mRNA_C-linearis_contig84.16096.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: D8LMX2_ECTSI (Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX2_ECTSI) HSP 1 Score: 1532 bits (3966), Expect = 0.000e+0 Identity = 1124/1712 (65.65%), Postives = 1230/1712 (71.85%), Query Frame = 1
Query: 1051 MPSLLIGTANA-QSAAPLDGSGSTPLGSARRQPRSARSDEQSSRSPPTTVDNSVRQQ---PEGS-MEGELPAIPSTMLGARSSPGDHNS-SSGKHGQQGDTPVFEKKGGVYVANVHASVLRGLCCWRERPAGRRGSGSRSRDSPKWQLVEGRYKGNLAGEELRKGDGGGSGIVDTTVGGMSSPSSFDELSKARFKMTARSVLLAMAAASFLRGDEALNTGNDGRTGSTDTGGFGGKVTSLSQRWRECDQQAQVSLASANPQAYYDEATVCGNCMEICRKLDSIRASGFPGADGVTTTREAADAAIT-SGGDAANASGPPPPRPSSEPLPESIPALARFLGKERRPGTAASGRGADAIAPLLRAESREEVGDAAVDVA--TEREGSDA---------NDGLEGGEGGGALSSGSADPSPHGRPKHILSGSGGNEEGAALEAGANV---SGGGPSVGDGPESDNINDLFAEQIGAPSVVAA-RTARSRDQKASSTRREKGNTGKAAIDRISDVYRDGGRAGRWKVAKPGNTKSK-------------ASDGELPNVATVARFAIERERLAREMGVDELGGPATLGVVNVGAASAAHGQQQGHRSLNDRGGGRGSKRARNHERXXXXXKAVDVGRGGGSHSLVDEDGAALAAPEPKVVAERKSAGEMLLEKLESVAEARSIDSAGGLRFSGDRTEEQQRAPKGYWHTEEESSFFNDPAGEREVGARGAGAGAAWGAAP--VAGELSTTESAFLERSRRLNGLDGG-------RGGGDSLFGQHFEAGFRDERSVIDGDGSXXXXXXXXXXSAAHVATIGALRDRLATLEGENAALXXXXXXXXXXXXXXXXXXXXXSKKLAQARTEFARAMTEKDEDCCRRELALQESHSRKLAKKSQESAEDXXXXXXXXXXXXXXXXXXXXX---AAEPGARERKSSKSLIARLDQALKDMAEQQRRFAQTKRTLRAEKTMEVAAAEAKGRRELQETRTLAAAMEDKVASLQEHVSEAAKQISTLKAREDEQRKRRQAAEEEGEKIRKDIGVLRQTVQASQSMDVTDESGGRRDVKSTLAAVTATSEARIRTLNNKVDFLKAQLASEQTLKAEVEAALALSRRSLFEAKDESRKQAAESEKVKEAAVXXXXXXXXXXXXXXXXXXYRIQSKVQTLQDQLNDALGDLSMSRRREEALKAEVAVSAAKLEDRGAELAXXXXXXXXXXXXXXXXXXXXADRAAREAVVRRLDNERQYLKSQLQSEITCKDELREALATATRQLGDIKVDWAEEQASRTDEFQKELKAKTEAMSDLNAEKAAMEAELVAVTRQFGLLKEGYSKARDNLRAEQSALETARTANRRLREEVTASTEELAAIKTQQGEDARRYSQSLVAAKSALDEADESKRKQGVEQQIRLREQLLKTGEVQRQLMKLQNELAGRERAAERLLVAERLGQGLARWCANRKASAFYHIVTGVALVAAEGDVRERTRRALREAGEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRMLEEAAVTAAVAATQVQTIEELRAQEAGTRRE-----SEVKENSKRYREASERAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLREGLDKAAGEAAVVAAAVSKEHDEVLEETQQAFRMERERLLEETERLVSAATEAERQHGLQLCTESKAAGEAKAATAFAVTREQDRAAADKK 6030
