mRNA_C-linearis_contig82.16009.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: D7FYH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYH6_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 1.440e-155 Identity = 259/394 (65.74%), Postives = 284/394 (72.08%), Query Frame = 1
Query: 337 LHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDSYSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLI--------------ASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSE--------AFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEK-----GAALKHEGIRDPAVATDAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWL-SCPAGASGGVSMGVFSDGNPYGVPDGLVCSFPVECGEGRHQILEGFQPDGAMLEASAQELVDERQEALETLRES 1434
+HG VFGEGRKVRLRLLDIE C GALQG AMEI D S+LVTEVV T DPEVAF+GADVAVLLGGFPRLPGMERRDLIAKN PIMAEHGRALAKCA DGVRVLVVANPACTNCL+ A+ SAPSIPRSHFSSLARLDQDRLSAMLAE SE S + LP R + R L VRG Y+WGNHSPTMWPDVS AE K GRWVP++ G G+ PA D + W +W+ ETLVPAVR+RGT+VIEARGKSSALSAANAIANHLKDWL S +G GVSMGVFSDGNPYGVPD +V SFPVECGEGRH+IL GF+PD AML+ SA+EL++ER+EALETLRES
Sbjct: 1 MHGRVFGEGRKVRLRLLDIEACVGALQGFAMEIQDCNSDLVTEVVATSDPEVAFKGADVAVLLGGFPRLPGMERRDLIAKNVPIMAEHGRALAKCAKDGVRVLVVANPACTNCLMVTERKISPVLMNDEAATSAPSIPRSHFSSLARLDQDRLSAMLAENLCSEETLEQTSGGARTPLSGDVSLPQQEPERQHAVRTRQDRNILQLEGPGVRGVYVWGNHSPTMWPDVSGAEAKIDGRWVPLQTALQRDGGLPNGTGLLSPA-REDGTAPDLDSAWHDWISETLVPAVRERGTKVIEARGKSSALSAANAIANHLKDWLHSSTSGTHAGVSMGVFSDGNPYGVPDDVVFSFPVECGEGRHRILNGFRPDMAMLDESAKELLEERREALETLRES 393
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A097IUJ7_SCYLO (Malate dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A097IUJ7_SCYLO) HSP 1 Score: 288 bits (738), Expect = 9.200e-88 Identity = 197/441 (44.67%), Postives = 243/441 (55.10%), Query Frame = 1
Query: 259 ISGKDGVCVAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEKGAALKHEGIRDPAVAT---------DAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWL------SCPAGASGG----VSMGVFSDGNPYGVPDGLVCSFPVEC-GEGRHQILEGF---QPDGAMLEASAQELVDERQEALETLRESGLWTQP*FPRSHARLDRSLGAFTIG 1509
++ K + V +TGGAGQIAY+L+PLI G VFG +V LRLLDI P + AL+GVAMEI DS + ++ VV T D AFEGA VA+LLGGFPR PGMER DLI KNA IM G AL + A +VLVVANPA TNC++ + APSIPR + S L+RLD DR+ ML E + A+ S + W+S +L PT + RG +WGNHS + PD S E RW+P IRD A T DA+ +A L AVR RG V++AR SSA+SAANAIA HL DWL + PA A+ G VSMGV SDGNP+GVP+GL CSFPV C G+G EGF + G L S +EL +E+ L+ L + L P PR A T G
Sbjct: 1 MAAKTALQVVVTGGAGQIAYSLIPLIARGLVFGTDTRVNLRLLDIPPSATALEGVAMEIQDSLFLTVLDGVVATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYAGRNCKVLVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLGEASGSVR-----NGTVDWVSNGGGGSCRRLGPTDI--RGVCVWGNHSNSQVPDASAVEFFVDDRWIPAASV-------IRDAAWLTLSSNSHGRFDADGEAVLG---------LAEAVRGRGAAVLDARKLSSAMSAANAIAGHLSDWLVRPSGSAAPASAAPGAPQIVSMGVASDGNPFGVPEGLFCSFPVRCPGDGDWSFAEGFLLKEEAGHQLSLSVKELQEEKAMVLDALGDGALEQPPPSPRGANAGTADAAAATGG 418
