mRNA_C-linearis_contig84.16122.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig84.16122.1
Unique NamemRNA_C-linearis_contig84.16122.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: D8LMR9_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR9_ECTSI)

HSP 1 Score: 657 bits (1696), Expect = 3.170e-235
Identity = 339/354 (95.76%), Postives = 343/354 (96.89%), Query Frame = 3 
Query:  336 MADPGAPGPTTTAATVARLAHRETARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMMTPAS 1397
            MADPGAPGPTT+AA VARLAHRETARQTLPWVEKYRPSSL+ELVAHEDIV ILQKLI SNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKP QIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQK      VDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELP AVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATAR+MM+PAS
Sbjct:   35 MADPGAPGPTTSAAAVARLAHRETARQTLPWVEKYRPSSLEELVAHEDIVGILQKLIASNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQK------VDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPAAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARHMMSPAS 382
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: A0A835YQB5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB5_9STRA)

HSP 1 Score: 448 bits (1153), Expect = 2.830e-153
Identity = 223/326 (68.40%), Postives = 267/326 (81.90%), Query Frame = 3 
Query:  408 ARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMM 1385
            A  TLPWVEKYRPSSLDELVAHEDIVSIL  LI+SNKLPHLLFYGPPGTGKTSTILACA+KLYG  F  M LELNASDDRGIDVVR QIKEFAGTKRLFSSGVKLVILDEADAMT+DAQFALRRVIE++T+HTRFC+ICNYV KIIPALQSRCT+FRFAPL+P QI+ RL HV+  EKV  TP G +A++ LGQGDMRRVLNLLQSTHMA+ K      VDE   YL A APL  D++  +  L+T + +D  + +  +T  KGY++GD++ EL L+++++++PP V+ HLL+ +S+ E R+A GG+E+LQL +LVGAF  AR+MM
Sbjct:   25 ASSTLPWVEKYRPSSLDELVAHEDIVSILTTLIESNKLPHLLFYGPPGTGKTSTILACARKLYGPTFSSMTLELNASDDRGIDVVRDQIKEFAGTKRLFSSGVKLVILDEADAMTSDAQFALRRVIERHTRHTRFCLICNYVGKIIPALQSRCTRFRFAPLRPDQIRSRLAHVIASEKVDATPAGEQAILNLGQGDMRRVLNLLQSTHMAHVK------VDEDTVYLTAGAPLVSDVDAAQQWLMTGNIRDVVNLMQNMTVTKGYAIGDMITELTLRIIKLDMPPTVLAHLLEALSDIEHRMAFGGTEQLQLAALVGAFIIARHMM 344
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: A0A7S3UU54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU54_HETAK)

HSP 1 Score: 424 bits (1090), Expect = 9.320e-144
Identity = 215/328 (65.55%), Postives = 257/328 (78.35%), Query Frame = 3 
Query:  426 WVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMMTPAS*SAG 1409
            WVEKYRP++LD+LVAHEDIV +L KLIDSN+LPHLLFYGPPGTGKTSTILACA++LYG  F  MVLELNASDDRGIDVVR Q+KEFAGT+RLFSSGVKLV+LDEADAMT DAQFALRRVIEKYT+HTRFCMICNYVN++IPALQSRCT+FRFAPL+  Q+ GRLQHVV+QE V +T DG +A++ LGQGDMRRVLNLLQ+T MAY +  ++N       YL +  PL+EDM+ I   L     K  +D IL + ++KGY+L DI+ ++ + V   E PP VM  LL  +S+ E RLA G +ERLQLG+L GAF  AR  M     S+G
Sbjct:   22 WVEKYRPATLDDLVAHEDIVGVLNKLIDSNRLPHLLFYGPPGTGKTSTILACARRLYGKSFASMVLELNASDDRGIDVVRNQVKEFAGTRRLFSSGVKLVVLDEADAMTADAQFALRRVIEKYTRHTRFCMICNYVNRVIPALQSRCTRFRFAPLQHGQVVGRLQHVVEQEGVPLTEDGRQALLDLGQGDMRRVLNLLQATFMAYGEVTKQN------VYLTSGHPLEEDMDLIYQKLNNEDLKPTYDCILHMMSSKGYALTDILHDVGILVAATEYPPEVMCQLLIALSDIEHRLASGATERLQLGALAGAFQAARRAMMQEQSSSG 343
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: A0A7S2XZS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZS5_9STRA)

HSP 1 Score: 417 bits (1073), Expect = 2.300e-141
Identity = 205/323 (63.47%), Postives = 258/323 (79.88%), Query Frame = 3 
Query:  420 LPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMMT 1388
            LPWVEKYRP +LD+LV+ E I+SIL KLIDSN+LPHLLFYGPPGTGKTSTILACA+++YG +F  M LE+NASDDRGIDVVR QIK FA T+RLFSSG+KLVILDEADAMT+DAQFALRRVIE+YT+HTRFCMICNYV+KIIPALQSRC +FRF PL+  Q+Q RL  V+D+E V ITP+G E++++ G GDMRR+LNLLQST MAY +      V     +L + +PL +D+E + + LL +SFK+++  IL L   KGY+L D++ EL + V  ++LPPAV+  LL E+SN E RL+ G S++LQLG+LVGAF   +YMM+
