mRNA_C-linearis_contig83.16059.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig83.16059.1
Unique NamemRNA_C-linearis_contig83.16059.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A6H5L8E8_9PHAE (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E8_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 2.450e-85
Identity = 135/154 (87.66%), Postives = 140/154 (90.91%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQC-LVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDK RME      APDHGVE+TPAPHAHWTLYEALQQPMAIARALAFGG       +VLGGLDRN++KLSK+RNLMFAACGTSLYASQYGAKLMRDMGAVDT
Sbjct:  215 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKARME-----LAPDHGVESTPAPHAHWTLYEALQQPMAIARALAFGGRMTDSSGVVLGGLDRNMEKLSKIRNLMFAACGTSLYASQYGAKLMRDMGAVDT 363
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BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: D7G5I8_ECTSI (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I8_ECTSI)

HSP 1 Score: 265 bits (677), Expect = 1.090e-82
Identity = 135/154 (87.66%), Postives = 139/154 (90.26%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQC-LVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDK RME      APDHGVE+TP PHAHWTLYEALQQPMAIARALAFGG       +VLGGLDRN+DKLSK+RNLMFAACGTSLYASQYGAKLMRDMGAVDT
Sbjct:  238 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKARME-----LAPDHGVESTPDPHAHWTLYEALQQPMAIARALAFGGRMTDSSGVVLGGLDRNMDKLSKIRNLMFAACGTSLYASQYGAKLMRDMGAVDT 386
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BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A6H5KT91_9PHAE (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT91_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 2.440e-54
Identity = 98/153 (64.05%), Postives = 118/153 (77.12%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            +VVACNGSPMVIGL    I+VASETAAF+RHTKNFIAM+DGEI VI    CSLD +RME    +++    +  +PAP+AHWT+ E LQQP AIARALAFGG   +  +VLGG DR+  +LS V+NL+ AACGTSLYAS YGAKLMRD+ A+DT
Sbjct:  332 IVVACNGSPMVIGLAQGEIFVASETAAFSRHTKNFIAMKDGEIGVIGTGGCSLDVSRME----KSSHTEDILLSPAPYAHWTIMECLQQPEAIARALAFGGRMSEDRVVLGGFDRSASRLSLVKNLVLAACGTSLYASMYGAKLMRDLEALDT 480
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BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A482S724_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S724_9ARCH)

HSP 1 Score: 166 bits (420), Expect = 1.460e-49
Identity = 80/153 (52.29%), Postives = 115/153 (75.16%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            ++VACNGSPM IGLG++ I++ASET+AF+++TKNFIAM+DGEI VI  +E SLD +R+E      AP+H +  TP P+ H+TL E L+QP AIARA+++G     + +VLGGLD+NVD +  +RN++   CGTS +A+++ AKLMRD+   D+
Sbjct:   27 IIVACNGSPMNIGLGSNKIFIASETSAFSKYTKNFIAMKDGEIGVIRASEHSLDLSRVE-----IAPEHEILLTPDPYPHFTLKECLEQPEAIARAMSYGARMNGKRVVLGGLDKNVDLMGTIRNMLLTGCGTSRHAAEFAAKLMRDLDCFDS 174
[Close]
BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A7S3NJL6_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJL6_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.770e-49
Identity = 92/153 (60.13%), Postives = 111/153 (72.55%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            +VVACNGSPM IGL  +  +VASETAAFNRHTKNFIAMQDGEI V+     +LD  R+EQ     AP+  ++ +PAP+AHW L E  +QP AIARALAFGG   +  + LGGLDR+ D +  +RNL+   CGTSL AS YGAKLMRD+GA DT
