mRNA_C-linearis_contig81.15964.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig81.15964.1
Unique NamemRNA_C-linearis_contig81.15964.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig81contigC-linearis_contig81:630141..640603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons18
Model size2623
Cds size1821
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig81.15964.1prot_C-linearis_contig81.15964.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig81 630291..639951 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930605.253573-UTR-C-linearis_contig81:630140..6302901622930605.253573-UTR-C-linearis_contig81:630140..630290Chordaria linearis ClinC8C monoicousUTRC-linearis_contig81 630141..630290 +
1690881155.9694371-UTR-C-linearis_contig81:630140..6302901690881155.9694371-UTR-C-linearis_contig81:630140..630290Chordaria linearis ClinC8C monoicousUTRC-linearis_contig81 630141..630290 +
1622930605.6250896-UTR-C-linearis_contig81:639951..6406031622930605.6250896-UTR-C-linearis_contig81:639951..640603Chordaria linearis ClinC8C monoicousUTRC-linearis_contig81 639952..640603 +
1690881156.2018034-UTR-C-linearis_contig81:639951..6406031690881156.2018034-UTR-C-linearis_contig81:639951..640603Chordaria linearis ClinC8C monoicousUTRC-linearis_contig81 639952..640603 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930605.2711906-CDS-C-linearis_contig81:630290..6303251622930605.2711906-CDS-C-linearis_contig81:630290..630325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 630291..630325 +
1690881155.9793816-CDS-C-linearis_contig81:630290..6303251690881155.9793816-CDS-C-linearis_contig81:630290..630325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 630291..630325 +
1622930605.2864428-CDS-C-linearis_contig81:630532..6305981622930605.2864428-CDS-C-linearis_contig81:630532..630598Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 630533..630598 +
1690881155.9889252-CDS-C-linearis_contig81:630532..6305981690881155.9889252-CDS-C-linearis_contig81:630532..630598Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 630533..630598 +
1622930605.306732-CDS-C-linearis_contig81:631847..6319391622930605.306732-CDS-C-linearis_contig81:631847..631939Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 631848..631939 +
1690881155.998887-CDS-C-linearis_contig81:631847..6319391690881155.998887-CDS-C-linearis_contig81:631847..631939Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 631848..631939 +
1622930605.3285897-CDS-C-linearis_contig81:632801..6329771622930605.3285897-CDS-C-linearis_contig81:632801..632977Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 632802..632977 +
1690881156.0093331-CDS-C-linearis_contig81:632801..6329771690881156.0093331-CDS-C-linearis_contig81:632801..632977Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 632802..632977 +
