mRNA_C-linearis_contig83.16058.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig83.16058.1
Unique NamemRNA_C-linearis_contig83.16058.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5K991_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K991_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 2.080e-141
Identity = 242/430 (56.28%), Postives = 300/430 (69.77%), Query Frame = 1
Query:   28 APKRSSNAHSSTRNPIINELDGLRDLLSDILQTPREGDTGGIAVNHPKLLAAKLRASKVADPILKRPLGSPTQTKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGGS-RETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAETQDQL--DRDESFCINLK----QAGDTLKKREADCALLRGTHFVPLASAQSAADAEKLAYNNCVAEE----KREAEAASKAR 1284
            A  R+SN +SST NP   +L   +D L  +L   R GDT GIAV  P+L  AKLRASKV DPIL  PL SP++T  EL +K +  DYFT ALLRG+ P DGC  GTPFITEGDG+C LNA+AQLF+ KK+RGIR DVK  AAKLRL +VLE LRH+E Y+S QEDFFM  SNY   VR+ L K+GW IEP+ +N +RV SR CARLM++AQL + A++RR+LQQFVFP+LATVI+ PLR FLP  SL+D YGA WDHTLF+PL + G  R  VHVV T+ SSAEYRP+F DA GWRA++   L ELNH+VSLSS+ AA  HA A+        +A +   +AQ A A  Q Q    ++E+    +K    +A D  KKRE   ALL G +FVPLASAQ+AA+A+K AY  CV EE    +R+A+AA+ +R
Sbjct:    3 ARSRTSNQYSSTGNPFYAKLSESKDALGAVLNN-RGGDTHGIAVEQPQLKTAKLRASKVTDPILSNPLTSPSKTSSELRDKDLCFDYFTEALLRGVPPVDGCGVGTPFITEGDGNCHLNAVAQLFVVKKVRGIRNDVKTFAAKLRLAIVLEGLRHIEAYVSVQEDFFMDGSNYGDEVRDELPKSGWKIEPDLDNKMRVGSRQCARLMFIAQLRHTAQNRRWLQQFVFPILATVIQTPLRVFLPSRSLSDAYGATWDHTLFRPLYSSGPPRPAVHVVSTIASSAEYRPNFEDAAGWRAQHMPHLPELNHWVSLSSENAATAHASAVAASAQLRQTAWQTRDDAQVALALAQAQQVPGQEETILAEVKTAFKEASDMCKKREDYHALLTGNYFVPLASAQAAAEADKEAYKKCVDEESDERRRKAKAAAASR 431          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5JQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH9_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 9.460e-103
Identity = 165/280 (58.93%), Postives = 201/280 (71.79%), Query Frame = 1
Query:  244 QTKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGGS-RETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAETQDQ 1080
            QT  EL++K + +DYFT  LLRG+ P DGC  GTP ITEGDG+C LNA+AQLF+ KK RGIR DVK  AAKLR+ +VLE LRH+E Y+S QE FFM WSNY   VR+ L K+GW IEP  +N +RV SR CARLM++AQL + A++RR+LQQFVF +LATVI+ PLR FLPY SL+D YGA WDHTLF+PL + G  R  VHVV T+ SSAEYR DF DA GWRA++     ELNH+VSLSS+ AA  HA A+        +A +   +AQ A A  Q Q
Sbjct:    4 QTSLELIDKDLCIDYFTETLLRGVPPVDGCGVGTPCITEGDGNCLLNAVAQLFVVKKARGIRNDVKTFAAKLRVTIVLEGLRHIEAYVSVQEGFFMDWSNYGDEVRDELPKSGWKIEPGLDNKMRVGSRQCARLMFIAQLRHTAQNRRWLQQFVFAILATVIQTPLRVFLPYRSLSDAYGATWDHTLFRPLYSSGPPRPAVHVVSTIASSAEYRTDFEDAAGWRAQHMPHQPELNHWVSLSSENAATAHASAVAASAQLRQTAWQTRDDAQVAVALAQAQ 283          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5JGK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGK0_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 3.970e-96
Identity = 187/408 (45.83%), Postives = 252/408 (61.76%), Query Frame = 1