Sbjct:   14 LPWVEKYRPETLDDLVSQEAIISILNKLIDSNRLPHLLFYGPPGTGKTSTILACARRIYGKNFSSMTLEMNASDDRGIDVVREQIKNFASTRRLFSSGMKLVILDEADAMTSDAQFALRRVIEQYTRHTRFCMICNYVSKIIPALQSRCMRFRFGPLRSDQVQDRLNEVIDKEGVAITPEGKESILKHGNGDMRRILNLLQSTSMAYDE------VTLETVHLTSGSPLPDDVEAVLHQLLNSSFKESYQFILGLAVTKGYALADLLSELVVLVSRVQLPPAVLCPLLSELSNIEYRLSSGASDKLQLGALVGAFVKGKYMMS 330
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: W2G592_PHYPR (AAA domain-containing protein n=18 Tax=Peronosporaceae TaxID=4777 RepID=W2G592_PHYPR)

HSP 1 Score: 403 bits (1036), Expect = 1.920e-135
Identity = 197/335 (58.81%), Postives = 257/335 (76.72%), Query Frame = 3 
Query:  390 LAHRETARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMMTPA 1394
            ++ R  + ++ PWVEKYRPSSLD+L+AH++I+S L +LID+ KLPHLLFYGPPGTGKTS I+A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL  +Q+ GR++H+   EK+ +T DG +A++RLGQGDMRR+LN+LQ+T MA+        V+E + YLC   PL +D+E +   L   +F  A     ++   KGY+  DI+Q++    ME+ELPP   ++L DE++N E RL++G +E LQL SLV  FA AR  M+ A
Sbjct:   18 ISSRNRSTESWPWVEKYRPSSLDDLIAHQEIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLIILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLNESQVSGRVKHIAQLEKLNMTEDGFKAILRLGQGDMRRILNILQATSMAHDV------VNEANVYLCTGNPLPKDIESVTQWLFNENFATAVRKCAEMQKLKGYATSDILQDVYRYTMELELPPRCRMYLYDELANLEHRLSNGTTEELQLASLVAIFAIAREQMSTA 346
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: A0A484DYU8_BRELC (AAA domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYU8_BRELC)

HSP 1 Score: 400 bits (1028), Expect = 3.010e-134
Identity = 199/341 (58.36%), Postives = 258/341 (75.66%), Query Frame = 3 
Query:  390 LAHRETARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMMTPAS*SAGL 1412
            ++ R  + ++ PWVEKYRPSSL +L+AH+ I+S L +LID+ KLPHLLFYGPPGTGKTS I+A A+K+YG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKLVILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL  +Q+  R++H+V  EK+ +T DG +A++RLGQGDMRR+LN+LQ+T MA++       V+E + Y+C   PL +D+E I   L   SF  A    L++   KGY+  DI+Q++    ME+ELPP   ++L DE++  E RLA+G +E LQL SLV  FA  R  M+ A  +A +
Sbjct:   17 ISSRNRSTESWPWVEKYRPSSLSDLIAHQAIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARKMYGKNYSSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLVILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLNDSQVSDRVKHIVQLEKLNMTEDGFKAILRLGQGDMRRILNILQATSMAHEI------VNETNVYMCTGNPLPKDIELITQWLFNESFPTAVRKCLEVQKIKGYATSDILQDVYRYTMELELPPRCRMYLYDELAKLEHRLANGTTEELQLASLVAIFAITRNQMSNAVAAASI 351
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: H3G8T3_PHYRM (AAA domain-containing protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=H3G8T3_PHYRM)

HSP 1 Score: 398 bits (1023), Expect = 1.780e-133
Identity = 195/335 (58.21%), Postives = 255/335 (76.12%), Query Frame = 3 
Query:  390 LAHRETARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMMTPA 1394
            ++ R  + ++ PWVEKYRPSSLD+L+AH++I+S L +LID+ KLPHLLFYGPPGTGKTS ++A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL  +Q+ GR++H+ + EK+ +T DG  A++RLGQGDMRR+LN+LQ+T MA+        V+E + YLC   PL +D+E +   L   SF  A     ++   KGY+  DI+Q++     E+ELPP   ++L DE++  E RL++G +E LQL SLV  FA AR  M+ A
Sbjct:   18 ISSRNRSTESWPWVEKYRPSSLDDLIAHQEIISTLNRLIDAQKLPHLLFYGPPGTGKTSMMIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLIILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLNESQVGGRVKHIAELEKLNMTEDGFRAILRLGQGDMRRILNILQATSMAHDV------VNEANVYLCTGNPLPKDIESVTQWLFNESFPTAVRKCAEMQKLKGYATSDILQDVYRYTTELELPPRCRMYLYDELAKLEHRLSNGTTEELQLASLVAVFAIAREQMSGA 346
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: A0A2D4BMT8_PYTIN (Replication factor C subunit 5 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BMT8_PYTIN)

HSP 1 Score: 397 bits (1020), Expect = 5.410e-133
Identity = 196/335 (58.51%), Postives = 255/335 (76.12%), Query Frame = 3 
Query:  390 LAHRETARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMMTPA 1394
