mRNA_C-linearis_contig82.16034.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A835Z1X7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X7_9STRA) HSP 1 Score: 241 bits (616), Expect = 2.850e-72 Identity = 143/336 (42.56%), Postives = 186/336 (55.36%), Query Frame = 3
Query: 30 MSGYDFGNRSQSEAWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVD--DGLPVRRWIGL-GTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPREST------------RTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
M F Q + WA C+L S T+V SLY+VPAR+R L R +P QI AR +V V V+V LLA+P D WIGL G E L A+ L ++CCLFLGPL +A MS K +V +G +RP AA A+L + T+ Y+ +RNL+VGP+ EEVVFRGC + +LL AG SR I SPLLFG AH HH E LR G VL Q++YTSVFGA + LRTGHL ++ H+LCNF+G+PD++F++ PG+ T R + + + + YGVG+ LFF L PLT S LW
Sbjct: 1 MGPVTFPLAQQWQGWALCFLLSCTYVGSLYMVPARIRALRRDNPTQILARFGSVSAAAAVCVMVLKLLAKPSQSPDAADFHVWIGLPGGEGLVCAVACSLTLICCLFLGPLMCMALMSFKRRTQDVDVFGNARPAERRRSLLRAAAADLLTRSGATVQPYATLRNLLVGPVTEEVVFRGCFLPILLSAGASRGAITCASPLLFGLAHAHHIREGLRNGRGFLAAAVPVLVQLSYTSVFGALVALIHLRTGHLCATAACHILCNFMGLPDLSFNVPPGDYARPTYHLLLAINDSDGRCNGRRSNAQVIWASYGVGVILFFRLFYPLTETSAAASHLW 336
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: D7FJL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL4_ECTSI) HSP 1 Score: 224 bits (572), Expect = 1.550e-68 Identity = 109/137 (79.56%), Postives = 116/137 (84.67%), Query Frame = 3
Query: 600 KIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLWPTGASH 1010
KI+WLSPLLFGFAHLHH LEWLRQG+ V V G+LFQ+ YTSVFGAFA FVQLRTGHLVSSILVHMLCNF+GVPDITFSIAPGNP ESTRTSVLY+HRK L C Y VGI LF L+RPLTSP LYGSVLW G H
Sbjct: 2 KIVWLSPLLFGFAHLHHVLEWLRQGNSVRAVAVGMLFQIAYTSVFGAFAAFVQLRTGHLVSSILVHMLCNFMGVPDITFSIAPGNPGESTRTSVLYKHRKRLWCCYVVGIFLFGGLIRPLTSPGLYGSVLWSQGVLH 138
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A2D4BGL3_PYTIN (Prenyl protein protease n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGL3_PYTIN) HSP 1 Score: 171 bits (433), Expect = 9.810e-46 Identity = 110/297 (37.04%), Postives = 155/297 (52.19%), Query Frame = 3
Query: 102 FVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
+V LY +P +RRLPR P I AR V + V + + + + W+G+ + L AA+++PL V LF G L +++ L + ISR W + L ++T ++RN ++GP+ EE VFR C V +L+ A S +II SPL FG AHLHH +E L+ G + V FQ+ YTS+FGA+A F+ LRTGH VS L+H+ CN +G+PD++F NP S L+ R + Y +GI LF LL PLT P LY S LW
Sbjct: 21 YVGVLYTLPRSIRRLPRDHPTHILARFLLVCIFCALCPFVLAMFYEYDEASISFAEWLGIRYQGLLAAIVIPLAVTALLFAGSL-----IANALRFVS-----ISRQFHQDGAWLALKNSTLYY--SITHDKLPSLRNFILGPLTEEFVFRSCMVPLLICAEFSAKQIIIGSPLTFGVAHLHHFIEHLKSGRSIKDASLIVGFQLIYTSLFGAYATFIYLRTGHFVSIFLIHVFCNVMGLPDLSFF----NPESS-----LHSFRIVILASYAIGIYLFSQLLVPLTEPALYESELW 296