Query:   67 NPIINELDGLRDLLSDILQTPREGDTGGIAVNHPKLLAAKLRASKVADPILKRPLGSPTQTKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGG-SRETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAETQDQLDRDESF---CINLK----QAGDTLKKREADCALLRGTHFVPLASAQSAADAEKLAYNNCVAEEKREAE 1266
            NP    L  LR LL  +++ PR GD  GIAV+HP +  AK RA +   P    PL SP+QT  ELLEKG    +FT+A+LRGI  EDG EAGTP++T+GDG+C LNA+A L ++K+ RG+R  VK +AA+LRL +V+E LR++E YL RQ +F+  W NY+  V   L + GW ++   EN  R+ SR CARL+++  L +IARD+ +LQQFV PMLATVIR P+R F+P+ S+ +  G  W  TLFQPL+     R+TVHVVMT  SSA+YRP FSDA  ++  NGG + ELNHFV+LS D  A  H  A+ R    +  AQ+  + ++A   E         S    C  L     +A + L++R+A    + GT+F PLASA      EK  +N    E +R AE
Sbjct:   12 NPQQAALGDLRSLLGAVVRKPR-GDAHGIAVDHPAVAEAKRRALQKGGPFDHFPLPSPSQTDRELLEKGAEPCHFTSAILRGINHEDGREAGTPYLTDGDGNCLLNAVAMLLVKKQPRGVRNAVKTMAAQLRLGIVVEGLRNIEVYLDRQYEFYGTWYNYVDQVVFDLKRCGWVVDAMPENRWRMASRDCARLVFLGCLHHIARDKVFLQQFVLPMLATVIRGPVRVFVPFISVQNVNGGEWQWTLFQPLVAPDPGRQTVHVVMTYVSSADYRPQFSDAHEYKRLNGGRIRELNHFVALSHDNTAKNHEAAVTRMAGLVRLAQDDCKESEARLKEAVGDSGGSPSAPHTCTELADAQGKAQEQLRRRQAAYRCITGTYFTPLASAAEVTALEKECFNKRQDEARRLAE 418          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5KEY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY1_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 9.990e-85
Identity = 155/339 (45.72%), Postives = 212/339 (62.54%), Query Frame = 1
Query:  247 TKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGG-SRETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAETQDQLDRDESF---CINLK----QAGDTLKKREADCALLRGTHFV--PLASAQSAADAEKLAYN 1233
            T  ELLEKG    +FT+A+LR I  EDG EAGTP++T+GDG+C LNA+A L ++K+ RG R  VK +AA+LRL +V+E LR++E YL RQ +F+  W NY+  V   L + GW ++   EN  R+ SR CARL+++  L +IARD+ +LQQFV PMLATVIR P+R F+P+ S+ +  G  W  TLFQPL+     R+TVHVVMT  SSA+YRP FSDA  ++  NGG + ELNHFV+LS D  A  H  A+ R    +  AQ+  + ++A   E         S    C  L     +A + L++R+A  + + GT+F   PLASA      EK  +N
Sbjct:    2 TDRELLEKGAEQCHFTSAILRSINHEDGREAGTPYLTDGDGNCLLNAVAMLLVKKQPRGDRNAVKTMAAQLRLGIVVEGLRNIEVYLDRQYEFYGTWYNYVDQVVFDLKRCGWVVDAMPENRWRMASRDCARLVFLGCLHHIARDKVFLQQFVLPMLATVIRGPVRVFVPFTSVQNVNGGEWQWTLFQPLVAPDPGRQTVHVVMTYVSSADYRPQFSDAHEYKRLNGGRIRELNHFVALSHDNTAKNHEAAVTRMAGVVRLAQDDCKESEARLKEAVGDSGGSPSAPHTCTELADAQGKAQEQLRRRQAAYSCITGTYFASTPLASAAEVTALEKECFN 340          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5JD20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD20_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 1.100e-79
Identity = 154/298 (51.68%), Postives = 198/298 (66.44%), Query Frame = 1
Query:  244 QTKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHS---LTD--FYGAPWDHTLFQPLIT------------GGSRETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAETQDQLD 1086
            QT++ELL+K +  DYFTAALLRG+Q  DG  AGTPFIT GDG+C LNA+AQLF  KK RG+  ++K LAAKLRL V LE +RHME YLS QEDF M WS Y + +RE L K GWTIE +A N  R+ SR C+RLM+VAQL ++A +  +LQQF FP+LA VI+ PLR F+P+ S   L D   Y  P  +   +  +             G +   VHVVMT+ SSA+YR +F+DA GWR ++GG+L ELNH VS S  TAAG HALA+  F +   +A+E+   AQ A A+ ++  D
