mRNA_C-linearis_contig82.16034.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig82.16034.1
Unique NamemRNA_C-linearis_contig82.16034.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A835Z1X7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X7_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.850e-72
Identity = 143/336 (42.56%), Postives = 186/336 (55.36%), Query Frame = 3
Query:   30 MSGYDFGNRSQSEAWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVD--DGLPVRRWIGL-GTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPREST------------RTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
            M    F    Q + WA C+L S T+V SLY+VPAR+R L R +P QI AR  +V     V V+V  LLA+P    D      WIGL G E L  A+   L ++CCLFLGPL  +A MS K    +V  +G +RP         AA A+L  +   T+  Y+ +RNL+VGP+ EEVVFRGC + +LL AG SR  I   SPLLFG AH HH  E LR G         VL Q++YTSVFGA    + LRTGHL ++   H+LCNF+G+PD++F++ PG+    T            R +    + + +   YGVG+ LFF L  PLT      S LW
Sbjct:    1 MGPVTFPLAQQWQGWALCFLLSCTYVGSLYMVPARIRALRRDNPTQILARFGSVSAAAAVCVMVLKLLAKPSQSPDAADFHVWIGLPGGEGLVCAVACSLTLICCLFLGPLMCMALMSFKRRTQDVDVFGNARPAERRRSLLRAAAADLLTRSGATVQPYATLRNLLVGPVTEEVVFRGCFLPILLSAGASRGAITCASPLLFGLAHAHHIREGLRNGRGFLAAAVPVLVQLSYTSVFGALVALIHLRTGHLCATAACHILCNFMGLPDLSFNVPPGDYARPTYHLLLAINDSDGRCNGRRSNAQVIWASYGVGVILFFRLFYPLTETSAAASHLW 336          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: D7FJL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL4_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 1.550e-68
Identity = 109/137 (79.56%), Postives = 116/137 (84.67%), Query Frame = 3
Query:  600 KIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLWPTGASH 1010
            KI+WLSPLLFGFAHLHH LEWLRQG+ V  V  G+LFQ+ YTSVFGAFA FVQLRTGHLVSSILVHMLCNF+GVPDITFSIAPGNP ESTRTSVLY+HRK L C Y VGI LF  L+RPLTSP LYGSVLW  G  H
Sbjct:    2 KIVWLSPLLFGFAHLHHVLEWLRQGNSVRAVAVGMLFQIAYTSVFGAFAAFVQLRTGHLVSSILVHMLCNFMGVPDITFSIAPGNPGESTRTSVLYKHRKRLWCCYVVGIFLFGGLIRPLTSPGLYGSVLWSQGVLH 138          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A2D4BGL3_PYTIN (Prenyl protein protease n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGL3_PYTIN)

HSP 1 Score: 171 bits (433), Expect = 9.810e-46
Identity = 110/297 (37.04%), Postives = 155/297 (52.19%), Query Frame = 3
Query:  102 FVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
            +V  LY +P  +RRLPR  P  I AR   V     +   V  +  +  +  +    W+G+  + L AA+++PL V   LF G L     +++ L +       ISR       W     + L    ++T     ++RN ++GP+ EE VFR C V +L+ A  S  +II  SPL FG AHLHH +E L+ G  +      V FQ+ YTS+FGA+A F+ LRTGH VS  L+H+ CN +G+PD++F     NP  S     L+  R  +   Y +GI LF  LL PLT P LY S LW
Sbjct:   21 YVGVLYTLPRSIRRLPRDHPTHILARFLLVCIFCALCPFVLAMFYEYDEASISFAEWLGIRYQGLLAAIVIPLAVTALLFAGSL-----IANALRFVS-----ISRQFHQDGAWLALKNSTLYY--SITHDKLPSLRNFILGPLTEEFVFRSCMVPLLICAEFSAKQIIIGSPLTFGVAHLHHFIEHLKSGRSIKDASLIVGFQLIYTSLFGAYATFIYLRTGHFVSIFLIHVFCNVMGLPDLSFF----NPESS-----LHSFRIVILASYAIGIYLFSQLLVPLTEPALYESELW 296          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A8K1FR09_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR09_PYTOL)

