mRNA_C-linearis_contig83.16074.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig83.16074.1
Unique NamemRNA_C-linearis_contig83.16074.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: D7FLY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLY2_ECTSI)

HSP 1 Score: 269 bits (688), Expect = 1.710e-81
Identity = 248/368 (67.39%), Postives = 265/368 (72.01%), Query Frame = 2 
Query:  116 KKKGSKRRKRVAAHIREN-QGKRAAAAASGEGEVGADKRAPLLAPPLGVGKSKRPREPDAVATGVAARDNPARKEKERTDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKGAGRQAMLAAAQEIIDKHGPDEGNEQTAAAREAARDAXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFSFSFFDGKAPKTTGVGAPAKKQQPDSDSGSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRKARSALTGESKAAAKAKAAAVAYERALQVAEVLA 1216
            KKK +K++KRVA HIREN +GKR AAA S +GEVGADKRAPLLA PLGVGK KRPREP   A+   A+D+PARKEKERTDA NYL AWL++RKA EAAEEAGV PP + GVWKFNKNTQAWLLR+VFSDD I +K F TLCLYLEGLKGAGRQ +LAAAQ IIDKHGPDEG EQTAA REAA                 XXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       EFSF FFDG A + T                 +     XXXXXXXXXXXXXXXXXXXXXX            RKARSALTG+ KA AKAKAAAVAYERALQVAEVLA
Sbjct:    4 KKKSTKKKKRVAVHIRENIKGKREAAA-SADGEVGADKRAPLLAAPLGVGKPKRPREPADAASLGKAKDDPARKEKERTDANNYLVAWLTVRKANEAAEEAGVAPPPATGVWKFNKNTQAWLLRHVFSDDEIDDKRFETLCLYLEGLKGAGRQRVLAAAQAIIDKHGPDEGKEQTAAEREAA------------VAEVTXXXXXXXXXXXAAVVPSGYNSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARTGNAGEFSFGFFDGTAEEAT-----------------SKTTGKXXXXXXXXXXXXXXXXXXXXXXAVEALAPATKKPRKARSALTGKPKAEAKAKAAAVAYERALQVAEVLA 341
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A7S2YR22_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YR22_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.010e-8
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 2 
Query:  305 VAARDNPARKEKERTDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKG 559
            V ++ N  +K K+ TD + YL  W   + A +A EE       +   WKFNKNTQ+WL+R+ +  D + + +F  L  YLEGLKG
Sbjct:   93 VTSQSNKPQKLKDPTDVSAYLTNWKKCQSA-DATEE-------TKANWKFNKNTQSWLIRHAYETDKVPKATFTILLEYLEGLKG 169
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A812TZ63_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812TZ63_9DINO)

HSP 1 Score: 63.5 bits (153), Expect = 1.070e-7
Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 2 
Query:  311 ARDNPARKEKERTDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKGAGRQAMLAAAQEIIDKHGPD 619
            ARDN   K+ E  +A++YL AW       +A ++ G P       W+FNK TQAWLLR+ +  + + ++ F  L  YL GL G  R   LA A  ++   G +
Sbjct:   76 ARDNAKTKDPE--EASSYLTAW-------QAHQDVGTP-------WRFNKATQAWLLRHAYEPELVPKQVFRILLRYLAGLSGVARDRALAEASTLVTLKGSE 162
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A812Z176_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Z176_9DINO)

HSP 1 Score: 63.2 bits (152), Expect = 2.070e-7