Sbjct:  248 VVVACNGSPMTIGLAPNKTFVASETAAFNRHTKNFIAMQDGEIGVVRAGGTTLDIGRLEQ-----APELDLKPSPAPYAHWMLREIFEQPEAIARALAFGGRLGENRVFLGGLDRSRDTMQHIRNLVIVGCGTSLNASLYGAKLMRDLGAFDT 395
[Close]
BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A7S4V436_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V436_9STRA)

HSP 1 Score: 167 bits (424), Expect = 7.240e-47
Identity = 82/153 (53.59%), Postives = 112/153 (73.20%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            LVVACNGSP+VIG+G D  ++ASET+AFNR+TKNFI+M+DGEI V+     +LD TR ++     APD  V+ +P P  HWTL E ++QP AIARAL FGG      ++LGGLD N+++LSK++ +  +ACGTSL AS+Y  +LM+ +G+ DT
Sbjct:  189 LVVACNGSPLVIGIGDDRTFIASETSAFNRYTKNFISMKDGEIGVLHADGRTLDLTRKQR-----APDQEVKLSPDPFPHWTLKECVEQPEAIARALGFGGRLSSDRILLGGLDANLERLSKIKYMTLSACGTSLNASKYAERLMKHLGSFDT 336
[Close]
BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A7S3ZVU9_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVU9_9STRA)

HSP 1 Score: 170 bits (430), Expect = 7.670e-47
Identity = 87/153 (56.86%), Postives = 107/153 (69.93%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            +VVACNGSPM IGL  +  ++ASET+AFNRHTKNFIAMQDGEI V+     SLD  R E      APD  +  TPAPHAHW   E ++QP AIARALA+GG   +  + LGGLDR  + +  +++L+   CGTS+ AS YGAKLMRD+GA DT
Sbjct:  205 VVVACNGSPMNIGLAPEKTFIASETSAFNRHTKNFIAMQDGEIGVVRAGGTSLDIRRAE-----LAPDLELRQTPAPHAHWMEREIVEQPAAIARALAYGGRLGEDRVFLGGLDRRREDMDNIKHLLLVGCGTSMNASLYGAKLMRDLGAFDT 352
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BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A7S2R8P1_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8P1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.590e-47
Identity = 87/153 (56.86%), Postives = 106/153 (69.28%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            +VVACNGSPM IGLG D  ++ASE AAFNR+TKNFIAMQDGEI V+     SLD  R E      AP+  +  TP P  HWT+ E L+QP AIARAL FGG   +  + LGGLDRN  ++ KV++++ + CGTSL AS YGAKLMR+  A DT
Sbjct:  218 IVVACNGSPMTIGLGQDKTFIASEPAAFNRYTKNFIAMQDGEIGVVRAQGTSLDLARTE-----VAPELEIRATPDPFPHWTIRECLEQPEAIARALGFGGRLSEDQVYLGGLDRNRKRMEKVKHVILSGCGTSLNASLYGAKLMREYDAFDT 365
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BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: F0YDW2_AURAN (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDW2_AURAN)

HSP 1 Score: 167 bits (424), Expect = 6.510e-46
Identity = 86/153 (56.21%), Postives = 106/153 (69.28%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            +VVACNGSPM IGL  D  ++ASET+AFNRHTKNFIAMQDGEI V+   E +LD  R E      APD  +  +PAP+ HW   E  +QP AIARALAFGG   +  + LGGLDR  D++  + +++   CGTSL AS YGA+LMRD+GA DT
Sbjct:  212 VVVACNGSPMNIGLAKDRTFIASETSAFNRHTKNFIAMQDGEIGVVRAGETTLDIRRAE-----VAPDLELRKSPAPYKHWMEREIREQPEAIARALAFGGRLGEDKVFLGGLDRQRDRMRDIEHVLLVGCGTSLNASAYGARLMRDLGAFDT 359
[Close]
BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Match: A0A7S4R837_9STRA (Glutamine--fructose-6-phosphate transaminase (isomerizing) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R837_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.040e-45
