPTTKEGYRYRMIFEEIFPGEAAERTVPGGKSIACSTERAMNWDASFALRADPSGRCAG-VHDSAYDDNF 580          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig85.16154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL91_ECTSI0.000e+092.96Asparagine synthase (Glutamine-hydrolyzing) n=1 Ta... [more]
A0A835Z2W5_9STRA4.030e-29472.46Asparagine synthase n=1 Tax=Tribonema minus TaxID=... [more]
B8BZR9_THAPS2.660e-24561.03Asparagine synthase n=1 Tax=Thalassiosira pseudona... [more]
A0A7S2YB47_9STRA1.370e-24460.10Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3Q388_9STRA3.750e-24360.10Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1TW89_9STRA2.100e-24262.15Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A448Z4V6_9STRA3.410e-24058.94Glutamine amidotransferase type-2 domain-containin... [more]
A0A4D9CNJ7_9STRA1.110e-23960.82Glutamine amidotransferase type-2 domain-containin... [more]
A0A1E7F5L7_9STRA1.060e-23858.23Asparagine synthase n=1 Tax=Fragilariopsis cylindr... [more]
A0A7S2PGV7_9STRA1.140e-23859.86Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig85contigC-linearis_contig85:312732..325331 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1115.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FL91
Preferred nameASN2
KEGG rclassRC00010
KEGG koko:K01265,ko:K01953
KEGG ReactionR00578
KEGG Pathwayko00250,ko01100,ko01110,map00250,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004066,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005911,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009067,GO:0009267,GO:0009314,GO:0009416,GO:0009506,GO:0009605,GO:0009628,GO:0009642,GO:0009646,GO:0009651,GO:0009743,GO:0009744,GO:0009746,GO:0009749,GO:0009750,GO:0009987,GO:0009991,GO:0010033,GO:0016053,GO:0016054,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0030054,GO:0031667,GO:0031668,GO:0031669,GO:0032787,GO:0033554,GO:0034284,GO:0034285,GO:0034641,GO:0042221,GO:0042538,GO:0042594,GO:0042802,GO:0042803,GO:0043436,GO:0043603,GO:0043604,GO:0043617,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046983,GO:0050896,GO:0051716,GO:0055044,GO:0071496,GO:0071704,GO:0072330,GO:0097164,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901607,GO:1901700
EggNOG free text desc.L-asparagine biosynthetic process
EggNOG OGsCOG0367@1,KOG0571@2759
Ec32 ortholog descriptionAsparagine synthase (glutamine-hydrolyzing)
Ec32 orthologEc-15_004750.1
EC3.4.11.18,6.3.5.4
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons14
Model size2805
Cds size1749
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig85.16154.1prot_C-linearis_contig85.16154.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig85 313738..325281 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930645.5871987-UTR-C-linearis_contig85:312731..3137371622930645.5871987-UTR-C-linearis_contig85:312731..313737Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 312732..313737 -
1690881176.1175108-UTR-C-linearis_contig85:312731..3137371690881176.1175108-UTR-C-linearis_contig85:312731..313737Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 312732..313737 -
1622930645.8532019-UTR-C-linearis_contig85:325281..3253311622930645.8532019-UTR-C-linearis_contig85:325281..325331Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 325282..325331 -