Identity = 38/109 (34.86%), Postives = 57/109 (52.29%), Query Frame = 2 
Query:  332 KEKERTDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKGAGRQAMLAAAQEIIDKHG---PDEGNEQTAAAR 649
            K K+  +A++YLAAW       +A +++G         W+FNK TQAWLLR+ +  + + +K F  L  YL GL GA R   +A A  ++   G   P  G  Q+ + R
Sbjct:  109 KTKDPEEASSYLAAW-------KAHQDSGT-------AWRFNKATQAWLLRHAYEPEMVPKKVFQLLLRYLAGLSGAARDRAVAEAGALVTLQGAEVPKAGATQSKSVR 203
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A1E7EPA5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPA5_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.540e-7
Identity = 37/108 (34.26%), Postives = 52/108 (48.15%), Query Frame = 2 
Query:  347 TDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKG--------------AGRQAMLAAAQEIIDKHGPDEGN 628
            T+A  YL  W + +  K A+  + V       +WKFNKNTQ+WL+RN++  D + + SF  L  YL+GL+G              A R    +   E  DK G D  N
Sbjct:   68 TEAFTYLTQWKANKSNKNASSLSKV------SIWKFNKNTQSWLIRNMYEVDKVAKPSFLLLLEYLKGLEGETTKDRIKAEASRRARRYKEYSKTSEDKDKEGNDNSN 169
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A813CLC2_9DINO (C7orf50 protein (Fragment) n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A813CLC2_9DINO)

HSP 1 Score: 62.4 bits (150), Expect = 3.250e-7
Identity = 41/114 (35.96%), Postives = 59/114 (51.75%), Query Frame = 2 
Query:  332 KEKERT----DATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKGAGRQAMLAAAQEIIDKHG---PDEGNEQTAAARE 652
            +EK RT    +A++YLAAW       +A ++ G         W+FNK TQAWLLR+ +  + + +K F  L  YL GL GA R   +A A  ++   G   P  G  Q+  AR+
Sbjct:  102 REKARTKDPEEASSYLAAW-------KAHQDLGT-------AWRFNKATQAWLLRHAYEPELVPKKVFQLLLRYLAGLSGAARDRAVAEAGALVTLQGAEVPKAGATQSKPARQ 201
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A7S2IRE0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2IRE0_9DINO)

HSP 1 Score: 61.6 bits (148), Expect = 7.350e-7
Identity = 38/112 (33.93%), Postives = 55/112 (49.11%), Query Frame = 2 
Query:  338 KERTDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKGAGRQAMLAAAQEIIDKHGPDEGNEQTAAAREAARDAXV 673
            KE   A +YL  W     AK+A E +         VW+FNK TQAWLLR+ +    + ++ F TL  Y+ GL+GA R+  LA A  ++   G      +  A ++  R   V
Sbjct:  126 KEPEVAADYLRTWA----AKQAGEAS---------VWRFNKATQAWLLRHAYDPARVAKEVFQTLLGYIVGLQGAARERALAEAGSLVASGGAPASPPEPEALKQNKRQKKV 224
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A812YMC9_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812YMC9_9DINO)

HSP 1 Score: 62.0 bits (149), Expect = 2.030e-6
Identity = 37/103 (35.92%), Postives = 55/103 (53.40%), Query Frame = 2 
Query:  311 ARDNPARKEKERTDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKGAGRQAMLAAAQEIIDKHGPD 619
            AR+N   K+ E  +A++YLAAW       +A ++ G         W+FNK TQAWLLR+ +  + + +K F  L  YL GL GA R   +A A  ++   G +
Sbjct:  397 ARENARTKDPE--EASSYLAAW-------KAHQDLGT-------AWRFNKATQAWLLRHAYEPELVPKKVFQLLLRYLAGLSGAARDRAVAEAGALVTLQGAE 483