            ++ R+ A ++ PWVEKYRPSSL++L+AH++I+S L +LID+ KLPHLLFYGPPGTGKTS I+A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFSSGVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+TRFC+ICNYV+KIIPALQSRCT+FRFAPL   Q++ R+QH+   E++ +T DG +A++RLGQGDMRR+LN++Q+T MAY        VDE + Y+    PL +D+E I   LL   +  A     ++   KGY+  DI+Q++    +++ELPP   ++L DE++  E RLA+G SE LQL SLV  F  AR  M  A
Sbjct:   20 ISSRDRATESWPWVEKYRPSSLNDLIAHQEIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSSGVKLIILDEADSMTNDAQFSLRRVIEKYTKNTRFCLICNYVSKIIPALQSRCTRFRFAPLHENQVKDRVQHIAQLERLNMTEDGFKAILRLGQGDMRRILNIMQATSMAYDT------VDETNVYMTTGNPLPKDIETIVGWLLNEGYASAVQKCAEMQKLKGYATTDILQDVYKFTLDLELPPGCRMYLYDELAKLEHRLANGSSEDLQLASLVSVFFLARERMATA 348
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: A0A6G0WP14_9STRA (AAA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP14_9STRA)

HSP 1 Score: 396 bits (1017), Expect = 1.050e-132
Identity = 200/338 (59.17%), Postives = 256/338 (75.74%), Query Frame = 3 
Query:  372 AATVARLAHRETARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMM 1385
            A + A ++ +  +    PWVEKYRPSSL++L+AH DIVS L +LID+ KLPHLLFYGPPGTGKTS ILA A++LYG ++  MVLELNASDDRGI+VVR QIKEFAGTK+LFSSG+KL+ILDEADAMTNDAQFALRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRF+PL   Q++ R++H+   E V +TPDG +AV+RLG GDMRR+LN+LQ+T+MA+        V+E + YLC   PL  D+  + N L T SF+D     L+L   KGY+  D++ ++  K  E+ELPPA  +++ D++++ E RLA G SE LQL SLV  F  AR +M
Sbjct:    7 APSFAGISSKNRSTDNWPWVEKYRPSSLNDLIAHADIVSTLNRLIDAQKLPHLLFYGPPGTGKTSMILAAARRLYGNNYASMVLELNASDDRGINVVRDQIKEFAGTKKLFSSGIKLIILDEADAMTNDAQFALRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFSPLAEHQVKDRVEHIAKAENVNMTPDGFQAVLRLGGGDMRRILNILQATNMAHDV------VNEANVYLCTGNPLPADITAMCNWLWTESFEDCVRQCLELQKLKGYATMDLLDQVYNKTNELELPPAARMYIYDQLAHLEHRLATGTSETLQLMSLVSVFIVARQLM 338
[Close]
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Match: M4BQG7_HYAAE (AAA domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQG7_HYAAE)

HSP 1 Score: 393 bits (1010), Expect = 1.820e-131
Identity = 192/332 (57.83%), Postives = 250/332 (75.30%), Query Frame = 3 
Query:  390 LAHRETARQTLPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAFATARYMM 1385
            ++ R  + +T PWVEKYRPSSL +L+AH++I+S L +LID+ KLPHLLFYGPPGTGKTS I+A A++LYG ++  MVLELNASDDRGIDVVR QIKEFAGTK+LFS GVKL+ILDEAD+MTNDAQF+LRRVIEKYTK+ RFC+ICNYV+KIIPALQSRCT+FRFAPL  +Q+ GR++H+ + EK+ +T DG +A++RLGQGDMRR+LN+LQ+T MAY        VDE + Y C   PL +D+E +   L    F  A     ++   KGY+  DI+Q++    M++EL P   ++L DE++  E RL++G +E LQL S+V  FA  R  M
Sbjct:   16 ISSRNRSTETWPWVEKYRPSSLSDLIAHQNIISTLNRLIDAQKLPHLLFYGPPGTGKTSMIIAAARRLYGKNYGSMVLELNASDDRGIDVVRNQIKEFAGTKKLFSQGVKLIILDEADSMTNDAQFSLRRVIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFAPLDESQVSGRVKHIAELEKLNMTDDGFKAILRLGQGDMRRILNILQATSMAYDV------VDEANVYFCTGNPLPKDIELVVQWLFNEKFATAVHKCAEMQKIKGYATSDILQDVYRYTMDLELSPRSRMYLYDELAKLEHRLSNGTTEELQLASMVAIFAIVRDQM 341
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMR9_ECTSI3.170e-23595.76AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YQB5_9STRA2.830e-15368.40P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3UU54_HETAK9.320e-14465.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZS5_9STRA2.300e-14163.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W2G592_PHYPR1.920e-13558.81AAA domain-containing protein n=18 Tax=Peronospora... [more]
A0A484DYU8_BRELC3.010e-13458.36AAA domain-containing protein n=1 Tax=Bremia lactu... [more]
H3G8T3_PHYRM1.780e-13358.21AAA domain-containing protein n=5 Tax=Peronosporac... [more]
A0A2D4BMT8_PYTIN5.410e-13358.51Replication factor C subunit 5 n=2 Tax=Pythium Tax... [more]
A0A6G0WP14_9STRA1.050e-13259.17AAA domain-containing protein n=1 Tax=Aphanomyces ... [more]
M4BQG7_HYAAE1.820e-13157.83AAA domain-containing protein n=1 Tax=Hyaloperonos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:607496..616758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score660.6