MP LL T Q AAPLDGSGSTPLGSARRQP SARS+ QS D SVR+Q EGS M GELPAIPSTMLG RS+ GDHNS S G+ G+ P+ EKK GVYVANVH+S LRGLCCWRERP RRGS S RDSP+WQLVE RYKGNLA EE R GDG +G G SSP+SFDELSKARFKMTARSVLLA A SFL G+E L+ G D R + G G SLSQRWRE DQQ Q+SLASANPQAYYDE TVCGNCMEICRKLDSIRASGFP G A A T S GDA++ SG P RP SEPLPE I A G ERRPGTAA+GR A A A + SR AVD T EG DA +DGLEG S RP N E + G ++ SGG + GP+S+ D+ AE +V A RTARS ++KAS R EK NT KA ++R+S VY +G AG AK G A GELPNVAT+ARFAIERERLAREMGVDELGGPA+LGVVNVG +AAHG +Q +LND GG GSKR +NH++ VD G G + + ++ L A + E K AGE LL++LESVAEARSI+SAGG+ G R EE + + EEESS F+DPA R+ G R A AAW P +A ELSTTESAFLERSRR LDGG RGG DSLFG HFEAGFR+E +DG GSXXXXXXXXXX HVATI ALRDRLA++EGENA XXXXXXXXXXXXXXXXXXXXX KKLAQARTEF+RAM+EKDED RRELAL+E HSR+LAKKSQ SAE+ A PGA ERKSSKSLIARLDQA +DMAEQQRRFAQTKR L AEKTMEVAAAEAKGRRELQE RTLAAAMEDK +SLQEHVSEAAK+IST KA E+EQRKRRQ+AEE+ EKIRK+I VLRQTVQASQS+DV DESGGRRD +STLAAVTATSEARIRTLNNKVDFLKAQLASEQTLKAEVEAALALSR+S+FEAKDESRKQAA S+K + XXXXXXXXXXXXXXXXXX LGDLSM+RRREEALKAEVAV A KLEDRG ELA ADRAAREAVVRRLDNERQYLKSQLQ+EITCKDELREALA ATRQLGDIKVDWA+EQASRTDEFQ+EL+AKT+AMSDLNAEK AMEAELVA+TRQ GLLKEGYSKARDNLRAEQSALETARTANRRLREEV A TEELAAIKTQQ EDARR+SQSLVAAK+ALDEADE+KR+Q VEQQ++LR QLLKTGEVQR+LM+LQNELA RERAAERLL AERLGQGL RWC NR+ASAFY IV+GV +VAAE DVRERTRRALREAGEG XXXXXXXXXXXXXXXX R+LEEA AAV+ATQVQTIEELRA E GTRRE +EVKENSKRYRE SERAAQ XXX XXXXXXXXXXXXXXXXXXXX VLRE L KA EAA VAAA S++HD +LEETQQAFRMERERL EE ERL SAATEAERQ GL LC E+KAAG A+A AFA+TREQD A A++K
Sbjct: 1 MPPLLGNTPVVPQIAAPLDGSGSTPLGSARRQPTSARSNGQS-----IAEDVSVRKQLANNEGSSMTGELPAIPSTMLGPRSASGDHNSRSKGEEGEGERAPIIEKKRGVYVANVHSSALRGLCCWRERPVDRRGSASHGRDSPRWQLVEARYKGNLASEEHR-GDGSDAGNAKAVFEGSSSPASFDELSKARFKMTARSVLLARAVESFLWGEEPLHIGADDRKPGSGVKGGSGTNCSLSQRWREYDQQVQLSLASANPQAYYDEVTVCGNCMEICRKLDSIRASGFPDPAGAALAGGATTAGATWSSGDASSLSGEPALRPRSEPLPECI---AATTGNERRPGTAATGREAGA-ATMTADNSRPGPPGEAVDPDGNTNHEGRDAVVMERDTRRDDGLEG--------------SQTVRPNE-------NAESSGTSLGESMPKRSGGEVPMSAGPKSEKDIDITAEGNEEAGLVRAPRTARSGNEKASPVRLEKRNTAKATMERMSSVYGEGTIAGGRNHAKSGXXXXXXXXXXXXTGGGGGAVGGELPNVATIARFAIERERLAREMGVDELGGPASLGVVNVGVTAAAHGHRQKKGNLNDEVGGIGSKRVKNHQQRRGRGGDVDGSNGVGDYRIGEKTVNPLPAASGALAGE-KIAGETLLDRLESVAEARSIESAGGVHGGGSRAEEYIKHDDWRHNDEEESSLFSDPA--RKNGQRAARGEAAWDPVPPPLAAELSTTESAFLERSRRHVRLDGGGAAATGLRGGDDSLFGNHFEAGFRNESGGVDGSGSXXXXXXXXXXXG-HVATIAALRDRLASVEGENAXXXXXXXXXXXXXXXXXXXXXXXXKKLAQARTEFSRAMSEKDEDGRRRELALEERHSRELAKKSQTSAEEMMVAVSGSGEESEGLGAGQGGDRKAVAPGAMERKSSKSLIARLDQAFRDMAEQQRRFAQTKRNLLAEKTMEVAAAEAKGRRELQEARTLAAAMEDKASSLQEHVSEAAKKISTFKAMEEEQRKRRQSAEEDTEKIRKEISVLRQTVQASQSVDVADESGGRRDAQSTLAAVTATSEARIRTLNNKVDFLKAQLASEQTLKAEVEAALALSRKSVFEAKDESRKQAAASDKARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGDLSMARRREEALKAEVAVMATKLEDRGTELAKAQSRADDLAEARAADTESSADRAAREAVVRRLDNERQYLKSQLQTEITCKDELREALAKATRQLGDIKVDWADEQASRTDEFQQELQAKTKAMSDLNAEKVAMEAELVAITRQVGLLKEGYSKARDNLRAEQSALETARTANRRLREEVKACTEELAAIKTQQEEDARRHSQSLVAAKTALDEADEAKRRQAVEQQMQLRGQLLKTGEVQRRLMELQNELAVRERAAERLLAAERLGQGLTRWCTNRRASAFYRIVSGVTMVAAESDVRERTRRALREAGEGXXXXXXXXXXXXXXXXXVKAEDELAEAERVFAEERDRLLEEAEAAAAVSATQVQTIEELRALETGTRRELEKARAEVKENSKRYRETSERAAQEAKLRXXXRVXXXXXXXXXXXXXXXXXXXXKSDEKWRGVLREELKKAEDEAAAVAAAASRDHDALLEETQQAFRMERERLREEAERLASAATEAERQRGLTLCAEAKAAGAAEAGAAFALTREQDLAEAERK 1677
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A835YVZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ6_9STRA) HSP 1 Score: 148 bits (374), Expect = 8.080e-32 Identity = 183/523 (34.99%), Postives = 257/523 (49.14%), Query Frame = 3
Query: 6213 WRRASEEAEARAAAEKAAAYEQGTADRGRQAEAEALQLQDAAEKALEEVKQGARTTIEEMAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFSQXXXRAVANXXXXXXXXARVRAERDRASAVEAAKERXXLATEKVQEELRRAKTEWTAEKRRLKEQTTLLEEAEQKAKDDLLRAMANSSQATQRARARWEEGQKSAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQAEAMADRIRKQASVSLQKAEGLYADSRQENARLAAELDKCRRELEECQSSLLHSEADLKEQSVSHSIDTWRMAVAALTLRLGNEKTTRQLREEAAEQEAEAESTFEAQKEALSTVVEELLDLA-FDSRRRFAAMQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLL 7778
W RA +E EAR+AA++ A+ +G A+R QA+ E +L+ A E+AL EVK GAR I++++A XXXXX E+ X AR +RD+ +AV+AA +R L E+ EEL+ +T+W E R L + + +++ A QRARA+WE+ Q +A+ XXXXXXXXXXXXXXXXXXXXXXXXX A + +S++ S+ W+ A E+ R R AQ A L+ A SR + AAM++ LVN+KREVL+DHK+QS +L ++L+ L+RDR+ E ++ L + E E A+DAE+E HSRQSA+G DG + A R++RRLDEELE L A+E +R + A D +L+ L E+R K+ EM+ LER LV VLV+QQK+LLS+L
Sbjct: 646 WERAVQELEARSAADQKVAHVRGFAERDAQAKTEIERLRLAVERALTEVKSGARVAIQDLSARHERDLQETEARAAAQAAXXXXXAVAASRVEWESECXXXXXRAVTAAQAEARTLGDRDKRAAVDAAHQREALRAERATEELQTLRTKWATESRDLIRAADEASQEVVRLREETAAAXXXXXXXAQRARAKWEDAQAAALAECAEEGTRSTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDARAXXXXSQXXXXXXXXXXXXXXXXAAARSLAGSLRAWQAAXXXXRRDAARERAER-ARXXXXXXXXXXXXXXXAQALAALRADGALVAAAEAHSREQRAAMRDALVNYKREVLVDHKLQSEALRRQLEQLSRDREVAENRKSELLKTAAEAERVARDAERELQQHSRQSALGADGRVSAAHQRRRRRLDEELEEALRALEGRRAEVAAADARLAQLGEARIAKEGEMQALERELVGVLVDQQKRLLSIL 1167
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A7S3ZZB9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZB9_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.690e-24 Identity = 96/278 (34.53%), Postives = 151/278 (54.32%), Query Frame = 3
