mRNA_C-linearis_contig82.16017.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 319 bits (817), Expect = 1.040e-85 Identity = 374/1292 (28.95%), Postives = 536/1292 (41.49%), Query Frame = 1
Query: 412 ALQNSAPSDLMAKNAANGAGLLMLAVSMDEVPVFKHLASALTKRLGTKLLARQLRFEDDKEETLMFYAVAF--SPAMFSAVKRLVRDTIGRAGLIEQLRHNCAKGTNVLMKA--SKNQQVFEEVWEL-LEATNCLDELKDDSDKEGKNWVLYAAEAGNLCVFDKF--------GQS---------------LEDQCFQLEAEDA-RGWNGFMYAARGI-------------GVHGVEFLMELRQLCVSRTADLQMLREQLARSAGDADRSTMLTHAAIGGLDSYRLVCE-----------------MMQQAGCDGLPDENHSI---------VLLSWAAQGGNTAVLTVVAGGIKAQAFPDGHSVGEWYGSNND------PAGTEEKDRILRAVRLCAQRREGVSLFASAIESEQSAMISAVAEGIRALV----PEPAVCWRLLCG---------DANPLAIAAAKSVEVFDKALSILQEMAS-LDSTGEAQSQLGSLLLPE---------AEDTPLVSAVYSEQDVLFDHVLKTINDLLRDPLTGNMILAQVRDSMRDISEEDKLTEKWISAKMLAKVLEAAKNGGSNSNSG--YFNAHDLDSFMKLVVELGAFEHIRALVLIGCHLAS-HFATLLSKIGADESNTTECMMIAVTSASNPFVECGVASHAINQATVKRQRDHAALARLQKKIGELALELIEHLPHSVNGVGEELAKGEPDLEPFKAIGKV-KPSELLGFVVVGWILEGSGRPSARDNDSHQRGGLNALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSYTQ-GVPEAAR-----KREEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLLQGFEFYEES----MKFQYRTVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLRSQD-IPANEWAFYIIMMAVAWREVLEF-----------------SNASKFEPGLGE------------SIERY-FLDKWNVLDVLTVAFVFVTFVFRVIELTSGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDH---PVVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGII---YEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLI 3843
ALQ+ AP D G LL A + F +A + ++G + LA++LR D L+F A A + F LV +G+ GL+EQL +G +LM A S N ++E+ + + + D +G N + +AAEAG V K G S L D + A+D+ R +Y+ G H + ME+ + + + E+++++ G T L HAA GGL S L + CD + +LL+ AA+ G+ VL VV IK F + + + P G EK R + VR + + G SLF+ AI S Q+ + V I L PE W +L G +A+PLA AA+ S+E D + S L + + +L L+P+ + +PLV A +S +LF V T L + P W+ L + + K+GG S Y A+ + + + E GAF +R LV G L H LL IG E + E ++ AV +ASNPF S + +A V L RLQ +I LE + LEP + K+ K + G P +D L A+ G AL+ L LVLDYV +KF+ TLP W+++NPF+ IN+ Y Y V + A+ K ++A+ P I LL LQG++ + + T+ PGLQF+LAG++GKP +++ VP IR V+ + SYL +VLF S V L+ D IP +E FYI + WREVLEF + EPG+ + RY F D WN +D T+ +FV F+FR+I + LF AQFF A +APLL SR+L LSQI LGPMTQVI+ M+ + FS + +VML FA F A++ E +P C ++D P+ AFGT G +LLT+FSS LG FD+F D G DC + G+ + V + + S+ LLNLLIAVLSTAH EV NA KEF LARA++++QS V + PPP NL+K G++
Sbjct: 53 ALQSKAPED--------GQNLLTYAAAQGRDAWFLFIAGKIRSKMGVRALAKELRELDIDRAPLLFNAAASRGEKSCFRTAHDLVYKALGKGGLLEQLGAVDGEGRTMLMHAARSNNSDAYDEIVGIYFKVVPLTSSGYTEKDHKGMNCLHHAAEAGCSEVLGKVIKKYSDAGGSSYAERDNNNRTPVMCVLSDASREERADDSLRDKFTLLYSNMSTTCGEQDEKVCTHDGGHAKQGWMEMTDVPTQQISR----SEEISKARG----VTELMHAARGGLVSLELALNEPLPSSRLEDGSISLDGALNVEACDEPASDEPRWEPQPAWGKGLLLAAAAERGDIDVLHVVLTAIKDNKFTKEPNTDRFTLRKQESRLAELPYGDGEKVRTV--VREMS--KGGKSLFSEAILSGQTVAVKHVYRLIVKLFGKTHPET---WAILTGRDFNSGKVAEASPLACAASASMEPCDHGRDTFDLVYSYLQTHAPDEKKLRIQLVPQPPPLDLTAKTQISPLVGAAFSSNWILFWRVYDTYTTLAKKP--------------------------WLRTNALRRAT-SDKSGGEELMSWREYLRAYSSRA-VHVASERGAFTDLRDLVKEGFPLHDDHIPALLVSIGDHEQDIIETVLFAVANASNPFGMAAGVSRFLRRARVDHPMHQRGLRRLQTRIDRFTLE-------------------QWMLEPSLLVEKINKAKKYRG-------------PVYKD----------PLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPHWSSRNPFQPTINEGLYKYDNFEVYDLAKLLRGSKNDQATGRTAPSGASSASTGSTNRGSFLWRSPG-------------------------SIMSFLLRFLQGWDHPRSNDQSVWSIPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYEIFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRTSGGPRTEEGGRVEPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDTSTICCIFVAFIFRMIA-RFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCG---EHSEP-QCTLDDDDAFPLRDAFGTFGDSLLTVFSSALGGPEFDLFDDA-----GSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSARSVAHRRPPPPLNLVKLGFGVL 1216
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 311 bits (797), Expect = 4.080e-82 Identity = 330/1120 (29.46%), Postives = 474/1120 (42.32%), Query Frame = 1
Query: 1204 VLLSWAAQGGNTAVLTVVAGGIKAQAFPDGHSVGEWYGSNNDPAGT----EEKDRILRAVRLCAQRREGVSLFASAIESEQSAMISAVAEGIRALVPEPAVCWRLLCG---DANPLAIAAAKS-------VEVFDKALSILQEMASL------DSTGEAQSQLGSLLLP--------------EAEDTPLVSAVYSEQDVLFDHVLKTINDLLRDPLTGNMILAQVRDSMRD---------ISEEDK--------------------LTEKWISAKMLAKVLEAAKNGGSNSNSGYFNAHDLDSFMKLVVELGAFEHIRALVLIGCHLASHFATLLSKIGADESNTTECMMIAVTSASNPFVECGVASHAINQATVKRQRDHAALARLQKKIGELALELIEHLPHSVNGVGEELAKGEPDLEPFKAIGKVKP-----SELLGFVVVGWILEGS--GRPSARDNDSHQRGGLNALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSYTQ--------------GVPEAARKREEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLLQGFEFYEESMKFQYR---------------TVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLR-SQDIPANEWAFYIIMMAVAWREVLEF------------------------------------SNASKFEPGLG-----ESIERY-FLDKWNVLDVLTVAFVFVTFVFRVIELT-----SGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDHPVVYAFGTLGGALLTLFSSMLGEFNFDIFYD-----RYQGSDGEDCGGIIYEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLIWPLGSPTPENDDNQWSRWWTIT--------------------------TGALHRLIFAVVVGLGALGLSTVLWALSFPLVAWKLSLWL 4029
+LL+ AA+GG+ VL V IK +F +G S N D T EE R+ RAV G LF A+ S ++ + V + + P+ W+ + G N L A++ S VEV S LQE A D T + S LP E+ TPL A S VLF + + L + +L + + +D + E D L E + A++ V+E ++ S F + + + L E GAF+ +R LV G L L DE + +M AV +ASNP V S + +A V A L LQ+ + L +L++ LPH+V G+G L + P + + G + + L G++VV WILE R + + ++ L +A+ G +AL + LVLDY+ +KFS TLP+W + + IN FY+YT G PEA + +L P + RLL LQG+ + S + Q R TV P LQF+LAG+IGKP +Y VPA+R + YL + LF +CV L+ S IP E AFY+ M WRE+LEF S+ +E G G +I RY F D WN+LD LT++ VF+ F+FR++ + + + FVAQFF+A++APLL +R+L LSQI LGPM Q+I+ ML Q F + + +VM GFA F+A++ +CD + ++G+ G A LT+F + LGEF F+ F D Y S G + G L VA+LV+ ++ +LNLLIAVLSTAH EV N KEF LAR ++ILQS V + +PPPFNL++ VVG + D WW + G L RL+FA +GL A+ L+ +LW LS P VAW++ W+