Seed ortholog evalue4.4e-187
Seed eggNOG ortholog2880.D8LMR9
Preferred nameRFC5
KEGG koko:K10756
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000228,GO:0000278,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005657,GO:0005663,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0019899,GO:0022402,GO:0022616,GO:0030554,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031347,GO:0031348,GO:0031389,GO:0031390,GO:0031391,GO:0031974,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034641,GO:0034644,GO:0034645,GO:0035639,GO:0036094,GO:0042623,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043599,GO:0043601,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0061860,GO:0065007,GO:0065009,GO:0070013,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0090304,GO:0090329,GO:0090618,GO:0097159,GO:0097367,GO:0098813,GO:0104004,GO:1900262,GO:1900264,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:1902296,GO:1902319,GO:1902494,GO:1902969,GO:1902983,GO:1903047,GO:1903460,GO:1904949,GO:2000112,GO:2000278,GO:2000573
EggNOG free text desc.DNA replication
EggNOG OGsCOG0470@1,KOG0990@2759
Ec32 ortholog descriptionReplication factor C
Ec32 orthologEc-02_003410.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Exons10
Model size1432
Cds size1131
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16122.1prot_C-linearis_contig84.16122.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig84 607528..616489 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930638.8670745-UTR-C-linearis_contig84:607495..6075271622930638.8670745-UTR-C-linearis_contig84:607495..607527Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 607496..607527 -
1690881173.0450928-UTR-C-linearis_contig84:607495..6075271690881173.0450928-UTR-C-linearis_contig84:607495..607527Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 607496..607527 -
1622930639.0598073-UTR-C-linearis_contig84:616489..6167581622930639.0598073-UTR-C-linearis_contig84:616489..616758Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 616490..616758 -
1690881173.1984072-UTR-C-linearis_contig84:616489..6167581690881173.1984072-UTR-C-linearis_contig84:616489..616758Chordaria linearis ClinC8C monoicousUTRC-linearis_contig84 616490..616758 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930638.8843892-CDS-C-linearis_contig84:607527..6075521622930638.8843892-CDS-C-linearis_contig84:607527..607552Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 607528..607552 -
1690881173.0623083-CDS-C-linearis_contig84:607527..6075521690881173.0623083-CDS-C-linearis_contig84:607527..607552Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 607528..607552 -
1622930638.8991795-CDS-C-linearis_contig84:609516..6096681622930638.8991795-CDS-C-linearis_contig84:609516..609668Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 609517..609668 -
1690881173.0766022-CDS-C-linearis_contig84:609516..6096681690881173.0766022-CDS-C-linearis_contig84:609516..609668Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 609517..609668 -
1622930638.914208-CDS-C-linearis_contig84:610167..6102331622930638.914208-CDS-C-linearis_contig84:610167..610233Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 610168..610233 -
1690881173.0905628-CDS-C-linearis_contig84:610167..6102331690881173.0905628-CDS-C-linearis_contig84:610167..610233Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 610168..610233 -
1622930638.9333389-CDS-C-linearis_contig84:610527..6106201622930638.9333389-CDS-C-linearis_contig84:610527..610620Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 610528..610620 -
1690881173.101869-CDS-C-linearis_contig84:610527..6106201690881173.101869-CDS-C-linearis_contig84:610527..610620Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 610528..610620 -