Sbjct:    5 QTEKELLDKELSKDYFTAALLRGVQHVDGLGAGTPFITAGDGNCLLNAVAQLFA-KKTRGMGNEIKSLAAKLRLSVTLEGMRHMEAYLSCQEDFSMCWSIYGNELREGLPKLGWTIEADAHNKHRLGSRNCSRLMFVAQLKHVAGNCNWLQQFAFPLLAIVIQVPLRGFVPWLSRLLLPDGPLYCRPQPYAHIRSFVDTHPVPTVFTVRPGRTHPAVHVVMTIMSSADYRSNFNDAPGWRDRSGGVLPELNHLVSFSG-TAAGAHALAVAAFADMGTAARESLEKAQTAVAQAEEAPD 300          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: D7FWX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX9_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 5.110e-78
Identity = 148/311 (47.59%), Postives = 189/311 (60.77%), Query Frame = 1
Query:  106 LSDILQTPREGDTGGIAVNHPKLLAAKLRASKVADPILKRPLGSPTQTKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGGSRETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEA 1038
            + D +  P   DT GI V   +L       SK  DPI    L   +QT +ELL KG+F D FTAALL GI+PEDG   GTPF +E +G C LN++A  F ++  RG+R  VK +A KLRL VVL  L++ME +L  Q+D F  W NY S VRE L K GW + P+ +N+  V S  CA LM++AQL  IA+   +L QFVFP+LATV++ PLR FLP ++L +  G PW HTLF P    G R T+HV MTMG S+ Y P F +A G+       L ELNHFV++S DTA     LAL +F      A+EA
Sbjct:    1 MLDFVLHPSSPDTSGIPVEDERLQKVTEWVSKQEDPIDGELLPDASQTAKELLTKGLFKDKFTAALLNGIEPEDGGGVGTPFESESNGDCLLNSVAAFFAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMEIFLLEQDDHFGAWYNYTSDVRERLEKNGWHVVPDVDNNWHVGSSNCAWLMFLAQLRSIAKPGAWLHQFVFPILATVVQSPLRLFLPLNTLNNAQGGPWKHTLFLPAWETGRRPTLHVAMTMGYSSSYLPPFDNATGYLEYVENQLPELNHFVTVSGDTAIVAKDLALTKFRTLKSKAKEA 311          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5KDU2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU2_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 8.500e-70
Identity = 140/267 (52.43%), Postives = 172/267 (64.42%), Query Frame = 1
Query:   25 MAPKRSSNAHSSTRNPIINELDGLRDLLSDILQTPREGDTGGIAVNHPKLLAAKLRASKVADPILKRPLGSPTQ-----------------------TKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLP 756
            M  +R+SN +SST  P+   L  +++ L  IL   R G+T GIAV++P+L  A  +ASK+ DPIL  PL SP+Q                       TK+ELL+K +   YFTAALLRG+QP  G  AGTPFIT GDG+C LN +AQLF  KK RG+R ++K LA KLRL V LE +RHME YLS QEDFFM WSNY   VRE L K GWTIE +A N  RV SR CARLM+V QL ++     +LQQF FP+LATVI+ P R F+P
Sbjct:    1 MPARRNSNPYSSTGKPVYEALSDVQEDLRLILYDVR-GNTHGIAVDNPRLQEALRKASKLHDPILSNPLPSPSQDFLLPGTNGFHVNANSFPIRLAQTKKELLDKELSKGYFTAALLRGVQPVGGLGAGTPFITAGDGNCLLNTVAQLFA-KKTRGMRNEIKSLAVKLRLSVTLEQMRHMEAYLSCQEDFFMCWSNYGDEVREGLPKLGWTIEADAHNKHRVGSRNCARLMFVTQLKHLPGYCNWLQQFAFPLLATVIQAPFRGFVP 265          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5LD96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD96_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 5.440e-68
Identity = 136/335 (40.60%), Postives = 185/335 (55.22%), Query Frame = 1
Query:   67 NPIINELDGLRDLLSDILQTPREGDTGGIAVNHPKLLAAKLRASKVADPILKRPLGSPTQTKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGG-SRETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAE 1068
