mRNA_C-linearis_contig81.15969.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: D8LMA5_ECTSI (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA5_ECTSI) HSP 1 Score: 1217 bits (3150), Expect = 0.000e+0 Identity = 709/950 (74.63%), Postives = 757/950 (79.68%), Query Frame = 1
Query: 70 MQESRSKHACCFAVEVFDD-EQFDPSAFVASTRSLVPLERLRDDLQEHLRDRKQELYDLINRDYADFILVSTKLSGVGGKVSHLREPMSRLLARASGLRSSAELEASKLEAKLEERREVRERKTSVHRFLGFMSTLDTAEGVLGIGDRSADRVEDDVDASGGXXXXXXGGDAPEV--AATGRPCWDVDEGDEGFDDPDLLAAFPGGVSIATSE-----------AVAGGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCALLERAAHYALMMNADLQAAAEDEVNGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRQPGQLATSSASASEG-SAG---------------VGVGGARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFASPA--ELEGGAVGGGTAAAGGEXXXXEAQGG-------VDAAAPLPVDLVCNGVWRPVQQLLMTRLSSIFATGMVAAQHTNFVRCMGFLEGLAGIGGDEKRPRIRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNG-------AGSSAGGEDEEEDMAGYEGPAFELRVFRDVWRCLMLCWDDKV----FLPCLSHRFLRLSLQGIGRIGAWAGSKEVLALHPDDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKDLVKETVIEAVGGWGGLMQDLWEKATSQVAAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLGVDVSASLPYERLLEVVE--DPGAPAAAGSSSLR 2763
MQE RSKHACCFAVEVFDD +QFDPSAFVASTRSLVPLERLRDDLQEHL DRKQELYDLINRDYADFILVSTKLSGVG KVSHLREPM+RLLARASGLR SAE EAS+LEAKLEERR VRERK SV RFL FMSTLDTAEGVL IGDR ADR+EDD+D +GG A GR CWDVDE DEGFDDPDLLAAF GG+++ATS+ A +GG XXXXXXXXXXXX CALLERAAHYALMMNADLQAAAEDE NGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPR P S+ +A +G SAG G GGARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDG ERGSSKGLGPLL+ELLAYVKEVAGDAVEAAEDMFASPA +LEG +G E E G VDA APLPVDLVCNGVWRPVQQ+LMTRLSSIFATGMVAAQH+NFV CM FLEGLA I G EKRPRIR RLL QP+V+EFKARWNLPIYFQLRSREISSRLEA L +AAR+RSGSS S A + E+ EE + ++GPAFEL VFR+ WRCL LCW ++V F LSHRFLRLSLQGIGR+GAWAGSKEVL+LHPDDIVPVAADLS+LLGAL++DFVGVAA RISAPAAGERNR G+GALSEKDAK+LV E V+EAVG WGGL+ LWEKATSQVAAQC TILQAVKGITATYRMT+KP PQRPSPFVPNVLRALREFD RWGASA N+ +GG G GWKDRVV SVC+RYL+IVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIM QLR DV EFG+E RLGVDVS+ PYE LLEVVE D A A GS+S R
Sbjct: 1 MQEGRSKHACCFAVEVFDDAQQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRVSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLEIGDRGADRLEDDLDTAGGGGEGGTXXXXXXXXEGARGRACWDVDEDDEGFDDPDLLAAFSGGLALATSDKAVLSAASVPGAASGGG-------VEGDKAXXXXXXXXXXXXCAQEECALLERAAHYALMMNADLQAAAEDEANGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRHPWP---STPAAGDGASAGNKAGXXXXXXXXXXXXGDGGARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGSERGSSKGLGPLLNELLAYVKEVAGDAVEAAEDMFASPAGLDLEGSPLG--------EKDEKEEDGAKTGTVKEVDAMAPLPVDLVCNGVWRPVQQVLMTRLSSIFATGMVAAQHSNFVLCMEFLEGLAAIAGGEKRPRIRHRLLGQPSVAEFKARWNLPIYFQLRSREISSRLEASLKAAARSRSGSSHSXXXXXXXXXXXXAAEAGVQEEHEEALLAFDGPAFELGVFREAWRCLSLCWSNEVGVRYFCRGLSHRFLRLSLQGIGRVGAWAGSKEVLSLHPDDIVPVAADLSKLLGALRSDFVGVAAARISAPAAGERNRAGQGALSEKDAKELVGEVVMEAVGAWGGLVDSLWEKATSQVAAQCNTILQAVKGITATYRMTNKPPPQRPSPFVPNVLRALREFDSRWGASASGNEREGGGGAGWKDRVVMSVCSRYLEIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMMQLRFDVREFGKEAARLGVDVSSFPPYEGLLEVVEAKDADASAVEGSASSR 932