1622930638.9532115-CDS-C-linearis_contig84:611079..6112031622930638.9532115-CDS-C-linearis_contig84:611079..611203Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 611080..611203 -
1690881173.1143098-CDS-C-linearis_contig84:611079..6112031690881173.1143098-CDS-C-linearis_contig84:611079..611203Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 611080..611203 -
1622930638.9789283-CDS-C-linearis_contig84:611661..6118211622930638.9789283-CDS-C-linearis_contig84:611661..611821Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 611662..611821 -
1690881173.131683-CDS-C-linearis_contig84:611661..6118211690881173.131683-CDS-C-linearis_contig84:611661..611821Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 611662..611821 -
1622930638.9938588-CDS-C-linearis_contig84:612442..6125961622930638.9938588-CDS-C-linearis_contig84:612442..612596Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 612443..612596 -
1690881173.144463-CDS-C-linearis_contig84:612442..6125961690881173.144463-CDS-C-linearis_contig84:612442..612596Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 612443..612596 -
1622930639.0111043-CDS-C-linearis_contig84:613047..6131811622930639.0111043-CDS-C-linearis_contig84:613047..613181Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 613048..613181 -
1690881173.1588278-CDS-C-linearis_contig84:613047..6131811690881173.1588278-CDS-C-linearis_contig84:613047..613181Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 613048..613181 -
1622930639.0284343-CDS-C-linearis_contig84:613678..6138681622930639.0284343-CDS-C-linearis_contig84:613678..613868Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 613679..613868 -
1690881173.1762736-CDS-C-linearis_contig84:613678..6138681690881173.1762736-CDS-C-linearis_contig84:613678..613868Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 613679..613868 -
1622930639.0446584-CDS-C-linearis_contig84:616456..6164891622930639.0446584-CDS-C-linearis_contig84:616456..616489Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 616457..616489 -
1690881173.1866474-CDS-C-linearis_contig84:616456..6164891690881173.1866474-CDS-C-linearis_contig84:616456..616489Chordaria linearis ClinC8C monoicousCDSC-linearis_contig84 616457..616489 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig84.16122.1

>prot_C-linearis_contig84.16122.1 ID=prot_C-linearis_contig84.16122.1|Name=mRNA_C-linearis_contig84.16122.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=377bp
MSSANDPMEVEVKDSKGKGKSRMADPGAPGPTTTAATVARLAHRETARQT
LPWVEKYRPSSLDELVAHEDIVSILQKLIDSNKLPHLLFYGPPGTGKTST
ILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVK
LVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCT
KFRFAPLKPAQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLL
QSTHMAYQKAREKNGVDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFD
GILKLTTAKGYSLGDIVQELALKVMEIELPPAVMVHLLDEMSNTEERLAH
GGSERLQLGSLVGAFATARYMMTPAS*
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mRNA from alignment at C-linearis_contig84:607496..616758-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig84.16122.1 ID=mRNA_C-linearis_contig84.16122.1|Name=mRNA_C-linearis_contig84.16122.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9263bp|location=Sequence derived from alignment at C-linearis_contig84:607496..616758- (Chordaria linearis ClinC8C monoicous)
GGCTGTGGGTGTGCACTGCTGCTATTCTCTCACAGCAGACCCAATATCAT
CGGCTTGTCGCTCGCTGATACTCAATTATTATCGTGCGCGTAACGTTCAA
GGCTGCCTGTGAAATTCTGCTGAGCCGGGAGCGAGGAGAGTCTACGGAGA
CTTTTGTTCTATCCGTCTGTGTCCCCGCACACACATCGCGGACCTTGGCA
GCAGCGCCCGTGGAACCGCGGAGAGGAAATAGCCTGCACTAAGTCACGCT
CGCGCAAGATTTTTGAACGATGTCGTCTGCAAATGACCCGATGGAGGTCG
AGGTGAGTTGATTTACCGAAAGCTAGTTCATCGTTGTACACACAAGTATC
ACGCAGGAGTCACCCACATAACCTCGCGCGCGCGCGCTCTCGCGTGTAGG
TGTAGCCAGGACCATCGTTCCGCCCCGCTCAATGTTTAGCAAGAGCCTTC
GCAAGCTTGTGCTTCACTTGCACCATCGAACCTCTCTCGTTGACCGTCAC
TGCTGTCGGCTTACATTTTTACGCCAAAATCGACGTCTGGTCGACAAACA
AATTTGAATTTCAAAAAGCTCCTCTCAAGTCAACCACGCATCACATGTTG