            NP    L  LR LL  +++ PR GD  GIAV+HP +  AK RA +   P    PL SP+QT  ELLEKG    +FT+A+LRGI  EDG EAGTP++T+GDG+C LNA+A L ++K+ RG+R  VK +AA+LRL +V+E LR++E YL R+ +F+  W NY+  +   L + GW ++   EN  R+ S                                             S+ +  G  W  TLFQPL+     R+TVHVVMT  SSA+YRP FSDA  ++  NGG + ELNHFV+LS D  A  H  A+ R    +  AQ+  + ++A   E
Sbjct:   12 NPQQAALGDLRSLLGAVVRKPR-GDAHGIAVDHPAVAEAKRRALQKGGPFDHFPLPSPSQTDRELLEKGAEQCHFTSAILRGINHEDGREAGTPYLTDGDGNCLLNAVAMLLVKKQPRGVRNAVKTMAAQLRLGIVVEGLRNIEVYLDRKYEFYGTWYNYVDQLVFDLKRCGWVVDAMPENRWRMASLT-------------------------------------------SVQNVNGGEWQWTLFQPLVAPDPGRQTVHVVMTYVSSADYRPQFSDAHEYKRLNGGRIRELNHFVALSHDNTAKYHETAVTRMAGLVRLAQDDCKESEARLKE 302          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5K9T1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9T1_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.060e-61
Identity = 141/362 (38.95%), Postives = 199/362 (54.97%), Query Frame = 1
Query:  112 DILQTPREGDTGGIAVNHPKLLAAKLRASKVADPILKRPLGSPTQTKEELLEK------GIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGGSRETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAETQDQL----------DRDESFCINLKQAGDTLKKREA 1149
            D +  P   DT GI V   +L       SK  DP+    L   ++   EL ++      G+F   FTAALL G++PEDG   GTPF +EG+G C LN++A    ++  RG+R  VK +A KLRL VVL  L++ME +L  Q+  F  W NY + VRE L K GW +    +N+  V S  CARLM++AQL   A+   +LQQF FP+LATV++ PLR FLP+++ T+  G  W H +FQP      R T+HV MT G S+ Y P F +A G+       L ELNHFV++S DTA      A+++F      A+EA +   A+  + QD +          D +E     L  A ++++K +A
Sbjct:   17 DFVLHPSSPDTSGIPVEDERLQKVTECVSKQDDPVDGELLPDASKVHGELTDRKGAPGEGLFKGKFTAALLNGVKPEDGGGVGTPFESEGNGDCLLNSVAAFLAKEGGRGVRSAVKTMAVKLRLSVVLYGLKYMELFLLEQDYHFGAWYNYTTDVRERLEKNGWHVV-HVDNNWHVGSSNCARLMFLAQLRSKAKPGAWLQQFAFPILATVVQSPLRVFLPFNAFTNAQGGSWKH-IFQPAWETARRSTLHVAMTTGYSSSYHPPFDNATGYLEYVENQLPELNHFVTVSDDTAIVAKDRAVRKFRMLKSQAKEAVK---ASKRQVQDAMLGPELNELTADEEEDVHRRLTDAKNSVRKADA 373          
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Match: A0A6H5JY21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY21_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 1.370e-61
Identity = 121/269 (44.98%), Postives = 161/269 (59.85%), Query Frame = 1
Query:  238 PTQTKEELLEKGIFVDYFTAALLRGIQPEDGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVVLEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVVSRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTDFYGAPWDHTLFQPLITGGSRETVHVVMTMGSSAEYRPDFSDAEGWRAKNGGILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYR 1044
            P QT +EL  KG+F D FTAALL G++PEDG   GTPF +EG+G C LN++A  F ++  RG+R  V+ +A KLRL V               +D F  W NY S VRE L K  W + P+ +N+  V S  CARLM++AQL  IA+ R +LQQFV P+LATV+  PLR FLP+++  +  G PW HT F P      R T+HV MTMG ++ Y P F +A G+       L ELNHFV++S DTA      A+++F      A+EA +