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A8K1FR09_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FR09_PYTOL) HSP 1 Score: 170 bits (431), Expect = 3.750e-45 Identity = 110/304 (36.18%), Postives = 159/304 (52.30%), Query Frame = 3
Query: 81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
C + +V LY +P +RRLPR P I AR + + V + + +D + W+G+ E L AL++PL+V LF G L +A + ++ +S+ H W + L ++T ++RN ++GP+ EE VFR C V +L+ A S +II SPL FG AHLHH +E L+ G + + V FQ+ YTS+FGA+A FV LRTGH +S L+H+ CN +G PD++F +P EST L+ R + Y GI F LL PLT P +Y S LW
Sbjct: 40 CLCMAAAYVGVLYTLPWSIRRLPRDHPTHILARFLLICIFCALCPFVLAMFYEYDEDSISFAEWLGIRVEGLLPALIIPLVVTAVLFAGSL--VASILRLVS--------VSKQFQHGGMWLALKNSALYY--SITHDKLPSLRNYILGPLTEEFVFRSCMVPLLICADFSAKQIILGSPLTFGVAHLHHFVEHLKSGRSIKEALLIVGFQLMYTSLFGAYATFVYLRTGHFISIFLIHIFCNVMGFPDLSF-FSP----EST----LHPFRAVILGTYFAGIYFFSVLLMPLTEPSIYESELW 322
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: K3WRZ9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRZ9_GLOUD) HSP 1 Score: 165 bits (418), Expect = 1.580e-43 Identity = 109/304 (35.86%), Postives = 153/304 (50.33%), Query Frame = 3
Query: 81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
C + +V LY +P +RRLPR P I AR + + V + + + W+G+ E L A++LPLL+ LFLG L +++ L V+ S W + L ++T ++RN ++GP+ EE VFR C + +L+ A S +I+W SPL FG AHLHH +E LR G LFQ+ YTS+FGA+A F+ LRTGH VS +VH+ CN +G PDI+F NP S L+ R + Y VGI F +L P T P +Y S LW
Sbjct: 14 CLGMAAAYVGVLYTLPRSIRRLPRDHPTHILARFLLICIFCALCPFVLAVFYDHDESRISFAAWLGIRYEGLLPAVVLPLLITAMLFLGSL-----LANALRLLNVSKQFHSNGL-----WFAIKNSALYY--SVTRDQLPSLRNYILGPLTEEFVFRSCMIPLLVCADFSVKQIVWGSPLTFGVAHLHHFVEHLRNGRSPKDAALIALFQLLYTSLFGAYASFMYLRTGHFVSIFVVHVFCNIMGFPDISFF----NPENS-----LHPFRIMILGAYFVGIYGFTRVLGPWTDPAIYSSELW 296
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A024FZZ9_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZZ9_9STRA) HSP 1 Score: 164 bits (415), Expect = 9.110e-43 Identity = 107/306 (34.97%), Postives = 154/306 (50.33%), Query Frame = 3
Query: 81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLWPT 998
C + +V LY +P +R+LPR P I RL +L + V +Q D L W+G+ ++ L AL++P+++ LF G L +S+ L V+ R +P A + +T A+RN +VGPI EE VFR C + +L+ + S +II SPL FG AHLHH +E LR G + V FQ+ YT++FGA+A F+ +RTGHL+ LVHM CN +G PD+TF P + S R +L + G+ YG + W T P +Y S LW T
Sbjct: 39 CLCMAAAYVGVLYALPKNIRQLPRDHPTHIIGRLFLILILCTLCPFVLAAFSQQDDRSLSFAEWLGIRSDGLLKALIIPVVITAVLFTGSL-----LSNGLRILNVS-------RQYPSNRLCNAVRNSSFVYAMTRERLPALRNYIVGPITEEFVFRSCMIPLLICSDFSHKQIILASPLTFGIAHLHHFIEHLRGGRSLWDAALIVGFQLLYTTLFGAYATFIYMRTGHLIGVFLVHMFCNIMGFPDVTF-FNPDHSLHSFRIILLGAYLLGI---YGFSRIVISW-----TEPDIYVSRLWNT 323