1690881176.299048-UTR-C-linearis_contig85:325281..3253311690881176.299048-UTR-C-linearis_contig85:325281..325331Chordaria linearis ClinC8C monoicousUTRC-linearis_contig85 325282..325331 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930645.6013997-CDS-C-linearis_contig85:313737..3138631622930645.6013997-CDS-C-linearis_contig85:313737..313863Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 313738..313863 -
1690881176.1343145-CDS-C-linearis_contig85:313737..3138631690881176.1343145-CDS-C-linearis_contig85:313737..313863Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 313738..313863 -
1622930645.617346-CDS-C-linearis_contig85:314203..3143291622930645.617346-CDS-C-linearis_contig85:314203..314329Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 314204..314329 -
1690881176.1435597-CDS-C-linearis_contig85:314203..3143291690881176.1435597-CDS-C-linearis_contig85:314203..314329Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 314204..314329 -
1622930645.6388085-CDS-C-linearis_contig85:316306..3163721622930645.6388085-CDS-C-linearis_contig85:316306..316372Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 316307..316372 -
1690881176.1543124-CDS-C-linearis_contig85:316306..3163721690881176.1543124-CDS-C-linearis_contig85:316306..316372Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 316307..316372 -
1622930645.655773-CDS-C-linearis_contig85:316761..3169141622930645.655773-CDS-C-linearis_contig85:316761..316914Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 316762..316914 -
1690881176.1656659-CDS-C-linearis_contig85:316761..3169141690881176.1656659-CDS-C-linearis_contig85:316761..316914Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 316762..316914 -
1622930645.6772125-CDS-C-linearis_contig85:317450..3175941622930645.6772125-CDS-C-linearis_contig85:317450..317594Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 317451..317594 -
1690881176.180103-CDS-C-linearis_contig85:317450..3175941690881176.180103-CDS-C-linearis_contig85:317450..317594Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 317451..317594 -
1622930645.6934853-CDS-C-linearis_contig85:318669..3187411622930645.6934853-CDS-C-linearis_contig85:318669..318741Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 318670..318741 -
1690881176.1893651-CDS-C-linearis_contig85:318669..3187411690881176.1893651-CDS-C-linearis_contig85:318669..318741Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 318670..318741 -
1622930645.7130797-CDS-C-linearis_contig85:319292..3195111622930645.7130797-CDS-C-linearis_contig85:319292..319511Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 319293..319511 -
1690881176.2004766-CDS-C-linearis_contig85:319292..3195111690881176.2004766-CDS-C-linearis_contig85:319292..319511Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 319293..319511 -
1622930645.725618-CDS-C-linearis_contig85:319952..3200861622930645.725618-CDS-C-linearis_contig85:319952..320086Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 319953..320086 -
1690881176.2124403-CDS-C-linearis_contig85:319952..3200861690881176.2124403-CDS-C-linearis_contig85:319952..320086Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 319953..320086 -
1622930645.7368708-CDS-C-linearis_contig85:320809..3209121622930645.7368708-CDS-C-linearis_contig85:320809..320912Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 320810..320912 -