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: A0A7S1Y802_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y802_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.770e-6
Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 2 
Query:  431 ASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGL 553
            +S+GVWKFNKNTQ+WL+RN++  D + + +F  L  YL+G+
Sbjct:    4 SSSGVWKFNKNTQSWLIRNMYDTDKLSKPTFAILLEYLQGM 44
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BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Match: B8BW91_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW91_THAPS)

HSP 1 Score: 58.2 bits (139), Expect = 1.020e-5
Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 2 
Query:  320 NPARKEKERTDATNYLAAWLSLRKAKEAAEEAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYL 544
            +PA K K+  +A +YL  W   R  K+         P S+G WKFNKNTQ+WLLR+++  D + + ++  L  Y+
Sbjct:   72 SPASKTKDPEEAASYLRLWKYDRDNKKTN-------PKSSGTWKFNKNTQSWLLRHMYDADKVNKTTYTLLIEYI 139
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FLY2_ECTSI1.710e-8167.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2YR22_9STRA9.010e-840.00Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A812TZ63_9DINO1.070e-735.92Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812Z176_9DINO2.070e-734.86Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A1E7EPA5_9STRA2.540e-734.26Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A813CLC2_9DINO3.250e-735.96C7orf50 protein (Fragment) n=3 Tax=Symbiodinium Ta... [more]
A0A7S2IRE0_9DINO7.350e-733.93Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A812YMC9_9DINO2.030e-635.92Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S1Y802_9STRA4.770e-651.22Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B8BW91_THAPS1.020e-537.33Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:698098..703245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.9
Seed ortholog evalue4.3e-70
Seed eggNOG ortholog2880.D7FLY2
Preferred nameC7orf50
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013
EggNOG free text desc.Uncharacterised conserved protein (DUF2373)
EggNOG OGsKOG4829@1,KOG4829@2759
Ec32 ortholog descriptionProtein of unknown function DUF2373
Ec32 orthologEc-22_000160.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1861
Cds size1110
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930620.3069656-UTR-C-linearis_contig83:698097..6982061622930620.3069656-UTR-C-linearis_contig83:698097..698206Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 698098..698206 +
1690881163.3447003-UTR-C-linearis_contig83:698097..6982061690881163.3447003-UTR-C-linearis_contig83:698097..698206Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 698098..698206 +