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A6H5JYJ6_9PHAE (Conserved oligomeric Golgi complex subunit 2 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ6_9PHAE) HSP 1 Score: 690 bits (1781), Expect = 1.080e-232 Identity = 418/581 (71.94%), Postives = 440/581 (75.73%), Query Frame = 1
Query: 70 MQESRSKHACCFAVEVFDDEQFDPSAFVASTRSLVPLERLRDDLQEHLRDRKQELYDLINRDYADFILVSTKLSGVGGKVSHLREPMSRLLARASGLRSSAELEASKLEAKLEERREVRERKTSVHRFLGFMSTLDTAEGVLGIGDRSADRVEDDVDASGGXXXXXXGGDAPEV---AATGRPCWDVDEGDEGFDDPDLLAAFPGGVSIATSEA---VAGGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCALLERAAHYALMMNADLQ--------AAAEDEVNGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRQPGQLATSSASASEG-SAG--------------VGVGGARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFASPA--ELEGGAVGGGTAAAGGEXXXXEAQGG-------VDAAAPLPVDLVCNGVWRPVQQ-LLMTRLSSIFATGMVAAQHTNFVRCMGFLEGLAGIGGDEKRPRIRQRLLAQPAVSEFKARWNLPIYFQLR 1695
M E RSKHACCFAVEVFDD QFDPSAFVASTRSLVPLERLRDDLQEHL DRKQELYDLINRDYADFILVSTKLSGVG KVSHLREPM+RLLARASGLR SAE AS+LEAKLEERR VRERK SV RFL FMSTLDTAEGVLGIGD ADR++DD+DA+GGXXXXXX + GR CWDVDE DEGFDDPDLLAAF GG+++ TS+ A P CALLERAAHYALMMNADLQ AAAEDE NGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPR P S+ +A +G SAG GARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDG ERGSSKGLGPLL+ELLAYVKEVAGDAVEAAEDMFASPA +LEG +G E E G VDA APLPVDLVCNGVWRPVQQ +LMTRLSSIFATGMV AQH+NF+ CM FLEGLA I G EKR RIR RLL QP+V+EFKARWNLPIYFQLR
Sbjct: 1 MLEGRSKHACCFAVEVFDDAQFDPSAFVASTRSLVPLERLRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRVSAEEAASRLEAKLEERRIVRERKNSVRRFLRFMSTLDTAEGVLGIGDMGADRLDDDLDAAGGXXXXXXXXXXXXXXXXGSRGRSCWDVDEDDEGFDDPDLLAAFSGGLALTTSDKDVLSAPSVPGAASGGVEGDKTREEEEELRAAASRAQEECALLERAAHYALMMNADLQVGSLLVLVAAAEDEANGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRHPWP---STPAAGDGASAGNXXXXXXXXXXXXXXXXXGARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGSERGSSKGLGPLLNELLAYVKEVAGDAVEAAEDMFASPAGLDLEGSLLG--------EKKENEDDGAKTWTLKEVDAMAPLPVDLVCNGVWRPVQQEVLMTRLSSIFATGMVTAQHSNFMLCMEFLEGLAAIAGSEKRLRIRHRLLGQPSVAEFKARWNLPIYFQLR 570
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A835ZA59_9STRA (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA59_9STRA) HSP 1 Score: 366 bits (940), Expect = 2.000e-106 Identity = 323/885 (36.50%), Postives = 429/885 (48.47%), Query Frame = 1
