mRNA_C-linearis_contig84.16126.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: D8LMS3_ECTSI (Centromere-associated protein NUF2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMS3_ECTSI) HSP 1 Score: 566 bits (1459), Expect = 2.240e-198 Identity = 331/454 (72.91%), Postives = 365/454 (80.40%), Query Frame = 1
Query: 1 MADGADVAYSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKRSEFAARSSEKAELQRKLVRFDEKLAHLRKQAAFKTDAMAEEIEAIKAAIAENEKHYEEARARMEESKAILEQHQQEKENVETEMANNVAGTKHLLTQVGIITRTHAQRLQAAMREGPNTNSSTVL 1362
MADGADVAYSFPMLNSKKIVGYLGDLNIHVSEQMLA+PK+HV Q+TMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNV RM+RISRIEDF+LKDMSDPN KRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAA KLQ+EH+DIQDRMAEK KAIE V AKHEA LQAQVVSSP+RI+REVSDLQQ+LEQEL+EVEAET+K Q+ K SVVVM ARREL KAT NIEEAATEL KQESA +EVKNTQYKIHEKR++FA RSSEKAELQR+LVRF+EKLAHLRKQAAFKT+AMA E+EAI+AAIAENE HY EA ARMEES+A+L+Q++QEKENVE E+A NV+ TK LLTQ+G IT +A+RLQAAMR+G + + STVL
Sbjct: 1 MADGADVAYSFPMLNSKKIVGYLGDLNIHVSEQMLASPKDHVPQLTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVCRMMRISRIEDFALKDMSDPNQKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAXXXXXXXXXXKLQEEHEDIQDRMAEKNKAIEAVNAKHEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLQAQVVSSPKRILREVSDLQQSLEQELSEVEAETRKAQSFKHSVVVMNKARRELAKATANIEEAATELSKQESAMREVKNTQYKIHEKRNDFATRSSEKAELQRRLVRFEEKLAHLRKQAAFKTEAMAGEMEAIRAAIAENEAHYNEAHARMEESQAVLDQYRQEKENVEAEVAKNVSDTKELLTQIGGITGAYARRLQAAMRDGEH-HPSTVL 453
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A6G7NUH2_SACJA (Nuf2p n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G7NUH2_SACJA) HSP 1 Score: 449 bits (1156), Expect = 2.040e-152 Identity = 260/454 (57.27%), Postives = 343/454 (75.55%), Query Frame = 1
Query: 1 MADGADVAYSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKRSEFAARSSEKAELQRKLVRFDEKLAHLRKQAAFKTDAMAEEIEAIKAAIAENEKHYEEARARMEESKAILEQHQQEKENVETEMANNVAGTKHLLTQVGIITRTHAQRLQAAMREGPNTNSSTVL 1362
M DG DV YSFP+LNSK+IVGYL D++IHV+E++L++PK+H QV M+FE+LVETT+GVTKEEMSQP FAGLGCL+ PELHD++I FLALFRNV +M++IS+I+DF+LKDMSDP RLRRQLSA INFVRF+E K+ +Y + +A+K+ +AA ++ RN KL D+ DD+Q RMAEK+KAIE + +KK N KD+VA++ AAL +AE+EK+ LQ QVV+SPQRI+REV+D QQAL+QELA+V+AE + TQ L+QSVVV+G A+REL KA +IEEA TEL KQESA+KEVK+TQ KI EKR E+AAR+SE +E QR+LVR +EKL HL+KQAAFKT+A A E++A++ AIA+ E + EA R+E++K+ +EQH QEK +E ++ + V TKHL+ Q+ I R H RL+ AMREG + SSTV+