1622930620.4022765-UTR-C-linearis_contig83:702603..7032451622930620.4022765-UTR-C-linearis_contig83:702603..703245Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 702604..703245 +
1690881163.4183774-UTR-C-linearis_contig83:702603..7032451690881163.4183774-UTR-C-linearis_contig83:702603..703245Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 702604..703245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930620.3253522-CDS-C-linearis_contig83:698206..6983841622930620.3253522-CDS-C-linearis_contig83:698206..698384Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 698207..698384 +
1690881163.360697-CDS-C-linearis_contig83:698206..6983841690881163.360697-CDS-C-linearis_contig83:698206..698384Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 698207..698384 +
1622930620.337939-CDS-C-linearis_contig83:699126..6992091622930620.337939-CDS-C-linearis_contig83:699126..699209Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 699127..699209 +
1690881163.3702676-CDS-C-linearis_contig83:699126..6992091690881163.3702676-CDS-C-linearis_contig83:699126..699209Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 699127..699209 +
1622930620.3527963-CDS-C-linearis_contig83:699716..6998511622930620.3527963-CDS-C-linearis_contig83:699716..699851Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 699717..699851 +
1690881163.3807583-CDS-C-linearis_contig83:699716..6998511690881163.3807583-CDS-C-linearis_contig83:699716..699851Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 699717..699851 +
1622930620.3692126-CDS-C-linearis_contig83:700429..7004991622930620.3692126-CDS-C-linearis_contig83:700429..700499Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 700430..700499 +
1690881163.3949318-CDS-C-linearis_contig83:700429..7004991690881163.3949318-CDS-C-linearis_contig83:700429..700499Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 700430..700499 +
1622930620.3869028-CDS-C-linearis_contig83:701959..7026031622930620.3869028-CDS-C-linearis_contig83:701959..702603Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 701960..702603 +
1690881163.406817-CDS-C-linearis_contig83:701959..7026031690881163.406817-CDS-C-linearis_contig83:701959..702603Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 701960..702603 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16074.1prot_C-linearis_contig83.16074.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig83 698207..702603 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig83.16074.1

>prot_C-linearis_contig83.16074.1 ID=prot_C-linearis_contig83.16074.1|Name=mRNA_C-linearis_contig83.16074.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=370bp
MTKKKGSKRRKRVAAHIRENQGKRAAAAASGEGEVGADKRAPLLAPPLGV
GKSKRPREPDAVATGVAARDNPARKEKERTDATNYLAAWLSLRKAKEAAE
EAGVPPPASNGVWKFNKNTQAWLLRNVFSDDPIGEKSFGTLCLYLEGLKG
AGRQAMLAAAQEIIDKHGPDEGNEQTAAAREAARDAAVLEAAAADAADAA
EEAAAAVAPSGYNSDSADDGGEGESDSGGKAVAAAGGQGGGGVVMPQPVA