Query: 151 VASTRSLVPLERLRDDLQEHLRDRKQELYDLINRDYADFILVSTKLSGVGGKVSHLREPMSRLLARASGLRSSAELEASKLEAKLEERREVRERKTSVHRFLGFMSTLDTAEGVLGIGDRSADRVEDDVDASGGXXXXXXGGDAPEVAATGRPCWDVDEGDEGFDDPDLLAAFPGGVSIATSEAVAGGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCALLERAAHYALMMNAD--LQAAAEDEVNGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRQPGQLATSSASASEGSAGVGVGGARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFASPAELEGGAVGGGTAAAGGEXXXXEAQGGVDAAAPLPVDLVCNGVWRPVQQLLMTRLSSIFATGMVAAQHTNFVRCMGFLEGLAGI--GGDEKRPRIRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDEEEDMAGYEGPAFELRVFRDVWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGRIGAWAGSKEVLALH---PDDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKDLVKETVIEAVGGWGGLMQDLWEKATSQVAAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSN-----DGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGP--SDKDKIMKQLRLDVAEFGRETMRLGVDVSASLPYERLL-EVVEDPGAPAAAGSSSL 2760
+A ++ LE+L + L +L K+ LY+LINRDYADFILVSTKLSGV KVS L P+ L ++ LR++ E ++E L ER V+ R+ +V R L F+ +L++AE +LGI +D V + DA+ XXXXX P W +D AF GG A+ + + + XXXXXXXXXXXXXXXXXXXXX C+ LERA+HYALM+NAD + A AE A A L GMS RA+RVEAE+ +RLR+ F L++P G +A L+CLR F+ALG G +AEKQ+A +QPFL+ T G +D G RGS +GL L DE++ YV AV AA FA+ DAA PVDL+ N VW P+Q L+ RL SIFATG+ H N+ LA GG + +QRL A PA ++F+ARWNLP+YFQLR REI++ L+ L + + GG P L WR L CW VFLP L+HR L+L+LQ + R WA +E L+ P+ AADL+ R A A R R L +A W + W +A + VAA+C +LQAV+G+ ATYRMT++P P+RPS FV ++LR LR+FD WGA AP W+ + S+ Y+ ++L R E +L K SD +KI QL+LD E+GRE +GVD+ AS Y+ +L EV + P GSS L
Sbjct: 49 IARAQASASLEQLHEQLDAYLGTLKKNLYELINRDYADFILVSTKLSGVENKVSDLATPIEALCSQIQALRAALSSELDRIEGVLAERTGVQTRRRTVKRCLRFLESLESAEMLLGI----SDAVPEAQDAAAAAXXXXX------XTPAALPSWQLDS-----------TAFAGGDGHASCWSDSDNDXXXXXXXXXXXXXXXXXXXXXXVSRREL--CSNLERASHYALMLNADAGMAATAEPAATTAATDTALQSLAGMSVRAARVEAEVAQRLRAAFGDLVQPXXXXXXXXXXXXXXXXXXXXXXXGLDV---EAFLACLRAFAALGCGRDAEKQYASVAVQPFLDGVLTQGRLDAGARGSCQGLAALYDEIIHYVATACAPAVRAAAATFAA----------------------------ADAA---PVDLLGNAVWAPLQASLVARLPSIFATGLADVFHRNYALSQALPRRLAEACSGGGREGGSAQQRLEAHPASADFRARWNLPVYFQLRQREITAALDEALAA-------------------TDGGAGXXXXXXXXXEPEAALAATAATWRALTRCWHADVFLPPLAHRHLKLTLQLLSRYLGWA--EEALSQRTATPEACAAAAADLAXXXXXXA---------RRGALAELMRQR-----LQSAEAAAXXXXXXXXXXAPWAERAAEAWGRAAAAVAARCCALLQAVRGVAATYRMTNRPPPERPSAFVHSILRPLRDFDAEWGARAPPPLPLPPTSTSXXXLPWRAAALESITEAYVAAARDVLKAARLTEESLKKXXXXXXXXXXXXXXXXAGALSDAEKIALQLQLDAHEYGRELAAMGVDLGASAAYQAMLAEVADAPRGGLGDGSSLL 841
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A7S2UYW1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYW1_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.490e-65 Identity = 156/403 (38.71%), Postives = 215/403 (53.35%), Query Frame = 1
Query: 1540 HTNFVRCMGFLEGLAGIGGDEKRPRIRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDE--EEDMAGYEGPA---FELRVFRDVWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGRIGAWAGSKEVLALHPDDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKD-----LVKETVIEAVGGWGGLMQDLWEKATSQVAAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLGVDVSASLPYERLLEVV 2718
H N+ M FLE LA + G + + +RL + P V EF RWNLPIYFQLR EISSRL+ L R G+ AG+ GG +E AG G F+L V ++ W CL W D VFL L+HRF+ L+LQ + R+ W +E DIV VA D RL ++ G RI+ +G + +G E++ K L E V + ++ LW+ +A QC +LQAV+GITATYRMT+KP+P +PSPFVPN+L+ LR+F + WG P GWK +V+ V RY+++V ELL TV+QME++L KRR +R+ G SD DKI+ QL ++ EFG E G+ + + Y++LLE V
Sbjct: 5 HANYCLSMAFLEKLAHLAGPQHHSAMHRRLQSDPNVQEFLGRWNLPIYFQLRFGEISSRLDKALELTER-------EGLCPEAGAGGGGSTALPQEASAGEVGGGEKKFDLPVLQEAWGCLQYIWGDGVFLAPLTHRFMCLTLQVLQRLSVWV-QQERWKRGSGDIVLVAFDCDRLCHLVRHHLQG----RIAQQVSGSTGKAVQGLGGEEEGKGGEAAALACELVEGGLAPCTEAIRQLWQDLVKDIAQQCAHMLQAVRGITATYRMTNKPAPTKPSPFVPNILKPLRDFSQEWGDRVPEQ------AAGWKHQVLNIVTERYVEVVLELLGTVKQMEDSLKKRRGASRQSK------GGLSDADKILLQLLFNIREFGHELETFGLKLEDNDSYQKLLEQV 383
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: K0TRD9_THAOC (DUF3510 domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TRD9_THAOC) HSP 1 Score: 185 bits (470), Expect = 3.080e-44 Identity = 170/589 (28.86%), Postives = 256/589 (43.46%), Query Frame = 1
Query: 1111 CLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVD-GGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFASPAELEGGAVGGGTAAAGGEXXXXEAQGGVDAAAPLPVDLVCNGVWRPVQQLLMTRLS---SIFATGMVAAQHTNFVRCMGFLEGLAG----------------------IGG-----------DEKRPRIRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDEEEDMAGYEGPAFELRVFRDVWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGRIGAWA---------------------GSKEVLALHP--------DDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSE-KDAKDLVKETVIEAVGGWGGLMQDLWEKA-TSQVAAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLGV 2673
CLR + LG G AE FAR + P + +R + G +D GG RG GL LLD++ VK++ G + + E MFA+ GGG + VDLV GVW PV L+ +IF+ G+ N+ FL LA +G E R ++RL A +++ +WNLPIY+QLR E RL+ LN R G A G + + + + E EL VF +++ L+ W V+L L+HRFLR ++Q +GR+ A+ GS E P DDI VA +L+ L + D++ + P+ E + + SE ++ +D+ ++E+ L+ W K + +QC+ L AVKG+ ATYRMT++P P +PSPFV ++LR L++FD+ + + P GD WK +V+ V ++Y V EL+ TV++ E L R+ R G G SD +K+ QL LD EF +G+
Sbjct: 331 CLRGLALLGKGSHAESAFARVAIMPIIRSRLSMGKLDEGGSRGECAGLFFLLDDIANTVKKMFGPVLRSGEGMFATH--------GGG----------------------MEVDLVTCGVWVPVATALIADPGIKMAIFSPGIANVLQANYSALDTFLSELANSLLSQSASTDREEEKVDREDMELGNFSHLYYRPEIDSEAIERAQRRLYAHSTTADYYKKWNLPIYYQLRFGEFCQRLDKALNRVQR---------DGWHADVFTGSDSDAKKIK--ESLGLELPVFFELYDTLLSMWKSTVYLRPLTHRFLRGAVQLVGRMLAFVRSGLNGEIEFGGTEEKKSEAEGSAETAIDIPAYLWNERVDDIAVVAWELTILDTCMTHDYLQAITSTVC-PSDEESRKATHNSTSEIEEIRDIASSVLMESSTDMYPLVTHSWNKLIVENLTSQCSKPLSAVKGVAATYRMTNRPPPSQPSPFVASILRPLKDFDKTYASRTPPQVGDE-----WKQKVIEEVSSKYSVAVEELIATVKRTEEALKNRKTR-----RMMVG--GMSDNEKVKLQLFLDQREFKSSVEDVGI 865