Sbjct:   60 PVQTAKELQAKGLFKDKFTAALLNGVEPEDGGGVGTPFGSEGNGDCLLNSVAAFFAKEGGRGVRSAVQTMAVKLRLSV---------------DDHFGAWYNYTSDVRERLEKNEWHVVPDVDNNWHVGSSNCARLMFLAQLRSIAKPRAWLQQFVVPILATVVHSPLRVFLPFNTFNNAQGGPWKHTHFLPAWETARRSTLHVAMTMGYNSSYHPPFDNATGYLEYVENQLPELNHFVTVSDDTAIVAKDRAVRKFRMLKSQAKEAVK 313          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16058.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K991_9PHAE2.080e-14156.28Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQH9_9PHAE9.460e-10358.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGK0_9PHAE3.970e-9645.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEY1_9PHAE9.990e-8545.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD20_9PHAE1.100e-7951.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWX9_ECTSI5.110e-7847.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDU2_9PHAE8.500e-7052.43Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5LD96_9PHAE5.440e-6840.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9T1_9PHAE1.060e-6138.95SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JY21_9PHAE1.370e-6144.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:467552..470974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1291
Cds size1266
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930624.357259-CDS-C-linearis_contig83:467551..4675991622930624.357259-CDS-C-linearis_contig83:467551..467599Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 467552..467599 -
1690881165.3341153-CDS-C-linearis_contig83:467551..4675991690881165.3341153-CDS-C-linearis_contig83:467551..467599Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 467552..467599 -
1622930624.3711689-CDS-C-linearis_contig83:467793..4678561622930624.3711689-CDS-C-linearis_contig83:467793..467856Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 467794..467856 -
1690881165.3487475-CDS-C-linearis_contig83:467793..4678561690881165.3487475-CDS-C-linearis_contig83:467793..467856Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 467794..467856 -
1622930624.3838384-CDS-C-linearis_contig83:468127..4681871622930624.3838384-CDS-C-linearis_contig83:468127..468187Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 468128..468187 -
1690881165.3585823-CDS-C-linearis_contig83:468127..4681871690881165.3585823-CDS-C-linearis_contig83:468127..468187Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 468128..468187 -
1622930624.3950312-CDS-C-linearis_contig83:468398..4687601622930624.3950312-CDS-C-linearis_contig83:468398..468760Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 468399..468760 -
1690881165.368022-CDS-C-linearis_contig83:468398..4687601690881165.368022-CDS-C-linearis_contig83:468398..468760Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 468399..468760 -
1622930624.4062214-CDS-C-linearis_contig83:469138..4696491622930624.4062214-CDS-C-linearis_contig83:469138..469649Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 469139..469649 -