1622930605.346092-CDS-C-linearis_contig81:633292..6334131622930605.346092-CDS-C-linearis_contig81:633292..633413Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 633293..633413 +
1690881156.0302954-CDS-C-linearis_contig81:633292..6334131690881156.0302954-CDS-C-linearis_contig81:633292..633413Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 633293..633413 +
1622930605.3578632-CDS-C-linearis_contig81:634003..6340271622930605.3578632-CDS-C-linearis_contig81:634003..634027Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 634004..634027 +
1690881156.0497744-CDS-C-linearis_contig81:634003..6340271690881156.0497744-CDS-C-linearis_contig81:634003..634027Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 634004..634027 +
1622930605.3701077-CDS-C-linearis_contig81:634426..6346021622930605.3701077-CDS-C-linearis_contig81:634426..634602Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 634427..634602 +
1690881156.0650635-CDS-C-linearis_contig81:634426..6346021690881156.0650635-CDS-C-linearis_contig81:634426..634602Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 634427..634602 +
1622930605.3869677-CDS-C-linearis_contig81:634924..6350451622930605.3869677-CDS-C-linearis_contig81:634924..635045Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 634925..635045 +
1690881156.0763793-CDS-C-linearis_contig81:634924..6350451690881156.0763793-CDS-C-linearis_contig81:634924..635045Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 634925..635045 +
1622930605.401109-CDS-C-linearis_contig81:635553..6355771622930605.401109-CDS-C-linearis_contig81:635553..635577Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 635554..635577 +
1690881156.0850875-CDS-C-linearis_contig81:635553..6355771690881156.0850875-CDS-C-linearis_contig81:635553..635577Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 635554..635577 +
1622930605.4189048-CDS-C-linearis_contig81:635946..6361221622930605.4189048-CDS-C-linearis_contig81:635946..636122Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 635947..636122 +
1690881156.0950286-CDS-C-linearis_contig81:635946..6361221690881156.0950286-CDS-C-linearis_contig81:635946..636122Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 635947..636122 +
1622930605.4461544-CDS-C-linearis_contig81:636444..6365651622930605.4461544-CDS-C-linearis_contig81:636444..636565Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 636445..636565 +
1690881156.1062434-CDS-C-linearis_contig81:636444..6365651690881156.1062434-CDS-C-linearis_contig81:636444..636565Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 636445..636565 +
1622930605.4667954-CDS-C-linearis_contig81:637073..6370971622930605.4667954-CDS-C-linearis_contig81:637073..637097Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 637074..637097 +
1690881156.1170802-CDS-C-linearis_contig81:637073..6370971690881156.1170802-CDS-C-linearis_contig81:637073..637097Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 637074..637097 +