Sbjct: 381 MLLTAAAKGGHVDVLEHVVHAIKTGSFVEGLS-----DRNADQRHTVYTNEELQRVDRAVEAIVS--SGSYLFGQAVLSGKAEAVLWVYQFLAQRYPKE--LWKNVRGAQDKINALTCASSSSMKCERQGVEVLVAVYSCLQEAAKYEFGTPEDVTKNLKELFLSRSLPMKPTGSKSSARTTVESSSTPLAGAALSGNWVLFQKIYEMYERLTDQRWSREELLRHLPIASQDKIMLGQCQAMHECDPHVHTSFGRGVGNVTAVIWRDLVEAYQRAEVKCAVIELSEMSDIPSWRDTFKSLSRKA-VGLAAERGAFDDLRELVKAGLPLHDDLIPTLLTSAEDEEEVMDIVMYAVGNASNPLVMGAGVSKNLRRAEVDCPMHRAKLRCLQQIVDHLMNQLLDKLPHTVRGMGMTLLR--PMVPHHRLPGLQQHRLDTLANLAGYMVVEWILEPRHLNRQATVGKRYNGPDYMDPLQRALDRGSKALFFVDSPLVLDYIYVKFSCTLPNWASSSSIPKTINAGFYTYTAFDEYEFWEVLSVRPGPPEA---NQGGALQPQP-------------------------------------------WNSKKWDDRLLRFLQGWNPTDMSPEEQPRGRSTRRSDRNKLPHTTVLPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCACVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRXXXXXXXXXXXXXXXXTAAQWASSKRSDTVDYEQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFIFRLLGIREFGGPADPGDYFFVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFG------------SCDAGSD-LDESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRA------SDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQLVVGFLL---------DGVSELAWWAVRGADRCGLRQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIVCWV 1414
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 265 bits (677), Expect = 1.080e-67 Identity = 311/1012 (30.73%), Postives = 435/1012 (42.98%), Query Frame = 1
Query: 1351 DRILRAVRLCAQRREGVSLFASAIESEQSAMISAVAEGIRALVPEP-AVCWRLLCGDANP---LAIAAAKSVE-------VFDKALSILQEMASLDSTGEAQSQLGS-LLLP-----EAEDTPLVSAVYSEQDVLFDHVLKTINDLLRDPLTGNMILAQV------RDSMRDISE----EDKLTE-----KW-ISAKMLAKVLEA-------AKNGGSNSNSGYFNAHDLDSF-----------MKLVVELGAFEHIRALVLIGCHLASH-FATLLSKIGADESNTTECMMIAVTSASNPFVECGVASHAINQATVKRQRDHAALARLQKKIGELALELIEHLPHSVNGVGEELAKGEPDL---EPFKAIGKVKPSELLGFVVVGWILEGSGRPS--ARDNDSHQRGGLNALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSYTQGVPEAARKREEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLLQGFEFYE--ESMKFQYRTVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLRSQD-IPANEWAFYIIMMAVAWREVLEFSN---ASKFEP----------------------------GLGESIERY--------FLDKWNVLDVLTVAFVFVTFVFRVIELTSGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDH---PVVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGIIYE---EGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLIWPLGSPT------------------PENDDNQWSRWWTITTGALHRLIFAVVVGLGALGLSTVLWALSFPLVAWKL 4017
DR+ AVR R G S+F+ AI S ++ + V + +R L + + W L G N L AA+ S+E +FDK S+LQ+ D Q QL +P + + +PLV A +S +LF V T + +LAQ+ R S+ ++ E ED + W I A M +++A + + S + L S+ +K + G F +R LV G L H LL IG E + E ++ VT+ASNPF S + + V L RLQ I + +EL++ LP +V G+G EL G + E F + L GF+ V W LE A +N + ++ L +A+ G + L D+ K S L S + P N +G A+K S+ + XXXXXXXXXXXX + E + + T+ PGLQF+LAG+ GKP ++Y VP IR F + SYL +VLF V L+ D IP E FY+ + WRE+LEF + A + +P G G R F D WN LD T+ + V F+FR+I L LF AQFF A +APLL SR+L LSQI LGPMTQVI+ M+ FS + +VML FA F A++ E +P C ++D P+ AFGT G + +T+F+ LG +F+ F G DC + E G+ L V +++ ++ LLNLLIAVLST H +V NA KEF ARA++I QS V PPP NLIK V G++ G+ P + +QW G L RL FA G+ A+GLST+LW +S P VAW L