1690881176.2264702-CDS-C-linearis_contig85:320809..3209121690881176.2264702-CDS-C-linearis_contig85:320809..320912Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 320810..320912 -
1622930645.749995-CDS-C-linearis_contig85:321456..3215701622930645.749995-CDS-C-linearis_contig85:321456..321570Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 321457..321570 -
1690881176.2398584-CDS-C-linearis_contig85:321456..3215701690881176.2398584-CDS-C-linearis_contig85:321456..321570Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 321457..321570 -
1622930645.7757711-CDS-C-linearis_contig85:322524..3227341622930645.7757711-CDS-C-linearis_contig85:322524..322734Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 322525..322734 -
1690881176.256275-CDS-C-linearis_contig85:322524..3227341690881176.256275-CDS-C-linearis_contig85:322524..322734Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 322525..322734 -
1622930645.800508-CDS-C-linearis_contig85:323412..3234721622930645.800508-CDS-C-linearis_contig85:323412..323472Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 323413..323472 -
1690881176.2706306-CDS-C-linearis_contig85:323412..3234721690881176.2706306-CDS-C-linearis_contig85:323412..323472Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 323413..323472 -
1622930645.8153179-CDS-C-linearis_contig85:324691..3248331622930645.8153179-CDS-C-linearis_contig85:324691..324833Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 324692..324833 -
1690881176.279923-CDS-C-linearis_contig85:324691..3248331690881176.279923-CDS-C-linearis_contig85:324691..324833Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 324692..324833 -
1622930645.8293395-CDS-C-linearis_contig85:325201..3252811622930645.8293395-CDS-C-linearis_contig85:325201..325281Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 325202..325281 -
1690881176.2892447-CDS-C-linearis_contig85:325201..3252811690881176.2892447-CDS-C-linearis_contig85:325201..325281Chordaria linearis ClinC8C monoicousCDSC-linearis_contig85 325202..325281 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig85.16154.1

>prot_C-linearis_contig85.16154.1 ID=prot_C-linearis_contig85.16154.1|Name=mRNA_C-linearis_contig85.16154.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=583bp
MCGILGIFGSGMSETNLRSKLIECSKTLRHRGPDWSGYEIVTVSEKRRHG
IGHERLSIIDPESGAQPLFSRDGQVMLSANGEIYNYHELLSTEEPLTGSD
CEAIIPLYMKKGADFLNDLRGMFAFFIYDKRDDSFFVARDHVGIIPLYIG
WGDDGSVWISSEMKAMVAGCRSLRSFPPGHSYSSKTGDFAQWYNPVWRNI
KEHPTRRVDLARLRETFTKAVVRRMMTDVPWGVLLSGGLDSSLVASVACR
HVRDHPDSKLFSAFPRIHSFSVGLEGSPDLKAAKEVADFLGTVHHSYMYT
VQEGLDAIREVVRMIETYDTTTIRASTPMFLMSRKIKAMGVKMVLSGEGA
DEASLLGGYLYFHKAPSAQEFFEETRDKVLALHQFDCARANKSTASWGVE
ARVPFLDVDFIEEAMMTNPEDKMISPGKIEKDIMRKAFDTPDDVYLPQHI
LYRQKEQFSDGVGYNWIDELRAKAAEEVTDEQFKHRANRFPRDPPATKEA
YLYRKIFEEFFPTPTAAETVPMGKSIACSTARALEWDESFKNRADCSGRA
IGGVHDDAYGDEFEIGVEGAKKATGFANATEA*
back to top

mRNA from alignment at C-linearis_contig85:312732..325331-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig85.16154.1 ID=mRNA_C-linearis_contig85.16154.1|Name=mRNA_C-linearis_contig85.16154.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12600bp|location=Sequence derived from alignment at C-linearis_contig85:312732..325331- (Chordaria linearis ClinC8C monoicous)