1622930605.4854448-CDS-C-linearis_contig81:637466..6376421622930605.4854448-CDS-C-linearis_contig81:637466..637642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 637467..637642 +
1690881156.1317134-CDS-C-linearis_contig81:637466..6376421690881156.1317134-CDS-C-linearis_contig81:637466..637642Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 637467..637642 +
1622930605.518052-CDS-C-linearis_contig81:637960..6380811622930605.518052-CDS-C-linearis_contig81:637960..638081Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 637961..638081 +
1690881156.1422892-CDS-C-linearis_contig81:637960..6380811690881156.1422892-CDS-C-linearis_contig81:637960..638081Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 637961..638081 +
1622930605.5474706-CDS-C-linearis_contig81:638310..6383821622930605.5474706-CDS-C-linearis_contig81:638310..638382Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 638311..638382 +
1690881156.1522756-CDS-C-linearis_contig81:638310..6383821690881156.1522756-CDS-C-linearis_contig81:638310..638382Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 638311..638382 +
1622930605.5717068-CDS-C-linearis_contig81:638669..6387591622930605.5717068-CDS-C-linearis_contig81:638669..638759Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 638670..638759 +
1690881156.1668956-CDS-C-linearis_contig81:638669..6387591690881156.1668956-CDS-C-linearis_contig81:638669..638759Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 638670..638759 +
1622930605.589183-CDS-C-linearis_contig81:639615..6396871622930605.589183-CDS-C-linearis_contig81:639615..639687Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 639616..639687 +
1690881156.180049-CDS-C-linearis_contig81:639615..6396871690881156.180049-CDS-C-linearis_contig81:639615..639687Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 639616..639687 +
1622930605.6072302-CDS-C-linearis_contig81:639817..6399511622930605.6072302-CDS-C-linearis_contig81:639817..639951Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 639818..639951 +
1690881156.1888323-CDS-C-linearis_contig81:639817..6399511690881156.1888323-CDS-C-linearis_contig81:639817..639951Chordaria linearis ClinC8C monoicousCDSC-linearis_contig81 639818..639951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig81.15964.1

>prot_C-linearis_contig81.15964.1 ID=prot_C-linearis_contig81.15964.1|Name=mRNA_C-linearis_contig81.15964.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=607bp
MAKGAAHLVFRSRPGQLAFAAINKARAAVPNSPRGINMVPSRPSRLGWIT
VMLLGQQHGWASGQSTCATIAVSGVGDLDGTYTLDSSKSNPYYFRFGGNT
NYEVYESNDAWWILDDRTEEGYRTLDLPLHPADIVDAWVTCTGSSYLLCT
DDEAPSQPVITCTDPMPEPEPSTCANIAFSGVGDLDGTYELDSSISYPYY
FRYGGNTNYNVYESNGAWWILDTRTEEGLRTLDPAQHPVDIDLQWVDCTG
DSYLLCDYDVGLLQPNITCTDPIPEPEPSTCANIAFSGVGDLDGTYELDS
SISYPYYFRYGGNTNYNVYESNGAWWILDTRTEEGLRTLDPAQHPVDIDL
QWVDCTGDSYLLCDYDVGLLQPNITCTDPIPEPEPSTCASVIVSDLGDLD