Sbjct: 445 DRVQEAVRAINTR--GKSVFSYAILSGRTDAMELVYDLVRGLFGDKTSQTWDTLSGKTNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQT--DDRLLVQRQLSPRFAMPHRGKGKVKISPLVGAAFSSNWILFRKVYDTYEEWTGHRWWRQQVLAQIPSGPPRRRSVLELQEMHDCEDDIPALIIRGAWSIPAVMWRDIVKAYQRAQLCSPDATSRGVPQPLRINPLPSWRDEFKGYSRRAVKEAAKRGTFRSLRDLVQEGFPLHEHHIPALLENIGDHEKDIIETILATVTNASNPFAMGAGLSRTLRTSEVDHPMHQLGLRRLQSIIDDFTMELLDKLPRTVRGMGMELIGGHQPITFGEGFHQGKHHRLGNLAGFIAVQWFLEPRVLLGDVAVENRYKEPDYIDPLRRALDRGSKGLYKYD-----DFETYKLSEIL-STPVKPPTANQ---------EGEQSPAQKEGFISMTFLLRLLQGWDHRDPKRRCNFPSRVFRAKGQEASGAQAXXXXXXXXXXXXXXPVSAAANAQAPASRPEPPNQWRIPHSTMLPGLQFSLAGIQGKPETFYKVPVIRFAFEIFSYLVMLVLFCFSVLLKEHDSIPWGEVTFYVFAAGLLWREILEFRDGMPARRHKPPKRQVSKNDGSTRTGSEQPLSFPRISRLGTGNRFNRMVSAFTRYVFYDTWNFLDTSTIGCILVAFIFRMIAL--DDKFFLFHAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCG---EYSEP-QCTLDDDDAFPLRDAFGTFGDSFVTVFTYALGGPDFEAFQLA-----GSDCRCDLPEGARNAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFHHARARLIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTEVWRVGVWVTRGRSQARMLKPFSTTHQWKT----LEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCL 1422
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI) HSP 1 Score: 246 bits (627), Expect = 1.040e-61 Identity = 229/753 (30.41%), Postives = 339/753 (45.02%), Query Frame = 1
Query: 1951 GAFEHIRALVLIGCHLASHFATLLSKIGADESNTTECMMIAVTSASNPFVECGVASHAINQATVKRQRDHAALARLQKKIGELALELIEHLPHSVNGVGEELAKG--EPDL----EPFKAIGKVKPSEL----------LGF--VVVGWIL---EGSG----------RPSARDND--------------------SHQRGGLNALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSYTQGVPEAARKREEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLLQGFE--------FYEESMK--FQYRTVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLRSQDI-PANEWAFYIIMMAVAWREVLEFSNA----------------------------SKFEP------------GLGE-----SIERYFL-DKWNVLDVLTVAFVFVTFVFRVIELTS----------GKDI---HLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDHPVVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGIIYE-EGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLI 3843
G F+ +RAL+ G + +H ATL+ IG E +M AV ++SNPFV +AS + + +D LARLQ++I + EL+ LP +V GVG EL +PDL EP +EL +G+ VVV ++ EG G A D S L+ L QA+ G A D ++ LVLDY++LK+ T P+ + +NP IN+ F +Y G + Y +PE + LL LLQG++ F E+ + F + TV PG QF LAG++GKP +++VP +R +F SYL + L+ S V ++ DI PA+E FY+ + +RE+LEF +A EP GL + + RYF D WN+LD ++ V + F+FR+I + G + F+A+F +A+ APLL +RVL L+Q+ GPMTQ+I++ML L FS+ + +VM+ FA F +LYS DP C D + ++ TL +LL +F SMLG+ NFD R++ C G +E + G+ L ++V+ +I +LNLLIAVLST H V +NA EF LAR++ I S V+ LPPP NL+ + ++
Sbjct: 947 GTFDGLRALIEKGWNCHAHLATLIGDIGDAEEQVIATVMCAVENSSNPFVTSAIASVCMAKHGRDCSKDRLGLARLQEEIDQFTTELLGKLPQTVKGVGLELISSFEQPDLGKNDEPDGEEEPATEAELARRKNIMANHVGYIAVVVHCLILDWEGGGIKDIKQIAIASQQALDEKAFALCSVLGACVSWLVSKMISATLQDLDPLQQALTKGSDAHDFINAPLVLDYLELKWKCTTPNLDRRNPLDYTINEGFSTYRSGNGK----------YTLPEKGVDIGDTFLERGGTTA-------------------------------EESLLRLLQGWDRGPTRVLRFKEKHLLHGFPHTTVLPGTQFLLAGLLGKPTDFFLVPFVRFMFETFSYLVMLGLYWSSVAIQYSDIIPADEILFYLFAAGLLFREILEFRDALPPSVSSSSSPTSSPSDATMSSDDGEDHGSSEPDSLAARAREERSGLSQRRVTSGLRRYFSKDNWNILDTASIFCVMLAFIFRIIAYIADFAQAATTILGNTLIGQAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQIIWNMLFHLARFSVFMLVVMVSFALAFHSLYS---------DP-NCSEGDE-LFESYRTLRESLLDMFRSMLGDANFD----RFEADRNLTCTGPSWEFDAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSENAITEFHLARSQFIQASAASVEGGRLPPPLNLLMAAILIV 1643