1690881165.3789444-CDS-C-linearis_contig83:469138..4696491690881165.3789444-CDS-C-linearis_contig83:469138..469649Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 469139..469649 -
1622930624.4183428-CDS-C-linearis_contig83:470728..4709501622930624.4183428-CDS-C-linearis_contig83:470728..470950Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 470729..470950 -
1690881165.391549-CDS-C-linearis_contig83:470728..4709501690881165.391549-CDS-C-linearis_contig83:470728..470950Chordaria linearis ClinC8C monoicousCDSC-linearis_contig83 470729..470950 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930624.4306479-UTR-C-linearis_contig83:470950..4709741622930624.4306479-UTR-C-linearis_contig83:470950..470974Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 470951..470974 -
1690881165.4016435-UTR-C-linearis_contig83:470950..4709741690881165.4016435-UTR-C-linearis_contig83:470950..470974Chordaria linearis ClinC8C monoicousUTRC-linearis_contig83 470951..470974 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16058.1prot_C-linearis_contig83.16058.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig83 467552..470950 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig83.16058.1

>prot_C-linearis_contig83.16058.1 ID=prot_C-linearis_contig83.16058.1|Name=mRNA_C-linearis_contig83.16058.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=422bp
MAPKRSSNAHSSTRNPIINELDGLRDLLSDILQTPREGDTGGIAVNHPKL
LAAKLRASKVADPILKRPLGSPTQTKEELLEKGIFVDYFTAALLRGIQPE
DGCEAGTPFITEGDGSCQLNAIAQLFLEKKLRGIRKDVKDLAAKLRLCVV
LEALRHMETYLSRQEDFFMLWSNYLSHVRESLTKAGWTIEPEAENSIRVV
SRPCARLMYVAQLAYIARDRRYLQQFVFPMLATVIRPPLRAFLPYHSLTD
FYGAPWDHTLFQPLITGGSRETVHVVMTMGSSAEYRPDFSDAEGWRAKNG
GILLELNHFVSLSSDTAAGVHALALQRFENNLHSAQEAYRNAQAATAETQ
DQLDRDESFCINLKQAGDTLKKREADCALLRGTHFVPLASAQSAADAEKL
AYNNCVAEEKREAEAASKARSG
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mRNA from alignment at C-linearis_contig83:467552..470974-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig83.16058.1 ID=mRNA_C-linearis_contig83.16058.1|Name=mRNA_C-linearis_contig83.16058.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3423bp|location=Sequence derived from alignment at C-linearis_contig83:467552..470974- (Chordaria linearis ClinC8C monoicous)
CGGGCAAATGAAAGCCCGGCGACAATGGCGCCAAAGAGGAGTAGCAACGC ACATTCGTCGACGAGGAACCCCATCATCAATGAACTGGATGGTTTGAGGG ACCTCCTCTCAGACATCCTGCAGACACCGCGAGAAGGGGACACAGGCGGC ATCGCAGTTAATCACCCCAAACTTCTGGCAGCGAAACTTCGGGCTTCGAA GGTTGCTGATCCGATCCTCAAACGTCCCCTTGGCTCACCGACCCAGGTAT GGTTCTCGGATCGATCGCGCACGTTTGGCCATGTGACCGATGTGATTACC AGGCGAATTATGAACTACAGAATTTGCGGAATTTGCTTCGAATTTCAAGT TTCGAATTGTTTTGGTTCTGTTTTGTTCTCGTTCTCGGAGTCTTTTGGTT CGCGTTGGTTCCACTACTGTAGTACATACATATGTACCTGCCGTATTGAC ACGAGATGAAACCACTCGGGGTCAAATTCTGTAATCTGAGGTGGCTACTG AAGCGTCCAAAAGAAGTATCAGCCAATTTTTTGCAGGTGTTGTAACAGCG CTTCGGGTTGCTACCTTGTTGTTCGTGATTGTGAAACCACTGCTTGATAA GCTGAGAGTACTACAGCAGTACAGAGTTCAAATTTCAAATTCCGTATGTA TGTACGAACGATGTACGAATGTACGAAGCATGTACAATTGCTTATCCTTG