Sbjct: 1 MGDGGDVGYSFPVLNSKQIVGYLSDVHIHVAEEVLSDPKQHASQVVMVFEKLVETTMGVTKEEMSQPAFAGLGCLSNPELHDDNITFLALFRNVCKMMKISKIDDFALKDMSDPTRPRLRRQLSAAINFVRFREEKDVMYQEWLARKKSVAAASKASKLRNIKLADDLDDVQSRMAEKKKAIEDIXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKANFAAKDKVASSMAALKQAEVEKERLQGQVVNSPQRILREVADQQQALDQELADVQAELQNTQKLQQSVVVLGRAKRELVKAAASIEEAGTELSKQESAYKEVKSTQRKIVEKRGEYAARASEISENQRRLVRLEEKLFHLQKQAAFKTEATAGELDAVRTAIADKEGQWSEAHGRLEKAKSAVEQHLQEKNLLEDQIEDRVRETKHLVQQITTICRGHGVRLREAMREG-SAPSSTVI 453
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A835ZCC3_9STRA (Nuf2 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC3_9STRA) HSP 1 Score: 229 bits (583), Expect = 2.510e-66 Identity = 148/374 (39.57%), Postives = 223/374 (59.63%), Query Frame = 1
Query: 25 YSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKRSEFAARSSEKAELQRKLVRFDEKLAHLRKQAAFKTDAMAEEIEAIKAAIAENE 1146
YSFP L +K I+ L L I SE+ L NP+++VQ+V +F +LVE T+GVT+EEM+QPVFAGL L Y +LH++S+ LA FR V +M+ S + DFS D+ PN RL+RQLSAVINF F+EG+ +Y +K+ L A + + N++L+ E + +R +++ E V A A + L + +R +K+ N +KDR+A A +E++ LQAQ+VSSP RI RE++D Q ALEQE E A K+ Q + + + A RE+ KAT +++ EL +Q+ A +EV+ Q + E ++ AA +++ A L+R R DEKLAHLR+Q + +A + A++A +AE E
Sbjct: 18 YSFPTLKAKLILERLQQLQIPTSEETLDNPQKNVQEVQNVFAKLVEFTMGVTREEMNQPVFAGLNVLNYAQLHEDSVPELAFFRAVSKMMTASCVHDFSFNDLQTPNKTRLKRQLSAVINFCMFREGRMQVYNALATEKENLLANVQALGEDNERLERELASLTERTSQEAAETEMVEADCRAMEAQISALNREQAATRAQSGDLKRQANGLKDRLAALDLETKEAIMERERLQAQIVSSPDRIRREMADQQAALEQERTEGMAAEKQAQRTELTAANVARAEREVVKATRALDDIEEELGRQKEALREVRAAQRALAENGAKSAAAAADAAVLRRHAARLDEKLAHLRRQGRARAEAADASLAALRAELAEEE 391
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A4D9D8Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8Z4_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.910e-36 Identity = 106/360 (29.44%), Postives = 183/360 (50.83%), Query Frame = 1
Query: 22 AYSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKRSEFAARSSEKAELQRKLVRFDEKLAHLRKQAAFKTDAM 1101
A+SFP+L + I+ + +L + ++E + +H + +E LVE G+TKEEMSQP F+G+ L YPELH+ESI LA FR +M+ + + DFS+KD+ P PKR+RR LSA+INF +F+E + +Y + K+ L + Q + E ++++ A +R+ +E + E A+ +L K R A +KK + ++K+ + A +AL E++ + Q+V SP+R+ RE++ + +E E E A + + + V + +E+ KA +K+ + R + E L+R+ RF+++ HLRK K +A+
Sbjct: 691 AFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAEREEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKAXXXXXXXXXXXXXXXXXXXXLKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDEAL 1050
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: W7TPN5_9STRA (Kinetochore protein Nuf2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPN5_9STRA) HSP 1 Score: 149 bits (375), Expect = 5.530e-36 Identity = 124/446 (27.80%), Postives = 217/446 (48.65%), Query Frame = 1
