mRNA_C-linearis_contig83.16077.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE) HSP 1 Score: 542 bits (1397), Expect = 3.070e-174 Identity = 330/809 (40.79%), Postives = 422/809 (52.16%), Query Frame = 1
Query: 4 RNLAVVVPTHSGDLEGAIAALELWPKVCSAPTLHHMHLVVYYSGSAGDGVWNEDIISTVARTGGRCFERTKAVFANLTKQENVYPKGPSVMFYKMFLDRDVARALEGYDALAVVEWDVVVAHPTSFEMLYKSAFFSSEEFWMKGSTLAGAEFHETAGLSEMWHILGHLNGNAIYNNTDPGFHEFVNFTLNRWQYQYSYDVALWATIADFPYSWPLWQRYSSKFVATQLIANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGTTNHAVAHAKARVAAV---------APDCARACGGAGKLEISG-----MSTFCDASCLLRWSPAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDNM------------------------GPNTGVHVVMCSTGSPPAA---------------------------------------------KSECSDECVSTGDAVCDYRCGRGVYGDLHCNWRGLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPLAIGSNPTLELGSVGKTEPPTAL--------------------------PSGAATEASAVDVASTALTDSAAFSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINA-SRVEHSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRARTRTNKGGPGNDLADDLTGDLAALAASHNEYASVHVPEV 2100
R LAVVVP H+GDL A+ +L WP C + TL + HL++YY+G D V ++ +A+TGGRCF T+ V ANL+++ENVYPKGPSV FYK++LD +V R L YDALA++EWDV+VAH TSFE LY +AF E FW+KGSTL G FHET L E H+LGH+NGNAIYNNTDP F EFVN+TL RW+Y SYDVALWATI+DFPYSWPLWQR+S KFVA LIANVGF D+ Q V AV+ NTLFIHGS GGGG+ HA + AKA + C +CGG G SG ++T CD SC G RFGG+ CGA D +G CR C+T E A A E +L+ + GP V G A + CS++C D VCD CG G YGD +C WRG G +CRFCF D +A A+ ++K G VIMC T EPP P A E + +I RG++CAFM G+ +FL+ET V V S++ FMPGM+V IAT D VF R+LG P V + A S + + + AD+ CG T+L++YM GE+LSR FT KDTHS+ GDL+V + + R+A A +LGF P F++G D++LP N QLR ++ + + G G L D + + AL +++ V VPEV
Sbjct: 122 RRLAVVVPAHAGDLGKALTSLATWPTTCHSSTLVNAHLILYYAGGEDDDV--AAVLPALAQTGGRCFANTRLVLANLSQEENVYPKGPSVQFYKLYLDSNVRRQLIEYDALAIIEWDVIVAHDTSFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHA-SGAKADSSPALRFLGKNRPGERCTASCGG-GAPPSSGVGAGALATVCDRSCYSG-GELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAMRGRSFKMPVDNEKSRRVLRADDGPEGAAGWVEGGEGGDSRAVLRGNRGGGAGVTRRMDAVDGGTDDEMVEXXXXXXXXXXXXXXXPATGCSNKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTPYDPANEP---------------YLKDITRGQICAFMTGFSSFLKETEVTVKSIVQFMPGMRVAIATQDHDVSVFKRSLGNLPGVVISEAISPITLAPLLADRHCGKGTKLVFYMNPGELLSRKFTSKDTHSAAGDLLVVYAEVGRVGEASARRALATMSVLGFSSPSFSFGMDIMLPVHTNGQLRELLLS----DPGATGKGL-DRESQAVHALG----KFSGVFVPEV 901
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 503 bits (1294), Expect = 8.430e-162 Identity = 285/657 (43.38%), Postives = 380/657 (57.84%), Query Frame = 1
Query: 241 QENVYPKGPSVMFYKMFLDRDVARALEGYDALAVVEWDVVVAHPTSFEMLYKSAFFSSEEFWMKGSTLAGAEFHETAGLSEMWHILGHLNGNAIYNNTDPGFHEFVNFTLNRWQYQYSYDVALWATIADFPYSWPLWQRYSSKFVATQLIANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGT--TNHAVAHAKARVAAVA--------------------------------PDCARACGGAGKLEISG------------MSTFCD-ASCLLRWS-PAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDNMGPNTGVH-VVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGRGVYGDLHCNWRGLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPLAIGSNPTLELGSVGKTEPPTALPSGAATEASAV-DVASTALTDSAA-----------------------FSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINASRVE-HSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRART 1989