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A0P1B321_PLAHL (Caax prenyl protease 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B321_PLAHL) HSP 1 Score: 163 bits (412), Expect = 1.290e-42 Identity = 108/312 (34.62%), Postives = 162/312 (51.92%), Query Frame = 3
Query: 81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPT---VVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLWPTGAS 1007
C L + +V LY +P +RRLPR P I AR + V + D + +W+G+ E L A+ +PL V LF G L +++ + V+ + H + +A + + ++T ++R V+GP+ EE VFR C + +L+ A + +I+ SPL+FG AHLHH +E++R G + +VAG FQ+ YTS+FGA+A F+ LRTGH S LVH+ CN +G PD+ F +PGNP R +L G ++ +GI F +L PLT P +Y S LW AS
Sbjct: 14 CSLIAAAYVGVLYTLPHAIRRLPRDHPTHILARFLLICIFCAFCPFVLAVFYDHDDASMSFAQWLGIRREGLTQAIFMPLFVTSVLFTGSL-----LANAMRMINVS------RQFHSNGFWLAIKNSVLYY-SITHDRLPSLRTYVLGPLTEEFVFRSCMIPLLVCAKFTIKQIVVGSPLIFGAAHLHHFMEYVRHGRSLKDAALIVAG--FQLVYTSLFGAYATFIFLRTGHFASIYLVHVFCNVMGFPDLAF-FSPGNPLHPFRIVLL-------GAYF-LGIYGFSLILMPLTEPMIYSSELWNITAS 302
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A3R7JWH5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A3R7JWH5_9STRA) HSP 1 Score: 162 bits (409), Expect = 3.410e-42 Identity = 108/304 (35.53%), Postives = 152/304 (50.00%), Query Frame = 3
Query: 81 CWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
C + +V LY +P +RRLPR P I AR + + V + + + +W+G+ E L A+++PLL LF G L + + L V+ S W + L ++T ++R V+GP+ EE VFR C V +L+ A + +I+ SPL+FG AHLHH +E++R G V FQ+ YTS+FGA+A FV LRTGH VS LVHM CN +G PD+TF NP L+ +R L Y +GI F LL PLT P +Y S +W
Sbjct: 14 CSCMAAAYVGVLYTLPHAIRRLPRDHPTHILARFLLICIFCALCPFVLAVFYDHDEASMSFAQWLGIRWEGLVQAIVVPLLATAVLFTGSL-----LGNALRLLNVSKQFHSNGM-----WFAIKNSALYY--SITHDRLPSLRTYVLGPLTEEFVFRSCMVPLLVCAEFTVKQIVLGSPLMFGAAHLHHFMEYVRHGRSPKDAALTVGFQLIYTSLFGAYATFVFLRTGHFVSIFLVHMFCNVMGFPDLTFF----NPENG-----LHPYRIVLLGAYLIGIYGFSRLLMPLTEPAIYSSEMW 296
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A8B7YBK9_ACAPL (Farnesylated proteins-converting enzyme 2 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YBK9_ACAPL) HSP 1 Score: 153 bits (387), Expect = 3.260e-39 Identity = 112/327 (34.25%), Postives = 169/327 (51.68%), Query Frame = 3
Query: 21 APGMSGYDFGNRSQSEAWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKAR-LAAVLCTTGVTVLVTCLLAQPVD-DGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKLAWYEVTPYGISRPRVHPLPWHVAARAELANKGNLTLGAYSAIRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWLRQGHPVPTVV-AGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYGSVLW 992