HSP 1 Score: 170 bits (431), Expect = 3.750e-45
Identity = 110/304 (36.18%), Postives = 159/304 (52.30%), Query Frame = 3
Query:   81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
            C   +  +V  LY +P  +RRLPR  P  I AR   +     +   V  +  +  +D +    W+G+  E L  AL++PL+V   LF G L  +A +   ++        +S+   H   W     + L    ++T     ++RN ++GP+ EE VFR C V +L+ A  S  +II  SPL FG AHLHH +E L+ G  +   +  V FQ+ YTS+FGA+A FV LRTGH +S  L+H+ CN +G PD++F  +P    EST    L+  R  +   Y  GI  F  LL PLT P +Y S LW
Sbjct:   40 CLCMAAAYVGVLYTLPWSIRRLPRDHPTHILARFLLICIFCALCPFVLAMFYEYDEDSISFAEWLGIRVEGLLPALIIPLVVTAVLFAGSL--VASILRLVS--------VSKQFQHGGMWLALKNSALYY--SITHDKLPSLRNYILGPLTEEFVFRSCMVPLLICADFSAKQIILGSPLTFGVAHLHHFVEHLKSGRSIKEALLIVGFQLMYTSLFGAYATFVYLRTGHFISIFLIHIFCNVMGFPDLSF-FSP----EST----LHPFRAVILGTYFAGIYFFSVLLMPLTEPSIYESELW 322          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: K3WRZ9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRZ9_GLOUD)

HSP 1 Score: 165 bits (418), Expect = 1.580e-43
Identity = 109/304 (35.86%), Postives = 153/304 (50.33%), Query Frame = 3
Query:   81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
            C   +  +V  LY +P  +RRLPR  P  I AR   +     +   V  +     +  +    W+G+  E L  A++LPLL+   LFLG L     +++ L    V+    S        W     + L    ++T     ++RN ++GP+ EE VFR C + +L+ A  S  +I+W SPL FG AHLHH +E LR G          LFQ+ YTS+FGA+A F+ LRTGH VS  +VH+ CN +G PDI+F     NP  S     L+  R  +   Y VGI  F  +L P T P +Y S LW
Sbjct:   14 CLGMAAAYVGVLYTLPRSIRRLPRDHPTHILARFLLICIFCALCPFVLAVFYDHDESRISFAAWLGIRYEGLLPAVVLPLLITAMLFLGSL-----LANALRLLNVSKQFHSNGL-----WFAIKNSALYY--SVTRDQLPSLRNYILGPLTEEFVFRSCMIPLLVCADFSVKQIVWGSPLTFGVAHLHHFVEHLRNGRSPKDAALIALFQLLYTSLFGAYASFMYLRTGHFVSIFVVHVFCNIMGFPDISFF----NPENS-----LHPFRIMILGAYFVGIYGFTRVLGPWTDPAIYSSELW 296          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A024FZZ9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZZ9_9STRA)

HSP 1 Score: 164 bits (415), Expect = 9.110e-43
Identity = 107/306 (34.97%), Postives = 154/306 (50.33%), Query Frame = 3
Query:   81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLWPT 998
            C   +  +V  LY +P  +R+LPR  P  I  RL  +L    +   V    +Q  D  L    W+G+ ++ L  AL++P+++   LF G L     +S+ L    V+       R +P      A    +    +T     A+RN +VGPI EE VFR C + +L+ +  S  +II  SPL FG AHLHH +E LR G  +      V FQ+ YT++FGA+A F+ +RTGHL+   LVHM CN +G PD+TF   P +   S R  +L  +  G+   YG    +  W     T P +Y S LW T
Sbjct:   39 CLCMAAAYVGVLYALPKNIRQLPRDHPTHIIGRLFLILILCTLCPFVLAAFSQQDDRSLSFAEWLGIRSDGLLKALIIPVVITAVLFTGSL-----LSNGLRILNVS-------RQYPSNRLCNAVRNSSFVYAMTRERLPALRNYIVGPITEEFVFRSCMIPLLICSDFSHKQIILASPLTFGIAHLHHFIEHLRGGRSLWDAALIVGFQLLYTTLFGAYATFIYMRTGHLIGVFLVHMFCNIMGFPDVTF-FNPDHSLHSFRIILLGAYLLGI---YGFSRIVISW-----TEPDIYVSRLWNT 323          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A0P1B321_PLAHL (Caax prenyl protease 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B321_PLAHL)

HSP 1 Score: 163 bits (412), Expect = 1.290e-42
Identity = 108/312 (34.62%), Postives = 162/312 (51.92%), Query Frame = 3