QENVYPKGPSV FYK+FL+ + LE + A+AV+EWDV+VAH SFE LY +AF E FW+KGS LAG FH T +++ WH+LGH+NGNAIYNN+DP F +FV FTL RW Y YSYDVALWAT++DFPYSWPLWQR+SSKFV+T LIANVGF DV Q VG A++ T+FIHGS GGGGT + A A AA + P+C CG ++ G M+T CD A+C + A + G CGA D RFG+ CR CY E AL +R L + H V+MC T PP A S CS +C + D +CD RC G++G+ +CNWR G++CRFCF D A +AD+ +K G RVIMC+THEPP+ + EL ++ K + + A+ A+A T+ T A +S ++ RGEMCAF Y+ +L ET V S+ HF+PGM+V +A F VFNRTLG +P V V+NA+ H+++ AD CG T+LI Y+ G+V+SRPF+ KDTH +RG+L+V +T E + ++ +A LLGF P F++G+DL LPA +N++LR ++ + T
Sbjct: 28 QENVYPKGPSVQFYKLFLEDTIKEKLERFGAIAVIEWDVLVAHDKSFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSTRLATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREASEEQPHHVIMCDTLRPPEA-STCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVELTQ---AELDALEKERIEHVMEAAASKMANAAKQEKKTSNTKGHANPGGKTAGDEGEPDAPVHPAMIEYSKDLLRGEMCAFATAYYLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNRTLGGYPDVEVVNATTTGGHASLLADVHCGEGTKLILYLGPGDVVSRPFSKKDTHGTRGELLVPYTEPERLDEYHIKRTQATTSLLGFDAPSFSFGTDLFLPAWVNRELRRVLASGT 680
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE) HSP 1 Score: 488 bits (1256), Expect = 1.030e-153 Identity = 310/817 (37.94%), Postives = 413/817 (50.55%), Query Frame = 1
Query: 4 RNLAVVVPTHSGDLEGAIAALELWPKVCSAPTLHHMHLVVYYSGSAGDGVWNEDIISTVARTGGRCFERTKAVFANLTKQENVYPKGPSVMFYKMFLDRDVARALEGYDALAVVEWDVVVAHPTSFEMLYKSAFFSSEEFWMKGSTLAGAEFHETAGLSEMWHILGHLNGNAIYNNTDPGFHEFVNFTLNRWQYQYSYDVALWATIADFPYSWPLWQRYSSKFVATQLIANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGT---TNHAVAHAKARVAAVAPDCARACG-----GAGKLEISGMSTFCDASCLLRWSPAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDNM-------------------------------------------------GPNT---------------GV----------------------HVVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGRGVYGDLHCNWRGLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPL----------AIGSNPTLELGSVGKTE-----PPTALPSGAATEASAVDVASTALTDSAAFSG--------NIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINASR-VEHSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRARTRTNKGGPGNDLADDLTGDLAALAASHNEYASVHVPEV 2100
R LAVVVP + D+ A A+L WP C + TL + LV YY+G GD +++T+ +TGGRCF RT+ V A+ + ++N PK S+ FYK++LD + YDALAV+EW+V+VAH SFE LY +AF E FW+KGS L HE SE +GH+NGNAIYNNTD F ++VNFT+ RW+Y YD ALWATI+DFPYSWPLWQR+S KFV T LIANVG HDV E+ AV+ TLFIHG+ GG + +N +A C +CG + SG +T CD SC G RFGGH CGA D +G CR C+T A A E L+ + + G N GV HV+MC T PP A S CS +C DAVCD CG G +GD +CNWRG G+NCR+C+ D A A+ +++ G V+MC+T EPP A ++L + P T++P A + + S LTD A S I RG++CAF+ FL+ET V V S+ FMPGM+V IAT D +F R G P V V A R + + AD+ CG T+LI YM+ GE+L R FT +DTHS GDL+V+++ + Q +A AA ++LGF P F++G+D+ILP ++N++LR + + + KG GDL A+ A N ++VPEV