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE) HSP 1 Score: 238 bits (607), Expect = 1.230e-60 Identity = 190/544 (34.93%), Postives = 265/544 (48.71%), Query Frame = 1
Query: 2341 WILEGSGRPSARDNDSHQRGGL--NALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSYTQGVPEAARKREEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLLQGFEFYEESMKFQYR----TVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLRSQD-IPANEWAFYIIMMAVAWREVLEF-----SNASKFEPGLGESI------------------------ERY-FLDKWNVLDVLTVAFVFVTFVFRVIELTSGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDH---PVVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGII---YEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLI 3843
W+LE S + RG + + L A+ G AL+ L LVLDYV +KF+ TLP W ++NPF+ IN+ F+ Y ++ +Y + + LL +LQG++ + Y T+ PGLQF+LAG++GKP +++ VP IR V+ SYL +VLF S V L+ D IP +E FYI + WREVLEF + + GLG + RY F D WN +D+ T+ + V F+FR+I + LF AQFF A +APLL SR+L LSQI LGPMTQVI+ M+ + FS + +VML FA F A++ E +P C ++D P+ AFGT G + +T+FSS LG D+F D G DC + G+ + V + + S+ LLNLLIAVLSTAH EV NA KEF LARA++++QS + V + PPP NLIK G++
Sbjct: 67 WMLEPSLLVEKINKAKKYRGPVYKDPLQSALDRGSDALEFLFSPLVLDYVHVKFAGTLPPWWSRNPFQPTINEGFFEY-----------DDFEVYDLAKLLRGSGNDQAKGGNEPSGTPTASTGSTAGESLGSFLWQLPG-----SFMSFLLRVLQGWDHPRSNESVWYYVPHLTILPGLQFSLAGILGKPETFFKVPVIRFVYESFSYLVMLVLFCSSVLLKEPDFIPRDEVIFYIFAAGLLWREVLEFLDGVPTRRHRISRGLGPEVGGRVKPGISHLGAGSNFNRMVSAFTRYVFYDTWNFMDMSTICCILVAFIFRMIA-RFDSEFDLFYAQFFYALSAPLLFSRLLVLSQIDATLGPMTQVIWRMMSHMLRFSAFIAMVMLSFALAFHAVFHTCG---EYSEP-QCTLDDDDPFPLRDAFGTFGDSFVTVFSSALGGPEIDLFDDV-----GSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHLARARLVVQSAQSVAHLRPPPPLNLIKLGFGVL 584
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 240 bits (612), Expect = 6.900e-60 Identity = 265/874 (30.32%), Postives = 375/874 (42.91%), Query Frame = 1
Query: 1933 KLVVELGAFEHIRALVLIGCHLAS-HFATLLSKIGADESNTTECMMIAVTSASNPFVECGVASHAINQATVKRQRDHAALARLQKKIGELALELIEHLPHSVNGVGEELAKGEPDL---EPFKAIGKVKPSELLGFVVVGWILEGSGRPSARDNDSHQRGG--LNALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSY-------------------------TQGVPEAARK-----------------REEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLL--------------------------------------------QGFEFYEESMKFQ--YRTVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLRSQDIPANEWAFYIIMMAVAWREVLEFSNASKFEPGLGESIERYFLDKWNVLDVLTVAFVFVTFVFRVIELTSGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDHP---VVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGII---YEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLI------------WPL--------------------------------------------GSP-------TPENDDNQWSRW--WTITTGALHRLIFAVVVGLGALGLSTVLWALSFPLVAWKLSLWLAGREARKQEE 4059