Query:   81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPT---VVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLWPTGAS 1007
            C L +  +V  LY +P  +RRLPR  P  I AR   +         V  +     D  +   +W+G+  E L  A+ +PL V   LF G L     +++ +    V+       + H   + +A +  +    ++T     ++R  V+GP+ EE VFR C + +L+ A  +  +I+  SPL+FG AHLHH +E++R G  +     +VAG  FQ+ YTS+FGA+A F+ LRTGH  S  LVH+ CN +G PD+ F  +PGNP    R  +L       G ++ +GI  F  +L PLT P +Y S LW   AS
Sbjct:   14 CSLIAAAYVGVLYTLPHAIRRLPRDHPTHILARFLLICIFCAFCPFVLAVFYDHDDASMSFAQWLGIRREGLTQAIFMPLFVTSVLFTGSL-----LANAMRMINVS------RQFHSNGFWLAIKNSVLYY-SITHDRLPSLRTYVLGPLTEEFVFRSCMIPLLVCAKFTIKQIVVGSPLIFGAAHLHHFMEYVRHGRSLKDAALIVAG--FQLVYTSLFGAYATFIFLRTGHFASIYLVHVFCNVMGFPDLAF-FSPGNPLHPFRIVLL-------GAYF-LGIYGFSLILMPLTEPMIYSSELWNITAS 302          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A3R7JWH5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A3R7JWH5_9STRA)

HSP 1 Score: 162 bits (409), Expect = 3.410e-42
Identity = 108/304 (35.53%), Postives = 152/304 (50.00%), Query Frame = 3
Query:   81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
            C   +  +V  LY +P  +RRLPR  P  I AR   +     +   V  +     +  +   +W+G+  E L  A+++PLL    LF G L     + + L    V+    S        W     + L    ++T     ++R  V+GP+ EE VFR C V +L+ A  +  +I+  SPL+FG AHLHH +E++R G         V FQ+ YTS+FGA+A FV LRTGH VS  LVHM CN +G PD+TF     NP        L+ +R  L   Y +GI  F  LL PLT P +Y S +W
Sbjct:   14 CSCMAAAYVGVLYTLPHAIRRLPRDHPTHILARFLLICIFCALCPFVLAVFYDHDEASMSFAQWLGIRWEGLVQAIVVPLLATAVLFTGSL-----LGNALRLLNVSKQFHSNGM-----WFAIKNSALYY--SITHDRLPSLRTYVLGPLTEEFVFRSCMVPLLVCAEFTVKQIVLGSPLMFGAAHLHHFMEYVRHGRSPKDAALTVGFQLIYTSLFGAYATFVFLRTGHFVSIFLVHMFCNVMGFPDLTFF----NPENG-----LHPYRIVLLGAYLIGIYGFSRLLMPLTEPAIYSSEMW 296          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A8B7YBK9_ACAPL (Farnesylated proteins-converting enzyme 2 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YBK9_ACAPL)

HSP 1 Score: 153 bits (387), Expect = 3.260e-39
Identity = 112/327 (34.25%), Postives = 169/327 (51.68%), Query Frame = 3
Query:   21 APGMSGYDFGNRSQSEAWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKAR-LAAVLCTTGVTVLVTCLLAQPVD-DGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVV-AGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
            +PG     F   S  +A   C L +IT+V SLY+    L   PR DP+ IK R L+A + T    V +     Q  D  G  + + +G+    L  +L +PLL+   LFLGPL  +     +    +++P  +       LP    AR++         G   A+RN +VGP+ EE+VFR C + +L+   +   + +++ PL FG AH+HH +E LRQG   P V+  G +FQ  YT+VFGA + F+ LRTGH+++ I+VH+ CNF+G P   F   P +             R  +   + VG+ LF +LL PLTSP  Y + ++
Sbjct:    4 SPGKDQLIFQCGSSMKAVLTCLLLAITYVGSLYIWRTNL---PRDDPSTIKRRSLSAAIVTLLAPVCILTQAHQAKDVKGYTIWQHLGVRQAGLITSLSVPLLLTMVLFLGPLYMLLISDTR----QLSPVVL-------LPREWLARSK---------GMAIAVRNYIVGPVTEEIVFRACMLPLLVPC-LGNLRAVFVCPLFFGVAHVHHVIEGLRQGARRPFVIWVGAIFQFFYTTVFGALSAFLFLRTGHVIACIIVHIFCNFMGFP--AFDEIPNHTPLQ---------RAVICATFVVGLLLFLYLLLPLTSPERYANEMY 295          