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A097IUM0_9PHAE (Malate dehydrogenase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A097IUM0_9PHAE) HSP 1 Score: 284 bits (726), Expect = 3.970e-86 Identity = 185/407 (45.45%), Postives = 232/407 (57.00%), Query Frame = 1
Query: 283 VAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEK----GAALKHEGIRDPAVATDAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWLSCP----AGASGG----VSMGVFSDGNPYGVPDGLVCSFPVEC-GEGRHQILEGF---QPDGAMLEASAQELVDERQEALETLRESGLWTQP 1452
V +TGGAGQIAY+L+PLI G VFG G +V LRLLDI P + AL+GVAME+ DS YS ++ ++ T D AF+GA VA+LLGGFPR PGMER DLI KNA IM G AL + A+ +V+VVANPA TNC++ + APSIPR + S L+RLD DR++ ML E ++ + T P R+ + L P + RG +WGNHS + PD S E + GRW P+ A L G + D EV L AVR RG V+ AR SSA+SAANAIA+HL DWL P +G+ GG VSMGV SDGNP+GVP+GL CSFPV C G G EGF + G L S +EL +E+ E L + P
Sbjct: 6 VVVTGGAGQIAYSLIPLIARGVVFGPGTRVNLRLLDIPPSAKALEGVAMEVQDSLYSTVLDGLLATTDEARAFDGAQVAILLGGFPRRPGMERGDLIDKNAGIMKRMGEALERHANRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMAGMLLHE-ANRCLSGTPHG----PPTGXXXXXXXRRPL----LGPADI--RGVCVWGNHSNSQVPDASAVEFRVDGRWTPVSSVIRDTAWLNLSGSGHERLDADGEVVLG-----------LTEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVAPVQAGSGSDGGKVAVVSMGVMSDGNPFGVPEGLFCSFPVRCTGNGEWAFDEGFLLKEEAGHQLSLSVEELQEEKAMVAEALGDDACGPSP 390
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A097IUM7_UNDPI (Malate dehydrogenase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUM7_UNDPI) HSP 1 Score: 282 bits (722), Expect = 1.090e-85 Identity = 186/395 (47.09%), Postives = 230/395 (58.23%), Query Frame = 1
Query: 283 VAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIE---KGAALKHEGIRDPAVATDAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWLSCPAGASGG----VSMGVFSDGNPYGVPDGLVCSFPVEC-GEGRHQILEGFQ---PDGAMLEASAQELVDERQEALETLRE 1431
+ +TGGAGQIAY+L+PLI G VFG G +V LRLLDI P + AL GVAMEI DS +S ++ V+ T D AFEGA+VA+LLGGFPR PGMER DLI KNA IM + G+AL + A G +V+VVANPA TNC++ S APSIPR + + L+RLD DR+ ML E A SL + + KL P + RGA +WGNHS + PDVS AE+ G WVP + A L P A E + +L AVR RG V+EAR SSA+SAANAIA HL DWL PA S VSMGV +DGNP+GVP+GL CS PV C G+G E ++ L+AS +EL +E+ E L E
Sbjct: 6 LVVTGGAGQIAYSLIPLIARGLVFGPGVRVHLRLLDIPPAANALDGVAMEIQDSLFSTVLDGVLATTDEGKAFEGAEVAILLGGFPRRPGMERGDLIGKNAGIMKKMGQALERYADHGCKVVVVANPAPTNCVVLSSHAPSIPRKNITCLSRLDHDRMIGMLLAE-------ANRLLSLQDDNSAGGNXXXXXAGARERKLGPADI--RGACVWGNHSNSQVPDVSSAELFIGNMWVPAVFAFRDAHLLGLNAPRPGSAPTGEGEVC----------SLTKAVRGRGAAVLEARKLSSAMSAANAIAGHLSDWL-VPAAVSDSPPTAVSMGVPTDGNPFGVPEGLFCSLPVHCRGDGEWAFAEKYRLPCEGERQLDASIEELREEKAMVSEMLGE 380
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A097IUP6_SACJA (Malate dehydrogenase n=2 Tax=Saccharina TaxID=309357 RepID=A0A097IUP6_SACJA) HSP 1 Score: 281 bits (719), Expect = 2.600e-85 Identity = 190/393 (48.35%), Postives = 233/393 (59.29%), Query Frame = 1