AGVIDGGGGGGGEFSFSFFDGKAPKTTGVGAPAKKQQPDSDSGSTSSSDD
SEDGSDDDNDDEGQNGAGGADGAAEASPPAAKKQRKARSALTGESKAAAK
AKAAAVAYERALQVAEVLA*
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mRNA from alignment at C-linearis_contig83:698098..703245+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig83.16074.1 ID=mRNA_C-linearis_contig83.16074.1|Name=mRNA_C-linearis_contig83.16074.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5148bp|location=Sequence derived from alignment at C-linearis_contig83:698098..703245+ (Chordaria linearis ClinC8C monoicous)
ACGTCCCTCTCCCCTGTGCGCCTCCCGCCTCTCACGCCCTTGTATACGCA
CACACTCACACACAAGGCTCTAGCCTGCCTCGCGTCCCTGCGCGTAGCTA
GCAAACAAAATGACGAAGAAGAAAGGGAGCAAGAGGAGGAAGCGTGTGGC
AGCGCACATCCGTGAGAACCAGGGCAAGAGAGCAGCTGCGGCCGCCTCGG
GGGAAGGCGAAGTCGGCGCGGACAAGCGAGCGCCCCTTCTGGCACCTCCT
CTTGGTGTCGGGAAGTCGAAACGCCCTCGAGAGCCAGGTCAGTGGATATT
GCTGTGTAATGCTGTAGCCATGCTGCACCGCTTGCGGGTGGTGCCCATAT
TGTTGGTGGACACACCTCCTGACCGCAATAACAGATGTGGGATGTGGGCC
CGATGTGTTGTTACGGTTGTTGCAGGTTTGTTTTGAGTGATCTGTGTATG
CCTAGATGGTGGTACTACCCAGCTGATATCCGTTTTCCGCCGGAGCTGGT
ATGTGTGTACACATATGATACACGTAAAGGTTTCATCCCACACAAAATGT
CCGCTTGCTGTGTCCGGTCTGGTACCTGCGCGCTCGTCTCACATTTGCGA
GCGTAACAGAGAGTGCAATTTAGCGAGACATGCGCGAAAGATGCTGTGGT
AAATACATGCTGTATGGTGGAAATGCCTCCATCGCCGTGAAACTGAAAGG
TCTGCACGACCAAGCGGGATGAGTCCTACTTGTAGCCTGCGGTCACCACC
CACCGCATCCTTACGAGTTTCTTCCCACGCCGTGCGTGTGGTTCACAAGG
CGCCACCAGTCTCCCTTCGATATCCCGTTGCCCCCAATGCACACCGGCAT
GGTTTGTGCGCCGAAAACGCTCGGCGCCTGGCGTGTCGTGCCTTACACAG
GGTTCGTTGGCAATGCTCCATGTACTGTCGTGTGAAATGATGCGCCCGCT
CTCTCTTTCTCTCTCTCTCTCTCTCTCTGCCTGTCTCCCGGCCGGGGCCG
CCGTTGCTCTCTGCTTTTTGCTCAACCAGACGCTGTGGCGACGGGCGTCG
CCGCCAGAGACAACCCTGCCCGGAAGGAGAAGGAACGCACTGACGCTACC
AACTACCTCGCGGTGAGAGAATAGACTGTACACCGGAGATTGGGGTGTTT
GGAGGGGACGACGCATTGATGTTCGGAATTGGGTCCAGCACTGAATACCG
CGAGGTGAACTGGTTTTCGCACATTCACTCTCAGTCGTTCAGCCTGTGTG
CGAGCTCGACGGACATGGCTGAAAAGCTCAGCGCGGGTGCCTAAACATGT
GATGACGCGCAACGTAGGGATCAGTCCCCGAGGGATGTCTGCTACATATG
CGATGATAGATTTCAGATTTCCCAGTTGGTTGGTCCGCTAGCCTCGTGTC
TGCAGCTTGTAGGTGTATCCTCTCTTGTTTTCGGGTAAACCTCAGTATAG
GTGGCATCGCAACGTCACAACGAGGCATCTAATACCCCCCGTTGGATCTG
AAATCGTCCGTGCGTCGTGCCTATCTCTCGCGCAGCCCGTGCGATGCATG
TTGCGGTTTACGGTTAGCATCTGATGTAACGGTGCTTTTTTGCGCCTTCT
TTGTGCTGGTCGCATGCAGGCGTGGCTTTCCCTGCGCAAGGCGAAAGAAG
CCGCGGAGGAAGCGGGGGTGCCGCCGCCCGCCTCGAACGGAGTGTGGAAG
TTCAACAAGAACACCCAGGCGTGGCTGCTGCGAAACGTTTTCTCCGATGA
CCCGGTCAGCGCTGCTCTTTAGCTGTGAACGGAGAGAGATAATTCCCTCG
TCTTCTCTGCCGTCCATTGTTTTCATGGTCACTATCACCCGTCATGTGTC
CCTAGTTCGAGGTTTGTTGTCATCTCCGGCGTGCAGGTAGTTTACTCCAA
CTGGTGGCACCGTCGGACACACTAGTCCCCCCCCGGACCAGCGTTTGAAG
TTTTCCTGAATGGTCCACGAAACCGGATGCGCCAATGACCAGGAGGGCCC
CTGTGGCTTAATTTCATTGATACCTTTCTGTAGCTGTTCGATCGGTTGGG
CATCGCGAAACCTCGTTTGTTGGGCAGTCTTGGTTGGGATATCGTTATTT
TAGGGGGGGGTCTCATGGTTCCTATTGGGGTGCTTGCTACCCATGGTGAA
GAATATCTCCTGCCCTGCTTTCTCGCGGTGTTGGTCTAGTTATCTGGTGT
CGTGCTCGTCGTTGCAGCACATGGACTTCTGGTGTTTGTGGACATCGTGC