TTCAGTTTTCGACACCAAACATATGAAAATGGGTGCTGCCTTGGCAGCGC
CCTCACACGAAGTTATACATGGCCCATGGGAGCCTTCCCGGCGCAGCTCA
TGTGAGATGTCAATGCTCAAGCTTCGGGCTACGATTGGGGGGGGGTGGTA
TACTGCGTACTGTAGGTCTGTAGGTCCACACCGCCGTCAGCGCCCTTAAA
CGGCATCAAAGAAAGAACCTCCCCTCGAAGAGACAAATCTCTAAGCGGTG
GATTAACACCGATGGTTTATGGCAACAAAATCTCAAATCTAAATCTTGAT
TTTTGATGGGGGGGGGGTCGAACCAAGAAAAATATTTTGATGTACGCTCC
TTATGGGGCCAAATCTTGCCAAGATATCTTGGCAAGATTTGAAATGACAA
CAAGGAACCCCCTTTCTCCCCAATATTCAGCCAAGATCGGGGAGACAGCA
GGCCTTGTCAAATCTTGTTTGGCGGGGGGGTGCGACGAGGCCCAATCGAT
ACAATCAGCGAGTGCGACCTGAGTTCTTAACATATCACTCTCCTCAAGGG
CTCCGAACAACCCTAGGCTTAAGGTCTAGCTATTGTACACGCTGGTTGGT
GATGATTGCTTGCGAGGCGAGCGTGAAAAAAACATTTCGCACCATATCAT
ACCAAAAACGAACGAGTCAAACCGCCTCCAGAGAGCAAAAATGGCAGCCT
TTTGGCGGAGACAGGAGGACACTGCATTCGATTTCTCGCTCGCTAGAGCA
CGGATCGCCGTAGAACCAGGCAGGATGTCACCTCTGTTCCCTATCATTCT
TCGGTGGACGGTGGCTTAGTAGGTTGTTCACGCATTCGACAGATAGAAGG
TCGCGCGTGGTGTAAGTTGCATTTTCGAAATGAAAATAATCCTGTTTTTT
CTCACTTGAAAATAGAGTGGTTTGTTGAAGGGCGGAAAATCGATTTCAGC
AGACAGCTTGTGTGCACGCACATGCTTCTCTCTGTCGAATGCGTGAACAA
CCTGCTAAGCCACCGTCCACCGAAGAATGATAGGGAACAGAGGTGACATC
CTGCCTGATTCTATGGCGATCCGTGCTCTAGCGAGCGAGAAATCGAATGC
AGTGTCCTCCTGTCTCCGCCAAAAGGCTGCCATTTTTGCTCTCTGGAGGC
GGTTTGACTCGTTCGTTTTTGGTATGATATGGTGCGAAATGTTTTTTTCA
CGCTCGCCTCGCAAGCAATCATCACCAACCAGCGTGTACAATAGCTAGAC
CTTAAGCCTAGGGTTGTTCGGAGCCCTTGAGGAGAGGGATGCGTTAAGAA
CTCAGGTCGCACTCGCTGATTGTATCGACCGAAAGTGCATTGTATGCCCC
CCACCCCCTATCAAGATTAAGATGCTGTTTTCCATACACACGTACACGAC
AAATCTTGATCTTTGGGTAGGGTAGATAAATCTTGGCAAGATTTGGAAAA
GTCAAGATTGAGATTTTTTTGCCGTAACCAGTGGTGTAACAGTTGAATAT
CCCTTTTGTTGTCCCAGGGAAGACGGTTACGTTCAGAGTCCACCAGATGC
ACGTCTTTCTAGATGCCGTTGGAGGATATACCCGGTGTTTTTCATTTACT
CCGTATAATGGTTCTTGTACAATGCACGTCACTACTGCTGCTCCACGCAC
TTCACGAGTCAGTGCTATGTACGTCTGCTCACAGCAGCTATAGGAGGATA
TACCCGGTGTTTTTTCATATGTAAGGGTTCTCGTACAATGCACGTTATTG
TGCTCCACGCACTTCACGAGTCGGCAATATGTGCGTCCTGCTACAGCAGC
TACTTTCTGCTGCTGTACAAGCTCGCTCTCCTGGCGGAAAACACCACCAT
AAACAGGCTCTGCACAGGCTATCCTGCAAACTTACCGCTACATATCCCCG
GGAGCTACGGTAGACTGTCAACTGACACGGCACGGCGGTCGTGCTGGGTG
TCGCTACATTCGCTTTGCCCCCTGGTACACGCTCCAAGTACTCGACTCCT
GCTGCATGGACGCGCATTTTCCAGGCTAGCGTAAGCTCGCTCACGCGCGT
GTAGGCACAGTATTGCAGTCTTCTTGACCTTCCAGTTTGTCCCCGACGGG
CCCAAACGTGAACAAAACAAAACAAAAACAAGCGTTTCAAGCAAACCGCA
CCTGTCCTAGCTGTGGTTTTCACTCGTGAGGATCCGAGGGCTCTCTCAAC
TATTTAACACCTTCTTATCTCTGTCCTCTTAACACGCACCGGCGATACAT
ACCGTACATAAATGGCTGCTTCTTCTCCTCGCCGACGAAGGTGAAGGACA
GCAAGGGCAAGGGCAAGAGCAGGATGGCAGACCCGGGGGCACCAGGGCCG
ACAACGACCGCCGCCACCGTGGCCCGCCTGGCGCACCGCGAGACGGCGAG
GCAGACGCTGCCGTGGGTCGAGAAGTACCGACCCTCGTCGCTCGACGAAC
TCGTCGCCCACGAGGACATCGTCAGCATCCGTGAGTGTTGCCCCCAGATT
TTTTGTTTTTTCCCCCTCACTGAAGATTTTCGCGTGGCGTCACCTATGAC
GCATGCACGTATTTATTTTGCGTGTTCATTGTCCCGTTCCGAATATAGCT
GATGTCTTTTGCCCTCCCTGTAGTATCGTTTCGCCCACGAACAAAACTGG
CGTCGGCCGTAGGCTTACACGATAGGGTTCGTGGGCATCAGCTAACGAAA
ACGCCAACTGCGTCGCGCCTGCCTACAAAGCACTATCTAGAAGTTCGCAG
CAGCGGCGGACGCAGGAGGTTTCATCTTCTCGCTCATGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCAGCAGC
AGCAGCGGTCATCGTTAGCTCTTGGAGCGTTTTGTTTTCCCTCTATTTTC
GTGCATACATGTGCGCGACCACATTCTGTTGAGGGCCTGATGCTTCTTCG
GTGTCTTGACTGACCATTCACCCGCAGTCCAAAAGCTCATCGACAGCAAC
AAGCTGCCTCACCTGCTGTTCTACGGTCCCCCCGGGACGGGAAAGACCTC
CACGATCCTGGCCTGCGCAAAAAAGCTGTACGGCGCCGACTTCAAGATGA
TGGTTCTAGAGGTGTGTGTTCGTGTGCTCCGTATTGTAGAGGGTGTATTG
GGTGCGGTGGATTCGCTCGCCTTTCGGTCGCTTCTTTTTGTGGGCGCGTG
GCATGCACGCGCACTTCCTTTCCCTCGGAGCTCAGGCGTGGGAACGAAAC
ATGACGTTCGATGGCAGCGCCGGCGCGAGTAGGACGCCGGATTTTGAGCG
AGATCGGGGGGGGTCGTGGGTTGTGTTATGTGTCGCGCCACGATCTGTCT
CGACTCGACAGGTTTCAAAAAGGTATCATGCGTGCGAGGAAGGGTGGGTC
CAACCGTCCCATCCATGTGCCCCCCGGCTACGTGGATACATTCTTCATGT
CACGGTGCCTCCCCCCGCTGCCCCCCATTGATCACGCCACCGTTGTCTCT
CCCATCGTTTGCACGTGCCACGCACCTCTTGTCTCTCCCGACCCGCTATC
TCGGGTGAAAAGCTCAATGCGTCGGATGACCGAGGCATCGACGTTGTGCG
AGGCCAAATCAAGGAGTTCGCGGGGACGAAGCGGCTCTTCAGCTCCGGCG
TGAAGCTGGTCATCCTGGACGAGGCAGACGCCATGACCAATGACGCGCAG
TTTGCGCTCCGCCGAGGTATCAATCAAGGCTTGCCCTGCCTTCATTTTTT
TTATTGTTTGTTGGTGTCGTTCCCTTTGAACTGGGAGGCAGGCGCGATAA