Query: 283 VAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEKGAALKHEGIRDPAVATDAEVDAAKAGWREWVRET--LVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWLSCPA---GASGGVSMGVFSDGNPYGVPDGLVCSFPVECG-EGRHQILEGFQ-PDGA--MLEASAQELVDERQEALETLRE 1431
V +TGGAGQIAY+LVPLI G VFG G +V LRLLDI P + AL+GVAME+ DS +S ++ V+ T D AF+GA VA+LLGGFPR PGMER DLI KNA IM G AL + A +V+VVANPA TNCL+ S APS+ R + S L+RLD DR+ ML E ++ + +A SA A +R +L P V RGA +WGNHS + PD S E G WVP + + G D + +T G R E L AVR RG V+ AR SSA+SAANAIA HL DWL+ A S VSMGV SDGNP+GVP+GL CSFPV CG +G EG++ P+ A LEAS EL +E+ E L E
Sbjct: 6 VVVTGGAGQIAYSLVPLIARGLVFGPGVRVHLRLLDIPPAANALEGVAMEVQDSLFSTVLDGVLATTDEAQAFDGAQVAILLGGFPRRPGMERGDLIGKNASIMKRMGEALERYACHNCKVVVVANPAPTNCLVLSSHAPSLSRRNISCLSRLDHDRMVGMLLHE-ANRSLSAPVSAGGGDAGARGWR-----------RLGPADV--RGACVWGNHSNSQVPDASAVEFLIDGSWVPAV--SVIGDSGWLDLSTSTP-------QGGRVLEGEVSGLAEAVRGRGAAVLGARKLSSAMSAANAIAGHLSDWLAPAAVSVSPSQAVSMGVTSDGNPFGVPEGLFCSFPVHCGGDGEWAFAEGYRLPEEAERQLEASIAELREEKSIVSEMLGE 375
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A097IUP1_9PHAE (Malate dehydrogenase n=1 Tax=Colpomenia sinuosa TaxID=87236 RepID=A0A097IUP1_9PHAE) HSP 1 Score: 278 bits (711), Expect = 6.030e-84 Identity = 189/405 (46.67%), Postives = 227/405 (56.05%), Query Frame = 1
Query: 259 ISGKDGVCVAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEKGAALKHEGIRDPAVAT---------DAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWLSCPA--GASGGVSMGVFSDGNPYGVPDGLVCSFPVEC-GEGRHQILEGF---QPDGAMLEASAQELVDERQEALETL 1425
+S V V +TGGAGQIAY+LVPLI G VFG KV LRLLDI + AL+GVAME+ DS + ++ ++ T D AFEGA VA+LLGGFPR PGMER DLI KNA IM G L K AS +VLVVANPA TNC + + APSIPR + S L+RLD DR+ ML E + AT S S+ +S +L P + RG +WGNHS + PD S E GRW P IRD A T DA+ + L VR RG V+ AR SSA+SAANAIA+HLKDWL P GA VSMGV SDGNP+GVP+GL CSFPV C G+G EGF + G L S +EL +E+ +E L
Sbjct: 1 MSATTAVQVVVTGGAGQIAYSLVPLIARGLVFGPETKVNLRLLDIPHSATALKGVAMEVQDSLFLSVLDGIIATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEDLEKYASRDCKVLVVANPAPTNCCVLASHAPSIPRKNISCLSRLDHDRMVGMLLHEANRCLSVATGSNG-----NGSHGGISNGGGSARRRLGPADI--RGVCVWGNHSNSQVPDASAVEFLVDGRWTPAASV-------IRDAAWLTLSSNSHESFDADGEPVLG---------LAEGVRGRGAAVLGARKLSSAMSAANAIASHLKDWLVQPEAPGAPQVVSMGVASDGNPFGVPEGLFCSFPVRCLGDGDWAFAEGFLLKEEAGHQLSLSVKELQEEKAMVVEAL 382
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A097IUN1_9PHAE (Malate dehydrogenase n=5 Tax=Sargassum TaxID=3015 RepID=A0A097IUN1_9PHAE) HSP 1 Score: 273 bits (698), Expect = 1.950e-82 Identity = 188/393 (47.84%), Postives = 226/393 (57.51%), Query Frame = 1
Query: 283 VAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEKGAALKHEGIRDPA---VATDAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWLSCPAGA-SGGVSMGVFSDGNPYGVPDGLVCSFPVECGEGRH-QILEGFQPDGAM---LEASAQELVDERQEALETLRES 1434
V ITGGAGQIAY+L+PLI G VFG KV LRLLDI P + AL GVAME+ DS +S + V+ T + AF GA VA+LLGGFPR PGMER DLI KNA IM G L AS +V+VVANPA TNC I SI APS+PR + +SL+RLD DR+ ML E +S +A+A+ C R T VRGA +WGNHS + PDVS E GRWVPIE I D +A + G E ++LV AVR RG V+ AR SSA+SAANAIA HL DWLS S VSMGV +DGNP+GV +G+ S PV C G EGF + + LEAS EL DE+ AL+ L ++