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A7S2RW65_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW65_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.010e-38
Identity = 115/314 (36.62%), Postives = 157/314 (50.00%), Query Frame = 3
Query:   69 AWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKL-----AWYEVTPYGISR-PRVHPLPWHVAARAELANKGNLTLGAYSA---IRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWL-RQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYG 980
            AW  C   S  +VVSLYL+PAR++  PR DP  I AR AAV      ++                   +G     L  A+ +PL V+  L+ GP+A +  M+  L      W   T Y +S   R  PL    A    +A     TLG+ S+    RNLVVGP+ EE+VFR C + +L+ AGV    I++L+PL+F  AH HH LE   R G  V   +     Q  YT +FG  + F+ +RTGHL + I+ H++CNF+ +PD +F  AP    E    S LY  R  L   Y +GI  FFW +   T+   YG
Sbjct:   10 AWLACLGMSGLYVVSLYLLPARIKAKPRDDPGHIMARTAAVASVAAASLAWVIYTMSGTCGTSSALAMMGFRWATLGQAVGIPLGVISSLYAGPIAVLFSMALVLRTRHPVWLRATTYRLSYVDRPTPLSTSGALWESIA----YTLGSESSHVHFRNLVVGPLFEELVFRACMIPMLIFAGVRERTILFLAPLVFCTAHAHHILEKAPRIG--VARALQETAGQQIYTYIFGVLSGFIFMRTGHLSAPIIWHVICNFLQLPDPSFH-AP----EGQYLSPLYPSRWVLSLVYCLGIGAFFWSMAHWTTESAYG 312          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1X7_9STRA2.850e-7242.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FJL4_ECTSI1.550e-6879.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4BGL3_PYTIN9.810e-4637.04Prenyl protein protease n=1 Tax=Pythium insidiosum... [more]
A0A8K1FR09_PYTOL3.750e-4536.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WRZ9_GLOUD1.580e-4335.86Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024FZZ9_9STRA9.110e-4334.97Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A0P1B321_PLAHL1.290e-4234.62Caax prenyl protease 2 n=1 Tax=Plasmopara halstedi... [more]
A0A3R7JWH5_9STRA3.410e-4235.53Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A8B7YBK9_ACAPL3.260e-3934.25Farnesylated proteins-converting enzyme 2 n=2 Tax=... [more]
A0A7S2RW65_9STRA2.010e-3836.62Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:838432..843131 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.1
Seed ortholog evalue2.4e-56
Seed eggNOG ortholog2880.D7FJL4
Preferred nameRCE1
KEGG rclassRC00141
KEGG koko:K08658
KEGG ReactionR09845
KEGG Pathwayko00900,ko01130,map00900,map01130
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006508,GO:0006807,GO:0007323,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008237,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016021,GO:0016485,GO:0016787,GO:0019538,GO:0030176,GO:0031136,GO:0031137,GO:0031139,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046999,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051604,GO:0065007,GO:0070011,GO:0071432,GO:0071586,GO:0071704,GO:0080120,GO:0098827,GO:0140096,GO:1901564,GO:2000241,GO:2000243
EggNOG free text desc.CAAX prenyl protease
EggNOG OGsKOG4130@1,KOG4130@2759
Ec32 ortholog descriptionCAAX amino terminal protease
Ec32 orthologEc-04_006540.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons8
Model size1469
Cds size987