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A7S1FPS6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FPS6_9STRA) HSP 1 Score: 180 bits (456), Expect = 4.230e-43 Identity = 191/649 (29.43%), Postives = 265/649 (40.83%), Query Frame = 1
Query: 1057 AGVGVGGARES-------RRQALLS----CLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVD-GGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFA------SPAELEGGAVGGGTAAAGGEXXXXEAQGGV--------DAAAPLPVDLVCNGVWRPVQ------QLLMTRLSSIFATGMVAAQHT--------------------NFVRCMGFLEGLAGIGGDEKRPR----IRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDEEEDMAGYEGPAFELRVFRDVWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGRIGAWAGS------------------KEVLALH-----------------PDDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKDLVKETVIEAVGGWGG-LMQDLWEKATSQVAAQ-CTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLGVDVSASLPYERLLEVVED 2724
AGV V +E RRQ +LS CLR + LG G +AE FAR + P + ++ + G +D GG RG GL LLD L + GDA+ +E +P + GGV P+ + + G+ +Q +T LSS +A+ T C F A + E P ++R+ A P ++F +WNLPIY+QLR E SRL ++ R R G A G ++ EE M FEL VF +++ + WD VFL LSHRF+R +LQ GR+ A+ K H P+D VA DL L L F+ + +P N A + + +V+E + E L+ W ++ + CTT L AVKG+ ATYRMT++P P +PSPFV +LR L EFDR +G P G+G WK VV +V +RY V EL+ TVRQME L KR+V +R G +D +K+ QL LD EF GVD +RL E+V+D
Sbjct: 101 AGVNVNDGKEKARKKDKKRRQKILSSLGQCLRGMAVLGRGRDAEDTFARVAIMPLIRSKLSLGKIDEGGPRGRCVGLPSLLDALCIDIAATYGDALALSECTLMCTFDDNTPTQ---------------HSDLDLVTGGVWVPIFTALTVNTPIKMAIFSPGIASILQANYVALNNFLTNLSSSLLQPSHSAKDTIVDDADTDTLDKYDQDDGSDELDDCSDFF--YAHLFQPEITPANVLAAQRRINAHPTTADFLKKWNLPIYYQLRFGESCSRLNVAIS---RVRH------DGWTAACFTGTQESEEAM---RESGFELPVFMELYEIMQRMWDADVFLRPLSHRFMRGTLQLFGRMVAFVSEGLQGKVEFGAPRETSEKEKGTNGQHHTTRGNGAVSVYRWSERPEDAAAVAWDLMVLTSCLTDSFLEKVTDTVVSPDGFVENT----ADETDEIRSIVREAISETCDDDAATLIAKCWSDIIVRILTEECTTPLAAVKGVAATYRMTNRPPPTQPSPFVVTILRPLLEFDRMFGGRCPPQLGEG-----WKIAVVQTVSDRYSASVEELMATVRQMEEALKKRKVR----NRPVGGQSSMADGEKVRLQLLLDYKEFSAVVESAGVDRDQVEGLKRLKELVKD 707
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A7S3V8Q4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8Q4_9STRA) HSP 1 Score: 179 bits (453), Expect = 6.220e-42 Identity = 174/649 (26.81%), Postives = 279/649 (42.99%), Query Frame = 1
Query: 1084 ESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVD-GGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFASPAELEGGAVGGGTAAAGGEXXXXE----------AQGGVDAAAPLP---VDLVCNGVWRPVQQLLMTR---LSSIFATGMVAAQHTNFVRCMGFLEGLA-----------------GI-------GGDEKRPRIRQ-----------------RLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDEEEDMAGYEGPAFELRVFRDVWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGRIGAW-----------------------AGSKEVLALHPD---------------------DIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKDLVKETVIEAVGGWGGLMQDLWEKATSQV-AAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLGVDVSASLPYERLLEVVE 2721
E +R L R F+ LG G +AE FA + P + + + G +D GG RG GL PLL E+++ +K++ GD ++ E +F E+ E + +GG+ + +DLV GVW P+ + LMT ++IF+ G+ + N+ FL L+ G+ GGDE + + + R+ EF +WNLPIY+QLR E+ +RLE + + S + + +G+GS +E + + FEL F +V+ L W +VFL L+HRFLR ++Q +GR+ ++ S+ L D D+ V+ +L+ L LK + V + N G L + L+ E ++EA ++ +W + + A+CT L AVKG+ ATYRMT++P P + SPFV +LR+L+EFD + + PS G WK +V ++ + Y V+EL+ TV++ E L R+V RA AG G SD +K+ QL LD F R +G+D S+ ++L+ + +
Sbjct: 391 EDQRLLLGHLFRSFALLGRGSDAESMFASVAIMPIVRKKISIGKLDEGGSRGECAGLSPLLKEIVSDIKDLWGDVLQLVESIFDMSMEM--------------EHYNKDIHIHYLSTNTTKGGLARTSDSDKSKIDLVTAGVWVPIARALMTDPAIKTAIFSPGIASIFQANYSVLEKFLSQLSFNLLKPSSSESIEEKESGVETADSTFGGDEDKLALTELYYEPDIDTNLIRVAQARIYGHGTTVEFSKKWNLPIYYQLRFGEVCARLEKAIQ---QVESDGWHAEVYSGSGS------DEVVHSLTKNYGFELPFFMEVFDTLRWLWGPEVFLKPLTHRFLRGTIQILGRVISFIKDGLEGKIKFGSEAAPSSSSIDGASESALGTGEDTSLSTTMPKIDRSYCWNERIEDVASVSWELTILETYLKEEHVQNVLKTL--------NSSGPEHLGGDEMSSLIGEVMVEAAQDISPVVDTVWNEIIVNILTAKCTAPLSAVKGVAATYRMTNRPPPTQASPFVGTILRSLQEFDTTFSSRTPSYLGTL-----WKKTIVDTIADLYSTAVAELIETVQRTEEALKNRKVR-----RAAAG--GMSDGEKVRLQLFLDQQAFSRSIEDVGIDPSSIDGMKKLISLTK 996
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A8K1FH08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH08_PYTOL) HSP 1 Score: 173 bits (439), Expect = 6.330e-41 Identity = 206/877 (23.49%), Postives = 335/877 (38.20%), Query Frame = 1
Query: 100 CFAVEVFDDEQFDPSAFVASTRSLVPLERLRDDLQEHLRDRKQELYDLINRDYADFILVSTKLSGVGGKVSHLREPMSRLLARASGLRSSAELEASKLEAKLEERREVRERKTSVHRFLGFMSTLDTAEGVLGIGDRSADRVEDDVDASGGXXXXXXGGDAPEVAATGRPCWDVDEGDEGFDDPDLLAAFPGGVSIATSEAVAGGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCALLERAAHYALMMNADLQAAAEDEVNGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRQPGQLATSSASASEGSAGVGVGGARESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFASPAELEGGAVGGGTAAAGGEXXXXEAQGGVDAAAPLPVDLVCNGVWRPVQQLLMTRLSSIFATGMVAAQHTNFVRCMGFLEGLAGIGGDEKRPRIRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDEEEDMAGYEGPAFELRVFRDVWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGR-IGAWAG-------------SKEVLALH------PDDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKDLVKETVIEAVGGWGGLMQDLWEKATSQVAAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLG 2670
CF V+ F ++F +AF+ R+ P+E + DL+E + +L +IN+DY +F+ +S++L GV V+ +R P+ +L R ++ K+ +++ +E+R+ + + + + E +L I V D D GDA + +P E F VS + E A CA LERA L ++ + E ++ R + +E + RRL +EFA+ + P L LR + L E+ AR ++ PF + T G +DG RGS +GL + +E+L +V + F L QG +A VD++ N VW+P+ ++L T+ + IF T HTN+ MGFL + G E ++ R +V EFK +WN+ +YFQLR ++S+ ++ G DE +E P R +W L CW D+VFL L F++L LQ + + W L+ H DDI+ D L + + V A R+ G+ ++ D + V E E + L W A VA +C +L A++ + Y+MT+K +P PS +V N++R L +F RWG + D + ++ SVC Y + SELL + +++E +L R++ S G SD +K+ QLRLD+ E R + G