GTCGTTGCTGTTGCCGCCGCCGCCAACGCGCGAGCGCTTTGTGAACAAAG
CGAGTTCAGCGTCGTGTTTACTTCGCGAGAGGTCCGCCCACACCTCGCCC
AGAACATGGCTTTCTGAACAATGTCAACTCAAGTTGACCTGGCCTGCGTA
AGCACACACCAAGTCACCTCAACCTGTCTTCAACCAGGAATTTCACTGAT
TGCTTCCATGTTTTTTAGAACGTCGCTCGTGCCGTAGCTGCAGCTCGAGG
GTTTCGAGACGGCGTCAAATCCGGTGGTGTGTTTACGGAACGCGCCTGAG
GGGGTGGGGGGGGGATCCCGTGTCACATTTCCAGGCAAAGTTGGTAGGCA
ATCGGTCCAAATCTCTTGTGTCGTACTCGGCACACTTGCTTTGCCCCCTG
TACTATTCGCACACCATTGTTCCGGCTCGACGTATTGTTCCCGGGCGTTT
GAGGTTCGGTAGCTACAGCGGTAGTCTCGAAACGCTCCCTTCTATTCTCC
ATTCTCCGGTGCTGTTGTATCCTCTCCCTCGCTCCAGTCATCGAGAAGTA
CACGAAACACACGCGGTTCTGCATGATCTGCAACTACGTGAACAAGATCA
TCCCGGCGTTGCAGTCGCGGTGCACCAAGTTTCGGTTCGCCCCGCTCAAG
CCCGCGCAGATCCAGGGTCGCCTGCAGCACGTGGTGGACCAGGAGAAGTG
AGCTGTTGTAGCAATGTGCAATGTTCTGTGTGTGTTGTTTCTCTTATTGC
AATGTTCAATTTTGTGTGTGTGTTGTTTTTGTTATTGCGATGTTTTTTGT
GTTGTGTGTGTGTTGTTTTTGTGTGTGTTGCTTGGTGACGGTGGTGGTGG
TGGTGGTGGTGGTAACGGTGGTGTTGTTTGCGACTGGAGACTTCCGCTAT
TTAGTTGGTGTTCGCACTGGCCGGCAGTTAGCTAGCGTTGTGAGTCTGGC
GTCAAAAGGAGCTCGTGCCTTACGCCACCGCCATGGACAGACAGCGTCCC
TTGAGGCTAAGTTCCAAAATTTAGTCGTTGACGGGTGTTTGGTTTGAGTT
GTTTACGCAACCATTCTTGCACCCAAGCAGCACCAACCCAACCCTACCGC
ACCCCGCTCGCACCCCCCTTCTGCGGCGTTTTTTCTCTTCACTTTCCGGT
CCTAGGGTGACGATCACCCCAGACGGCGTGGAGGCGGTGATGCGGTTGGG
GCAGGGGGACATGCGACGCGTCCTCAACCTCTTGCAGTCCACGCACATGG
CGTACCAAAAGGCAAGAGAGAAAAACGGAGTTGTTTATTTATTTTCTCGG
TGTCTACATAGAGCAGCGGTCTTGGAAGCAGTTTCCCTTTGCTCCGGCGC
GGCATTTTCGACCAAGCCAGGGTGACAAAGCGGAATGAAAAGGCAGGCTG
TGGCGCACAGGAGCGGCCCAAGAACGAGACAGCAGACGATTCAGTATCGA
GCCGAAAGCCAGCGAAACCACGCCTTTCGAGCTATTGTATGTACAAATGT
TTAGCTGCGGCGTCGAAGGCACTGCTGCTTGTAGCACAAAGCAAAGAAAC
ACCGGGCGCTTAAGTTTGCTTTTCGCTGGCAGCGTTTGCGACTTTTGTTG
CGCACTTTATCAGGGCCTTCTTTTTTCCAAGGCAAGAAGATAACTCGGGA
GTGCTGCTGCAGCACGTGGTTTGCGTTTCCATCCCTAGCAGTACTTTGAT
ATACCTCCCCCGCTCCCCCGCCGCCCCCGTGGCTCCAGGTGGACGAACGG
CACGCCTACCTGTGTGCGGCCGCACCCCTGAAGGAGGACATGGAGTACAT
CCGCAACGCCCTCCTGACGGCCTCTTTCAAGGTGAAGGAAGCTCTAAATA
CCTGTTTCACGTTGGTGCCTCCTCGCGCTTGTCAATCTCCTCCTCTCGTT
TCCGCGGGGAAATGTTAATGTTACCCCGTTGTCCCGCAGAGATGGCGATG
TTTTCGTCTTTCACATGAGCGCAACGTAAGTTAGCGCTCAGTCCTCCTAT
ATAGGTTATCTCTTGTGGGCGGTTGCTCCCCACTTCAAGAGTGCTGCGCC
CTTTCCTCCTCCTGCGGGCTGAGCTGAGCATGGGCGGGCGTGCATGTGGT
GCTTGTGTTGTTGTTTTTTTGCCAGGACGCGTTCGATGGTATCCTGAAGC
TGACCACCGCAAAGGGCTACTCTCTCGGGGACATCGTGCAGGTGTGCCTT
GCTTTCGCAAAAGTTCTCAAGCACAACATTGGGTCTTAGGGCAATACATA
CCTCGAAAGAGGATAAGAGACAGAGACAGAGGGGCAGGCTGGCAGACAAC
TTAGTAGGTAACATCTCTTGTAACCCACGCTTGATGGCCGAGAGCACGTG
GAGGCTCTTTTCCTGCAGTGGCTCCTCGACAGGGAATAGCTGATTCTGGT
TTGCTGTGCGTTTCATTGCTGTCAGAGTATAGCCACTCCATGTCCTGGGT
GGGGCACCGCAGCATAAGCGCAGTTGCCATGTTTGTATTTCGAGGGGTGA
CGAGGGGTGACGAGGGGTGACGCAGAGGGACATCCAAGTGTGCACTTCAT
GCGTATGATATGCACGACAAATGACTCTACAATCAACGCACCCAGCAGGA
ACGACTCCTTTCCTTTGTTTTCTCTCTTGTCTCTTGTTCGGTTTGTTTTT
TCTGTGCTTGTCCCCTCCTCTCCCCTCCTTCCCCCCGCAGGAGCTTGCGT
TGAAGGTGATGGAGATAGAGCTACCTCCGGCGGTGATGGTGCACCTTCTG
GACGAGATGTCCAACACAGAGGAGCGGCTGGCGCACGGGGGGTCGGAGCG
GCTGCAGCTGGGATCTCTCGTCGGAGCCTTCGCTACCGCCAGGTAATGGC
ACTTGCTAACGGGCTAACGGGTACACAGGTGGCCACTCGACCCCATTGTC
AGGGTATGTTAGGCGATGTCCTGGAGTATCAGATTGGATCACTTTTCCAA
CCGGTGCGCCCCAACCGTATGCCGGTTGGGCAATGTCGATTGCTGGTACG
TTGGGACGACATTGGGCAACTTCCACGCAATTGAGAAAAGGCAGTGTTCT
GTGTCGATGTGTGGGACAGCAGTCTCGACATACACGGGTGTACATAACCG
GTCGCCCCGGTGGTCTAGTAGGTACCGACGCAGTCTACTAAGCGCCAGCT
CATGGATTCGAGCCCCGACGAAGTGAGTTTTTTTTCTCGCTTTCGTTCCT
GGTACATTGAAAACTTGCTCACTTGGAAGCTTGTTAGTAAATACTACTTT
CGACTTCATTGTTGACGAAGGTGGGGAATGCTGAACCCTGCTTGCGATAA
AAAGCATCAAAGGCAGGCACCGCAGGAGGTAGGTGGAAACATCCCCTCCT
GTGTGACTCCGGATGATAGCCTAGCTAAATAGTTGTAGTGAAGAGGAGGC
AGGCTACGAAAAATACAGCAGCATGTTGCAAAAACAATAAAAATATGTAT
GAAAGCAAATGTACGAAAACAAAAGCTATACTAGCAAGAGATAAAGGCCC
GCCTGGTTAACTGGACTATTGTATTGTATAGCGAACTATTGTGAGAAGCA
ACAAACAAACAACAAACACCAAGAAGTGGTCGCCAGATCTGTGGGCCTCG
CCTCGCGGCATACCTGGCAGAATTTTGGCGACAAGAACAACAGGTGTGTC
CCTTTTTTTGATCGACAGTGCGAATAACAGGCGGTATGTTGTATAGGGTA
CAAGAGCGAAAAGCCACTGCTGTTTTGGTCTGCGCCAAACAGACAAAACC