Query: 7008 DSRQENARLAAELDKCRRELEECQSSLLHSEADLKEQSVSHSIDTWRMAVAALTLRLGNEKTTRQLREEAAEQEAEAESTFEAQ---KEALSTVVEELLDLAFDSRRRFAA-MQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEASAQAEKLQDIDERT 7829
D++ +A A+L + R+ ++ + ++ ++ Q H++ WR A A+ EK Q A+ E E Q E + V L+ + F M +TLVNH+R L+ HK +ST L EL+ + RDRD+LE +R + E++ + E+ HAHS+ SAI DG + A A+KK+R+D++ E LL +E +R AL D +L L ++R K+++MK LER LV++LV QQKKLL++L EA A +++DERT
Sbjct: 1646 DAQALSAAYEAQLAQASRQWDDERDRVVDLRGEVAFQRRQHALREWRTAAKAVV----QEKKAEQRERNASRAAKEVERMLTLQLRRTERKAAFVRTQLEAQIEEGEAFRGRMHDTLVNHERATLVAHKRRSTELGMELEVIVRDRDELEAERDKILEYVDEMQESVRAIEQAIHAHSKNSAISSDGRVNVAHAKKKKRMDDDHEMLLLGVEKQRNALSETDARLQRLNDARERKEDDMKELERRLVELLVSQQKKLLAILQEA---AHTTRELDERT 1916
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A835Z097_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z097_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.650e-23 Identity = 89/255 (34.90%), Postives = 127/255 (49.80%), Query Frame = 1
Query: 184 GKNKWAGMRLVDTVLLDSAGNVESWVFTAKTGHVTSKKRAQDRTKIAERFERFALANPRNTERFVALLDSACPPARANVKERVVLDDKALREALLGGSSQQVPFELKGASLQCYLRPQNGSNSFLRAYYQ-HRGIDPPLYSLSKVSPLYRL------PGSEGSLKVGDDVEMPSSEEPIPDDVLESTRIRTETERALTSLVAFLELRLSSEGNDEDQNQTILECKAEFVIDDNGELWLTSLPSVTVASGPDRGVV 927
G+ KW G+R+VDTV + G VE WVFTAK+G T+KKRA+ KI +RF RFALANP N E+ VA+ RA L L AL G+ + + A +QC+LRP+ G NSF+R +Q G ++ VSPLY P E L + + E ++R++ AL L AFL L +E ++E A+F++DDNG++WL+++ T A + V
Sbjct: 40 GRPKWRGIRIVDTVFIGPDGAVERWVFTAKSGEATAKKRAEGSDKIVDRFTRFALANPHNKEQLVAVATYRDGTRRA-------LSRSELTAALSAGNERD---DGAIAWVQCFLRPRAGHNSFIRCSWQAQHGQVKSVW----VSPLYATAPDACAPERETQLLAAAHLHAAALE-----------KVRSDVTAALQQLAAFLHTALGAE---------VVEASADFIVDDNGQVWLSAVQRATAAPAAPQNAV 260
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A7S2SNH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNH8_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.160e-19 Identity = 69/152 (45.39%), Postives = 92/152 (60.53%), Query Frame = 3
Query: 7332 MQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEA 7787
M +TLVNHKRE+L H+ QS SL K+L+++ +RD LE ++ L E E+E K E + HS+QSAI +G I A ARKK+RLDEE E LLEA+E+KR++L A LV+VLV+QQKKLL +LS+A
Sbjct: 126 MNDTLVNHKREILKQHQSQSASLQKQLEAIGVERDGLETRKDRLLDELSEMEISIKSLETQIREHSQQSAIS-EGRINVAHARKKKRLDEEYEVLLEAVESKRRSLTAXXXXXXXXXXXXXXXXXXXXXXXXXLVEVLVDQQKKLLKILSDA 276