CTCTGAGAAAGGAAGGGAAGCCGGGCGTGTCCAACTCGCCACCACAAGCC ATGTGTGGAATCCTGGGAATCTTCGGCTCCGGCATGTCAGAGACCAACCT CCGGTCCAAGCTGATCGAGTGCTCCAAAACGTGAGAGCATGTGTCAACCA AGTGTTTCGACCACGTTGCGACTTTTTTTTGCTGCTGCCTCTGTTGGCTG CTGCTGGAGTTTATTGAACTAAATAGTCTCTCATCCAAGCTGGGAGGTAG AAATTCAGGCCCATGCCGGATGATGGTACACAGGAGAGCTGGCATGTGGC ACTAGGTGGGTCTACTTGCCCTGGTGGACTCGTTTCGGCTTTGCCTTTTG CTCTCTCTCTCTCTCCACGGTCTGCATCATGTTGTGTGCTCATGTAGCTC CTGTTGTTAGAACGTACTCGCCTTCCAAGCCACCACTAACAACACACCCC TTTTTTTTACGTCTCCATTCTATGCCGCGACACGCGCCCATACCCTAGGC TTCGCCATCGTGGTCCTGACTGGTCCGGGTACGAGATCGTGACTGTGTCG GAGAAGCGAAGGCATGGTATCGGGCATGAGCGCCTGTCCATCATCGACCC CGAGTCAGGAGCGCAGCCTCTCTTCTCACGCGATGGCCAGGTATGGATCT ATACCTGTCTGTCCCCGGCGGCAGCAGCCCGCAGTAGGCGCGTGTGTAAC GAGACATCAGTAGCGCTTGAGAAGCTGCACAGCTCGGCAGTGCGAGGGGC TAGCAACCGCCGTGTTTCTTCCTCGATGCTAGATGCATATGTAAACACAC CCGCCGCATCGCAGACCTTTGGGTGCAAAGCAGCGTTGCAGCAGCGTGAA GCGTTGTACGGAGTACATAGCGAGCAAGGCACTGGCTCTAGGGACCGACC GCTCTCAAGGTTTTTGTTGCGTTGGGCACGCGCTGCTGTCGAGAATGTGT GCTGTGCCTACAAGGTGGCGCTGCCGCTGCCGCCCCAATCGCCTGCATGC TTCGGTTCGTTCAAGTTTTTTGTTCATGTTTTTTTTGCTGGTTTACTGGT CGGAATGCACAAGAGGGTCGACCTTGGATGTTGACGACAGCAGCAGCAGT GGTGAGCGCACCAGCCGCAGCATCACGGAGAGAGACAATCTGTCGACCGC AGGCATTTTCGATGTCTGACCCACACCCCAAATGCCAAACTGAGCTTTGC TTTGCCCAGTTGAGGCTGCCGCTCAGGAGAGGATGTACAGCTTATTTCTA GTCAGTGCCGTTTCAAAAGACTTGAGATGTGACATGCTTCGTCGATCCAC TATCGCACACCCGCCTGTTCGTCCTCATGATACGGTGGCGCAAAAAAAAT AGCGGTCGGTGTGGGGCGCGTGTAAATGAAAATATTGGTGCTGCCCCAAG TTTTACGCGCACCAACTGGCGGTGTCAAAAAGCTTAATAATTCGTGCACA TCACAGCTACTACAGAGTCGCGAAAACCTCAGTATCATAGCTGTATTGCC ACAAGGAACGTTCCCCATGTTCTGGCTCAACAGTTTAAGGGAGGAGTGTA TATACTCTAAACGCCCCTACGCTCCGTCCACGAGGGGCCCGCGTCTCACG CCCATCACATCGGTGCACAATCCATGAGCGTAAGCATTAGCATCCCTGTG TGGTTCGTGGCCTGTCCCTTTGTTCTTAGGCCGTGACGTCATGCATGCGA GGCTCCCCCTCCTTCTCGCCCCCCCCCCCTGTCTTGTCTTCTTAAAAGGA AATCTTGTTTTTTTCTGATCCCTGCTGTGTCTACTGCTGTGTCTATGGTA CCGTTGTTGGATGTTTGTTTTCAATTTAATTGTTGCCTTTTGGGTCAATT GTTTTTCAGGTGATGCTGTCCGCCAACGGAGAGATCTACAACTACCACGA GCTCTTGTCCACCGAGGAGGTGGGGTGCTTTTTTTTGTCTCTTTTGGTAC ACCTCTTTTTTCTTTTTTCTGTGGGACCACAAGATGCAGGGTGGGGTGTA GACTATTGCGGCGTGTTGACGGCTGCATTTTGCATTTTTGGTGTTTTGTT TGCCGCACATACAGTGTGTACAAAAAAAAAAGGTTTCGTGTGTCGTCGGT TGTTTACGGTTGTTGGTGATGGTCACCAGGTAGGTACACGGTTGACGATT GGAGGTTGGATGTTGGCACGGTGTTGGTGGCTTTGTCATTGCGTGGTGTT GCCTTGCCGCCCCTGTTTCCGCTCTGGTTGGGCAAGGAAGGGAGGTTGGC CTGAATGTTGTTCATGACAACCAACAGCAGTAGTCATCGCCTGCTGGTGC GAGAATCCGCTGGGACACGCGGTGCACTTGTAGGTTTGTCGCGCCCCCCG TTCCACTTCCCAGCCTTTTTCTACATTGTAGCCTATTGGTTGGCCTGTTT CCTTTACTTTTTTCTACCATTACTATCTCTCGCCCCTATCCCTTATCCCG AATCCCGCTGATGAACGATTGTCGGTTGTCAGTCGCCGGGTTTTTTAGTG AACTAGCTACTGTAGCTCAGCCGCTCGACCTAGACTGGTTAACCTTTTCG CGTTAACCCTTGCCCTCAATCTCGCCGCCGCACTCTCACGGATCCAGCCG TTGACAGGTTCGGACTGCGAGGCGATCATCCCCCTCTACATGAAGAAGGG GGCCGACTTCCTGAACGACCTTCGGGGCATGTTCGCCTTCTTCATCTACG ACAAGCGCGACGACTCTTTCTTCGTCGCCAGGGATCACGTGGGCATCATC CCCCTCTACATCGGCTGGGGCGACGACGGGAGCGTTTGGATCTCTTCCGA GATGAAGGTGAGATATGAGCAACAACGCGAACGCGCTTCTTTCCAAGATT GGTTTCGATTCGATTTCTACTCTTGCTTGTAGCGTTTACGTGAGCATCAC ACCGCGAAACGGCGCGAGTGAAACGGCGCGAGTGTAGTCGTAGAGGAAGG CACGCACGAGTACGAGCACCTTTTTATAGGCTGATTTTTGTGTTTTTTTC GATCCGAACGTTCACGTGAGCATCACGTCGTCAAAACCTGTGGATCTCTT TCCGGGATGAAGGCGAGCAAGAGCACGAGCATTGTTTTGTCATGAGAGTG TGTATCGTTTTGTCTTTTTTTTTTTTTTCATGACATAGCTATAGCGTCTA CGAGAAAACCAACTACGAAGTATTGTACTAATAGTGTGCATTGCGAAAGC GCATGGGTGTTGTCGGAGACGGAGATGGAGACGGTGTTGGTCCGAAGCTT GAGAACAATTAATTCGAGGACGTCTAAGGGCACTTCCCCCTTGTATGATA CCGCTTGTGTTTGTGTTGTGCCTCGTAATGTCACTGCTTGTGTTTGTGTT GCGGATGCTTGTTTCGTATCTTGTGCATGTCACTGCTGCGCTGAACTCAA