TCGTAAAAAATGTACTCCGTCTGGTTGTCTGTTGAGACAGTCCTCACCAC TCACAGCTAGATTTTGTGTAGTTGTGGACAATGTTGTGGGAACTACAGCG TAGTTCGAAGTCAAACTACATGTAGGCAGGCAAGTCGCTTCGCCAACGCG TTTGTCACCTTTATGATCCGAATCACACACACATCGACTCGCCGACACGC ATGAAAGTTCAGGTTGATCTGAGTCGCATCGGGGTCTGTGTCCAATGTTT TTTATGCTTGAGTCGTCGTCTTTCGTGCCTGCCTGCCTCATTGAGCGATA GCGGTTTGGGTCAGGTTCGGTAGCTTGGAATGGCCGTTGCACTTGGTCTT TTCCGCCGCTTTTAAATCGTGCATGTCGTCACTACATACGCCGACCTTGG GCTCCACTTGCATTACGCGGAATCATTTGGTAGGGATCTGCCCCCTCTCA TGACCTTACTGTAGTATGGGTGGAACTTGCTGTATGAAGGGTGCTGGGGT CAAATGTGCCAGGAGTCCAAGGTGCGGTGCTTTTCTCTGGCAGCATCACC CAAGGCCCAACCAAAAAACTGCCTCTGCTTCTGTGTTTTTTGCGGGTGAT TCTCGCTCCAAACCGTGCGGCGCAGACAAAGGAAGAGCTTCTCGAGAAAG GTATTTTCGTAGACTATTTCACAGCAGCCCTGTTGCGAGGGATACAGCCC GAAGATGGTTGTGAGGCCGGGACCCCCTTCATCACTGAGGGCGACGGCAG CTGCCAGCTGAACGCCATCGCCCAGCTATTCTTGGAGAAGAAATTACGTG GCATCAGGAAGGACGTGAAAGACTTGGCGGCGAAGCTACGGCTTTGTGTC GTGCTCGAGGCGCTGCGGCACATGGAGACATACCTCTCTCGGCAAGAAGA CTTCTTCATGCTTTGGTCCAACTACTTGTCTCACGTCCGCGAGAGCCTGA CCAAGGCGGGGTGGACCATCGAACCAGAAGCAGAAAACAGCATTCGCGTC GTGTCACGTCCGTGTGCGCGGCTCATGTATGTTGCGCAGCTTGCTTACAT CGCCAGGGATCGTCGCTATCTTCAGCAGTTTGTCTTCCCCATGCTCGCTA CTGTCATCCGGCCGCCTCTCCGTGCCTTCCTTCCATGTGAGTATCGCGCG ATCGATCAGTTCATGTTGCTGAGTACTCACCGCTTTTGCAACGTTTCGCC CAGAGGCATTTTGGGGGGGGGGGATAGGGGGGTTATTTGCAACTTTGCAA CTGCTGAGGCGTGCAGGACATTGGAGTTGTCCCACTTTGGTGTGTGCACG CCAGCTCGCTAAAATTTGCTGGTGTTCGTGCGAGCCTGAGGCGGTATTGT CGTAGTTGGAAGCGAGAGAGCGGGCGACATGCATCGGGGCAATTCCTTCC AGTCTCGTCGGTCGCACGCACCAAGGGGGGCGTGCATTCGTGTGGCGCCC TGCATGCAACGGCGCCAATCATCGTATTCTGCTTGGTTCGCGTGTACTGC CCAACATAACGCAGACCACAGCCTGACCGACTTCTACGGAGCCCCGTGGG ACCACACCTTGTTTCAACCGCTCATCACCGGTGGGTCTCGCGAGACAGTA CACGTGGTTATGACGATGGGTTCTTCGGCGGAGTACAGACCTGACTTCTC GGACGCAGAGGGTTGGCGTGCGAAGAACGGAGGTATACTGCTTGAGCTAA ACCACTTCGTGTCGTTGTCCTCTGACACTGCCGCCGGAGTCCACGCGTTA GCCCTTCAAAGGTTTGAGAACAACCTGCACAGTGCCCAAGAGGCGTACCG GAACGCCCAGGCCGCAACCGCTGAAACTCAAGATCAGCTGGACCGGGACG AGTCTTTTTGCATCAACTTGAAGCAGGTAACATGTGATTGACAGGTTAGA GCGTAGAGGCTTCTGTCGCCCGTCGGTTCTTTTGCGTGTATTGGAGGTAG CCAGTGTTGGGTGATTATAAGGCCCTGCCGATCTCGCTGCGCTGTTGTTG CGTGAGCGTTAGAGCGCTTTATCGGTGTTTTATCGCCGTTGTTCCGTTGT TTTATTGGCAGCCCCTTGTCCTTTCCCGTGTCTCCAGGCTGGCGACACGC TCAAGAAGCGTGAGGCAGACTGCGCACTTCTGAGAGGCACCCACTTCGTG AGTTTTGTCGTTGAGCGATAGATTCTGGCGATGTCGACTTATGTTTGTCC TCGCTTCTCTTGCGATGTTGACATTCGGTCTCACTTAGTTCCAGACTTGT TGGATCGCCTTGCGGGTGTTAGGTCTGACCTACGCTCGAATATGCGCTCA CGCTCGAATATGCGCTCGAGGGTGGTGTTCCTTTGTACTCAAGTATTTCA AAGTGTGTCTAGGAACTGGTTTTGGTCTACGATAAATTTAGCGTTATCGT TTCTTTGCCGTTAACCAGGTCCCGCTAGCTTCTGCCCAGTCCGCGGCCGA TGCCGAGAAACTCGCCTACAATAACTGCGTGGTGAGAACGTAGAAAGAGG GGCGTATGGTAATCCTACACTTGGTTTAGGAGTGTACGACTGGGCACTGA AGCCGCATATTCTTAGTTCTATATTTGTAGCAAATAATGTTGCCAACGTT GACATGCTCGTTGACGTCGGATTGCGCGAGTCCCACACGCAGTTGTGTCG GGTTTTCCCCCACGTTTGTATGCAGGCTGAAGAGAAGCGGGAGGCAGAGG CTGCATCGAAGGCACGGTCCGGA
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Coding sequence (CDS) from alignment at C-linearis_contig83:467552..470974-