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16034.1prot_C-linearis_contig82.16034.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig82 838885..843102 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930619.1180985-UTR-C-linearis_contig82:838431..8388841622930619.1180985-UTR-C-linearis_contig82:838431..838884Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 838432..838884 -
1690881162.683097-UTR-C-linearis_contig82:838431..8388841690881162.683097-UTR-C-linearis_contig82:838431..838884Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 838432..838884 -
1622930619.2834873-UTR-C-linearis_contig82:843102..8431311622930619.2834873-UTR-C-linearis_contig82:843102..843131Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 843103..843131 -
1690881162.7978048-UTR-C-linearis_contig82:843102..8431311690881162.7978048-UTR-C-linearis_contig82:843102..843131Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 843103..843131 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930619.1318836-CDS-C-linearis_contig82:838884..8390001622930619.1318836-CDS-C-linearis_contig82:838884..839000Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 838885..839000 -
1690881162.7055037-CDS-C-linearis_contig82:838884..8390001690881162.7055037-CDS-C-linearis_contig82:838884..839000Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 838885..839000 -
1622930619.1492982-CDS-C-linearis_contig82:839706..8398381622930619.1492982-CDS-C-linearis_contig82:839706..839838Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 839707..839838 -
1690881162.7186427-CDS-C-linearis_contig82:839706..8398381690881162.7186427-CDS-C-linearis_contig82:839706..839838Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 839707..839838 -
1622930619.1655579-CDS-C-linearis_contig82:840383..8405151622930619.1655579-CDS-C-linearis_contig82:840383..840515Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 840384..840515 -
1690881162.730493-CDS-C-linearis_contig82:840383..8405151690881162.730493-CDS-C-linearis_contig82:840383..840515Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 840384..840515 -
1622930619.188395-CDS-C-linearis_contig82:840802..8409171622930619.188395-CDS-C-linearis_contig82:840802..840917Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 840803..840917 -
1690881162.745854-CDS-C-linearis_contig82:840802..8409171690881162.745854-CDS-C-linearis_contig82:840802..840917Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 840803..840917 -
1622930619.2086008-CDS-C-linearis_contig82:841360..8414861622930619.2086008-CDS-C-linearis_contig82:841360..841486Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 841361..841486 -
1690881162.756533-CDS-C-linearis_contig82:841360..8414861690881162.756533-CDS-C-linearis_contig82:841360..841486Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 841361..841486 -
1622930619.2279015-CDS-C-linearis_contig82:841707..8418601622930619.2279015-CDS-C-linearis_contig82:841707..841860Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 841708..841860 -