Sbjct: 92 RRLAVVVPIQAADVRKAQASLAAWPTRCHSSTLVNTDLVAYYAG--GDDEHVSAMLATIEQTGGRCFARTRLVLAHASDKDNERPKMASIQFYKLYLDSTIRCQFADYDALAVMEWNVIVAHDRSFEELYTAAFGGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWEYTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVGVHDVDIRELLDAVAGGTLFIHGTPTDGGVSMVGSNE-----------LAERCTVSCGFRFPNAHATMAPSGTATVCDRSCYAGGRD-GARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAEDTLALQERLVLEREGDTRTGNVAFEKSWRSDEAAWTYGRGGEGWPQQEVGEQHVEGGVGGNRDNRERGAVGHQRQQGGVNIMEPKQDRDMNKVQPILEKQRHVIMCDTLMPPPAASGCSHQCHEMDDAVCDRSCGTGRHGDYNCNWRGYGKNCRYCYNDRLQAMAANVVARQRGGSVVMCNTFEPPTEDEDWESPVEAEKVRAMVKLDEEADADAQEKAPQTSMP---APLPHSFNTGSATLTDEATSSNPANEPFVTGIKRGQICAFLTSNTFFLKETQVSVKSIGQFMPGMRVAIATDANDVSLFKRVFGTVPEVRVSVAIRSTSRAPLLADRHCGEGTKLILYMKAGELLWRTFTSRDTHSPAGDLLVAYSELDRVGQSRKNKALAAMLVLGFKGPSFSFGTDIILPVDVNRELRNFLLSDSTAVKG------RVSTNGDLQAVHALGN-VPGLYVPEV 884
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE) HSP 1 Score: 471 bits (1212), Expect = 9.660e-150 Identity = 284/693 (40.98%), Postives = 375/693 (54.11%), Query Frame = 1
Query: 241 QENVYPKGPSVMFYKMFLDRDVARALEGYDALAVVEWDVVVAHPTSFEMLYKSAFFSSEEFWMKGSTLAGAEFHETAGLSEMWHILGHLNGNAIYNNTDPGFHEFVNFTLNRWQYQYSYDVALWATIADFPYSWPLWQRYSSKFVATQLIANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGT--TNHAVAHAKARVAAVA--------------------------------PDCARACG----------GAGKLEISGMSTFCD-ASCLLRWS-PAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDN-MGPNTGVHVVMCSTGSPPAAKSECSDECVSTGDA------------------------VCDYRCGRGVYGDLHCNWRGLG--------------QNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPLAIGSNPTLELGSVGKTEPPTALPSGAATEASAVDVAS-TALTDSAA-----------------------FSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINASRVE-HSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRART 1989
QENVYPKGPSV FYK+FL+ LE + A+A++EWDV VAH SFE LY +AF E FW+KGS LAG FH TA +++ W +LGH+NGNAIYNN+DP F +FV FTL RW Y YSYDVALWAT++DFPYSWPLWQR+SSKFV+T LIANVGF DV Q +G A++ T+FIHGS GGGGT + A A AA + P+C CG G G+ + ++T CD A+C + A + G CGA D RFG+ CR CY E AL +R L + +G HV+MC T PP A S CS +C D +CD RC G++G+ +CNWR G ++CRFCF D A +ADE +K G RVIMC+THEPP+ E+ ++ K + + A+ A+A T+ T A +S N+ RGEMCAF Y +L ET V S+ HF+PGM+V +A F VFNRTLG +P V ++NA+ H+++ AD CG T+LI Y+ G+V+SRPF+ KDTH + G L+V +T + + R+ +A LLGF P F+YG+DL LPA +N +LR ++ + T
Sbjct: 28 QENVYPKGPSVQFYKLFLEDTFKEKLERFGAIAIMEWDVRVAHDKSFEKLYIAAFDVVEPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETLGNALASETMFIHGSLSGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSIRLATPECRTECGSTVSWDLLGGGGGEDGVMDIATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRILQNQAREVGEVQPRHVIMCDTLRPPEA-STCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNTHEPPV---ERTQAEMDALEKKRIEHVMEATASKMANAAKQGKKTSNTKGHANPGGKAAGDEGEPDAPVHPAMIEYSENLLRGEMCAFSTAYHLYLRETEASVRSLAHFLPGMRVRLAVDTIHFSVFNRTLGGYPDVEIVNATTTGGHASLLADVHCGEGTKLILYLGPGDVVSRPFSKKDTHGTCGQLLVPYTEPDRLDEYHVRRTQATTFLLGFDAPSFSYGADLFLPAWVNPELRRVLASGT 716