TCGCATCTGCCGCGCCTACAGGTAACTGACGAGGCAAACTGAACTCGGAA GCAGAAGAGCTGGACTGACATAGCACAAAAACTAAAATGTTGTTTTTTGC GGCTCACGTGAATCACGACATCACGACCAATACGCTGTCGCAAACGCCTC GCAGAGCAACCCCCCGGACGCCGTCCATCGCAGCGCACCCTCATCACCAC CATCATCATCATCATCATCATCATCATCATCATCATCATGCCTGTTCTCT CTTTGTTGGCTAGTCTTCATCCGATTCGATTCTCAGGCCGTGGCGGCGCC ACCATTTCCTCTGTCGCGCCCTCACCATGTTCCTCTCTCTCTCTGCTATT TTGTTTTTCAGGCCATGGTGGCGGGGTGCCGCTCCCTGCGGTCCTTCCCT CCGGGGCACTCTTACTCCTCCAAGACGGGAGACTTCGCTCAGTGGTACAA CCCCGTGTGGCGCAACATCAAGGAGGTATGGGCAGTAAGGAAAAGGCATC GAGTATGTGGGTGTTTGGGCAAGCGCGTTCCCGCCCTCGCGCCTGCAACA CGTAGCGTCAACATACCTGCTTTTGAACCCCTCCAGGTATCTCGTTCGTC TTGTTGTATACGTCTACGTATACGACGATCTGGCATGCTCGTTTGGTTTG CTTTTGGTAGATACATTGCAGTGCCGGCTTGTCCTTACGGTTCACCTATG TATACCACCAAAAGTGATGGCCATCAGCGAGTTAGTGACCCGGGATGAGA CAGCCCCGCGAGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTAGCTGTT GCGCCGTTTGCCAGTGTGGACTTTCTTTCTGGCCTCTTCTGTCAGATACC ACGCCATGTTGATGCTCCTGCGATTGTTGCCACGCTGATGAGTTGCTTTG GAGCTGGCGTTGCGCTTGATCTCTCCCTTGTCTCCTTTCTCTTCTTTATT CTCTCACTTTTCTCCCCACGTTATGTTATGTTGTGTCTTGTGATGATGTG ATTTATGTGGTGATTTCAGCACCCGACGCGGCGTGTGGACCTCGCTAGGC TAAGGGAGACGTTCACCAAGGCGGTGGTGAGGAGGATGATGACGGATGTG CCGTGGGGCGTGCTCCTCTCAGGTACGCTAGACGATGCCAGATGACACTA ATCTATTTTGTCTACCATTCTTCGCCGCGTTGTGCCTGGCCTGCTCCTGT TGCCATGCCGGACTGAGACTATTTCGGGAGAGGCTATTAGTAGGGTTTCG TGATGGGTGTTGTGTGCTGTGCCTACGCGTGGCGTTTTTTTTCTGCTGAT ACACGTGCCGTAGGTCGTGTGCGTTGCAAGTATACTTTCGCGCGGCCTAT CGTGTTGTTGGTGTTGGCTGTTCCGATCACACGCACACAGCAGTGATATT GATGTGATAGTTCTTTTGCTCGGGTGATTTCCAAAAGGTAGGTGGTATTT TTTGGTTGATTTCCAAAAGACATGATAGCATTTTTTCTTGTATTTTTTCG GCCCGTCATTGCCAGCCAGCACCACGAGGAGCCATGCCACGCTGTAGCCC ATTCTAGCACCGACACTCAAGCTGGTGTTTTCCGAAAGGCTTGAACACGG ACACTTTGCGTGGCTACAGCAGTTTAGGCTCATTTGGATGACGATTGTTA TGATTTGACACATTTGGATGACGGATTTTGTTGGCAGGTGGAGGTAAAGC ACTGCATGGGCGGTTGCACGGACGGCTCCCATACTCCAGACTGTTGCTTG GAGCACGATTGTCCCCCCCCACCAAACCTATAAAGTACTCCTATTGATAT TTTACTTCCATGTGCGACCTGATGGGACCGATTGAATTGAATCAGGGGGG CTGGACTCTAGCTTGGTGGCGAGCGTGGCGTGCAGGCATGTGCGGGATCA CCCGGACTCGAAGCTATTCAGCGCCTTCCCCAGGATACACTCCTTCAGCG TGGGTCTCGAAGGCTCGCCCGACCTTAAGGTGAGGTCTTGTGGCGGCTAG TGGTTGGGGCCTTTTTTTTCATCGCCTCTTTCTATTAGGTGTAGCTTTTC ATGGGATGGGTTGGATTGGGTTGGATGAGATTTAGTTGTCTTGCCTCGTG GTGATTTTGTTGTCACAAAACAGACGTGCCACAGCCAGACAAAGCGCTGT GACAGTGCCGAACATATTGCCGATGCCAGTCATTACCTTCGTCGATTGTG ACGATGAAAGTCAATATCCCACTCATTGTTGTCCTCGTCGTTGTCGTCGT CGTCGTTGTTTTTGTTTGACAAATGACGGTTACCCCACTGCTGTGTTGTT GTCGTTGTTTGTTGACAATGCTATGATGCTGTTGATGTTGATGTTGATGT TGATGATGATGCTGTTGTTGTTGTGGATGTTTTTGCTATTGCTGTTGTTG TTGATGTTGACGTTGTCCAGGCCGCGAAGGAGGTGGCCGATTTCCTGGGA ACGGTGCACCACAGCTACATGTACACGGTGCAGGAGGGTCTCGACGCCAT CCGGGAGGTGGTTCGGATGATCGAGACCTACGACACCACCACCATCCGGG CCTCCACGCCCATGTTCCTCATGTCTCGAAAGATCAAGGCGATGGGGGTC AAGATGGTGCTGTCGGGAGAGGGAGCAGATGAGGCGAGTGTGCTGCATGT CGCCGGTAGAGGTTCATCTAGCGGTCGATAGACGCGGTGCAGTGATACGT TCATTTATTGTAGTACCCACGGGTGCTGCATAAGTTAGAGGTTATTGCAG CAGACGATAGATGCCGTGCGCGCTGGGGCCCAGCAGAGTGCGCATACGGT GCTCACATGTTTGGTTTTGCGCGCACCTCTCTCTCTCTCTCTCTCTCTCT CTTTCTCTCTCTCTCTCCTTGTCTCTGCTGCGTTTTTTTTCCCGCTTGTG AGCCAGAAAGCAACCTGTACTGTACTTCCAGACCGTCGTTTTTCTTCACG TGTTTCCTCGGAGCGTTAGTTGCAGGCTATTTCTTGAGGTTGTAAGCTCA CTACTTGTAGAATGTTTGTTAAAAAAGTTTATTAGAATGCTATTTTTTGT CCGGGGAATTCCGCCATGTATCATGTCTCACGTTCTTCTTTCTGTTCTTC TGCTTTGCCGTGCGTCCCTCCGTGCCCATTTGCTGTTTCTCTTTTGACAT CGATAACGGACAACGACATGGACATCGACATCGACATCAGCTCCTGGGTG GGTACCTGTACTTCCACAAGGCGCCCAGCGCGCAGGAATTCTTCGAGGAG