Sbjct: 7 CFDVDAFAQDEFSVTAFLEDCRTRSPMETIHQDLKEFQTTLENQLVAIINKDYTEFLQLSSRLKGVDEAVASVRSPLHAILKRVDQVQHVVLKLQQKILGQVQHEQELRKAEQDLELSIQISEKILLLEQLLDIA------VFDSEDE----------GDARVSSRHNQP-----EQXXXXXXXXXXXXFEE-VSRSLKERNAA------------------------------ETCAALERATQLLLQLDLEFLEGVEIPT-----------VQREEKRLAVIEDTLLRRLETEFATEIFPD------------------TFYNRDHSINASTLSYLLRSYVLLQKTHVPEEMIARLLVHPFADENITRGKIDGRVRGSCEGLQSVYEEILEFVS-----------NKFKHILSLS------------------VCQGETKSA----VDILGNAVWKPLFEILSTKHAVIFKTADADRFHTNYTISMGFLTAMEQFCGSEA---MKLRFRTHESVIEFKEKWNMDVYFQLRYNQLSAAVDQSFG----------------------GKRDESIPDLSHE-PVMLFPNTRALWEALSSCWADRVFLDPLLPDFMKLCLQLLVHYVSIWKAPIQEAAEQVGHSVKSSALSTHLACLAVEDDILCAGNDFRVLQKKIVKELFPVMAERL-------------GSFAD-DGAEFVSELYNETLESLSELESICWSAAAFVVAEECKKVLPALRTVKGQYQMTNKSAPTAPSTYVFNIIRPLDDFLERWGCHFAGDRKDE-----FLRSILDSVCELYYSLSSELLKSAQELEESLKSRKMQRNLMS----ASDGLSDTEKMRLQLRLDLEELQRLVQKQG 720
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A7S2EB43_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EB43_TRICV) HSP 1 Score: 166 bits (421), Expect = 1.720e-39 Identity = 172/594 (28.96%), Postives = 253/594 (42.59%), Query Frame = 1
Query: 1111 CLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVD-GGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMF--ASPAELEGGAVGGGTAAAGGEXXXXEAQGGVDAAAPLPVD-LVCNGVWRP-VQQLLMTRLSSI------FATGMV-----AAQHTNFVRCMGFLEGLAGIGGDEKRP-------------RIRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDEEEDMAGYEGPAFELRVFRDVWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGRIGAW----------------------------------AGSKEVLALHP--------DDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKDLVKETVIEAVGGWGGLMQDLWEKATSQV-AAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLGVD 2676
CLR + LG G EAE FAR + P + ++ + G +D GG RG +GL LLD++ A V GD + AE F A + E + GG AA E A V A L D V ++ P + +L +++ A G++ A DE P + R+ P ++F RWNLPIY+QLR + ++RL + + AR RS + + +G G A A E EL +F +++ ++ W V + L+HRFLR ++Q +GR A+ AG+K AL +D+ VA DL+ L + ++ V A S P A R + + L ++ ++EA G L+ W + A+C+ L AV+G+ ATYRMT++P P +PSPFV +LR L EFD + + P SG GWK V+ +V + Y V EL+ TV + E L R+ RA G G SD +K+ QL LD EF R G+D
Sbjct: 3 CLRGLALLGRGREAESAFARVAIMPLVRSKVSLGRLDEGGSRGECRGLKSLLDDVAASVSGAFGDVLRLAECTFDNADADDGESKSEGGVAAAPAAEVDLVTAGVWVPIATALMADPAVKMAIFSPGIASILQANYTTLDAFVSELAAGLLRPSDAGAAXXXXXXXXXXXXXXXXXXXDEYAPLYYRPALSARSVRSAQARIHRHPMTADFNKRWNLPIYYQLRFGDCTARLNSAM---ARTRSEGWEADVFSGGGHGAA-------AALRERTGMELPLFLELYDAMLWLWRPDVAVRPLTHRFLRGAVQLVGRTLAFVKDGLEGKVMFGGADEAMSNGPSSASASADVNGDAGAKITSALDTTYCWGDRIEDVAAVAWDLTVLETCITHEYSDVVACAASPPDALTRPDVHNTDSELDELRSLARDALLEASGDIPPLVDRFWNDVIVGILTARCSAPLSAVRGVAATYRMTNRPPPSQPSPFVSTILRPLTEFDEAFSSRTPPRV----SGTGWKVAVISAVSDAYATSVEELIATVERTEIALKSRKTR-----RAVTG--GMSDGEKVKLQLYLDNLEFARRAEGTGID 575