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: D7FKL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL9_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 1.120e-121 Identity = 227/494 (45.95%), Postives = 291/494 (58.91%), Query Frame = 1
Query: 688 IANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGTTNHAVAHAKARVAAVAPD-----CARACGGA--GKLEISGMSTFCDASCLLRWSPAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDNMGPNTGVHVVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGRGVYGDLHCNWRGLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPLAIGS--NPTLELGSVGKTEP---PTALPSGAATEASAVDVAS-------TALTDSAAFSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINASRVEHSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRAR----TRTNKGGPGNDLADDLTGDLAALAASHNEYASVHVPEV 2100
I NVG DVS V AV++ TLFIHGS+ G H++ H + A++ D C ACG A GK+ +G+STFCD SC WSPAGPR GGH CGA DP++FG CR CYT +E AL + KL+S +HVVMC T PP A S C+ C D VCDYRCG G YGD +C+WRGLG CR CF + AHLADE +K +G RV+MC+THEPP IGS N E G + PT L + A E + ++ S A T+ + G RG +CAFM GY L V VSSVL FMPGM++GI THP +F+ FNRT G P V+V ++ VEH + AD CG TRLIYYM+ GE+LSR FT KDTH+ GDLIVS +++ Q + + +LLG P FT+GSDLILPAE N QLR ++ RT+ +D + + LA +A++H + A +++PEV
Sbjct: 123 ITNVGHFDVSDQHVAQAVAQETLFIHGSSQSEGSLA-HSINHFGRPMGALSIDGNSLDCTSACGSALSGKIG-TGVSTFCDESCATGWSPAGPRLGGHDCGAGDPSQFGGTCRLCYTDEELALVADHKLASASANPSKPDMHVVMCDTTQPPPASS-CTTACQDASDTVCDYRCGSGRYGDFNCDWRGLGSTCRLCFNELPAAHLADEFAKAHGGRVVMCNTHEPPPPIGSYTNDKEEENGHGSADAGNGPT-LVAPAPQERNNKEIVSGDEESQGPAATE---YIGTTTRGHICAFMRGYSRLLPMMKVSVSSVLQFMPGMRIGITTHPREFEEFNRTFGHLPNVTVGTSTNVEHGPLVADYICGEGTRLIYYMDAGEMLSRTFTKKDTHTVTGDLIVSLVNTDEVPQPTAARGMGSSVLLGVTTPTFTHGSDLILPAETNAQLRAVLEGNQKLVARTDAKHGHSDRVERIYEYLADVASTHKDSAIINIPEV 609
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: A0A6H5L0V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V3_9PHAE) HSP 1 Score: 395 bits (1014), Expect = 1.230e-121 Identity = 236/512 (46.09%), Postives = 300/512 (58.59%), Query Frame = 1
Query: 688 IANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGTTNHAVAHAKARVAAVAPDCARACGGAGKLEIS-GMSTFCDASCLLRWSPAGPRFGGHGCGADDPTRFGEDCRRCYT-SQEAALAEER-KLSSPDNMGPNTGVHVVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGRGVYGDLHCNWRGLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPLAIGSNPTLEL-----GSVGKTEPPTALPSGAATEASAVDVASTALTDSAAFSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRT----------------------------LGKFPTVSVINASRVEHSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRARTRTNK----GGPGNDL-ADDLTGDLAALAASHNEYASVHVPEV 2100