ACTCGCGATAAGGTGCATCACTATTGTTAAAAACCCTCAACTTCCAAGTT TCGAGCCTTCGAATAGGTCTGGCCGCTGGTTCACCAATGTACAGGTTTTT CTTTGTAACGCTGCCGCCGGTGTCTGGCTTATAGTAAACATTAACATTAA TGTAAATGCCACCGTAGATTGACCCGTTAGAGTGACGTCAGATGACCAGC CAGAACCTGTGTCCTGGCCGGGGTATCACAGAGACAGACAGAACCGTTCC CCGGATTCCTCGGAGGAACAGAACGTTCCTCGGATGAATGCGGGGTATCT ACCCGTGTGCAGTTGCACCCCTGGCTCTCTCGCCCACACACGCACAACCC TGCGTGTGTATCTCTACACAACACAGCCACCCCCTCGATATTAACATCAA CATTTACTTGTATGCCTGGAAGTGTTTGTTTTGCGAGGTTGTTTGTACTG TAGAGTGGGCCGATGTATGCCCGGGTTGTGTACCGTTCGGCGATGTTTAA AGTGTTCGCAGCGGTTGTGAGCCCCGTTGTAGTGCGACCACGGTGTACCG TTTGGCGCGCATGTCGTGGCGGGCAAGCTCGCAAAGACGAACTGGTGGGT GAACGCGTTGAGTTGCACCGGACGACACGAGAGAGAGAGGGGGGGTGGGG GGCAGAGAGAGCCAGCCAGATAGCCAGCCAGACAGCCAGACAGGTGTTTT GCACAGGTCACAATTGTTCAATTGTTATTGTTTCACGAGTTTCTGCTGGC TATTGGCTATTGGCTATTGGCTATTGGCGACCCGGTGCTCCCGACCAACT CTAAAGAGTCTTTTAAATCTTTTGCTGGCGGGAGCTAAATTGCTCCCGTT CGCAATCCTACCCCCTCACCCTTGTAGCGGTGTAGCTCTGGGCCTCTCGC CTGTCCTGTTTTTCTCTCGCCTTGTCGGAGCAATCAACCAGAACCTTCGC AGTCGCCGGCCCGTTCCAACCTGTTCTCTTGCGTGACTCCTTGTATAGTA TACATGTCTGTTTTTGAATATTCTCCCTCTATTTTTTGTTCTACTGCCTG TCGCGCGCCATGGATTCTGTGCGATGCGATGGACCAGGTGCTGGCGCTGC ACCAGTTCGACTGCGCCAGGGCCAACAAGAGCACGGCCTCGTGGGGCGTG GAGGCGCGCGTGCCTTTCCTGGACGTGGACTTCATCGAGGAGGCCATGAT GACCAACCCGGAGGACAAGATGATCTCGCCCGTGAGTTGTCAAAACAGTC CAAACCGCACAGCCTTTTTGTTCTGTCCTAAACGTCAGCGGTCTAATCTA AATTGCGTCCAATCCACCACCGTACGCCAAACGGGTTTTGGGTATGCTAT GAACTCAATGCTATAGAGCAGTCTACGCCCAATCCAACTTACCAAAACGG GCTATTGTATCCACGAGGACTCTGTTGTTGTTGTTGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGATTCTCTTGACCGTTCCTCACC GCCCTAGGCTACATCTATACAGTGATACGATCTTGTTTCCCGCGCGATGG GTTTGTAGACAAGGCGCAGAGGTTTGCCCGCATCTGGCGACTGGATGGTG TGGTGAAACCTTTTGCGGGATTGAGAAGCACAGGTAGGATGGTGCAACGG CGGCTTGTGGCTTGTGTTGCGACGGGCCATGGTCACTCAGACTTCCACCT CCTGGTGTGCATTCGACGATGCTTCGTAATCTGATGTGGTGCGCACATGC GATGTGACACGACACAGGGCAAGATCGAGAAGGACATCATGCGCAAGGCG TTCGACACGCCGGACGACGTGTATCTGCCGCAGCACATCCTGTACCGGCA GAAGGAGCAGTTCAGCGACGGGGTGGGCTACAACTGGATAGACGAGCTCA GAGCCAAGGCGGCGGAAGAGGTGATGATGAGATGGCGACTTCTCTTTCTG CGTCCTTCGGCTTAGGGTTTATTTTTTGGCTTAGCGCTGACCCTCGTGGC GCGGGGCTGGGTATGTATGGCCTTATTATTTAGAAGAAAACCCGACACGC CTACCGATCGATCGACCGACGTTAGTTTTTTCGTTTGTTCTTTCTTGCGC CCCTTCGTTTTCAGCTTTTCTGGAGCCACCCACCCATTTGTGCACCGCCG CGGAGAAAGATAGCGCCCCCTTTTGTCTCAATCGACCTTGATGCCGAGTC CCTCTCATGTTTTCACGTTGCCTTCTCGCTGCTCTCCCTTTTTCTTTTTC TCTCTCTTCGTCCTTTTTCTTTTGTCGTGGGGCGTCTTGGCGTGTTTCGG TGTGTGCAGGTGACGGACGAGCAGTTCAAGCACCGCGCCAACCGCTTCCC CCGCGACCCACCCGCCACCAAAGAGGTACGGTGCTGAGCGGCGCGATCAG TAGTGTTGTGGTGAGGAGGATCGAGGTGGTATTGGTGCTCGCATGCCTGC TGAACGTACGAGTCAGGAGCTCCGCAGAGTACAAGCCGGGGGCTCCTCGG AAGAAGAGTTGGAGGAGAGGAGTTTATTTACCGTACATACTCGCGGGGTT TGCTTGAGTTCGAACTCACCCATTTCCATTCAGTTTTGGGTACGCCCCCC CAGGCGTACAGGGCACCTTTCGCAACCGCTGTTGTTGGCGGTTTCGGTTT GTACTTTTTTAGCTTTTGGCGGTGGTCGCCTGAAACACGAGCGAGCACGA GAGTAACTGCTTCCCGGTTACCATCTAATATTTAGATATTTAGATATTTA GATACGAAAACGTGTGCTCTCTGGTAAATAAACGACCGCGTAAAACAGCA GCTTAATATACGTAGCACGTCTTCCGGCCATGGCCATGGCCGGCCCGATG TGGGGAGGGTCTTTCTGGCGGGTGTAAGGCCGGACTCACCCTCAAGGAGT GATTCCTTCTTGCTACTACCCCGGTCCTCACCGTCCGTGGTGTGGTGGTA GAGTTGGGTCAGCACGGTGCATCAGGCACTCACACCCCCTGTTTTTCAGT ATTTATCTGCGTCATCGGATAGATAGCCTTTCTGCGTGAGCGGACAGGCG TGGTTAGTGTGTGCGCGGAGGCAGATGGACACTGTGGCCGAAAGCTGGTT GCACCCAGTGTGCACCGGTGTGTAGGATATGGACTCGGCGACAAGGATGG AGGGGAGGTCGCTGACGGATGGATGTGATCAGTAAGGTCGGATCCTCTGT TCGAGAAATCAAGAGATCAGCACCGGAGCGCATCATGAAGGAGGAGGGAT