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Match: A0A3M6VQ47_9STRA (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ47_9STRA) HSP 1 Score: 164 bits (416), Expect = 4.900e-38 Identity = 137/561 (24.42%), Postives = 230/561 (41.00%), Query Frame = 1
Query: 1102 LLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGGERGSSKGLGPLLDELLAYVKEVAGDAVEAAEDMFASPAELEGGAVGGGTAAAGGEXXXXEAQGGVDAAAPLPVDLVCNGVWRPVQQLLMTRLSSIFATGMVAAQHTNFVRCMGFLEGLAGIGGDE---KRPRIRQRLLAQPAVSEFKARWNLPIYFQLRSREISSRLEAGLNSAARARSGSSLSGIGNGAGSSAGGEDEEEDMAGYEGPAFELRVFRD-----------VWRCLMLCWDDKVFLPCLSHRFLRLSLQGIGR-IGAW------------AGSKEVLALHP-------DDIVPVAADLSRLLGALKTDFVGVAAGRISAPAAGERNRGGRGALSEKDAKDLVKETVIEAVGGWGGLMQDLWEKATSQVAAQCTTILQAVKGITATYRMTSKPSPQRPSPFVPNVLRALREFDRRWGASAPSNDGDGGSGGGWKDRVVWSVCNRYLDIVSELLLTVRQMENTLNKRRVTARRGSRAGAGDQGPSDKDKIMKQLRLDVAEFGRETMRLGVDVS 2682
L LR + L E+ R ++QPF E G +DG RGS +GL + + +L ++ FA L QG + + V+++ N +W+P+Q++L T+ IF H ++ M FL + +E K ++ R + +V EFK +WN+ +YFQLR+ +++S +E + ED A + + + D +W+ L CW +++FL L F +LS+Q IG W +G+K + P +D++ +D L + D + + + G ++ D++ V E E + L W A + VAA C +L A + + Y+MT+KP P PS +VP+++R ++EF +WG D +V VC YL + SELL + ++E +L R++ GS + + G SD +K+ QL LD+ E RE LG+DV+
Sbjct: 248 LSYLLRAYVLLDKSHIPEEMIGRLLVQPFAEEHLMRGKLDGRARGSCEGLPQIYESILYFIT-----------SKFAGTLALS------------------VCQGESNCS----VNILGNAIWKPLQEILSTKYGIIFQAADPERFHQSYTISMRFLADI-----EERFCKSEIMKSRFRSHESVVEFKEKWNIDVYFQLRASQLASSVEKSFGL-------------------------KREDSASLDSLYGSVSIVADTSTLGFENSKCLWKALQECWSERIFLAPLLPNFCKLSMQLFAYYIGTWKEPLLNAVRVLNSGTKVDFSSVPLCCLSTEEDLLLAGSDFRVLYKKISQDLLAIVRNHV-------------GDFTD-DSQAFVNELFQEPLASLAELETSCWSAAVTMVAADCKKVLPATRTVKGQYQMTNKPPPTTPSTYVPSIIRPMQEFLEKWGVHF-----DASKRQNLLQAIVEDVCTIYLTLSSELLRSAAELEESLKSRKLQRHSGSHSALANDGVSDTEKMRMQLLLDLEEIQRELTVLGLDVN 726 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig81.15969.1 >prot_C-linearis_contig81.15969.1 ID=prot_C-linearis_contig81.15969.1|Name=mRNA_C-linearis_contig81.15969.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=899bp MQESRSKHACCFAVEVFDDEQFDPSAFVASTRSLVPLERLRDDLQEHLRDback to top mRNA from alignment at C-linearis_contig81:712289..723822+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig81.15969.1 ID=mRNA_C-linearis_contig81.15969.1|Name=mRNA_C-linearis_contig81.15969.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11534bp|location=Sequence derived from alignment at C-linearis_contig81:712289..723822+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig81:712289..723822+ >mRNA_C-linearis_contig81.15969.1 ID=mRNA_C-linearis_contig81.15969.1|Name=mRNA_C-linearis_contig81.15969.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5394bp|location=Sequence derived from alignment at C-linearis_contig81:712289..723822+ (Chordaria linearis ClinC8C monoicous)back to top |