GTYDLDSSQSNPFYFRAGGTTTYNIYKSNGAWWMLDDGTNTGYRTLDPAR
HPVDIDLQWVDCTGSSSIYCDYDVALLQPNIICDPTAPTVPPTVSASPAP
TTTAEEAIATHSPSPPSPTLAPENLLTPSPENPLTPSPVDPAPGAAPTET
EPIASPVPATTEDDDVAEGTPAGSTNGDGSSGDDYAMELIIGVASTLASA
AMIGFC*
back to top

mRNA from alignment at C-linearis_contig81:630141..640603+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig81.15964.1 ID=mRNA_C-linearis_contig81.15964.1|Name=mRNA_C-linearis_contig81.15964.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10463bp|location=Sequence derived from alignment at C-linearis_contig81:630141..640603+ (Chordaria linearis ClinC8C monoicous)
GTGAACGATGGGGGGCGAACGCGGTGTATCCAGCTTTGGATCTATCAACA GAAGGAAGAACAGACCAAAGCACGGATGGGCCGAGAACTCATCTTCTGCG GTCTTCTTGCAAAATTACAGCAGGACAGCAGTAGTATGTAGGCGGGATGC ATGGCTAAAGGCGCAGCGCATCTCGTCTTCAGGAGGTAAGAACTGCTGCT GTGTAGAAGAATACATTCCACTCCCATGACACCACGACGGACACCCGATG TGGTCTGAGTGCGGCGGACACTCTCAATATTCCAACTTCCAACATCCCAC GTACGCAGCTCTTCGTTGTGAACAACAGGGGACGCAGAATCTCCCCCTGA ATCTCCTCATCTGCAGTTTTTCAACCGCGCACTCCTCTACAGCCGTCCGG GCCAACTTGCCTTTGCTGCCATCAACAAAGCGCGGGCAGCAGTTCCGAAT TCTCCGCGGTGAGTGAGTCGGTCAAGTTCCGTGGTTTTCGCAGTGAAATG ATGCAGCCTGGAGGAAGTCGCTTTGGTGGGTTTTTCTTGGCTTGGTGGCG CTCTACCGGGGCCTGAACAAGTTTACGGTGCTCTACGTACATTGTGTACA GCAGCATGGATCTAAGAAAGAACCTCCCCGTCAAGAGCCGAGGCTCGAAT GCGGTGGACTAATAGTTTAAGTACAGAGATTTTGATTTTAAAACTGTCAA TCGTTGTTCGCCGGTGTGCCTTCTGCGCGGTGTCGGTGGGGGACGACCCA CCCTTTCTTTGTGGCGCAAAAATCAGCCTACGTCTTTGTTGACTGCAACT GTTGGTTCGGGCATACATACCAAGCGCCGGCAACTTGTAAGCTGTAGTGC AGTGTTCGAAATGCGCAATAATGATGGCAGTCGTTTGGCCACACGCGGAT GAATTTCGATTAGCGACCGCTGCTTCTGACGGCCAGGCCGTGCATGAGCA CGGGACCCGTTGCTGCAGCCCCACCGCGCATGTCCGACTACTGCGCCGTA CCCGTCCAGTTCGGATATCGACCGACAGTCGACCCTGGGGATATCGATCG ACAGCCGACCCTGGGGACTCTATCTGTTCAGAGTTTGCCAGCCTCATGAA AATACAGCTGGCACCAGCAGTTCAGCCTGCCCCTACTATGTAGGCTAGAG CCAAAAAGAAGTATTATGATACTGCATGTTTCGCGAACAGTTTCCACGTG GTGAACATGACTTGTTACGGCAGCGTAGGGGGTGACTACGGTACCCAGAA AATTGAAAGCATATCGATGTACGATATTGACCAACCACCATGAAACAGCA AGTACAAGTGCAATTGAACATGGCTTGCGTTGCGACAGGTGCCGGGAGGT AGAGCCGCATCAAAGCTTATTCCCCATTTCTGCCTCTCTTTGTTGTCTCA CCGCAGCAAGTTGTAGTCTGAGCATGGCTCAGGAGATATTGAAAACATCG TCAGGGGCTCTACGCATACTGGTGAATCGCATGTACCTCGTGAGAGACGA GTTAATTCCAAATGCAGAATGAGATACTACTCTCGGTCGTCTCGTGACAG ATAATTGTACAATATGAGATCGTGGGTGGGGTCCGCTGCAACTCCATGTA TTCATAGACTACGTTGCATTGGAAGACAGCAGTGCGGCATCTCGCCCACC CCTTCGTGATCAACTACTTCAGGTCGGACCGTTCCGTGCGACACGTCCTT CGCGCAGGGGTATCAACATGGTGCCTTCACGGCCTTCTCGTCTCGGATGG ATCACGGTTATGCTCCTAGGCCAGCAGCACGGGTGGGCCTCTGGACAATG TGAGCACGCTCATTAATCCACCGTGCTTGCCTTCAACGATTGAAGACTGC ATCAAATCTATGATCTGCCAGGCATGCGGGACAACGGGTACAACACTCAA TGGGGGGAAATTGCTGTACTTTTGGAGACTTTGTACGACGAAGTGGCATG GCTGTGGATGCTGTTTGGGATCCATAACAACACTCGTTGATGTTCATGAC AGCATGCACACGTGTAGAACTTCTACCATACTATGTTCGCGTTTTGAACC ACGAGTACAAATACCTAGCAAGCATCACATATTTTTCTCTTTTTCACCCC CTGGGAGCGTGTACTGTAGGAGAAAGATCACGGTGCCAACGGGTCGTGAT TGTGGAAAACGATAAGCGCTTCTGCCAAAGATGCCCATCTGAGTTGATCG CGACCTTGAGGCCAGATGCATACGTCGAGAATTGGAAGCAGCTGCAGTTT