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A7S2G7M7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7M7_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.540e-17 Identity = 66/165 (40.00%), Postives = 97/165 (58.79%), Query Frame = 3
Query: 7305 FDSRRRFAAMQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEASAQA 7799
F+ +R + M TLV HKRE LI++K +S SL +LD++ + D L ++ HS+QSAI +G + A ARKK+RLDEE E LL+ M KR + +D K++ AE R K++ +K LER +V+VLV+QQKKLL++L++A A
Sbjct: 14 FEGKR--SQMHATLVEHKREELIENKTKSQSLTAQLDAINLECDGLIRRKNXXXXXXXXXXXXXXXXXXXXRVHSQQSAIS-EGRVNVAHARKKKRLDEEYENLLQIMHKKRDDISVLDKKIAACAERRQDKEDALKDLERQIVEVLVDQQKKLLAILTDAGRSA 175
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A7S1BNZ5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNZ5_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.830e-15 Identity = 61/161 (37.89%), Postives = 101/161 (62.73%), Query Frame = 3
Query: 7302 AFDSRRRFAAMQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSE 7784
A + RR+ A M + L NHKR+ L+ + ++ + ELD+++ +R+++ + L+R+ +E K+ E++ HS++S I G + A A+KK+RLD+E E L+E +E KR + V+ L+ L ++ +E+MK LER+ V VL+EQQK LLS LSE
Sbjct: 685 AEEFRRQKAEMYKVLTNHKRDDLVRQRAETVRVATELDTISSERERVNYKFDFLKRQMGSMEDSLKELEEQMQTHSKKSTI-QGGRLNLAHAKKKKRLDDEFEQLIECIELKRSEMNQVEIHLNKLDSKKSDAEEKMKVLERSFVDVLMEQQKCLLSTLSE 844
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A7S3PMA7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMA7_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.670e-14 Identity = 53/149 (35.57%), Postives = 91/149 (61.07%), Query Frame = 3
Query: 7332 MQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLL 7778
M++ LVN+KR+ L+ HK +ST + +L L+ + + E++R +++ Q ++ E++ + SAI +G + A A++KR LD+ELE +LE E KR L ++ K+S + + + E+K LE LV++L+EQQKKLL +L
Sbjct: 39 MRDILVNYKRDTLLQHKARSTVIQTDLAKLSEIKQKSEKERNAYLSAILQIDGQIRELERQLRELGKVSAI-QNGRVNVAHAKRKRVLDQELEHVLEKAEMKRDGLAKIEEKISQIGDEANENENELKRLESQLVEILIEQQKKLLGIL 186
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A7S3M7I6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7I6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 2.870e-14 Identity = 71/251 (28.29%), Postives = 131/251 (52.19%), Query Frame = 3