Identity = 82/153 (53.59%), Postives = 112/153 (73.20%), Query Frame = 1 
Query:    1 LVVACNGSPMVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRMEQVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLVLGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT 459
            LVVACNGSP+VIG+G D  ++ASET+AFNR+TKNFI+M+DGEI V+     +LD TR ++     APD  V+ +P P  HWTL E ++QP AIARAL FGG      ++LGGLD N+++LSK++ +  +ACGTSL AS+Y  +LM+ +G+ DT
Sbjct:  262 LVVACNGSPLVIGIGDDRTFIASETSAFNRYTKNFISMKDGEIGVLHADGRTLDLTRKQR-----APDQEVKLSPDPFPHWTLKECVEQPEAIARALGFGGRLSSDRILLGGLDANLERLSKIKYMTLSACGTSLNASKYAERLMKHLGSFDT 409
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8E8_9PHAE2.450e-8587.66Glutamine--fructose-6-phosphate transaminase (isom... [more]
D7G5I8_ECTSI1.090e-8287.66Glutamine--fructose-6-phosphate transaminase (isom... [more]
A0A6H5KT91_9PHAE2.440e-5464.05Glutamine--fructose-6-phosphate transaminase (isom... [more]
A0A482S724_9ARCH1.460e-4952.29Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S3NJL6_9STRA2.770e-4960.13Glutamine--fructose-6-phosphate transaminase (isom... [more]
A0A7S4V436_9STRA7.240e-4753.59Glutamine--fructose-6-phosphate transaminase (isom... [more]
A0A7S3ZVU9_9STRA7.670e-4756.86Glutamine--fructose-6-phosphate transaminase (isom... [more]
A0A7S2R8P1_9STRA9.590e-4756.86Glutamine--fructose-6-phosphate transaminase (isom... [more]
F0YDW2_AURAN6.510e-4656.21Glutamine--fructose-6-phosphate transaminase (isom... [more]
A0A7S4R837_9STRA1.040e-4553.59Glutamine--fructose-6-phosphate transaminase (isom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:504612..505629 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.4
Seed ortholog evalue2e-63
Seed eggNOG ortholog2880.D7G5I8
Preferred nameGFPT1
KEGG rclassRC00010,RC00163,RC02752
KEGG koko:K00820
KEGG ReactionR00768
KEGG Pathwayko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931
Hectar predicted targeting categoryother localisation
GOsGO:0000271,GO:0003674,GO:0003824,GO:0004360,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005979,GO:0006002,GO:0006022,GO:0006023,GO:0006030,GO:0006031,GO:0006037,GO:0006038,GO:0006040,GO:0006041,GO:0006042,GO:0006047,GO:0006048,GO:0006082,GO:0006091,GO:0006109,GO:0006112,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006520,GO:0006541,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0007623,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009064,GO:0009100,GO:0009101,GO:0009225,GO:0009226,GO:0009272,GO:0009719,GO:0009725,GO:0009743,GO:0009744,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010243,GO:0010383,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010675,GO:0010677,GO:0010906,GO:0010962,GO:0015980,GO:0016043,GO:0016051,GO:0016597,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019222,GO:0019438,GO:0019538,GO:0019637,GO:0019752,GO:0022607,GO:0023052,GO:0030246,GO:0030447,GO:0030448,GO:0030968,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0032501,GO:0032868,GO:0032869,GO:0032870,GO:0032881,GO:0032885,GO:0032922,GO:0033554,GO:0033692,GO:0034097,GO:0034221,GO:0034285,GO:0034620,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0034976,GO:0035690,GO:0035966,GO:0035967,GO:0036094,GO:0036211,GO:0036498,GO:0040007,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043255,GO:0043412,GO:0043413,GO:0043434,GO:0043436,GO:0043467,GO:0043933,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0045719,GO:0045912,GO:0046349,GO:0046483,GO:0048511,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051278,GO:0051289,GO:0051716,GO:0055086,GO:0055114,GO:0060255,GO:0062012,GO:0065003,GO:0065007,GO:0070085,GO:0070548,GO:0070589,GO:0070592,GO:0070873,GO:0070874,GO:0070887,GO:0071310,GO:0071345,GO:0071375,GO:0071417,GO:0071495,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071966,GO:0080090,GO:1901071,GO:1901073,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1990823,GO:1990830,GO:2000112,GO:2000113
EggNOG free text desc.glutamine-fructose-6-phosphate transaminase (isomerizing) activity
EggNOG OGsCOG0449@1,KOG1268@2759
EC2.6.1.16
COG Functional cat.M
BiGG ReactioniMM904.YKL104C,iND750.YKL104C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons4
Model size459
Cds size432
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16059.1prot_C-linearis_contig83.16059.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig83 504612..505602 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930624.475944-CDS-C-linearis_contig83:504611..5047481622930624.475944-CDS-C-linearis_contig83:504611..504748Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 504612..504748 -
1690881165.4172387-CDS-C-linearis_contig83:504611..5047481690881165.4172387-CDS-C-linearis_contig83:504611..504748Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 504612..504748 -
1622930624.4942334-CDS-C-linearis_contig83:504941..5049521622930624.4942334-CDS-C-linearis_contig83:504941..504952Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 504942..504952 -
1690881165.4295912-CDS-C-linearis_contig83:504941..5049521690881165.4295912-CDS-C-linearis_contig83:504941..504952Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 504942..504952 -
1622930624.5182288-CDS-C-linearis_contig83:505036..5051521622930624.5182288-CDS-C-linearis_contig83:505036..505152Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 505037..505152 -
1690881165.4385817-CDS-C-linearis_contig83:505036..5051521690881165.4385817-CDS-C-linearis_contig83:505036..505152Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 505037..505152 -
1622930624.5360842-CDS-C-linearis_contig83:505434..5056021622930624.5360842-CDS-C-linearis_contig83:505434..505602Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 505435..505602 -
1690881165.4474583-CDS-C-linearis_contig83:505434..5056021690881165.4474583-CDS-C-linearis_contig83:505434..505602Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 505435..505602 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930624.5520456-UTR-C-linearis_contig83:505602..5056291622930624.5520456-UTR-C-linearis_contig83:505602..505629Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 505603..505629 -
1690881165.4563255-UTR-C-linearis_contig83:505602..5056291690881165.4563255-UTR-C-linearis_contig83:505602..505629Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 505603..505629 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig83.16059.1