ACCGCACGAAGGAGCAGAAGGGGCGACGGACTAACAACAACGAGAGATCG CGAGACCATGGACGCGGGCGAGGATGGACGAGAGCGCTTGGAGCTGGCCT CGTGAAAGGAAGAGCGAAGAACAAGAGAGAGGAGCAAGAAGATGGAATTT TCTACCGATTGTGTCAAAAAATTGTTTTGCTCTTGCATTAGATAAATACA TGCAGAGGGTCTTTTATAGGACTCCGGACTAACCCTGTGTACGCCGATGA TACGCACTAGGCCGTGAGTCTAGATTGTGAGTAGTAGGTGAACACATGAC TTGTCTGTCGCATTTTGTTAGACTTGCATTTGTTTTGGCCCGAGCGTTCG AAGAACACCGTCTCCCTGTTCATTTTTTTCTGATTTTTGGATCTTCCTAT TCTGTCGTTTGAGTGCCGTCTCCGCCGCGGTTTTGTTGTAGGACGGTCTA TTGAGCAGCACTCCAGACAGCAGTTGCAGTAGGTCTACCTCGGGGACTTG TAGGACGGTCTATTGAGCAGCACTCCAGACAGCAGTTGCAGTAGGTCTAC CTCGGCGACTTATGTATGTGACACGCGGACTGTTGCAGACAGAATTTTCG TGACTGGTCAACTTTTATTGCTGTAGTTCGATTGGGCGTTCTCTATATTG ATTCGTGGTGCAGGTTGCCTCACCCTCGTGTGTTTTTGTGGTTTTATTTA GGCTTTCTGCTAGCCACGTTATGGTTTTTGGGTATTATTGATGGTAGGCT CCTTGCGCTCTGTGACCACGGAAATTGGCCGTGGCTGTTGGATCAGTACG GACAAAGGGGGTACTGGGTGGAGAGATCGGGATGGTTTTTTATGTGAAGA CAACAACAACAACAACAACAACAACTTCAGTTCGCTTGCCCGACTAGGTT TCTTACCCCCCGCCCCCAAGGGCCAAGGGTTTGTCCCCTTGTCACTCTCT GTTGCCCGTTTGCCCCCCTGCAGGATGTGAGGTTCGTGTTGTGCAACAAC CGTCGCGTATGCGTAGCAAGGACCATACCCACCGCCCCTCCTCTGGCGTT TCCCGCTCTCCTGTGCACCCTTTTTTTTTTTTTTTTTTTTTTTGTTTTTC AGGCGTACTTGTACCGCAAGATCTTCGAGGAGTTCTTCCCTACCCCTACT GCCGCAGAGACCGTGCCCATGGGAAAGTCCATCGCGTGCTCCACAGCCCG CGCGCTGGAGTGGGACGAGTCTTTCAAGGTGAACAATCGAGTAAAACATG TGTCTCGGGCGTGAGGCCCGCTTTTTCGTCGCTCGCTCTTGGGTGGCCCT GTGACCGCAAGTAGGGCGCAGCCTTCATGTGGAATAGTTCCTGGTATACA ACAAGAGGTCTACATTCAACCTACGACGACACCGTTCGACGCTATTATAG TAGCAGAGTCGTTCCTGCCTGTCGTTCTCAACAGCATCATCGATCTAAAT AACTAAATGATGTATCTGTTCTTCCTTATCACCCCCTTCCCGCCGAAACG GGTCCCGTTCGCTTGTTACGTACGTCTCACGCTCCTTGATGGGTTTGATT TGATGGGTTTGATTACAGAACCGCGCGGACTGCTCTGGGCGTGCGATCGG AGGGGTGCACGACGACGCCTACGGGGACGAGTTCGAGATCGGCGTCGAGG GTGCCAAGAAGGCCACCGGGTTCGCCAACGCAACGGAGGCTTAACCTAAC CTAACCTACATGCCACTCAACTTTGTTGCTCGCGAGACATTCCGTGTTTA GCGCGTGCTTCGTGTGTGCCGTCTCTAGCGACGTGCTAGGTTCTGCCGTG CGCTCTCCGAAGTTATTTGTCCAGGACATCCAAGAGCAGCTTTGATATCC GGTGAGCTTTTCGCGAATCGCACCGTCTCTCGTTTTGGGGCCTCTACGCG TCTTGCAGCGCGCAGGGAAAGTGAGGTAGTCGAGGTTGGCTTCCCGGCGG ATGAGAGTTTTTTTCATGAGTGGAGGGCAGAGGAAGCGCATGTAATATGG AATGTGGCGGAGGCTGACGAAAAACAACAGACCACGGCCAACAACACTCA AAATAGGCAGGGGTGGTGAGTAGTACCGCGCGGGATTTGTGGGCCACGAT GGTAGTAGGGTGGATGGGGATACGTGCCAGTTAAAGTTTGCGCGGCACGC CTTCTGGCGTCGATCAGCAATCGATTCATGGCGCAAGTTTTGGGTTCATG GTGGTGGTGTACAAGCAGCCAGGGTGCCCCCGTTGGGATTGATGTATCTA AACATGGGCGAGGCCTATTTTTGGACGTTTTTATCGAATGTTGACATCTG GCGTAAAAGGTGTCTTGCGCCCCGGAGCTACTTTTTGTTTTGAATGTTCA TTTTTTTCCAGACACACTCAGGAACATGAGTTTCTCAGAAACGTTGTCCC TACTTTAGTTCCTGCCGTTTTACTGCTGGTCTCAGCGGATCGAGGTTGTT TGCTTCATGCATGGTGCATTCTGTATCGGCCACCACTTTTTTTTTCCTTT GGGGAATTTTTCTATGCGCTCGAAAAACGCTGCGTATGATTCAAGCAGCA GCGTGGACTTCCAAATCTGTTGCGTATTTCCCACTGGTATACTGCTTGCC GCGTGCTACTCGGATGAGTGGATTCGGCCATTGGATTACCCCGTCATCGA TAATCGATAACCGTTCTTGCCGAACGTAACGTGAAAACACACACACGCAC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig85:312732..325331-

>mRNA_C-linearis_contig85.16154.1 ID=mRNA_C-linearis_contig85.16154.1|Name=mRNA_C-linearis_contig85.16154.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3498bp|location=Sequence derived from alignment at C-linearis_contig85:312732..325331- (Chordaria linearis ClinC8C monoicous)
ATGTGTGGAATCCTGGGAATCTTCGGCTCCGGCATGTCAGAGACCAACCT
CCGGTCCAAGCTGATCGAGTGCTCCAAAACATGTGTGGAATCCTGGGAAT
CTTCGGCTCCGGCATGTCAGAGACCAACCTCCGGTCCAAGCTGATCGAGT
GCTCCAAAACGCTTCGCCATCGTGGTCCTGACTGGTCCGGGTACGAGATC
GTGACTGTGTCGGAGAAGCGAAGGCATGGTATCGGGCATGAGCGCCTGTC