Sbjct: 6 VVITGGAGQIAYSLIPLIARGLVFGPDVKVHLRLLDIPPAANALAGVAMEVQDSLFSTALEGVLATTNDVEAFTGAQVAILLGGFPRRPGMERWDLIGKNAGIMKRMGELLETYASPNCKVVVVANPAQTNCYILSIYAPSLPRKNITSLSRLDHDRMIGMLLHEANSRLISASAANGT----ECVRRL--------------TAADVRGACVWGNHSNSQVPDVSAVEFFVDGRWVPIESV-------IPDTTWLGLANSLPGGGSIGGGAEG--QSLVEAVRKRGAAVLGARKLSSAMSAANAIAEHLSDWLSPEKSEHSPAVSMGVTTDGNPFGVSEGIFSSLPVRCTLGGDWNYDEGFSLNDDVRRHLEASVAELEDEKATALKMLEKA 371
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A097IUL1_9PHAE (Malate dehydrogenase n=1 Tax=Scytosiphon dotyi TaxID=180438 RepID=A0A097IUL1_9PHAE) HSP 1 Score: 274 bits (701), Expect = 3.240e-82 Identity = 194/434 (44.70%), Postives = 235/434 (54.15%), Query Frame = 1
Query: 259 ISGKDGVCVAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVA---VRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEKGAALKHEGIRDPAVAT---------DAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWL---SCPA--GASGG----------VSMGVFSDGNPYGVPDGLVCSFPVEC-GEGRHQILEGF---QPDGAMLEASAQELVDERQEALETLRESGLWTQP*FPR 1464
++ K + V +TGGAGQIAY+L+PLI G VFG +V LRLLDI P + AL+GVAMEI DS + ++ V+ T D AFEGA VA+LLGGFPR PGMER DLI KNA IM G AL + AS +V+VVANPA TNC++ + APSIPR + S L+RLD DR+ ML E + A AS S+ L + R+ +RG +WGNHS + PD S E GRW P IRD A T DA+ +A L AVR RG V+ AR SSA+SAANAIA HL DWL S PA G S VSMGV SDGNP+GVP+GL CSFPV C G+G EGF + G L S QEL +E+ L+ L P PR
Sbjct: 1 MAAKTALQVVVTGGAGQIAYSLIPLIARGLVFGAETRVNLRLLDIPPSAMALEGVAMEIQDSLFLTVLDGVIATTDEAKAFEGAQVAILLGGFPRRPGMERGDLIGKNAGIMKRMGEALERYASRNCKVVVVANPAPTNCIVLASHAPSIPRKNISCLSRLDHDRMVGMLLHE--ANRCLAEASGSV------GNGTLGGVSDGXXXXXXXRRLGQADIRGVCVWGNHSNSQVPDASAVEFFVDGRWTPAASV-------IRDAAWLTLSSNAHERFDADGEAVLG---------LAEAVRGRGAAVLGARKLSSAMSAANAIAGHLSDWLVRPSAPAAPGLSAAAXXXXXXXQIVSMGVASDGNPFGVPEGLFCSFPVRCLGDGEWSFAEGFLLKEEAGHQLSLSVQELQEEKAMVLDALGGDASVQPPPSPR 410
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A8K1FKE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKE5_PYTOL) HSP 1 Score: 268 bits (686), Expect = 3.320e-81 Identity = 169/387 (43.67%), Postives = 225/387 (58.14%), Query Frame = 1
Query: 283 VAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDSYSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEKGAALKHEGIRDPAVATDAEVDAAKAGWREWVRETLVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWLSCPAGASGG--VSMGVFSDGNPYGVPDGLVCSFPVEC-GEGRHQILEGFQPDG---AMLEASAQELVDERQEALETL 1425
V ++G AGQIAY+L+PLI +G VFG R+V LRLLDI + AL+GV ME+ D LV V+ T D EVAF+ ADVA+L+GGFPR GMER+DLI KN I G+A+ + AS ++VLVVANPA TNCLIA +APSIPR +FS+L RLD +RL + L E ++ T + + + T VR +WGNHS T PD + E+ G+ P+ + D A W+ + LV V+ RG VI+AR SSA+SAA AI HL+DWL G+ G VSM + S GN YGVP+GL+ SFPV+C G G ++++ G D AM+EA+AQEL +E+ +A+E L