I+N+GF D++ V AVS++TLFIHG+T GG + V HA R + +C ACG S G+ST CD SC ++WS GPRFGGH CGA + +++G +CR CYT S+EA+ AE LSS D + + HVVMC T +PP+ S CS C +T D VCDYRCG G+YGDLHCNWRGLG+ CR CF D A+LADE K G RVI+C+T EPP +IGS G + + P P G T + D T L+ S G+MCAFM GYF FL ET + V SVL FMP M+V I THP DF VFNR+ G VS+ N+S VE+ ++ AD+ CG TRLIYYMEVG+VLSR FT K TH++R +LIVSF + H E R+A + +LLGF P FT+GSDLILPAE N QLR ++ +TR + G G +L +DL LA++A H E S++VPEV
Sbjct: 9 ISNIGFFDINDKHVEKAVSQDTLFIHGNTLSGGSVASLPVKHAH-RPRHSSSNCTDACGSRTSAGNSAGISTICDESCSVKWSSTGPRFGGHNCGAGNASQYGSNCRLCYTNSEEASTAESMLALSSVDTLA--SDAHVVMCGTRNPPSGPS-CSAGCENTIDTVCDYRCGSGLYGDLHCNWRGLGKTCRLCFHDDSAAYLADEAVKAQGGRVILCNTLEPPRSIGSEAEARRNNSGGGRLASSIPENDDPIGWQTNGTISDPVPTVLSSSMG-------GQMCAFMRGYFEFLSETIISVRSVLDFMPAMRVAIVTHPRDFHVFNRSESFALSMRLTLAPSRIGPPNEFPKQSVEFGHLQHVSIGNSSSVEYGSLMADQLCGNGTRLIYYMEVGQVLSRTFTLKGTHTARQELIVSFADARDVHPENVRRAMGSTVLLGFPAPTFTHGSDLILPAETNGQLRALLGTKTRQGRRLEAGLHGAELDVEDLYAYLASVADLHRESTSIYVPEV 509
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: D7FRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS3_ECTSI) HSP 1 Score: 381 bits (978), Expect = 1.520e-116 Identity = 219/483 (45.34%), Postives = 279/483 (57.76%), Query Frame = 1
Query: 688 IANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGTTNHAVAHAKARVAAVAPDCARACGGAGKLEI-SGMSTFCDASCLLRWSPAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDNMGPNTGVHVVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGRGVYGDLHCNWRGLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPLAIGSNPTLELGSVGKTEPPTA--LPSGAATEASAVDVASTA--LTDSAA--FSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINASRVEHSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRARTR----TN-KGGPGNDLADDLTGDLAALAASHNEYASVHVPEV 2100
I+NVGF DVS V A+S+ TLFIHGS+ GG + A A C ACG ++ +G STFCD SC WSPAGPR GGH CGA DP+++G CR CYT+++ ALA +R L+S HVVMC T PP A S C+ C D VCDYRCG G YGD +CNWRG+ CR CF + A LADE++K +G RV+MC+THEPPL IGS + G T LPS +++ S + + A D AA + G RG +CAFM G+ L ET V VSSVL MPGM+V IAT F F R P V++ + V H A+ AD+ CG TRLIYY+E G+V+SR FT KDTH+ G+LIVS +++ R+A + +LLG P FT+GSDLILPAE N QLR ++ A R TN + G + + LA +A H AS++VPEV
Sbjct: 42 ISNVGFFDVSDKHVAQAISQETLFIHGSSHSGGSAAISSPPKASASDINTL-SCTGACGSEHSAQVRTGASTFCDESCSTGWSPAGPRLGGHNCGAGDPSQYGSTCRLCYTNEDEALAADRTLASLSTDPSTPDAHVVMCDTTQPPQA-SRCTTACQDMADTVCDYRCGSGRYGDFNCNWRGVDSTCRLCFHETSVALLADEVAKAHGGRVVMCNTHEPPLPIGSKTKATVEDTGHRSADTGDGLPSAVSSQESKRKLLAVADESNDPAATAYIGTTTRGHICAFMRGFVELLPETKVSVSSVLELMPGMRVAIATDAAGFQEFARAFAHLPDVAIELSKSVSHGALIADEVCGKGTRLIYYIEAGQVVSRTFTEKDTHTVLGNLIVSLANADEVPPVYARRALGSTVLLGVTTPTFTHGSDLILPAETNAQLRAVLGANQRLVAQTNAEDGDTGRQTERVYEYLADVAKMHRGSASIYVPEV 522
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: A0A6H5KI77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI77_9PHAE) HSP 1 Score: 370 bits (949), Expect = 1.230e-109 Identity = 214/481 (44.49%), Postives = 267/481 (55.51%), Query Frame = 1