>mRNA_C-linearis_contig83.16058.1 ID=mRNA_C-linearis_contig83.16058.1|Name=mRNA_C-linearis_contig83.16058.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2532bp|location=Sequence derived from alignment at C-linearis_contig83:467552..470974- (Chordaria linearis ClinC8C monoicous)
ATGGCGCCAAAGAGGAGTAGCAACGCACATTCGTCGACGAGGAACCCCAT
CATCAATGAACTGGATGGTTTGAGGGACCTCCTCTCAGACATCCTGCAGA
CACCGCGAGAAGGGGACACAGGCGGCATCGCAGTTAATCACCCCAAACTT
CTGGCAGCGAAACTTCGGGCTTCGAAGGTTGCTGATCCGATCCTCAAACG
TCCCCTTGGCTCACCGACCCAGATGGCGCCAAAGAGGAGTAGCAACGCAC
ATTCGTCGACGAGGAACCCCATCATCAATGAACTGGATGGTTTGAGGGAC
CTCCTCTCAGACATCCTGCAGACACCGCGAGAAGGGGACACAGGCGGCAT
CGCAGTTAATCACCCCAAACTTCTGGCAGCGAAACTTCGGGCTTCGAAGG
TTGCTGATCCGATCCTCAAACGTCCCCTTGGCTCACCGACCCAGACAAAG
GAAGAGCTTCTCGAGAAAGGTATTTTCGTAGACTATTTCACAGCAGCCCT
GTTGCGAGGGATACAGCCCGAAGATGGTTGTGAGGCCGGGACCCCCTTCA
TCACTGAGGGCGACGGCAGCTGCCAGCTGAACGCCATCGCCCAGCTATTC
TTGGAGAAGAAATTACGTGGCATCAGGAAGGACGTGAAAGACTTGGCGGC
GAAGCTACGGCTTTGTGTCGTGCTCGAGGCGCTGCGGCACATGGAGACAT
ACCTCTCTCGGCAAGAAGACTTCTTCATGCTTTGGTCCAACTACTTGTCT
CACGTCCGCGAGAGCCTGACCAAGGCGGGGTGGACCATCGAACCAGAAGC
AGAAAACAGCATTCGCGTCGTGTCACGTCCGTGTGCGCGGCTCATGTATG
TTGCGCAGCTTGCTTACATCGCCAGGGATCGTCGCTATCTTCAGCAGTTT
GTCTTCCCCATGCTCGCTACTGTCATCCGGCCGCCTCTCCGTGCCTTCCT
TCCATACAAAGGAAGAGCTTCTCGAGAAAGGTATTTTCGTAGACTATTTC
ACAGCAGCCCTGTTGCGAGGGATACAGCCCGAAGATGGTTGTGAGGCCGG
GACCCCCTTCATCACTGAGGGCGACGGCAGCTGCCAGCTGAACGCCATCG
CCCAGCTATTCTTGGAGAAGAAATTACGTGGCATCAGGAAGGACGTGAAA
GACTTGGCGGCGAAGCTACGGCTTTGTGTCGTGCTCGAGGCGCTGCGGCA
CATGGAGACATACCTCTCTCGGCAAGAAGACTTCTTCATGCTTTGGTCCA
ACTACTTGTCTCACGTCCGCGAGAGCCTGACCAAGGCGGGGTGGACCATC
GAACCAGAAGCAGAAAACAGCATTCGCGTCGTGTCACGTCCGTGTGCGCG
GCTCATGTATGTTGCGCAGCTTGCTTACATCGCCAGGGATCGTCGCTATC
TTCAGCAGTTTGTCTTCCCCATGCTCGCTACTGTCATCCGGCCGCCTCTC
CGTGCCTTCCTTCCATACCACAGCCTGACCGACTTCTACGGAGCCCCGTG
GGACCACACCTTGTTTCAACCGCTCATCACCGGTGGGTCTCGCGAGACAG
TACACGTGGTTATGACGATGGGTTCTTCGGCGGAGTACAGACCTGACTTC
TCGGACGCAGAGGGTTGGCGTGCGAAGAACGGAGGTATACTGCTTGAGCT
AAACCACTTCGTGTCGTTGTCCTCTGACACTGCCGCCGGAGTCCACGCGT
TAGCCCTTCAAAGGTTTGAGAACAACCTGCACAGTGCCCAAGAGGCGTAC
CGGAACGCCCAGGCCGCAACCGCTGAAACTCAAGATCAGCTGGACCGGGA
CGAGTCTTTTTGCATCAACTTGAAGCAGACCACAGCCTGACCGACTTCTA
CGGAGCCCCGTGGGACCACACCTTGTTTCAACCGCTCATCACCGGTGGGT
CTCGCGAGACAGTACACGTGGTTATGACGATGGGTTCTTCGGCGGAGTAC
AGACCTGACTTCTCGGACGCAGAGGGTTGGCGTGCGAAGAACGGAGGTAT
ACTGCTTGAGCTAAACCACTTCGTGTCGTTGTCCTCTGACACTGCCGCCG
GAGTCCACGCGTTAGCCCTTCAAAGGTTTGAGAACAACCTGCACAGTGCC
CAAGAGGCGTACCGGAACGCCCAGGCCGCAACCGCTGAAACTCAAGATCA
GCTGGACCGGGACGAGTCTTTTTGCATCAACTTGAAGCAGGCTGGCGACA
CGCTCAAGAAGCGTGAGGCAGACTGCGCACTTCTGAGAGGCACCCACTTC
GCTGGCGACACGCTCAAGAAGCGTGAGGCAGACTGCGCACTTCTGAGAGG
CACCCACTTCGTCCCGCTAGCTTCTGCCCAGTCCGCGGCCGATGCCGAGA
AACTCGCCTACAATAACTGCGTGGTCCCGCTAGCTTCTGCCCAGTCCGCG
GCCGATGCCGAGAAACTCGCCTACAATAACTGCGTGGCTGAAGAGAAGCG
GGAGGCAGAGGCTGCATCGAAGGCACGGTCCGGAGCTGAAGAGAAGCGGG
AGGCAGAGGCTGCATCGAAGGCACGGTCCGGA
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