>prot_C-linearis_contig83.16059.1 ID=prot_C-linearis_contig83.16059.1|Name=mRNA_C-linearis_contig83.16059.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=144bp
MVIGLGTDHIYVASETAAFNRHTKNFIAMQDGEIAVITPTECSLDKTRME
QVGRRAAPDHGVETTPAPHAHWTLYEALQQPMAIARALAFGGEAKQQCLV
LGGLDRNVDKLSKVRNLMFAACGTSLYASQYGAKLMRDMGAVDT
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mRNA from alignment at C-linearis_contig83:504612..505629-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig83.16059.1 ID=mRNA_C-linearis_contig83.16059.1|Name=mRNA_C-linearis_contig83.16059.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1018bp|location=Sequence derived from alignment at C-linearis_contig83:504612..505629- (Chordaria linearis ClinC8C monoicous)
CTCGTGGTGGCCTGCAACGGGTCCCCCATGGTGATCGGCCTCGGCACGGA
CCACATCTACGTGGCCTCCGAGACCGCCGCGTTCAACCGGCACACCAAGA
ACTTCATCGCCATGCAGGACGGCGAGATCGCGGTCATCACCCCGACAGAG
TGCTCCCTCGACAAAACCCGCATGGAACAGGTGGGTCGTCGTGCCGTGTC
TTGTTGGATCTTGGAGTTTTTCGTCGTACCGGTAATGTTGCAGTTTTGTG
TGCATCGGCGCTGGGGCAAGCGCCGAGGGGGTCTGTTAGCCCCCGCAAGA
TCCCGCCCCCATGCTCTCTCGTGTGTCCGGGGTTAAGCGAAAGCCAACGA
CCAAAAGACGTATGTACCACATACAAACTGGAATTGAAATGTCTGGTACC
AGTAATTGCCATCACGTCACGTTCGTTGCCCACGATGAAGCTTGATTTTG
TTCGTTTGCCCACGCGTAATCTTTCAGGCTCCGGACCATGGTGTCGAAAC
TACCCCTGCTCCTCACGCGCACTGGACGCTGTACGAGGCTCTCCAGCAGC
CTATGGCCATCGCGAGGGCCTTGGCATTCGGAGGCGAGGCGAAGTTTTCC
AAATTAAGATGGACATGGACATGCTAGGCTGTGTAGGCAGCAGTAGTTGG
TGGCCAGAAAGGAACGCTTTCACACAGGCAGCAATGTCGTTTGCTGTGTT
TGCGTTGTCAAGCATGTTCGGCACCACGCCGTGCAGAAAGTGCAGAAAGT
GCAGAAAGTGCAGAAAGTGCAGAAAGTGCACGCTGTTATAGCGTTTTGTT
TCGTGTCGACCAAAAAAGACCGCACCGCACGCTACATACCGCGTGAACGC
AAAGCAGGCCGCATGACCGACGCCTCCGGAGTGGTGCTCGGCGGGCTTGA
TCGCAACGTGGACAAGCTGTCCAAGGTCCGCAATCTCATGTTCGCCGCGT
GCGGCACCAGCCTTTACGCCAGCCAGTACGGTGCGAAACTCATGCGGGAC
ATGGGAGCGGTGGACACT
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Coding sequence (CDS) from alignment at C-linearis_contig83:504612..505629-

>mRNA_C-linearis_contig83.16059.1 ID=mRNA_C-linearis_contig83.16059.1|Name=mRNA_C-linearis_contig83.16059.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=864bp|location=Sequence derived from alignment at C-linearis_contig83:504612..505629- (Chordaria linearis ClinC8C monoicous)
ATGGTGATCGGCCTCGGCACGGACCACATCTACGTGGCCTCCGAGACCGC
CGCGTTCAACCGGCACACCAAGAACTTCATCGCCATGCAGGACGGCGAGA
TCGCGGTCATCACCCCGACAGAGTGCTCCCTCGACAAAACCCGCATGGAA
CAGGTGGGTCGTCGTGCCATGGTGATCGGCCTCGGCACGGACCACATCTA
CGTGGCCTCCGAGACCGCCGCGTTCAACCGGCACACCAAGAACTTCATCG
CCATGCAGGACGGCGAGATCGCGGTCATCACCCCGACAGAGTGCTCCCTC
GACAAAACCCGCATGGAACAGGTGGGTCGTCGTGCCGCTCCGGACCATGG
TGTCGAAACTACCCCTGCTCCTCACGCGCACTGGACGCTGTACGAGGCTC
TCCAGCAGCCTATGGCCATCGCGAGGGCCTTGGCATTCGGAGGCGAGGCG
AAGCTCCGGACCATGGTGTCGAAACTACCCCTGCTCCTCACGCGCACTGG
ACGCTGTACGAGGCTCTCCAGCAGCCTATGGCCATCGCGAGGGCCTTGGC
ATTCGGAGGCGAGGCGAAGCAGCAATGTCGCAGCAATGTCTGGTGCTCGG
CGGGCTTGATCGCAACGTGGACAAGCTGTCCAAGGTCCGCAATCTCATGT
TCGCCGCGTGCGGCACCAGCCTTTACGCCAGCCAGTACGGTGCGAAACTC
ATGCGGGACATGGGAGCGGTGGACACTTGGTGCTCGGCGGGCTTGATCGC
AACGTGGACAAGCTGTCCAAGGTCCGCAATCTCATGTTCGCCGCGTGCGG
CACCAGCCTTTACGCCAGCCAGTACGGTGCGAAACTCATGCGGGACATGG
GAGCGGTGGACACT
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