K+ + G F +R LV G L H LL IG E + + ++ AV S SNPF S + + V L RLQ + + +++E LP +V G+G L G + E + + + + L GF+VV WILE + + G L+ L +A+ G ALD L+ LV DYV +KF+ TLPSW ++NPF+ +N+ F+ Y ++G+ A ++ R+ + +P XXXXXXXXXXXXXXXXXXXXX + S L Q F ++ ++ + T+ PGLQF+LAGV+GKP ++Y VPAIR VF + +YL + FY D WN LD T+ + VTFVFR+I L D LF AQFF A++APLL SR+L LSQI LGPMTQVI+ M+ FS +++VML FA F A++ + + TC+ ND P + AFGT G + +T+FS+ LG +F+++ + G +C + +E G+ L V ++VI ++ LLNLLIAVLSTAH++V N KEF LARAK+I QS V PPP NL+K V+G + W + GSP TP ++ W++ W G + R++FA G A+ +S +LW LS P VAW L L LA K+ E
Sbjct: 744 KVAAKRGDFTALRELVNEGFPLHDDHMPFLLENIGDHEHDVIDTILAAVASTSNPFAMAAGVSRTLRMSKVDFPMHSEGLGRLQSIMDDFTSKVLEQLPQTVRGMGVALLGGHQPIVFGEGLEQGKRHRLTNLAGFIVVQWILEPNLLVGKINTQKKYAGPDYLDPLRRALDRGSEALDFLNTPLVKDYVHIKFACTLPSWTSRNPFQPTVNEGFFKYDDFDTYPLSEVFSAPDENLGSKDEESRGLKAALKEQFLTKSFLLRFLQGWDHRDSLLKWNIPIGDIRFASKKFKSDTRASNNXXXXXXXXXXXXXXXXXXXXXPGCCGGRFKSIIPSWLLCCNGNVSGNAXXXXXXNARGDAHDSSAHXXXXXXXXXXXSSCRQPLWFNDKPKRWTIPHSTILPGLQFSLAGVLGKPETFYQVPAIRFVFEIFTYL---------------------YVFY---------------------------------DTWNFLDTSTIGCLLVTFVFRMIAL--DDDFFLFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQVIWRMISDTLRFSAFISVVMLSFALAFHAVFHT----CGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYE-----AAGSECRCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKVVLGTLIDATTEPVRFRRWMVRNPPEDENEANPADGAXXXXXXXXGHENDAVEGEAEGDQGNIGGGSPGDCPIAGTPGDEFIAWTQTHEWRTFEGGVQRVLFAFTFGAAAIVMSAILWTLSVPWVAWCL-LRLAHPVVEKRAE 1551
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 222 bits (566), Expect = 8.420e-55 Identity = 211/677 (31.17%), Postives = 300/677 (44.31%), Query Frame = 1
Query: 1930 MKLVVELGAFEHIRALVLIGCHLASHFA-TLLSKIGADESNTTECMMIAVTSASNPFVECGVASHAINQATVKRQRDHAALARLQKKIGELALELIEHLPHSVNGVGEELAKGEPDLEPFKAIGKVKP-----SELLGFVVVGWILEGS--GRPSARDNDSHQRGGLNALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSYTQ----GVPEAARKREEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLLQGFEFYE---------------ESMKFQYRTVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLR-SQDIPANEWAFYIIMMAVAWREVLEF------------------------------------SNASKFEPGLG-----ESIERY-FLDKWNVLDVLTVAFVFVTFVFRVIEL------TSGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDHPVVYAFGTLGGALLTLFSSMLGEFNFDIFYD-----RYQGSDGEDCGGIIYEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEV 3717
++L E GAF+ +R LV G L TLL+ SNP V S + +A V A L LQ+ + L +L++ LPH+V G+G L + P + + G + + L G++VV WILE R + + ++ L +A+ G +ALD + LVLDY+ +KFS TLP+W + + IN FY+Y E R E PE + RLL LQG+ + + K + T+ P LQF+LAG+IGKP +Y VPA+R + YL + LF SCV L+ S IP E AFY+ M WRE+LEF S+ + G G +I RY F D WN+LD LT++ VF+ FVFR++ + T D + FVAQFF+A +APLL +R+L LSQI LGPM Q+I+ ML Q F + + +VM GFA F+A++ +CD + ++G+ G ALLT+F + LGEF F+ F D Y S G + G L VA+L++ ++ +LNLLIAVLSTAH E+