1690881162.7654088-CDS-C-linearis_contig82:841707..8418601690881162.7654088-CDS-C-linearis_contig82:841707..841860Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 841708..841860 -
1622930619.2475245-CDS-C-linearis_contig82:842460..8425351622930619.2475245-CDS-C-linearis_contig82:842460..842535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 842461..842535 -
1690881162.774149-CDS-C-linearis_contig82:842460..8425351690881162.774149-CDS-C-linearis_contig82:842460..842535Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 842461..842535 -
1622930619.263961-CDS-C-linearis_contig82:842964..8431021622930619.263961-CDS-C-linearis_contig82:842964..843102Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 842965..843102 -
1690881162.7845712-CDS-C-linearis_contig82:842964..8431021690881162.7845712-CDS-C-linearis_contig82:842964..843102Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 842965..843102 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig82.16034.1

>prot_C-linearis_contig82.16034.1 ID=prot_C-linearis_contig82.16034.1|Name=mRNA_C-linearis_contig82.16034.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=329bp
MSGYDFGNRSQSEAWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKAR
LAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVV
CCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKG
NLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLF
GFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLV
SSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGI
CLFFWLLRPLTSPRLYGSVLWPTGASHA*
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mRNA from alignment at C-linearis_contig82:838432..843131-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig82.16034.1 ID=mRNA_C-linearis_contig82.16034.1|Name=mRNA_C-linearis_contig82.16034.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4700bp|location=Sequence derived from alignment at C-linearis_contig82:838432..843131- (Chordaria linearis ClinC8C monoicous)
CGCACACTACTGACACACACGCGCCCGGGATGAGCGGCTACGACTTCGGC AACAGATCGCAGTCAGAAGCGTGGGCGTGGTGCTGGCTTGCGAGCATAAC CTTCGTGGTCAGCCTCTACCTTGTGCCAGCAAGGCTGAGGAGGTTGCCAA GGAGTGACCCCGCGCAGGTGATAGACCTAACTGCGCCAGGCTCTCCATAC TATCCGTAGGCTTTCGCCATGCTATTCAATTTTTCCAGTGCCCTGATGAA TGGACGTACACTTCCGCCCTTTCCTCTCTGGTACCCGCTGCCTGGGCCTG AAATACCGCTGGATTCCAAACTCCAAAGCGCAGTTTCCCCACGGTGTGTT CAAAAACTGTTCCGGTAAAAACTCGACCAACTCTACACTAGTGTCTGTAT ACATATGTAATATGTACATCCGACATTGTCCGCGTTCGGTAGCGAATCTG GCAATTCAAAGGCCCCAGGAAGCGGCCCACTGTTGTTGGTTTGTGTGTCA TCTGTCTTCTGCTCGAAAGAAAATGTAACACAACTAACTGCTGTTGCTCG CTCCTGCGTGATGTACGTCTCTCCCACAAATCATCATGGCGAGCAGATCA AAGCAAGACTTGCGGCTGTGCTCTGCACGACTGGCGTGACTGTGTTGGTG ACGTGTCTCTTGGCTCAACCGGTGAGCGCCCTGCCATTCACCACCTGCGA GAGATGTATGGATACCGTTTGTCAGTGTAAAGGTTACACCTGAAACAGAC ATACCTTTCTTTCTTGAGGTGGTCCCCGATCCCCTTCGCCTCTTGATGGT AGTACCTGGTACTCCACAGCAGACGCATTTGCCCTTGCGCAATACACTAC GAGAGGATATATATTTGGGCTCCTCCTAACCGTTCCATGGCGGCACATGC ATCCACCGGGATATCTCCATGGCTCGGTAGTCCGTGTTGGCAGCCCCGAC TGCTGTGTGCAATCCTCTCCATCTCTTGGTCGCTGTTTACGTACCTGGTA CTTCGTATACCCCTTCCCTCAGGTTTTGATAGTGCCCATACCTCTCTCTC TCTCTCTCTCTCTTTGTCTCTGCCTCACACACACATCCGCACACACTACT