TGCGGAATTTGCCCAATTTCGTGTTGTTTGCCCATTTTAGTTTTTTTTGC
AAAAAAAAACTCCAGTTCGTAAGCTATATGTATCCGTCAGTATTTTATTT
CTTTTTCGGGAAAAGTTCAAAGTTGCGCCAAAGGTATAAATTACCAGTAG
TTTTTTTTTTTTTTTTTTTAATTTCCCTGAATCTGCCGACGCGAGTTCGA
ATGATGTAGGTGACTGTTTTTTTCGGATCTAGCTCGGGCAGTCGAGAATT
TTGCGTGGACGGAGAAGAATCGTGAACCGATAGCATGCTCGACAGAGTGG
AGTTGACCATCATGCAAAGATCGGTCCGAAGAAACAGGTAGAATATTCTC
AAATGAGTGGTTGCCCAATGCCTTCACCAATGAAGGTGCACCCGGCAGGT
TGTACCCTAACCTTGGGCAACGAAACACCCAACGCGGTGGTTGTCAACAT
CCTCCCAACCACTTGCCCAAGGTTGGGTGCCTTGGGAGACAACTGCAATG
CCCCCCAACCCCCCAACCTCCCAACCCGAGAGGCCACCTGTCTGTGTAGA
TGTGTTGGATCGAGGGATCGATGGAGAAGTTACAATCCAGTTCCGTTTCC
GTGTCCCAAATTTATGTTGGATCGTCGACGCAGCCGTATGTGCTGTCCTG
AGGGGGTCGTCTCGATAATTGCCCCCCGATGGGCATCGGGCATCACGAAT
ATGCAGCAAGTGTTTTGAATGTTTTGTGCCGGGCAGATGTCTATTTTGTG
CGTGCGTGGAAAATCGTAGACTTCAGTCTTTGTCGAAACTTTGAGCACCC
GAAATCAGGGATATGAGTTTCTTGGTTTTCATGCCCGAACCTCGAGCGTT
GTGTCTGGTCTTCTGCCGCGCTTCCCGTCGCCTTCCCACAATTAATTGTT
GTTGGGCCTCTGGGGCTACGCATACTTGGTGCGTGGTTGGAGTGAGTCGA
GCACTCCTTCGTCTTCCGTGGCTTGTTTTGAGACGAACTCCGTCATAGCG
TGCACCCCGCCCTCCTGCTTTCCGTCCATGCCTGCCTCTATTTACTGCTG
TGGCAGATATATGATGACCCCAGCAAGCTGAAGCGCAGGACTTCCTTCGT
CTTGAGGGGACGT
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Coding sequence (CDS) from alignment at C-linearis_contig84:607496..616758-

>mRNA_C-linearis_contig84.16122.1 ID=mRNA_C-linearis_contig84.16122.1|Name=mRNA_C-linearis_contig84.16122.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at C-linearis_contig84:607496..616758- (Chordaria linearis ClinC8C monoicous)
ATGTCGTCTGCAAATGACCCGATGGAGGTCGAGATGTCGTCTGCAAATGA
CCCGATGGAGGTCGAGGTGAAGGACAGCAAGGGCAAGGGCAAGAGCAGGA
TGGCAGACCCGGGGGCACCAGGGCCGACAACGACCGCCGCCACCGTGGCC
CGCCTGGCGCACCGCGAGACGGCGAGGCAGACGCTGCCGTGGGTCGAGAA
GTACCGACCCTCGTCGCTCGACGAACTCGTCGCCCACGAGGACATCGTCA
GCATCCGTGAAGGACAGCAAGGGCAAGGGCAAGAGCAGGATGGCAGACCC
GGGGGCACCAGGGCCGACAACGACCGCCGCCACCGTGGCCCGCCTGGCGC
ACCGCGAGACGGCGAGGCAGACGCTGCCGTGGGTCGAGAAGTACCGACCC
TCGTCGCTCGACGAACTCGTCGCCCACGAGGACATCGTCAGCATCCTCCA
AAAGCTCATCGACAGCAACAAGCTGCCTCACCTGCTGTTCTACGGTCCCC
CCGGGACGGGAAAGACCTCCACGATCCTGGCCTGCGCAAAAAAGCTGTAC
GGCGCCGACTTCAAGATGATGGTTCTAGAGTCCAAAAGCTCATCGACAGC
AACAAGCTGCCTCACCTGCTGTTCTACGGTCCCCCCGGGACGGGAAAGAC
CTCCACGATCCTGGCCTGCGCAAAAAAGCTGTACGGCGCCGACTTCAAGA
TGATGGTTCTAGAGCTCAATGCGTCGGATGACCGAGGCATCGACGTTGTG
CGAGGCCAAATCAAGGAGTTCGCGGGGACGAAGCGGCTCTTCAGCTCCGG
CGTGAAGCTGGTCATCCTGGACGAGGCAGACGCCATGACCAATGACGCGC
AGTTTGCGCTCCGCCGAGCTCAATGCGTCGGATGACCGAGGCATCGACGT
TGTGCGAGGCCAAATCAAGGAGTTCGCGGGGACGAAGCGGCTCTTCAGCT
CCGGCGTGAAGCTGGTCATCCTGGACGAGGCAGACGCCATGACCAATGAC
GCGCAGTTTGCGCTCCGCCGAGTCATCGAGAAGTACACGAAACACACGCG
GTTCTGCATGATCTGCAACTACGTGAACAAGATCATCCCGGCGTTGCAGT
CGCGGTGCACCAAGTTTCGGTTCGCCCCGCTCAAGCCCGCGCAGATCCAG
GGTCGCCTGCAGCACGTGGTGGACCAGGAGAATCATCGAGAAGTACACGA
AACACACGCGGTTCTGCATGATCTGCAACTACGTGAACAAGATCATCCCG
GCGTTGCAGTCGCGGTGCACCAAGTTTCGGTTCGCCCCGCTCAAGCCCGC
GCAGATCCAGGGTCGCCTGCAGCACGTGGTGGACCAGGAGAAGGTGACGA
TCACCCCAGACGGCGTGGAGGCGGTGATGCGGTTGGGGCAGGGGGACATG
CGACGCGTCCTCAACCTCTTGCAGTCCACGCACATGGCGTACCAAAAGGC
AAGAGAGAAAAACGGAGGTGACGATCACCCCAGACGGCGTGGAGGCGGTG
ATGCGGTTGGGGCAGGGGGACATGCGACGCGTCCTCAACCTCTTGCAGTC
CACGCACATGGCGTACCAAAAGGCAAGAGAGAAAAACGGAGTGGACGAAC
GGCACGCCTACCTGTGTGCGGCCGCACCCCTGAAGGAGGACATGGAGTAC
ATCCGCAACGCCCTCCTGACGGCCTCTTTCAAGGTGGACGAACGGCACGC
CTACCTGTGTGCGGCCGCACCCCTGAAGGAGGACATGGAGTACATCCGCA
ACGCCCTCCTGACGGCCTCTTTCAAGGACGCGTTCGATGGTATCCTGAAG
CTGACCACCGCAAAGGGCTACTCTCTCGGGGACATCGTGCAGGACGCGTT
CGATGGTATCCTGAAGCTGACCACCGCAAAGGGCTACTCTCTCGGGGACA
TCGTGCAGGAGCTTGCGTTGAAGGTGATGGAGATAGAGCTACCTCCGGCG
GTGATGGTGCACCTTCTGGACGAGATGTCCAACACAGAGGAGCGGCTGGC
GCACGGGGGGTCGGAGCGGCTGCAGCTGGGATCTCTCGTCGGAGCCTTCG
CTACCGCCAGGAGCTTGCGTTGAAGGTGATGGAGATAGAGCTACCTCCGG
CGGTGATGGTGCACCTTCTGGACGAGATGTCCAACACAGAGGAGCGGCTG
GCGCACGGGGGGTCGGAGCGGCTGCAGCTGGGATCTCTCGTCGGAGCCTT
CGCTACCGCCAGATATATGATGACCCCAGCAAGCTGAATATATGATGACC
CCAGCAAGCTGA
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