+PG F S +A C L +IT+V SLY+ L PR DP+ IK R L+A + T V + Q D G + + +G+ L +L +PLL+ LFLGPL + + +++P + LP AR++ G A+RN +VGP+ EE+VFR C + +L+ + + +++ PL FG AH+HH +E LRQG P V+ G +FQ YT+VFGA + F+ LRTGH+++ I+VH+ CNF+G P F P + R + + VG+ LF +LL PLTSP Y + ++
Sbjct: 4 SPGKDQLIFQCGSSMKAVLTCLLLAITYVGSLYIWRTNL---PRDDPSTIKRRSLSAAIVTLLAPVCILTQAHQAKDVKGYTIWQHLGVRQAGLITSLSVPLLLTMVLFLGPLYMLLISDTR----QLSPVVL-------LPREWLARSK---------GMAIAVRNYIVGPVTEEIVFRACMLPLLVPC-LGNLRAVFVCPLFFGVAHVHHVIEGLRQGARRPFVIWVGAIFQFFYTTVFGALSAFLFLRTGHVIACIIVHIFCNFMGFP--AFDEIPNHTPLQ---------RAVICATFVVGLLLFLYLLLPLTSPERYANEMY 295
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Match: A0A7S2RW65_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW65_9STRA) HSP 1 Score: 152 bits (384), Expect = 2.010e-38 Identity = 115/314 (36.62%), Postives = 157/314 (50.00%), Query Frame = 3
Query: 69 AWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKARLAAVLCTTGVTVLVTCLLAQPVDDGLPVRRWIGLGTERLWAALLLPLLVVCCLFLGPLATIACMSHKL-----AWYEVTPYGISR-PRVHPLPWHVAARAELANKGNLTLGAYSA---IRNLVVGPIAEEVVFRGCTVAVLLGAGVSRTKIIWLSPLLFGFAHLHHALEWL-RQGHPVPTVVAGVLFQVTYTSVFGAFAVFVQLRTGHLVSSILVHMLCNFIGVPDITFSIAPGNPRESTRTSVLYEHRKGLGCFYGVGICLFFWLLRPLTSPRLYG 980
AW C S +VVSLYL+PAR++ PR DP I AR AAV ++ +G L A+ +PL V+ L+ GP+A + M+ L W T Y +S R PL A +A TLG+ S+ RNLVVGP+ EE+VFR C + +L+ AGV I++L+PL+F AH HH LE R G V + Q YT +FG + F+ +RTGHL + I+ H++CNF+ +PD +F AP E S LY R L Y +GI FFW + T+ YG
Sbjct: 10 AWLACLGMSGLYVVSLYLLPARIKAKPRDDPGHIMARTAAVASVAAASLAWVIYTMSGTCGTSSALAMMGFRWATLGQAVGIPLGVISSLYAGPIAVLFSMALVLRTRHPVWLRATTYRLSYVDRPTPLSTSGALWESIA----YTLGSESSHVHFRNLVVGPLFEELVFRACMIPMLIFAGVRERTILFLAPLVFCTAHAHHILEKAPRIG--VARALQETAGQQIYTYIFGVLSGFIFMRTGHLSAPIIWHVICNFLQLPDPSFH-AP----EGQYLSPLYPSRWVLSLVYCLGIGAFFWSMAHWTTESAYG 312 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig82.16034.1 >prot_C-linearis_contig82.16034.1 ID=prot_C-linearis_contig82.16034.1|Name=mRNA_C-linearis_contig82.16034.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=329bp MSGYDFGNRSQSEAWAWCWLASITFVVSLYLVPARLRRLPRSDPAQIKARback to top mRNA from alignment at C-linearis_contig82:838432..843131- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig82.16034.1 ID=mRNA_C-linearis_contig82.16034.1|Name=mRNA_C-linearis_contig82.16034.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4700bp|location=Sequence derived from alignment at C-linearis_contig82:838432..843131- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig82:838432..843131- >mRNA_C-linearis_contig82.16034.1 ID=mRNA_C-linearis_contig82.16034.1|Name=mRNA_C-linearis_contig82.16034.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at C-linearis_contig82:838432..843131- (Chordaria linearis ClinC8C monoicous)back to top |