Query: 22 AYSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKRSEFAARSSEKAELQRKLVRFDEKLAHLRKQAAFKTDAM---AEEIEAIKAAIAENEKHYEEARARMEESKAILEQHQQEKENVETEMANNVAGTKHLLTQVGIITRTHAQRLQAAMREGPNTNS 1350
A+SFP+L + I+ + +L + ++E + +H + +E LVE G+TKEEMSQP F+G+ L YPELH+ESI LA FR +M+ + + DFS+KD+ P PKR+RR LSA+INF +F+E + +Y + K+ L + Q + E ++++ A + + +E + E A+ +L K R A +KK + ++K+ + A +AL E++ + Q+V SP+R+ RE++ + +E E E A + + + V + +E+ K K+ + R + E L+R+ RF+++ HLRK K +A+ +E +A A+ + + +++A +ES+A + + E E + E A A L + H Q L+ A+ G TN+
Sbjct: 37 AFSFPILKTPDILQCMHELQVRLTEAEINEADKHRDAIRRAYEYLVEICTGITKEEMSQPAFSGINALNYPELHEESIPELAFFRACTKMMTVCGVHDFSMKDLLSPEPKRVRRHLSAIINFAKFREERLVMYSELAVKRDELLDNLKRLQDEEVGVAKELGVLREQAAAESEEMEGLEQACEVAEAELEQLNKRQAEIRAQGAELKKQSQDLKESIGKASSALESGIEEREKTRGQIVRSPERVRRELASAAEEVETEKKEGLATERDAREMHLRVQAVQKGEKEVGKXXXXXXXXXXXXXXXXXXXXXXKDATKNVQGNRQRVLEAAQEMENLKRQASRFEDRWTHLRKSGKAKDEALEVAGKEAQAQLLAVEKVRRAHQQA---ADESEADVARVTAEVEGEKQENAARCAEMVEALKSLSETVAEHQQGLREAL--GDTTNA 477
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A7R9U8B6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B6_9STRA) HSP 1 Score: 139 bits (351), Expect = 3.920e-34 Identity = 102/318 (32.08%), Postives = 170/318 (53.46%), Query Frame = 1
Query: 22 AYSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEK-------RKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEV 954
A+SFP+L+++++ + DL I + E+ LA P +H V FE +E VT+EE++QP F+GL L YPELH+ESI LA FR VG+++ + DF++ D+ P+PKRLR+ LSA INF +F+E + L+ + ++ +A AQQ LQ E D +++ AE+ R A E + + E + L G SRE K+ N K+ +A + L +++ L++QVV SP R RE+S+ +++L KK + + + A+ + K +++ A E +++ A +E+
Sbjct: 5 AFSFPILSARELCLCMTDLQISLPEEALAEPSKHKDAVRRCFEAFIELCTDVTREELNQPAFSGLEALNYPELHEESIPALAFFRAVGKLMHTCGVSDFTIGDVLSPSPKRLRKCLSAAINFAKFREERLLLFTELTEERASTMETLAAAQQEKAALQAELDRLKELTAEEDAEIHAERSACESLAEEIEVLNREQARLK---GESREK----KQLTTNRKEVLAKLVSQLENLAEDRERLRSQVVRSPARERREMSEAEESLXXXXXXXXXXXKKAKWTAARLAALQGAQDAVQKCAELLDDIAAERTREDEALQEL 315
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A7S0CD28_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CD28_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.400e-33 Identity = 119/422 (28.20%), Postives = 213/422 (50.47%), Query Frame = 1
Query: 25 YSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQP---VFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKRSEFAARSSEKAELQRKLVRFDEKLAHLRKQAAFKTDAMAEEIEAIKAAIAENEKHYEEARARME----ESKAILEQHQQEKENVETEMANNVAGTKHL 1269