ACCAGACTCAGCGAGGTTGATCGGGCATCGCATCGTCTGTTGTATCGCAC
GGGCCATTGTTTTTTTGTTTTTCACCGATCAGATCGGCGAGAAGAGCTTT
GGGACTCTCTGCCTCTACCTCGAAGGGCTCAAGGGTGCTGGTCGACAGGC
GAGTAAACTTCAACCATGTGTCAGATCAAGATTGTCGAGACGCCATACTC
AGCTTTCCGTGTCGAGGTAGCGTAGACTGCTCTGTGCTCTCTACGATTGA
ACTGTCGTAGGCCTTTTTTGCATGAAAACCTGCTGTGTTCCCTTAATACC
CTTAATACCCTTAATACCGAACCTGTTGTAAAGGGGGTACTGCACGCATG
TACTCTGAGCATGCCTCGTATTCGTATGCGTGCATCTTGTGGATGCGCGC
CGGCCACTTTCTCCTCCCTCCTTTTGCCAATTTTACTGCGCAATAGCACA
AACCGCCAGGGTGTACCGGCCGCATCAAGCATAATAGGTCATGCCTGGAT
AGCCGTAGGAAAACTAAGCATGCCGTCTTTTCTTGGGCGTAGATGTGTAT
ATACTTGTATATGACTGCTGTGGAATCGCCTGATTGGCTGATTGGTAGAA
TGATTCAGCTTTTGGCGTTGCGACCGTGCTGTGGTCAAGAGAGATTGATG
GCCAAACAGAATCAGGCCTACCATTGTTTCACTGTTTCGACGTGGACTGG
CGTCAAATAATTATTACAACACAGAGAGCACAGAACCCACAACCCACAAC
CCACATGCCTTCCGAATGACGAAAGGTTTATCAGCTGACGTCGGGGTTTT
GACCTCGTCCCTTTGATGCCTTTTTAAAGAAAAAGTTTGTATTCTCCGAC
GGAAGGGGTGGGTTTCGTGATGTTTTGATGCATGCAGAGTTGTTCTTGGT
GCCATGTTGGTATGGTCGTCGGGACCACCTTTGTCCGCGATTTTTCGATT
TTTCTACCTCCATGGTACACAGAGGGGATCCCCATGTCTTGCTTGTGTCT
GGGAGCGGGCAAGCTCCTTTTTTTCTTTCTTTTTTTTTTTCGTCTTCACA
TTTAGTTCCAGAGTTCGCAGGGGCGCCTTGCCACGCGGGGCATCTTGCCA
AGACATCTGAACCGTGGCCACCCAAAAGGACCCTCTCCCTGAGGCCCCCA
CCCACCTTCTGCGATGCTTGCCTGGTCATTTTTAACGCGAGAGAGTTTCA
GCCGTCTCTCCCTCAAGTGTACACACGAACTAAGCGCTTTCCACTGACAG
GAACGAAAGCGAGAGAAAAAAATCACGTTGTGCGAGAAAGAATCGCTTGC
GCCGGGATTCGAACCCGTGAACCTGCATGCTAGATGGTTACGGTGAAACC
ACTAGACCACCGGGGCGACCGGAATCTTTCTTGTTGAAGAACAAGAAAAA
GCTCCATTCCTGGTAGATTTTTGTATCCCACCTCCTGCCTTGGACTTCAT
ATAGGTGGCAAGATACGGTCCTCTTACCCCCCGTCCGCGGTCAGACTCAA
CACCAAGCGTATCCACATGATGATGTGTCCCTCCCCATAGCTCACCTAGC
TCTGGTTACCCCCCGCTGGCCGCAATATGTAATGTCCCCTGTATACCCGT
CACCGCAGCGAGTGCTAGCCGCCGCACAGGAGATCATCGACAAACACGGC
CCCGACGAGGGGAACGAGCAGACGGCGGCGGCAAGAGAGGCGGCACGCGA
TGCAGCAGTGCTCGAGGCGGCGGCAGCTGACGCGGCAGATGCCGCAGAGG
AAGCGGCGGCTGCGGTCGCGCCGAGCGGGTACAACAGTGATTCCGCTGAC
GACGGAGGGGAGGGGGAGAGTGACAGCGGGGGAAAGGCCGTTGCGGCCGC
GGGTGGGCAGGGGGGCGGGGGGGTAGTAATGCCCCAGCCAGTGGCGGCAG
GGGTCATCGACGGCGGCGGCGGAGGCGGCGGCGAGTTTTCTTTCTCGTTC
TTCGATGGGAAAGCCCCCAAGACCACTGGTGTTGGGGCACCGGCAAAAAA
ACAGCAGCCCGACAGCGATAGCGGTAGCACCAGCAGTAGTGACGATAGCG
AAGATGGTAGCGACGACGATAACGATGATGAGGGGCAGAATGGGGCGGGT
GGCGCAGACGGGGCGGCTGAGGCCTCTCCGCCTGCCGCGAAGAAGCAACG
AAAAGCCCGGTCGGCACTGACCGGGGAGTCGAAAGCGGCGGCCAAAGCGA
AGGCGGCCGCGGTAGCTTACGAGAGAGCCTTGCAGGTGGCCGAGGTGCTT
GCTTAGAGTCGCAGTTATGGGCTACTTTGATGGATGCCTGTGTTGTTTTC
TTCTTGTGTAGTGCTCGGAAGCTGCTTGGCTCATCGGTTCGTGGGGAGTT
CGGTGCTGAAGCGACTCATTCCTGTCGAGGCGGTTGTCGGCCTCCTGTTG
GTGGTTATGTATTGATATACGGAGTACTTTTTATCTGGTTTTGAATCGCT
GGTCTTGCCTGTTGATATACTCCGGAGTATGAGCCATGTGTACCGCTCGC
GGTTTTTGCAGCTATGTCAGTTTCCGGGTACCGGAAATTTCCGCAAACAA
TGTTCAGTGGTCGGTACTGGTGTGATGGAAATTGCTGTGAGGGAAATTTG
CGGATTAATTTTTTTATTTCCGGGGGGCCCTCCGGAGGGGGCGGAGTGGT
GCTTATCTCCTATCTCCTGTGCCCCCTATAAGAGTCTTAGCCTTCACACA
TTAGCACATTAGCACCATATCAGTAGATCAGGGATTCTTCTCTCGTCACT
TTTTGCTTTGTATGTCTCTTCTTGTTTTCCTATTTTTTGCAGTTTTTGTC