Query: 7065 LEECQSSLLHSEADLKEQSVSHSIDTWRMAVAALTLRLGNEKTTRQLREEAAEQEAEAESTFEAQKEALSTVVEELLDLAFDSRRRFAAMQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLSEASAQAEKLQDI 7817
LEE + SL + + K + S+ W+ +R ++ Q +EAA++ A+ + +A+ + + ++ L L D+ L H+ LI + + + ++L+ L ++D LEEQ+ + + ++E Q ++ E +H+++S++ +G I A ARKKRRLD ELE LLE++E KR + +D +++ R + EM +ER LV++L+EQQK ++ L + +K Q I
Sbjct: 400 LEETEDSLYDLQQECKRVKMDSSLAVWKSVTKIFQMRQRFQEGIAQFDKEAAQRYADIKQEMQAKLDHSTWMILRLASLLQDNDVARINTLAILTGHRTAELISSRNKIQVMEQDLERLTMEKDSLEEQKEMFDGDITQMERQVRELEDMIRSHNQESSMS-NGRINVAHARKKRRLDTELEQLLESIEQKRHTMSTIDQRITQKGHERDDLELEMIDVERKLVEILLEQQKLIMGRLDDGKLILDKTQMI 649
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Match: A0A2R5GHI1_9STRA (Copine-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHI1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.130e-14 Identity = 63/157 (40.13%), Postives = 97/157 (61.78%), Query Frame = 3
Query: 7311 SRRRFAAMQETLVNHKREVLIDHKVQSTSLHKELDSLARDRDQLEEQRLLLQREFRELESQAKDAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLSGLAESRAVKDEEMKGLERTLVQVLVEQQKKLLSLLS 7781
SRRR M + LVNHKRE L+ HKV++ + +L L R+ LE+QR LQR+ LE Q + S+ SA+ DG I A++KRRLD+E E LL+ + +RK + AV+ +++ + + +K+E+++ +E LV +LVEQQK LL+ L+
Sbjct: 1530 SRRR---MHDILVNHKREDLLQHKVETGVIQDDLKKLQHSREALEKQREQLQRDVGYLEGQIRGVXXXXEQLSKVSAV-QDGQINVTHAKRKRRLDQEFEHLLDRVAHQRKQIDAVNERIAAVQKDAELKEEDLREMEAGLVAILVEQQKLLLAELA 1682 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig84.16096.1 >prot_C-linearis_contig84.16096.1 ID=prot_C-linearis_contig84.16096.1|Name=mRNA_C-linearis_contig84.16096.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2065bp MAPREDVTVLEGSNSRSEDDDCASSAGPLPARWIAAALSGQGPPSSTKTSback to top mRNA from alignment at C-linearis_contig84:282885..302144- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig84.16096.1 ID=mRNA_C-linearis_contig84.16096.1|Name=mRNA_C-linearis_contig84.16096.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=19260bp|location=Sequence derived from alignment at C-linearis_contig84:282885..302144- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig84:282885..302144- >mRNA_C-linearis_contig84.16096.1 ID=mRNA_C-linearis_contig84.16096.1|Name=mRNA_C-linearis_contig84.16096.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=12390bp|location=Sequence derived from alignment at C-linearis_contig84:282885..302144- (Chordaria linearis ClinC8C monoicous)back to top |