CGGCAAATGTGACTCACAAATTTCGACTGGGGGTGCTTCGCTAGCTCGAC ATGACCGAAAAGCCGAGACAATCAAAATATCGTGCATGGAACACGCAGTG CGTTACTATATTCGGTGGCGGAAAAGAATACCAGAATATCGCTGGCGGTT TGGTTTCTTCATAGAATAGTTGCAGAATAATAGTGAAAGCACGAGCATTA ATTCGTGGAAGGTGTTGGTGACGGCGGTGTTGGCCAACTCCCCACGACCT GTACGAAACGAGCAATACTTATCCGTTCTACTATCGGTTGTGCGGTCGTC GCAGCGCATCGTCGGTCCAGCCCCAAACGAAAAACTCCATTGCTTGTACG GGAAATGCATTGAAATGTTAACAATTTGCACCTGATTGCTGTCCGAATCC AACTGCTGCAGCTACCTGCGCCACCATCGCTGTGTCTGGTGTTGGGGACC TGGACGGAACGTACACCTTGGACTCCTCCAAGTCTAACCCCTACTACTTC AGGTTCGGGGGGAACACAAACTATGAGGTCTACGAATCTAATGACGCCTG GTGGATTCTGGACGACCGCACCGAGGAAGGCTACAGGGTGAGTCATGCAG TTTGGCGTCCTCCAGCAGTACATGCCTTCATGCCGCCTTGTCTCGAGCTT TGTCCGCTCGTGGTTTGTGGTGCGTCTGAGGCACGGATTTCCGTCACCGT AGCCCACGATAGTGCAACCTTGCGTGATAAAGGGCATGGGAATGATGGTT TGAGAGTCTCTTGCTGGTCAGGACCGTCGGAATCCTCTCCCTCGCGTCGT GCGCGGCAGATGTAAGTGGCGATGTTTAAGATCGGATGATCAGCCAAGTC TGATGCGTTTGGGCGACCCATTCCTTGAGTCTTTCGCTTTTATGCATTGC AGACCTTGGACCTCCCACTGCACCCCGCGGATATAGTTGATGCGTGGGTT ACGTGCACGGGCAGTAGCTATCTCCTCTGCACTGACGACGAGGCCCCCTC ACAACCGGTCATCACCTGCACAGGTGAGGTCAAAAGCGCCTCGATCCGAG GACGCTATGTGGTTGGGAAATGCTTTCTGTCATTTTGTCCATCTACACGA GACCAGAGACTGCGATTCAGGGAGGCCAATGCCAATACATGGCAGCAAAC TTGCTCGGGCGTGTCTCTGGTGTAATCCCCCAAGTGGTCGTGGGTGGATT CCATCGAACCACAAGAAAGTCGCCGTGATTCTCTTGTACGCACGCCAGTG TTTTGTCAGAAACGTGTGTGCATGGATACTTCATGCCCTCCAAGTAGCCT ACCGTACGCTCCTTTGAAAGTGCTCACACCTTGTACATACGACGAGCTTG CCGTGGAGAACCTATACCGCCTACCGGAACCCACGGATGAGCATGAGGGT GGTAGTCGAAGACAGACAAACCTCGGTTGCGATATTGGTTCCCCCCAAGT ATCCTTCAACCACAACAAGTGAATCCTCTCGGCATGAACAGTACGCCTAG AGGTCATCATGTCAAACAGTACGTTTCTGTGTGCAATATTACTTTGGCAC GTGCGATCAAACTTGATAGAAACCAAAACACTCTTCTCGCCTCCGTTTTT GTGATCTTCGCAGATCCCATGCCCGAGCCGGAACCATGTGAGGAAGTCGC GCGAACGAACGTGGATACCCTGAGTGCTTGGTTCAACGCAGCAATTTGAT CGAGTTCAGTCACGGCCTTCGCTGCGTGTTCCTCCTGACGAAGAGAATTC TTGCATCTGCTGCCTTGTGTCTTGGTCTACAGAAGCTCGATTTGCCTATG GACGCATGCATGCGATCGTTTCCATCTCCTGTTGTGAACAATCCATTGGG TTCATCGCGCTCGACCGTTCCCGTTCCTTTCCGTCGGTGGGCGGGCCTAG GATCGTCGAGAAGAATCCACCATTATGCTGTCGCAGTGTAGATTGTTCCG CAGCTCGGTGAGCGTTCCTTCATGTGCACACGATTCTGACCTCATGAAGC ACTCAACCACTACTGCAATGCACGATGTCCTCGCAGCTACCTGCGCCAAC ATTGCCTTTTCTGGCGTCGGGGACCTGGACGGAACGTACGAGCTCGACTC CTCCATCTCGTACCCCTACTACTTCAGGTATGGGGGGAACACAAACTATA ACGTCTACGAATCCAATGGCGCCTGGTGGATTCTGGACACTCGCACCGAG GAAGGCCTCAGGGTGAGTCATTCAGTTTGGAGTCCTCCAGGAGTGCCTGT CTTCGTGCCGCCTTGTCTCGAGCTTTGTCCGCTCGTGGTTTTGTGGTGCG CCTGAAGCACGGGTCTGCGTCATGTTAGCCCACGATAGTGCCACCTTGTG CGATAGACGACATGGGAATCACGGTTTGAGAGTCTTGCTGGTAAGGACCG CCCGACGCCCTTCCCTCCGTTCAGGTGTGGCACATGTAGGTCGCCATATT TCTGATTTCGAAGACGGTTTCGTAAACCGAAGCTGACTTGGGGGGCGGGC CGTTTCTCGTGCCTTTCGTGACTACACATCACAGACCTTGGACCCTGCTC AGCACCCTGTGGACATTGACCTGCAGTGGGTCGACTGCACGGGCGACAGC TACCTCTTGTGCGACTACGACGTCGGGTTGTTGCAGCCAAACATTACCTG CACAGGTGAGATGGACAGCGCCGTTTCATCGGAGAAAACACCGTGATGGG TCGGTAGCCTCGGCTTCCTTCTTCTTCTTTGAACCATAAGAAGAATTCGA TGCACGGAGCCCAAACCCCAAACATGGTTAAAAAAATTCTCTTCGCTGCC