Sbjct: 695 VRLAAERGAFDDLRELVKAGLPLHDDLIPTLLT--------------------SNPLVMGAGVSKNLRRAEVDCPMHRAKLRCLQRIVDHLINQLLDKLPHTVRGMGMTLLR--PMVPHHRLPGLQQHRLDTLANLAGYMVVEWILEPRLLNRQATVGKRYNGPDYMDPLQRALDRGSKALDFVDSPLVLDYIHVKFSCTLPNWASSSSIPKTINAGFYTYNAFDEYNFSEVLSVRPEP-----PEANPGGGSQPCNS---------------------------------KKWDDRLLRFLQGWNPTDMNPEEQPRGKSTRRSDRNKLPHTTILPMLQFSLAGLIGKPAVFYNVPAVRFALEFLHYLVMLGLFCSCVKLQDSYRIPPAEVAFYVFMAGTLWREILEFCDGVPARHRRHRKNKHIKEGNQANMATAVQGASSKRSDMVDYGQGRGLKRVASAITRYLFYDTWNLLDTLTLSTVFLAFVFRLLGIREFGGPTDPGD-YFFVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQIIWRMLSQTLRFGVFIVVVMAGFALAFNAVFG------------SCDAGSG-LDESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRA------SDAGTFLLVAYLIVLAVVMLNLLIAVLSTAHGEL 1291
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE) HSP 1 Score: 176 bits (446), Expect = 4.730e-41 Identity = 202/716 (28.21%), Postives = 280/716 (39.11%), Query Frame = 1
Query: 2080 SASNPFVECGVASHAINQATVKRQRDHAALARLQKKIGELALELIEHL------------------------PHSVNGVGEELAKGEPDL---EPFKAIGKVKPSELLGFVVVGW-----ILEGSGRPSARDNDSHQR----GGLNALAQAVRSGPRALDLLSEALVLDYVDLKFSRTLPSWNAQNPFKNNINQAFYSY----TQGV---------PEAARKREEASLYAVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDISQRLLSLLQGFEFYEESMKFQYRTVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLRSQDIPANEWAFYIIMMAVAWREVLEFSNASKFEPGLGESIERY--------FLDKWNVLDVLTVAFVFVTFVFRVIELTSGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDH---PVVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGIIYEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLI-------WPLG-------SPTPENDDNQWSRWWTITTGALHRLIFAVVVGLGALGLSTVLWALSFPLV 4005
S SNPF S + + V L RLQ I + E E + P V G+G EL G + E F + L GF+ V + +GR + + SH R ++ L + + G + LD+++ LV DYV +KF+ TLP W ++NPF+ +N+ Y Y T G+ P A + E S + +QR + + T+ PGLQF+LAG+ GKP ++Y R I+ F + V R P + + L S+ PG R F D W LD T+ + V F+FRV L LF A+FF A +AP L SR+L LSQI LGPMTQVI+ M+ FS + +VML FA F A++ E ++P C +D P+ AFGT G + +T+F+ D + +G+ G+ L V ++V ++ LL LLIAVLST H +V NA KEF ARA I QS V PPP NLIK V G++ W G S S G L RL FA G+ A+GLS +LW +S P V
Sbjct: 80 SLSNPFAMGAGLSRTLRTSEVDHPMHQLGLRRLQSIIDDFTKEACESIKSPRLVLNVPRGVSVSQRAALGQAPTPVRGMGTELIGGHQPITFGEGFHQGKHHRLGNLAGFIAVALSESRIVATNTGRVANKRVTSHSRYKEPDYIDPLRRVLDRGSKGLDMVNSPLVRDYVHVKFTGTLPHWTSRNPFQPIVNEGLYKYDDFETYGLSEILSTPVKPPTANQEGEHS-----PAQKQGFISMTFLLTLPSQAPTPPMPVPPVQPVSATTNAQAPACRQKPTNQR---------------RIPHSTMPPGLQFSLAGIQGKPHTFYKGLLWR----------EILEFRNGVPARRHKPPKRQVPKNEDNTRAGSEQSLSSPRISR--PGTRNRFNRIVSTFTWNVFYDTWKFLDTPTIGCILVAFIFRVTTL--DDKFFLFHARFFYALSAPRLFSRLLVLSQIDATLGPMTQVIWRMMSHTLRFSAFIAMVMLSFALAFHAVFHTCG---EHIEP-QCTFDDDDAFPIRDAFGTFGDSFVTVFT--------DCRCNLPEGA----------RNAGIFLLVVYMVTMTVVLLKLLIAVLSTTHGKVYDNAEKEFHHARACFIYQSARVVSRSRPPPPLNLIKLVCGILLDAGTMLWRAGAWFRRGRSQAKMLKPFSTSHQRKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWV 739
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 155 bits (393), Expect = 2.880e-34 Identity = 133/387 (34.37%), Postives = 199/387 (51.42%), Query Frame = 1
Query: 2845 TVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLFLSCVTLRSQDIPANE----WAFYIIMMAVAWREVLEFSNASKFEPGLGESIERYFLDKWNVLDVLTVAFVFVTFVFRVIELTSGKDIHLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDHPVVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGIIYEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLIWPLGSPTPENDDNQWSRWWTITTGALHRLIFAVVVGLGALGLSTVLWALS 3993