Sbjct: 6 VVVSGAAGQIAYSLLPLICNGLVFGAERRVELRLLDIPMAAEALEGVKMELQDCAYNLVDAVIPTSDLEVAFKDADVAILVGGFPRKQGMERKDLIEKNVTIFKAQGQAIERFASRDIKVLVVANPANTNCLIAMENAPSIPRKNFSALTRLDHERLRSFLVERVNAGFSTQSVTTRI------------------------TSKDVRRCIIWGNHSSTQVPDCTNVEVTVDGKTQPLSTF-------VNDKA----------------WIEDQLVKDVQQRGAAVIKARKLSSAMSAAAAIGAHLRDWLG---GSVQGEYVSMAIPSAGNKYGVPEGLIYSFPVKCLGNGEYEVVNGLPIDERTKAMMEATAQELTEEKNDAVEIL 342
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Match: A0A6H5KVV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV0_9PHAE) HSP 1 Score: 271 bits (693), Expect = 4.020e-81 Identity = 194/447 (43.40%), Postives = 241/447 (53.91%), Query Frame = 1
Query: 283 VAITGGAGQIAYALVPLILHGCVFGEGRKVRLRLLDIEPCSGALQGVAMEIMDS-YSELVTEVVTTCDPEVAFEGADVAVLLGGFPRLPGMERRDLIAKNAPIMAEHGRALAKCASDGVRVLVVANPACTNCLIASISAPSIPRSHFSSLARLDQDRLSAMLAEEFSSEAFTATASASLFLPYACSYRWLSYRQEMMDLKLAPTRVAVRGAYLWGNHSPTMWPDVSRAEIKAGGRWVPIEKGAALKHEGIRDPAVATDAE-VDAAKAGWREWVRET-----LVPAVRDRGTRVIEARGKSSALSAANAIANHLKDWLSCPAGASGG-------------------------VSMGVFSDGNPYGVPDGLVCSFPVEC-GEGRHQILEGF---QPDGAMLEASAQELVDERQEALETLRESGLWTQP*FPRSHARLDRSLG-AFTIGC 1512
V +TGGAGQIAY+L+PLI G VFG +V LRLLDI P + AL+GVAME+ DS +S + V+ T D AF+GA VA+LLGGFPR PGMER DLI KNA IM G L K AS +V+VVANPA TNC++ + APSIPR + S L+RLD DR++ ML E + A A+ + S + S++ +L P V RG +WGNHS + PD S E + G W P PAV DA ++ + + + E L AVR RG V+ AR SSA+SAANAIA+HL DWL P ASG VSMGV SDGNP+GVP GL CSFPV C G+G E F + G L S +EL +ER +E L E G P + + S G A T GC
Sbjct: 10 VVVTGGAGQIAYSLIPLIARGLVFGPRTRVNLRLLDIPPSALALEGVAMEVQDSLFSTALDGVLATTDEAKAFDGAQVAILLGGFPRRPGMERGDLIEKNAGIMKRMGCCLEKYASRNCKVVVVANPAPTNCVVLASYAPSIPRKNISCLSRLDHDRMAGMLLHEANRCLAAAAANGN------GSAKGGSWQ------RLGPADV--RGVCVWGNHSNSQVPDASAVEFRVNGCWTPA-------------PAVIRDASWLNLSNSSHERFDAEGGVVLGLAEAVRGRGAAVLGARKLSSAMSAANAIASHLADWLVPPLPASGRPTASDASXXXXXXXXXXXXXXXXXVVSMGVASDGNPFGVPGGLFCSFPVLCRGDGEWSFAEEFLLKEEAGHQLSLSVKELQEERSMVVEALGEDG-------PSPGSSISPSRGGAATKGC 422 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16009.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig82.16009.1 >prot_C-linearis_contig82.16009.1 ID=prot_C-linearis_contig82.16009.1|Name=mRNA_C-linearis_contig82.16009.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=458bp MTMSPAAWVMRAMALLVVYAVPALADQSQSSPVGFPARSLPNKPSAPAQGback to top mRNA from alignment at C-linearis_contig82:535762..541087- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig82.16009.1 ID=mRNA_C-linearis_contig82.16009.1|Name=mRNA_C-linearis_contig82.16009.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5326bp|location=Sequence derived from alignment at C-linearis_contig82:535762..541087- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig82:535762..541087- >mRNA_C-linearis_contig82.16009.1 ID=mRNA_C-linearis_contig82.16009.1|Name=mRNA_C-linearis_contig82.16009.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2748bp|location=Sequence derived from alignment at C-linearis_contig82:535762..541087- (Chordaria linearis ClinC8C monoicous)back to top |