Query: 688 IANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGTTNHAVAHAKARVAAVAPDCARACGGAGKLEISGMSTFCDASCLLRWSPAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDNMGPNTGVHVVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGRGVYGDLHCNWRGLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPPLAIGSNPT---LELGSVGKTEPPTALPSGAATEASAVDVASTALTDSAAFSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINASRVEHSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLRGIVRARTRTN---------KGGPGNDLADDLTGDLAALAASHNEYASVHVP 2094
I NVGF DV+ V A+ + TLFIHGST GG N AR + D + G RF GH CGA DP+ +G CR CYT +E ALA +R L + + G HV+MC TG PP A S CS C S D VCD RCG G+YGD +C+W GLG CR CF++ A AD I+KT G RVI+C THEPPL++GS + +LG G P+ E+ D +A + G+ +MC F+ GYF L ET + VSSVL FMPGM+V +ATHP DF VFNRTLG P V++ NASRVEH A+ AD+ CG TRLIYYM VGEVLSR FT KDTH GDLIVS T S E R+A + +LLGF P FTYG+DLILPAE N+QLR ++ + + N K + LA++A SH A++++P
Sbjct: 41 ITNVGFFDVNDTYVADAILQETLFIHGSTASGGRVANPTPKATPARFSRTCTDACSSVHSPGSXXXXXXXXXXXXXXXXXXXXX--RFRGHNCGAGDPSLYGSTCRSCYTDEEEALAADRSLGNASSDPLLAGAHVIMCDTGEPPQASS-CSPACRSMADTVCDSRCGTGLYGDYNCDWLGLGLTCRRCFQETSVAEFADSIAKTRGQRVILCATHEPPLSVGSLKSHIKAKLGHGGGXXGDANAPTTFPLESDTSD------RSTAVYVGSATIKQMCVFLRGYFDLLAETRLSVSSVLEFMPGMRVAVATHPRDFQVFNRTLGYLPDVTIENASRVEHGALIADQICGNGTRLIYYMNVGEVLSRTFTRKDTHGVLGDLIVSATDSAQVPLEHARRAAGSAVLLGFTTPAFTYGTDLILPAETNEQLRAVLHTKAKLNELVVVQAQGKHRRSRKKLGFMFEYLASVAHSHRSSATIYIP 512
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: A0A6H5L131_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE) HSP 1 Score: 308 bits (790), Expect = 4.520e-91 Identity = 220/618 (35.60%), Postives = 305/618 (49.35%), Query Frame = 1
Query: 199 CFERTKAVFANLTK------QENVYPKGPSVMFYKMFLDRDVARALEGYDALAVVEWDVVVAHPTSFEMLYKSAFFSSEEFWMKGSTLAGAEFHETAGLSEMWHILGHLNGNAIYNNTDPGFHEFVNFTLNRWQYQYSYDVALWATIADFPYSWPLWQRYSSKFVATQLIANVG-FHDVSQPEVGMAVSRNTLFIHGSTGGGGGTTNHAVAHAKARVAAVAPDCARACGGAGKLEISGMSTFCDASCLLRWSPAGPRFGGHGCGADD------PTRFGEDCRRCYTSQEAALAEERKLSSPDNMGPNTGVHVVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGR-GVYGDLHCNWR--GLGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEPP------LAIGSNP-TLELGSVGKTEPPTALPSGAATEASAVDVASTALT--DSAA---FSGNIARGEMCAFMVGYFAFLEETSVGVSSVLHFMPGMKVGIATHPTDFDVFNRTLGKFPTVSVINASRVEHSAVHADKACGPRTRLIYYMEVGEVLSRPFTPKDTHSSRGDLIVSFTSSESGHQECDRQAKAADILLGFYPPCFTYGSDLILPAELNQQLR 1968
CF LTK Q++VYPK PS+MFYKMFLD V +L YDAL+++E DV+VA SFE LY +AF +EEFW+KGS L G F +A SEMW +LGH+NGNAIYNN DP F E+V +T RW Y++ YDVALW TI+DFPYS PL+QRYSSKFV T L+ N + + +P+ G + N ++ + T + ++ A V V +IS + + + AG HG D P + N G + C+ G K +D T VCD C R V+G L C + G CR C+ D +AH D T G+R IMC T P L+I + +L++G + E G+ V ++ + AA F ++ RG +CAF+ G V V S+L FMPGM+V IA D + R++G P V++ + +++ AD+ CG T LI Y+E G VLSRPFT KDTHS RGDL+V + ++ D +++ + ++LG P FT G+DL+LP N+ LR