YSFP+L + +I+ + DL I + E L P H + +F L+E+ +G+TK+ ++ P + L +P+LH +S L + ++++ I DF +KD+ P KRLRRQLSA IN +R+KE K ++Y ++++L A + Q+ N+ L + ++ + A + AIE+V + E + K R+ +KK N++KD++AT A+ AE E++ L +V SPQRI +++ + + LE E E + ++ +QS+ + A+ ++ +AT +EE + E K +S EV + I + S E R++ +++ +RKQ+ K + + ++A EK +E ARM+ E K + E +E+ +E E+ N V K +
Sbjct: 10 YSFPLLKNAEILTSMSDLGISICENELLEPHRHKDAIRHVFLGLIESGMGLTKQHLATPNDDAKKFIESLPFPDLHVDSAGELKFIKCSMKLMKSCGIHDFGIKDLHAPTAKRLRRQLSAAINLMRYKEDKINVYTMLHEEREKLIADLQQVQEENEMLNQQFEETKVESANEWNAIEEVENECEEIESEIAVQNKLQASIRQESGLLKKKANDLKDKIATISLAIQDAESEERKLATGIVKSPQRIKTDMAGITKTLEIEREECQKAKREALAGRQSIANITKAKEDVIQATYLMEEVSGERSKHKSVIDEVDVAKCSIEGNEKKIREFESRSKECVREIDFLEKEAISIRKQSEIKLNEQRQAYHDAGLSLAAVEKGRKEQLARMDAHEVELKELEEARSKERLEMELEIKNMVQAYKDM 431
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A5D6Y8F7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8F7_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.540e-33 Identity = 113/336 (33.63%), Postives = 180/336 (53.57%), Query Frame = 1
Query: 4 ADGADVAYSFPMLNSKKIVGYLGDLNIHVSE-QMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAE-------KRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKR 987
A GA V YSFP+L +I + ++ I V+E ++ A +++V +F +E+ G T+EE++QP FAGLG LTYPELH+ESI LA FR R++ + DF LKD+ P PKR+RRQLSA+INF +F+E + +A L +R LQD ++ +Q ++AE + AI +V A+ A + L K + R +K N +++D +A+ Q + AE E + L+ ++VSSP R+ +E+ + ALE EV A ++ + L + A +++ K + A ++RK + A +VK +I E R
Sbjct: 26 AGGAQV-YSFPLLKPSEIFACIREMQIPVAEDEIRACEPVAIRKVLEVF---IESIAGATREELNQPAFAGLGALTYPELHEESIPELAFFRAAARLLSACGVYDFGLKDVQTPTPKRVRRQLSALINFAKFRE-------ERLAAFGELTRDTDQLLKRKSALQDTNEQLQRQLAELLREGEVEAPAIRQVSAETAALEAEINVLNKRQAVMRHETGELKTKNADLRDEMASYQFHILEAEKEFERLRGKIVSSPARVKQEIESIAVALEAAKEEVGAMERRHRELLAYSDMFARADKDMVKTIELMRAAEQDVRKCKDAKAQVKLQTREIEENR 350
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A830HQ31_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HQ31_9CHLO) HSP 1 Score: 139 bits (351), Expect = 4.680e-33 Identity = 114/385 (29.61%), Postives = 191/385 (49.61%), Query Frame = 1
Query: 19 VAYSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQPVFAGLGCL-TYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHV--------------KKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIHEKRSEFAARSSEKAELQRKLVRFDEKLAHLRKQAAFKTDAMAEEIEAIKA 1128
++YSFP+L + +I+ L +L++ +SE L P + + ++E + GV++EEM P F + L +PELH+ES+A LA RN+ +++ S + DFSLKD+ P+ RLRR LSA+INF +F+E K Y++ Q+ + ++ + + AE R I ++ A H+A T E+ + R +A + + D+ A+ L+R E K LQ VV+SP ++ RE+SDL+ A+E+E V K + L + A RE+ K +EEA +E++K + + VK+ Q K+ E E ++ ++R+ E+L L KQ K ++ A + KA