TGCGAAAGCGACGTTGCGTTTTTTGCCCGTGTAGCGTCCTACGCCTGTTC GTTCGCCGGCCGGTTTGCGCGGTCGACACCAACTGAGAGTACTCGATCAC GTGCAAAGAGACGCTACTACTGCTGTCTCGCATTTGAACGCGTAAAACCC CTCTCCAAACCGACGAGCCAGGTAGATGACGGGCTGCCGGTGCGAAGGTG GATCGGCCTCGGAACGGAAAGGTTGTGGGCCGCGCTGCTGCTACCGCTGT TGGTGGTGTGCTGCCTCTTCCTGGGACCGCTGGCAACGATAGCTTGCATG TCCCACAAGCTGGCTTGGTATGAGGTACGGCAGTCACATCTGCGCTTGCG CTCGTCACGCGTAGGGGGGAGGGGTAGGTGTGTAACTAGAGGGGCCGCCA ATCGAGCTTACCTGTGCTCTCAGCTTAGGCAATGTGAGAGCGGGTTTCAG GTCGACTTGAGGCGCCATTGGGTTGTACCGCTGTTTTTCTTTGACGAGAT GCGAAGTAGACACCAACCCCCCATGCGAAACTCGCATTTTGTCAGGTGAC GCCGTACGGCATATCCCGGCCCCGGGTGCACCCGCTGCCATGGCACGTGG CGGCAAGGGCGGAGCTGGCAAACAAAGGCAACCTCACGTTAGGGGCGTAC AGCGCGATACGGAATTTGGTGGTGAGCCCGTGCCGCCGCGCGTGCCTCTG GTTCGACTTGCCGCCGTTAACCCCCTTTCGGCCGAAAGTAGTCGTTCGGA AGCCATGTGATGGCGGTGTGGTGTTTACGTGCCATGTTGGATGCCTTGGG AGCAGCAGCAGCAGCGGCAGCGGCAGCAGCAGCCAGACTAGCCCTGGAAC GTCGGTCAAAAAGCGCATTTTCATACCCTCCCGAGCACACATGGTTGTAG CCAAGTTGGGCGCATGAACGCATGAGCTTGTAGCCACAACGTCCTGGCAT GTGGCGACGCCCGGCCGCTGAAATGGCGACTGACCAACCAACGTAGAAGC CGTTCACCATGACAGCATTGTCCCCCGAAACCCTCACCCCCGCCCCTTCC TTTTTCTTCGCTTGCACGGGTTAATAACGCTCGTTGGGCCTGTGCGTTAC ATTTGCTTTTCTAGGTGGGACCTATCGCAGAGGAAGTTGTATTTCGGGGG TGCACCGTGGCAGTGCTTCTGGGGGCGGGAGTATCGCGAACGAAGATCAT ATGGCTTAGTCCGCTTCTGTTCGGTTTTGGTGAGTTGGTTTGGGTGTTGG TGGAGATCGCTCGCGTGCGGCTCTTGTTTTTGTTGTTAGACGATGAAGGA GCAGAGAGCACGAAGGTGGCGAAAATGTGGCCTCATTTTCAATGACCGGC ATCGTGTACAGAAGTATCGTTGGCCTCGCAGGGTGCCCTCGCGCGTGCCT GCAAGCTTGTTCGAGGCACCTGGCAATTTTTTCACATGAACCTGCTTGTA CTGACTGCATATCTCTCTCCCCTGTCCGTCTCTTGCTCTCTCGTGAACGA CTCGTTGCAACCACAGCCCACCTGCACCACGCGCTGGAGTGGCTGCGGCA AGGACACCCCGTGCCAACCGTGGTGGCTGGCGTGCTGTTCCAGGTCACGT ATACCTCAGTCTTCGGAGCGTTCGCAGTGTTCGTGCAGCTACGAACAGGT GTGTTTGGTTGGTTTGCCGGATATTTCCACAAGCTTCATCGAGCGAAGTG AACCACCCAGTAAAAAAGTCCCCAAGTCCCCTTCCCTCCGGCTTTCTCTT GCCGACTAAAGTGTGAGTCTGCGGAGGGCGCTTGAGACGACCTATTTTGT GAAGAACAAGAAGGCCGCGAGTTGCAGAGCCTACCCACCATACAGAAGCA GTAGTAGCAGTAGCAACGACAGCAGTAGCTGTGCCACGGGCATGTTCATT GCAGTCGGGGGATAGTTTGTGGCATGCCTTTGTCGGCTGTTATCCCAGGC GGTGCCTTGGTCGGTATCTTGGATTGAAGCTACGTTGATGTATACCCCGT GTGTACTGCATTGCTGCTGAGCTTGTTGGGTACAGTAGTGTCTCCGCAAC TCCGCTGCTCTACCGTGGGTGACCTATAGTACCTCTCTTGCCCATGTGAG GACCGCAAACACGCCGCCTGTGCTTCCTTTCCTCTCTTTTGGTGCTGTGT CCCGTTCGGCCGGCGACTCTGGTTGGTCCTTTCGCGTCCGCAGGGCACCT GGTGTCGTCGATTTTGGTGCACATGTTGTGCAACTTCATTGGCGTGCCTG ACATCACCTTCAGCATTGCCCCCGGGAATCCCCGGGAGTCCACTCGCACT TCGGTTTTGTACGAGCACCGCAAAGGTGGGGAGAGAGGGTTGGGGGGTTT CACTAGAAGCTTCGACGCGTGATTGGCTGGCAGTCTGCACCATATCAGCC GTAGCACTATTTAGCTCCAGCAGTTGTGGACGTAGTGGTCAGGATTAAGG TTTCACAGAGCCAATGGGTATGTGGAATTTGCCCATGGTAGCCACCTAGA GGCAAGGTTATTGTGCAATGGCGCAGTGTCATACGAAGTACAAGGGAACC GAATGTTCCGTGGCATGGATATCTTACGGGGTGCATGATCTGTATGTTTG GTGATCAGTTGCGCACGAGCGGTGTTCAGCACCCCCTTTCACCGTCATAT GTCGTTACCGTATGATGCGTCCAACAGTCAACAGCTTTTCTCGCCCGTTG CGCCTGTCTGTAGTTCCCTTACCCATGCACTCGTCTACACTCAGCTGCGC GATAAAAAAAAAATCGTTTTCTACGTCACGAACCTACCTGTGACTCGGTA GACTCCCCCCAATTTTGATACATGTGCACGCCCGTTTGTTCAACTTGTTT CGGCGAGACTGGCCCTCGCGAGAGAGTTGGCATGTGTGAGGCATCACCTT TTATTGGCATCCCGTATTCTTGGTCATTGGGCACCAGCCGCGAGGAGGAG GAAGAGACTGAAACCCCGTCGCAACTTGTCCCTTTTTGTTTTTGTGTTTG