CATCATCGACCCCGAGTCAGGAGCGCAGCCTCTCTTCTCACGCGATGGCC
AGGCTTCGCCATCGTGGTCCTGACTGGTCCGGGTACGAGATCGTGACTGT
GTCGGAGAAGCGAAGGCATGGTATCGGGCATGAGCGCCTGTCCATCATCG
ACCCCGAGTCAGGAGCGCAGCCTCTCTTCTCACGCGATGGCCAGGTGATG
CTGTCCGCCAACGGAGAGATCTACAACTACCACGAGCTCTTGTCCACCGA
GGAGGTGATGCTGTCCGCCAACGGAGAGATCTACAACTACCACGAGCTCT
TGTCCACCGAGGAGCCGTTGACAGGTTCGGACTGCGAGGCGATCATCCCC
CTCTACATGAAGAAGGGGGCCGACTTCCTGAACGACCTTCGGGGCATGTT
CGCCTTCTTCATCTACGACAAGCGCGACGACTCTTTCTTCGTCGCCAGGG
ATCACGTGGGCATCATCCCCCTCTACATCGGCTGGGGCGACGACGGGAGC
GTTTGGATCTCTTCCGAGATGAAGCCGTTGACAGGTTCGGACTGCGAGGC
GATCATCCCCCTCTACATGAAGAAGGGGGCCGACTTCCTGAACGACCTTC
GGGGCATGTTCGCCTTCTTCATCTACGACAAGCGCGACGACTCTTTCTTC
GTCGCCAGGGATCACGTGGGCATCATCCCCCTCTACATCGGCTGGGGCGA
CGACGGGAGCGTTTGGATCTCTTCCGAGATGAAGGCCATGGTGGCGGGGT
GCCGCTCCCTGCGGTCCTTCCCTCCGGGGCACTCTTACTCCTCCAAGACG
GGAGACTTCGCTCAGTGGTACAACCCCGTGTGGCGCAACATCAAGGAGGC
CATGGTGGCGGGGTGCCGCTCCCTGCGGTCCTTCCCTCCGGGGCACTCTT
ACTCCTCCAAGACGGGAGACTTCGCTCAGTGGTACAACCCCGTGTGGCGC
AACATCAAGGAGCACCCGACGCGGCGTGTGGACCTCGCTAGGCTAAGGGA
GACGTTCACCAAGGCGGTGGTGAGGAGGATGATGACGGATGTGCCGTGGG
GCGTGCTCCTCTCAGCACCCGACGCGGCGTGTGGACCTCGCTAGGCTAAG
GGAGACGTTCACCAAGGCGGTGGTGAGGAGGATGATGACGGATGTGCCGT
GGGGCGTGCTCCTCTCAGGGGGGCTGGACTCTAGCTTGGTGGCGAGCGTG
GCGTGCAGGCATGTGCGGGATCACCCGGACTCGAAGCTATTCAGCGCCTT
CCCCAGGATACACTCCTTCAGCGTGGGTCTCGAAGGCTCGCCCGACCTTA
AGGGGGGCTGGACTCTAGCTTGGTGGCGAGCGTGGCGTGCAGGCATGTGC
GGGATCACCCGGACTCGAAGCTATTCAGCGCCTTCCCCAGGATACACTCC
TTCAGCGTGGGTCTCGAAGGCTCGCCCGACCTTAAGGCCGCGAAGGAGGT
GGCCGATTTCCTGGGAACGGTGCACCACAGCTACATGTACACGGTGCAGG
AGGGTCTCGACGCCATCCGGGAGGTGGTTCGGATGATCGAGACCTACGAC
ACCACCACCATCCGGGCCTCCACGCCCATGTTCCTCATGTCTCGAAAGAT
CAAGGCGATGGGGGTCAAGATGGTGCTGTCGGGAGAGGGAGCAGATGAGG
CGAGTGCCGCGAAGGAGGTGGCCGATTTCCTGGGAACGGTGCACCACAGC
TACATGTACACGGTGCAGGAGGGTCTCGACGCCATCCGGGAGGTGGTTCG
GATGATCGAGACCTACGACACCACCACCATCCGGGCCTCCACGCCCATGT
TCCTCATGTCTCGAAAGATCAAGGCGATGGGGGTCAAGATGGTGCTGTCG
GGAGAGGGAGCAGATGAGGCGAGTCTCCTGGGTGGGTACCTGTACTTCCA
CAAGGCGCCCAGCGCGCAGGAATTCTTCGAGGAGACTCGCGATAAGCTCC
TGGGTGGGTACCTGTACTTCCACAAGGCGCCCAGCGCGCAGGAATTCTTC
GAGGAGACTCGCGATAAGGTGCTGGCGCTGCACCAGTTCGACTGCGCCAG
GGCCAACAAGAGCACGGCCTCGTGGGGCGTGGAGGCGCGCGTGCCTTTCC
TGGACGTGGACTTCATCGAGGAGGCCATGATGACCAACCCGGAGGACAAG
ATGATCTCGCCCGTGCTGGCGCTGCACCAGTTCGACTGCGCCAGGGCCAA
CAAGAGCACGGCCTCGTGGGGCGTGGAGGCGCGCGTGCCTTTCCTGGACG
TGGACTTCATCGAGGAGGCCATGATGACCAACCCGGAGGACAAGATGATC
TCGCCCGGCAAGATCGAGAAGGACATCATGCGCAAGGCGTTCGACACGCC
GGACGACGTGTATCTGCCGCAGCACATCCTGTACCGGCAGAAGGAGCAGT
TCAGCGACGGGGTGGGCTACAACTGGATAGACGAGCTCAGAGCCAAGGCG
GCGGAAGAGGGCAAGATCGAGAAGGACATCATGCGCAAGGCGTTCGACAC
GCCGGACGACGTGTATCTGCCGCAGCACATCCTGTACCGGCAGAAGGAGC
AGTTCAGCGACGGGGTGGGCTACAACTGGATAGACGAGCTCAGAGCCAAG
GCGGCGGAAGAGGTGACGGACGAGCAGTTCAAGCACCGCGCCAACCGCTT
CCCCCGCGACCCACCCGCCACCAAAGAGGTGACGGACGAGCAGTTCAAGC
ACCGCGCCAACCGCTTCCCCCGCGACCCACCCGCCACCAAAGAGGCGTAC
TTGTACCGCAAGATCTTCGAGGAGTTCTTCCCTACCCCTACTGCCGCAGA
GACCGTGCCCATGGGAAAGTCCATCGCGTGCTCCACAGCCCGCGCGCTGG
AGTGGGACGAGTCTTTCAAGGCGTACTTGTACCGCAAGATCTTCGAGGAG
TTCTTCCCTACCCCTACTGCCGCAGAGACCGTGCCCATGGGAAAGTCCAT
CGCGTGCTCCACAGCCCGCGCGCTGGAGTGGGACGAGTCTTTCAAGAACC
GCGCGGACTGCTCTGGGCGTGCGATCGGAGGGGTGCACGACGACGCCTAC
GGGGACGAGTTCGAGATCGGCGTCGAGGGTGCCAAGAAGGCCACCGGGTT
CGCCAACGCAACGGAGGCTTAAAACCGCGCGGACTGCTCTGGGCGTGCGA
TCGGAGGGGTGCACGACGACGCCTACGGGGACGAGTTCGAGATCGGCGTC
GAGGGTGCCAAGAAGGCCACCGGGTTCGCCAACGCAACGGAGGCTTAA
back to top