Sbjct: 1 MSYSFPILTNAEILACLSELDVPLSEVELTKPGYEIARP--MYESITVLLCGVSREEMQTPAFNAIASLGDFPELHEESLANLAFVRNLVKLLEASGVSDFSLKDIYKPDYTRLRRNLSAIINFAKFREEKLATYVEL--------------QEEAEATLEKKAALDAKAAELRAEIARIRASHQAEASQTAEVLEAAENLRTQVADAXXXXXXXEAANETTRSSIAALADKTNAAKDELSRHEARKAFLQDSVVTSPDKLTREISDLENAIERERTSVGELDKTLRNLNHKGDLYAKASREIGKCVKLMEEAESEIKKHKEVSRSVKSIQAKLGENEEEVFKLTAAANHMKRQESALSERLTRLGKQGNLKKESAASALNEAKA 369
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Match: A0A7S0CBJ8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBJ8_9STRA) HSP 1 Score: 136 bits (342), Expect = 4.510e-32 Identity = 102/336 (30.36%), Postives = 178/336 (52.98%), Query Frame = 1
Query: 25 YSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFERLVETTLGVTKEEMSQP---VFAGLGCLTYPELHDESIAFLALFRNVGRMIRISRIEDFSLKDMSDPNPKRLRRQLSAVINFVRFKEGKEHLYLDAMAKKQRLAAGIAVAQQRNQKLQDEHDDIQDRMAEKRKAIEKVVAKHEAAKQATVELTKNVGISRENLAHVKKDNNNIKDRVATAQAALNRAELEKKTLQAQVVSSPQRIVREVSDLQQALEQELAEVEAETKKTQTLKQSVVVMGNARRELNKATVNIEEAATELRKQESAFKEVKNTQYKIH---EKRSEFAARSSE 1014
YSFP+L + +I+ + DL I + E L P H + +F L+E+ +G+TK+ ++ P + L +P+LH +S L + ++++ I DF +KD+ P KRLRRQLSA IN +R+KE K ++Y ++++L A + Q+ N+ L + ++ + A + AIE+V + E + K R+ +KK N++KD++AT A+ AE E++ L +V SPQRI +++ + + LE E E + ++ +QS+ + A+ ++ +AT +EE + E K +S EV + I +K EF +RS E
Sbjct: 10 YSFPLLKNAEILTSMSDLGISICENELLEPHRHKDAIRHVFLGLIESGMGLTKQHLATPNDDAKKFIESLPFPDLHVDSAGELKFIKCSMKLMKSCGIHDFGIKDLHAPTAKRLRRQLSAAINLMRYKEDKINVYTMLHEEREKLIADLQQVQEENEMLNQQFEETKVESANEWNAIEEVENECEEIESEIAVQNKLQASIRQESGLLKKKANDLKDKIATISLAIQDAESEERKLATGIVKSPQRIKTDMAGITKTLEIEREECQKAKREALAGRQSIANITKAKEDVIQATYLMEEVSGERSKHKSVIDEVDVAKCSIEGNEKKIREFESRSKE 345 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig84.16126.1 >prot_C-linearis_contig84.16126.1 ID=prot_C-linearis_contig84.16126.1|Name=mRNA_C-linearis_contig84.16126.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=456bp MADGADVAYSFPMLNSKKIVGYLGDLNIHVSEQMLANPKEHVQQVTMLFEback to top mRNA from alignment at C-linearis_contig84:631800..638699- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig84.16126.1 ID=mRNA_C-linearis_contig84.16126.1|Name=mRNA_C-linearis_contig84.16126.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6900bp|location=Sequence derived from alignment at C-linearis_contig84:631800..638699- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig84:631800..638699- >mRNA_C-linearis_contig84.16126.1 ID=mRNA_C-linearis_contig84.16126.1|Name=mRNA_C-linearis_contig84.16126.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2736bp|location=Sequence derived from alignment at C-linearis_contig84:631800..638699- (Chordaria linearis ClinC8C monoicous)back to top |