T PG QFT+AG++G P YY VPA+RM+ + YL +V F S V L +D P +AFYI+ ++ + + GL Y D WN+LD+L + V + R + + L+ A +APL+ SR+LF +Q+ R GPM QV+FSM +L F +V+ +VMLGFA +F AL+ D++ T GG LTLF +MLGE + F+ + G+ Y+ L+V +LV+ ++ LLNLLIAVLST+H++V+ A +EF++++A+II V +LPPPFNL++ ++ L P D + T A+ R+ F + +G A TVLW LS
Sbjct: 784 TFLPGAQFTIAGLVGMPDQYYRVPAMRMLLDLAVYLGMLVFF-STVVLFHEDGPLTPGEAAFAFYILA------GIITEGQEMRRDFGL------YAADHWNILDLLGLGLVTGGLIVRCADGDNSWGRALY------ALSAPLIFSRLLFFAQMLRFHGPMIQVVFSMTAELVKFGVVIIVVMLGFAMSFHALFG--------------DVD---------TFGGTCLTLFKAMLGEVD---FFGSFPGNQ--------YDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSL------PVMVRDRSGQGTASTRAQEAVGRMAFWLALGPVAAACGTVLWVLS 1111
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.110e-31 Identity = 119/378 (31.48%), Postives = 195/378 (51.59%), Query Frame = 1
Query: 2770 DISQRLLSLLQGFEFYEESMKFQYRTVSPGLQFTLAGVIGKPVSYYVVPAIRMVFVVISYLATIVLF-LSCVTLRSQD-IPANEWAFYIIMMAVAWREVLEFSNASKFEPGLGESIERYFLDKWNVLDVLTVAFVFVTFVFRVI-------------ELTSGKDI-----HLFVAQFFMASTAPLLSSRVLFLSQIGRALGPMTQVIFSMLRQLGLFSLVLTLVMLGFAATFSALYSVDTVLVEQLDPVTCDINDHPVVYAFGTLGGALLTLFSSMLGEFNFDIFYDRYQGSDGEDCGGIIYEEGGVVLYVAFLVITSITLLNLLIAVLSTAHAEVDQNASKEFQLARAKIILQSGEDVQNDVLPPPFNLIKPVVGLI 3843
D SQ ++ +LQG +S + Y PGLQF LAGV GK +++ VPA+R+ V+ Y + +F L V LR I A + + + ++ W++V E A S+ + + WNV++ +A + F FR+ +L++G +++AQ+F A++AP + +VLFL+Q+ +LGP+ F+++ L F ++ ++ LGFA F A++ ++ + D + + T ++LTLFSSMLG F+F++F G E G VL V FL + +ITLLNLLIA+L+TAHA ++ NA KE L+ A II Q ++ D LP P N+ + ++ +
Sbjct: 608 DESQLMVYILQGG--CPDSPSWTYL---PGLQFILAGVAGKTAAFFGVPAMRLALDVLVYTGVVSVFVLKVVVLRDVGRITAWDVLWLVYLVGAIWKQVHEVQEAG--------SLRVHLFNPWNVVEATKLASLSTAFFFRMHAWVCDGHGEYFCGQLSTGSGSVNELNEVYLAQYFQAASAPFVLGKVLFLTQVHSSLGPLMHSAFNVIGDLTRFGALMLVITLGFALAFYAMFG----------SMSASLPDGGDIAEYDTYYSSILTLFSSMLGNFSFEVFK------------GAPMAEAGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKEAVLSEAVIITQYRRAMRLDSLPSPLNVPQELISCV 950 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig82.16017.1 >prot_C-linearis_contig82.16017.1 ID=prot_C-linearis_contig82.16017.1|Name=mRNA_C-linearis_contig82.16017.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1353bp MVVCTRQLTRQELVPEMDLREAIRSKSVANVQDALQNSAPSDLMAKNAANback to top mRNA from alignment at C-linearis_contig82:652910..667595+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig82.16017.1 ID=mRNA_C-linearis_contig82.16017.1|Name=mRNA_C-linearis_contig82.16017.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=14686bp|location=Sequence derived from alignment at C-linearis_contig82:652910..667595+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig82:652910..667595+ >mRNA_C-linearis_contig82.16017.1 ID=mRNA_C-linearis_contig82.16017.1|Name=mRNA_C-linearis_contig82.16017.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=8118bp|location=Sequence derived from alignment at C-linearis_contig82:652910..667595+ (Chordaria linearis ClinC8C monoicous)back to top |