CGCAACGTAGCACCGCCCACGCCTCCTCGAGCACGGCTTCCATCTAGCCG CACACGGAAGTGGGTATGATCATCTCTCGTACGCACCCCAGTGTTGCAAC CGAACCGTACGTGCATGATACTTCATGTGCTGAAAAGTAGCTTACCGCGT GGGTGTACGATGCGCTTGATGTGGAGAAGGATAGCGTATCTACCGGTTCC CATACGAGAAGCTATCGGAAGAGGACAAGGGTCACTGTTGATACCTTGAC GCAGGTCATCCATGCCAAACAGTACGTAATCTTGTACGCGATATTGCTTG GCACATACGAACCAGCTGCGCGCACCAACCCTCGTCTCGCCTCCGTTCTT GTGATCTTCGCAGACCCGATCCCCGAGCCGGAACCATGTGAGGATTTCGC GCGAACGTGAACGCCCTGCTTCGCTGTAGCAAAGACGAACATCCGAAGTC ACGGCCTTCGCTGCGTGTTCCTCCCGACGCGGCAGCATTTTTCTCTGGAG TTTGTTGTTCGACGTGTAGTGTGCGTATGTATGTAGCCGTTTCCATCTCC CTCGCCATGACCAATCCATTGGGTTCATCGCGCTCGACCGTTCCCTTTCC TTCCCGTCGGTGGGCGGGCCTAGGATCGTCGACAAGAATCCACCATTATG CTGTCGCAGTGTAGATTGTTCCGCAGCTCGGTGAGCGTTCCTTCATGTTT AGGCGATAACCTCACAAAGCACTCAACCACTACTGCAATGCACGATGTCC TCGCAGCTACCTGCGCCAACATTGCCTTTTCTGGCGTCGGGGACCTGGAC GGAACGTACGAGCTCGACTCCTCCATCTCGTACCCCTACTACTTCAGGTA TGGGGGGAACACAAACTATAACGTCTACGAATCCAATGGCGCCTGGTGGA TTCTGGACACTCGCACCGAGGAAGGCCTCAGGGTGAGTCATTCAGTTTGG AGTCCTCCAGCAGTGCCTGTCTTCGTGCCGCCTTGTCTCGAGCTTTGTCC GCTCGTGGTTTTGTGGTGCGCCTGAAGCACGGGTCTGCGTCATGTTAGCC CACGATAGTGCCACCTTGTGCGATAGACGACATGGGAATCACGGTTTGAG AGTCTTGCTGGTAAGGACCGCCCGACGCCCTTCCCTCCGTTCAGGTGTGG CACATGTAGGTCGCCATATTTCTGATTTCGAAGACGGTTTCGTAAACCGA AGCTGACTTGGGGGGCGGGCCGTTTCTCGTGCCTTTCGTGACTACACATC ACAGACCTTGGACCCTGCTCAGCACCCTGTGGACATTGACCTGCAGTGGG TCGACTGCACGGGCGACAGCTACCTCTTGTGCGACTACGACGTCGGGTTG TTGCAGCCAAACATTACCTGCACAGGTGAGATGGACAGCGCCGTTTCATC GGAGAAAACACCGTGATGGGTCGGTAGCCTCGGCTTCCTTCTTCTTCTTT GAACCATAAGAAGAATTCGATGCACGGAGCCCAAACCCCAAACATGGTTA AAAAAATTCTCTTCGCTGCCCGCAACGTAGCACCGCCCACGCCTCCTCGA GCACGGCTTCCATCTAGCCGCACACGGAAGTGGGTATGATCATCTCTCGT ACGCACCCCAGTGTTGCAACCGAACCGTACGTGCATGATACTTCATGTGC TGAAAAGTAGCTTACCGCGTGGGTGTACGATGCGCTTGATGTGGAGAAGG ATAGCGTATCTACCGGTTCCCATACGAGAAGCTATCGGAAGAGGACAAGG GTCACTGTTGATACCTTGACGCAGGTCATCCATGCCAAACAGTACGTAAT CTTGTACGCGATATTGCTTGGCACATACGAACCAGCTGCGCGCACCAACC CTCGTCTCGCCTCCGTTCTTGTGATCTTCGCAGACCCGATCCCCGAGCCG GAACCATGTGAGGATTTCGCGCGAACGTGAACGCCCTCCTTCGCTGTAGC AAAGACGAACATCCGAAGTCACGGCCTTCGCTGCGTGTTCCTCCCGACGC GGCAGCATTTTTCTCTGGAGTTTGTTGTTCGACGTGTAGTGTGCGTATGT ATGTAGCCGTTTCCATCTCCCTCGCCATGACCAATCCATTGGGTTCATCG CGCTCGACCGTTCCCTTTCCTTCCCGTCGGTGGGCGGGCCTAGGATCGTC GACAAGAATCCACCATTATGCTGTCGCAGTGTAGATTGTTCCGCAGCTCG GTTAGCGTTCCTTCATGTTTAGGCGATAACCTCACAAAGCACTCAACCAC TACTGCAATGCACGATGTCCTCGCAGCTACCTGCGCCAGCGTCATTGTGT CCGACCTTGGGGACCTGGACGGAACGTACGACCTGGACTCCTCTCAATCC AACCCCTTCTACTTCAGGGCCGGGGGCACCACCACCTACAACATATACAA GTCGAATGGCGCCTGGTGGATGCTCGACGATGGCACCAACACTGGCTACA GGGTGAGCCATGAATTTGGTGCGCTGCTATAGCTTCCTTCGCGCCGCCTT GTCCCGAGCTTTGTCCGGTCGTGCTTTGCAGCGCGGCTGAGGCCTGGGTC CCTCGTGATCCACGATTAGCGACCTCGTACATATGATTAGACACATGGAA ACTAACGTTTGTTCGTCTCTGCTAGGGCCGCCCGAAACTCGTCACTCGCC CCCCTTCCGGCGAGGTGGACTTGGCGGACGACAAAGCGAGATGCGTTCAC CATTTCGAAGCTGACCGGTATGGGCGGGTCGTTCCTCCTCGTGTCTTCCG TGTCTACTTTCCTTTCACAGACCTTGGACCCTGCTCGGCACCCGGTGGAC