TGGTTCGCGTCACCCCTTGCAATGAACGCAGGCCTCGGGTGCTTCTACGG GGTAGGCATATGTCTCTTTTTTTGGCTACTGCGCCCTTTGACGTCTCCTA GATTGTACGGCTCTGTGCTGTGGCCAACTGGGGCATCGCACGCGTGAAAA ATGGCGAGGGCGTGTAGCGGCTGTTGCTGCTACACTTTCTGTTTGTCTCG TTTCATGCGTTTTGTAACATTTTGGGGATGGGCTTGTGAACTCGTGGGGG TTTTACATAGAAAAACTCACAGGAGAACAAAGTGGAGGGTGCGTACTTCC ATCCAGGCTGCACTTCACCCGGGAGGTAGAGAGGATGGTACCACGGTCAA ATGTAACGCTTGTGGACCAACGGGGTTGAGAGAGGTGTTCCATGAGGGTT ACTGTAGTGCGCAAGTTTTGCCACGTGCTATTATAGTCGATGTTTCAATC TTGCATCATCATGACATGAATGACCGCGGAGTCTTAGTTGTTCGAAGCAT AGGGAAAGGGGTGAATCCTGAGGCGGGTGTGTGCGTATGCGGTGATGATA AACGATACAGCCGACAGATGCGCGCGACGACAACTTCAATGGAATTCCAC
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Coding sequence (CDS) from alignment at C-linearis_contig82:838432..843131-

>mRNA_C-linearis_contig82.16034.1 ID=mRNA_C-linearis_contig82.16034.1|Name=mRNA_C-linearis_contig82.16034.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at C-linearis_contig82:838432..843131- (Chordaria linearis ClinC8C monoicous)
ATGAGCGGCTACGACTTCGGCAACAGATCGCAGTCAGAAGCGTGGGCGTG
GTGCTGGCTTGCGAGCATAACCTTCGTGGTCAGCCTCTACCTTGTGCCAG
CAAGGCTGAGGAGGTTGCCAAGGAGTGACCCCGCGCAGATGAGCGGCTAC
GACTTCGGCAACAGATCGCAGTCAGAAGCGTGGGCGTGGTGCTGGCTTGC
GAGCATAACCTTCGTGGTCAGCCTCTACCTTGTGCCAGCAAGGCTGAGGA
GGTTGCCAAGGAGTGACCCCGCGCAGATCAAAGCAAGACTTGCGGCTGTG
CTCTGCACGACTGGCGTGACTGTGTTGGTGACGTGTCTCTTGGCTCAACC
GATCAAAGCAAGACTTGCGGCTGTGCTCTGCACGACTGGCGTGACTGTGT
TGGTGACGTGTCTCTTGGCTCAACCGGTAGATGACGGGCTGCCGGTGCGA
AGGTGGATCGGCCTCGGAACGGAAAGGTTGTGGGCCGCGCTGCTGCTACC
GCTGTTGGTGGTGTGCTGCCTCTTCCTGGGACCGCTGGCAACGATAGCTT
GCATGTCCCACAAGCTGGCTTGGTATGAGGTAGATGACGGGCTGCCGGTG
CGAAGGTGGATCGGCCTCGGAACGGAAAGGTTGTGGGCCGCGCTGCTGCT
ACCGCTGTTGGTGGTGTGCTGCCTCTTCCTGGGACCGCTGGCAACGATAG
CTTGCATGTCCCACAAGCTGGCTTGGTATGAGGTGACGCCGTACGGCATA
TCCCGGCCCCGGGTGCACCCGCTGCCATGGCACGTGGCGGCAAGGGCGGA
GCTGGCAAACAAAGGCAACCTCACGTTAGGGGCGTACAGCGCGATACGGA
ATTTGGTGGTGACGCCGTACGGCATATCCCGGCCCCGGGTGCACCCGCTG
CCATGGCACGTGGCGGCAAGGGCGGAGCTGGCAAACAAAGGCAACCTCAC
GTTAGGGGCGTACAGCGCGATACGGAATTTGGTGGTGGGACCTATCGCAG
AGGAAGTTGTATTTCGGGGGTGCACCGTGGCAGTGCTTCTGGGGGCGGGA
GTATCGCGAACGAAGATCATATGGCTTAGTCCGCTTCTGTTCGGTTTTGG
TGGGACCTATCGCAGAGGAAGTTGTATTTCGGGGGTGCACCGTGGCAGTG
CTTCTGGGGGCGGGAGTATCGCGAACGAAGATCATATGGCTTAGTCCGCT
TCTGTTCGGTTTTGCCCACCTGCACCACGCGCTGGAGTGGCTGCGGCAAG
GACACCCCGTGCCAACCGTGGTGGCTGGCGTGCTGTTCCAGGTCACGTAT
ACCTCAGTCTTCGGAGCGTTCGCAGTGTTCGTGCAGCTACGAACAGCCCA
CCTGCACCACGCGCTGGAGTGGCTGCGGCAAGGACACCCCGTGCCAACCG
TGGTGGCTGGCGTGCTGTTCCAGGTCACGTATACCTCAGTCTTCGGAGCG
TTCGCAGTGTTCGTGCAGCTACGAACAGGGCACCTGGTGTCGTCGATTTT
GGTGCACATGTTGTGCAACTTCATTGGCGTGCCTGACATCACCTTCAGCA
TTGCCCCCGGGAATCCCCGGGAGTCCACTCGCACTTCGGTTTTGTACGAG
CACCGCAAAGGGCACCTGGTGTCGTCGATTTTGGTGCACATGTTGTGCAA
CTTCATTGGCGTGCCTGACATCACCTTCAGCATTGCCCCCGGGAATCCCC
GGGAGTCCACTCGCACTTCGGTTTTGTACGAGCACCGCAAAGGCCTCGGG
TGCTTCTACGGGGTAGGCATATGTCTCTTTTTTTGGCTACTGCGCCCTTT
GACGTCTCCTAGATTGTACGGCTCTGTGCTGTGGCCAACTGGGGCATCGC
ACGCGTGAGCCTCGGGTGCTTCTACGGGGTAGGCATATGTCTCTTTTTTT
GGCTACTGCGCCCTTTGACGTCTCCTAGATTGTACGGCTCTGTGCTGTGG
CCAACTGGGGCATCGCACGCGTGA
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