ATCCTTCACTCACTATAAGTAGGCTGAAAAAATGAAAGAATGCATTGCAA
CGCACCAACGTGTTATAAAGCAAGGATGGAAGTTACTCCGAATTTTCC
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Coding sequence (CDS) from alignment at C-linearis_contig83:698098..703245+

>mRNA_C-linearis_contig83.16074.1 ID=mRNA_C-linearis_contig83.16074.1|Name=mRNA_C-linearis_contig83.16074.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2220bp|location=Sequence derived from alignment at C-linearis_contig83:698098..703245+ (Chordaria linearis ClinC8C monoicous)
ATGACGAAGAAGAAAGGGAGCAAGAGGAGGAAGCGTGTGGCAGCGCACAT
CCGTGAGAACCAGGGCAAGAGAGCAGCTGCGGCCGCCTCGGGGGAAGGCG
AAGTCGGCGCGGACAAGCGAGCGCCCCTTCTGGCACCTCCTCTTGGTGTC
GGGAAGTCGAAACGCCCTCGAGAGCCAGATGACGAAGAAGAAAGGGAGCA
AGAGGAGGAAGCGTGTGGCAGCGCACATCCGTGAGAACCAGGGCAAGAGA
GCAGCTGCGGCCGCCTCGGGGGAAGGCGAAGTCGGCGCGGACAAGCGAGC
GCCCCTTCTGGCACCTCCTCTTGGTGTCGGGAAGTCGAAACGCCCTCGAG
AGCCAGACGCTGTGGCGACGGGCGTCGCCGCCAGAGACAACCCTGCCCGG
AAGGAGAAGGAACGCACTGACGCTACCAACTACCTCGCGACGCTGTGGCG
ACGGGCGTCGCCGCCAGAGACAACCCTGCCCGGAAGGAGAAGGAACGCAC
TGACGCTACCAACTACCTCGCGGCGTGGCTTTCCCTGCGCAAGGCGAAAG
AAGCCGCGGAGGAAGCGGGGGTGCCGCCGCCCGCCTCGAACGGAGTGTGG
AAGTTCAACAAGAACACCCAGGCGTGGCTGCTGCGAAACGTTTTCTCCGA
TGACCCGGCGTGGCTTTCCCTGCGCAAGGCGAAAGAAGCCGCGGAGGAAG
CGGGGGTGCCGCCGCCCGCCTCGAACGGAGTGTGGAAGTTCAACAAGAAC
ACCCAGGCGTGGCTGCTGCGAAACGTTTTCTCCGATGACCCGATCGGCGA
GAAGAGCTTTGGGACTCTCTGCCTCTACCTCGAAGGGCTCAAGGGTGCTG
GTCGACAGGCGAATCGGCGAGAAGAGCTTTGGGACTCTCTGCCTCTACCT
CGAAGGGCTCAAGGGTGCTGGTCGACAGGCGATGCTAGCCGCCGCACAGG
AGATCATCGACAAACACGGCCCCGACGAGGGGAACGAGCAGACGGCGGCG
GCAAGAGAGGCGGCACGCGATGCAGCAGTGCTCGAGGCGGCGGCAGCTGA
CGCGGCAGATGCCGCAGAGGAAGCGGCGGCTGCGGTCGCGCCGAGCGGGT
ACAACAGTGATTCCGCTGACGACGGAGGGGAGGGGGAGAGTGACAGCGGG
GGAAAGGCCGTTGCGGCCGCGGGTGGGCAGGGGGGCGGGGGGGTAGTAAT
GCCCCAGCCAGTGGCGGCAGGGGTCATCGACGGCGGCGGCGGAGGCGGCG
GCGAGTTTTCTTTCTCGTTCTTCGATGGGAAAGCCCCCAAGACCACTGGT
GTTGGGGCACCGGCAAAAAAACAGCAGCCCGACAGCGATAGCGGTAGCAC
CAGCAGTAGTGACGATAGCGAAGATGGTAGCGACGACGATAACGATGATG
AGGGGCAGAATGGGGCGGGTGGCGCAGACGGGGCGGCTGAGGCCTCTCCG
CCTGCCGCGAAGAAGCAACGAAAAGCCCGGTCGGCACTGACCGGGGAGTC
GAAAGCGGCGGCCAAAGCGAAGGCGGCCGCGGTAGCTTACGAGAGAGCCT
TGCAGGTGGCCGAGGTGCTTGCTTAGTGCTAGCCGCCGCACAGGAGATCA
TCGACAAACACGGCCCCGACGAGGGGAACGAGCAGACGGCGGCGGCAAGA
GAGGCGGCACGCGATGCAGCAGTGCTCGAGGCGGCGGCAGCTGACGCGGC
AGATGCCGCAGAGGAAGCGGCGGCTGCGGTCGCGCCGAGCGGGTACAACA
GTGATTCCGCTGACGACGGAGGGGAGGGGGAGAGTGACAGCGGGGGAAAG
GCCGTTGCGGCCGCGGGTGGGCAGGGGGGCGGGGGGGTAGTAATGCCCCA
GCCAGTGGCGGCAGGGGTCATCGACGGCGGCGGCGGAGGCGGCGGCGAGT
TTTCTTTCTCGTTCTTCGATGGGAAAGCCCCCAAGACCACTGGTGTTGGG
GCACCGGCAAAAAAACAGCAGCCCGACAGCGATAGCGGTAGCACCAGCAG
TAGTGACGATAGCGAAGATGGTAGCGACGACGATAACGATGATGAGGGGC
AGAATGGGGCGGGTGGCGCAGACGGGGCGGCTGAGGCCTCTCCGCCTGCC
GCGAAGAAGCAACGAAAAGCCCGGTCGGCACTGACCGGGGAGTCGAAAGC
GGCGGCCAAAGCGAAGGCGGCCGCGGTAGCTTACGAGAGAGCCTTGCAGG
TGGCCGAGGTGCTTGCTTAG
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