ATTGACCTGCAGTGGGTCGACTGCACGGGCAGCAGCTCCATCTACTGCGA CTACGATGTAGCGTTGTTACAACCAAACATCATTTGCGACCGTGAGAGCG AAAATTTCCTGATTTGATATCCCTTCGGTTGGTAGCACTGTCAACGTTTT TTTTAGTGCTCACAAGCCAACGACCCCCACGACAGCATCTTTTGCTCTCA ATCGCAACGTAAGTACACGTCGCCAACGGCAGGAATAGAGGCTTCAGAAC TTTTGAGACGCTTGCGAAATGTGATGCCCATTGTTGACGCGCGTATCCCA TCTTGTTTCCACTCGACCAGCTACGGCGCCTACAGTCCCCCCGACCGTTA GTGCCAGCCCCGCGCCAACCACAACCGCCGAAGAAGCTATTGGTGAGCTA GGGATGATTCAACGCACCTTCCGGTACTTGCAGAAATGAGGCGAAGACTA TCAAATTGTTCAACCAGATATGGACGATGCCGCTTTGGGGCGATCGACAA AATGAGCGTTGCTTACAGTGTGCACGCCGTTCCTTCCATTAATTTCTGAG GGGGTGGCTTGGGCATGGTAGAGATGCCTCGTTAGGCGCACAGAACGTCG TTTTCGCGGGACGTTAGAGCGCTTACTCCAGCCGCTTTCGTTTCCGGCCT CTCCCGCGTTTCAAATGGCGGAGGAGCAGCCACGCATTCGCCGTCTCCGC CGTCTCCGACGCTAGCACCAGAAAACCTTCTGACGCCATCCCCAGAAAAC CCTCTAACGCCATCCCCAGGTACGCGTTGTTGTGAGAGGCACAGTAGACG GGCCTGCCAAGCAGATTAGTGGCGTCGCCCCATATTCGGACAGTTGGTGA TGTTTGGTAGTAAATCCTTCAACTCGCCCCCATATTCTGTGGAATCGCCC CAACAGAACCCTCCTCTACGGAAGTTGTTGACTGGCTCGGGTATTGCATA AAATCCCAACCATCCATGTGCAAGTCTCCTCTCATCCTGTCTTCGTAAGC CACAGCTCGCAAGGCAAATCTCTCCAACACCAACCGCATTCCCATCAGAG TTGAGGGACATGTATGGTAGACAGTGGTTTGAGGGCTATTCCGCTGGTGT GTCATGTATTATTACGCAGCATCCACGAGCGGTCTGAGAAGGGTTCCAAG TATGAGCATGCACTTCCATAGTCATTGCCAGAACACGGCAGCAATTGTCA CGAGTTCGAGTATTGCAGTGCGTACATTCGAATGAATGGTCCATACACAC ACATCTGTTCGACGGCGAAAACACAATCCACTGGTGGTGCGCTCCATGTT CTACCTTGATTTGAGATGCGTAGTGCGGTTGTCTACGAAACAATCTTCCT CCTCCACTCGACAGATGCCAGACGCTACTATATCGTAACTCCGTATTATA TACCTTTCGGAGAATCATCGCGATGGGTGCGGGCGTCAGAATCTTGGTCA TTTGGGCCACCGATGATATCTGTCATGTCGTTAGGGTCCCACGCCTTAGC GGACTATAATGAAGTCTTCGACCTTCCCCGCCCTCGACGTTCCTCCCGAT CCCTTACCGCGTCACATCCGCAAATACGGCGACCCTAACACGCCGCCACT GCCGATGCCGCTTCCACACGTGCAGTCGATCCTGCGCCTGGTGCGGCCCC GACTGAAACTGAGCCTATTGCGTCCCCGGTGCCTGCTACTACGGAAGGTA CGCTTCCGTTCACGGTAGTATTAAGCTCCTAAATCAGTATTAAGCTCTGT AATATATCACTGTGCTAATCTGTAATCATCAACAATACAAAACGGGGATT ATCTTACGCCAACGTTGTCTCTTGCAGACGACGACGTCGCGGAGGGCACA CCGGCCGGCAGTACCAACGGCGACGGCTCCAGCGGTGACGACTACGCAAT GGAATTGATCATCGGAGTTGCTTCAACGTTGGCCAGCGCGGCGATGATTG GCTTTTGCTAGACAGATGCCGAACTCGAACGACGCACACAAAGATAGTTT GAACGCCACCATTAGGCTTCTTCTCCATCGCTTGGCCTTCACGAGCTTTT GTTCGTTTTTGTTCTTAAGGAGGGGACCTACTGATATGGTGCTTCGCCGC CGCTGAGGGCCAGCGATTTATGGTGGAGACTGGTCGAAAATGTGTCGATA GGAAAGGGGTGGGAGGGAACGACCTCCAGGACAAGACAATGTTGTGTGTT TTGTGTTTTTGTCACATATATTGGTAACGGTCCCTGTCCGATCAAGGCGA GACGTGTACTACACATTGCTATGTCACTAGAGTACTACACTTGTTGTTTT TTCTGTACAACTAGAACCAACCGGGGTCACATAGGGTTGCGAGAAAAATG GGAACGGATTTTGAATTGAGAATGAGAAACCCTTGATTTTCGTTCGAGAT AATTGGATTTAGTATTCTTCGAACCCACTTTCGATCCCTAACTTTGTGCG GGAAGAGTTGAGGTAGGTGATGGCGAGCGACATCACATAACTAACCTCCT TTACCGTTGCAACCCTCAGCATTGACTTCGTGAACAGCACGAAGCAGGCG AGGTAATCGACGCCCCGAAAATGAGACGATCATCATGCTGAGGAAATATA TACTCCGTAAATT
back to top

Coding sequence (CDS) from alignment at C-linearis_contig81:630141..640603+

>mRNA_C-linearis_contig81.15964.1 ID=mRNA_C-linearis_contig81.15964.1|Name=mRNA_C-linearis_contig81.15964.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3642bp|location=Sequence derived from alignment at C-linearis_contig81:630141..640603+ (Chordaria linearis ClinC8C monoicous)