Sbjct: 7 CFSCALQDMCALTKTDLSIAQDDVYPKAPSIMFYKMFLDESVRFSLSEYDALSIIEPDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFPSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSRPLYQRYSSKFVVTNLVGNYSRYTTMIRPQPGEGMRPNPPPLYWVSNNNSPTVDFSMP-APLHVRYV-------------FKISYVGDEHVTQDTVSDAVAGKTLFIHGGDVADVITASAPXXXXXXXXXXXXXXXXXXXXXXXXXRGNRRRGNDGDETLKCTDG----CKYTSND---GTRGRVCDANCSRRDVHGTLGCGTKDGAYGTECRACYNDGDEAHKQD----TPGNRAIMCSTVMPVDVRSLWLSIDNEDYSLQIGQAMEGEDGEEEVEGSFERVGVDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRN-DERSRRSGLVLGLEAPSFTRGTDLMLPVGANKDLR 598
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Match: A0A6H5LJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 308 bits (789), Expect = 5.690e-88 Identity = 180/449 (40.09%), Postives = 235/449 (52.34%), Query Frame = 1
Query: 4 RNLAVVVPTHSGDLEGAIAALELWPKVCSAPTLHHMHLVVYYSGSAGDGVWNEDIISTVARTGGRCFERTKAVFANLTKQENVYPKGPSVMFYKMFLDRDVARALEGYDALAVVEWDVVVAHPTSFEMLYKSAFFSSEEFWMKGSTLAGAEFHETAGLSEMWHILGHLNGNAIYNNTDPGFHEFVNFTLNRWQYQYSYDVALWATIADFPYSWPLWQRYSSKFVATQLIANVGFHDVSQPEVGMAVSRNTLFIHGSTGGGGGTTNHAVAHAKARVAAVAPDCARACGGAGKLEISGMSTFCDASCLLRWSPAGPRFGGHGCGADDPTRFGEDCRRCYTSQEAALAEERKLSSPDNMGPNTGVHVVMCSTGSPPAAKSECSDECVSTGDAVCDYRCGRG-VYGDLHCNWRG--LGQNCRFCFRDYFDAHLADEISKTNGSRVIMCDTHEP 1341
+ L VVVPT+ GDL A+++LE WP CS TL + LV+YY+ + +++ T GRCF RT+ VFANL +++++YP+GPSVMFY MFLD DV +L YDAL+++EWDV+VA SFE LY +AF +EEFW+KGS L G FH A EMW +LGH+NGNAIYNN DP F E+V +T RW Y++ YDVALW TI+DFPYSWPL+QRYSSKFV T LI++VG+ V+ V A++ NTLFIHGS+ G ++ A V A + + + + +W + T G SPD G C G +K T VCD C R YG L C + G +CR C+ D A D T +R IMC T P
Sbjct: 28 QQLGVVVPTYKGDLARAVSSLERWPAKCSPLTLENADLVLYYAEEESSAT--ASALDSISSTAGRCFARTRIVFANLAEEDDIYPQGPSVMFYNMFLDEDVRSSLSEYDALSIIEWDVLVASDNSFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWQLLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAIAGNTLFIHGSSVDEGNVASYEATEGDASVDVTATQ---------RHLTEDVPKWKEQE---KWKTSXXXXXXXXXXXXXETDDG-----VXXXXXXXXXXXXXXXSPDEEG---------CMNGCEYTSKD-------GTRGRVCDSNCSRSDAYGTLGCGAKSGKYGADCRACYNDVEKARKQD----TPANRAIMCSTKMP 437 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig83.16077.1 >prot_C-linearis_contig83.16077.1 ID=prot_C-linearis_contig83.16077.1|Name=mRNA_C-linearis_contig83.16077.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=703bp MRNLAVVVPTHSGDLEGAIAALELWPKVCSAPTLHHMHLVVYYSGSAGDGback to top mRNA from alignment at C-linearis_contig83:729946..736049- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig83.16077.1 ID=mRNA_C-linearis_contig83.16077.1|Name=mRNA_C-linearis_contig83.16077.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6104bp|location=Sequence derived from alignment at C-linearis_contig83:729946..736049- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig83:729946..736049- >mRNA_C-linearis_contig83.16077.1 ID=mRNA_C-linearis_contig83.16077.1|Name=mRNA_C-linearis_contig83.16077.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4218bp|location=Sequence derived from alignment at C-linearis_contig83:729946..736049- (Chordaria linearis ClinC8C monoicous)back to top |