ATGGCTAAAGGCGCAGCGCATCTCGTCTTCAGGAGATGGCTAAAGGCGCA
GCGCATCTCGTCTTCAGGAGCCGTCCGGGCCAACTTGCCTTTGCTGCCAT
CAACAAAGCGCGGGCAGCAGTTCCGAATTCTCCGCGCCGTCCGGGCCAAC
TTGCCTTTGCTGCCATCAACAAAGCGCGGGCAGCAGTTCCGAATTCTCCG
CGGGGTATCAACATGGTGCCTTCACGGCCTTCTCGTCTCGGATGGATCAC
GGTTATGCTCCTAGGCCAGCAGCACGGGTGGGCCTCTGGACAATGGGTAT
CAACATGGTGCCTTCACGGCCTTCTCGTCTCGGATGGATCACGGTTATGC
TCCTAGGCCAGCAGCACGGGTGGGCCTCTGGACAATCTACCTGCGCCACC
ATCGCTGTGTCTGGTGTTGGGGACCTGGACGGAACGTACACCTTGGACTC
CTCCAAGTCTAACCCCTACTACTTCAGGTTCGGGGGGAACACAAACTATG
AGGTCTACGAATCTAATGACGCCTGGTGGATTCTGGACGACCGCACCGAG
GAAGGCTACAGGCTACCTGCGCCACCATCGCTGTGTCTGGTGTTGGGGAC
CTGGACGGAACGTACACCTTGGACTCCTCCAAGTCTAACCCCTACTACTT
CAGGTTCGGGGGGAACACAAACTATGAGGTCTACGAATCTAATGACGCCT
GGTGGATTCTGGACGACCGCACCGAGGAAGGCTACAGGACCTTGGACCTC
CCACTGCACCCCGCGGATATAGTTGATGCGTGGGTTACGTGCACGGGCAG
TAGCTATCTCCTCTGCACTGACGACGAGGCCCCCTCACAACCGGTCATCA
CCTGCACAGACCTTGGACCTCCCACTGCACCCCGCGGATATAGTTGATGC
GTGGGTTACGTGCACGGGCAGTAGCTATCTCCTCTGCACTGACGACGAGG
CCCCCTCACAACCGGTCATCACCTGCACAGATCCCATGCCCGAGCCGGAA
CCATATCCCATGCCCGAGCCGGAACCATCTACCTGCGCCAACATTGCCTT
TTCTGGCGTCGGGGACCTGGACGGAACGTACGAGCTCGACTCCTCCATCT
CGTACCCCTACTACTTCAGGTATGGGGGGAACACAAACTATAACGTCTAC
GAATCCAATGGCGCCTGGTGGATTCTGGACACTCGCACCGAGGAAGGCCT
CAGGCTACCTGCGCCAACATTGCCTTTTCTGGCGTCGGGGACCTGGACGG
AACGTACGAGCTCGACTCCTCCATCTCGTACCCCTACTACTTCAGGTATG
GGGGGAACACAAACTATAACGTCTACGAATCCAATGGCGCCTGGTGGATT
CTGGACACTCGCACCGAGGAAGGCCTCAGGACCTTGGACCCTGCTCAGCA
CCCTGTGGACATTGACCTGCAGTGGGTCGACTGCACGGGCGACAGCTACC
TCTTGTGCGACTACGACGTCGGGTTGTTGCAGCCAAACATTACCTGCACA
GACCTTGGACCCTGCTCAGCACCCTGTGGACATTGACCTGCAGTGGGTCG
ACTGCACGGGCGACAGCTACCTCTTGTGCGACTACGACGTCGGGTTGTTG
CAGCCAAACATTACCTGCACAGACCCGATCCCCGAGCCGGAACCATACCC
GATCCCCGAGCCGGAACCATCTACCTGCGCCAACATTGCCTTTTCTGGCG
TCGGGGACCTGGACGGAACGTACGAGCTCGACTCCTCCATCTCGTACCCC
TACTACTTCAGGTATGGGGGGAACACAAACTATAACGTCTACGAATCCAA
TGGCGCCTGGTGGATTCTGGACACTCGCACCGAGGAAGGCCTCAGGCTAC
CTGCGCCAACATTGCCTTTTCTGGCGTCGGGGACCTGGACGGAACGTACG
AGCTCGACTCCTCCATCTCGTACCCCTACTACTTCAGGTATGGGGGGAAC
ACAAACTATAACGTCTACGAATCCAATGGCGCCTGGTGGATTCTGGACAC
TCGCACCGAGGAAGGCCTCAGGACCTTGGACCCTGCTCAGCACCCTGTGG
ACATTGACCTGCAGTGGGTCGACTGCACGGGCGACAGCTACCTCTTGTGC
GACTACGACGTCGGGTTGTTGCAGCCAAACATTACCTGCACAGACCTTGG
ACCCTGCTCAGCACCCTGTGGACATTGACCTGCAGTGGGTCGACTGCACG
GGCGACAGCTACCTCTTGTGCGACTACGACGTCGGGTTGTTGCAGCCAAA
CATTACCTGCACAGACCCGATCCCCGAGCCGGAACCATACCCGATCCCCG
AGCCGGAACCATCTACCTGCGCCAGCGTCATTGTGTCCGACCTTGGGGAC
CTGGACGGAACGTACGACCTGGACTCCTCTCAATCCAACCCCTTCTACTT
CAGGGCCGGGGGCACCACCACCTACAACATATACAAGTCGAATGGCGCCT
GGTGGATGCTCGACGATGGCACCAACACTGGCTACAGGCTACCTGCGCCA
GCGTCATTGTGTCCGACCTTGGGGACCTGGACGGAACGTACGACCTGGAC
TCCTCTCAATCCAACCCCTTCTACTTCAGGGCCGGGGGCACCACCACCTA
CAACATATACAAGTCGAATGGCGCCTGGTGGATGCTCGACGATGGCACCA
ACACTGGCTACAGGACCTTGGACCCTGCTCGGCACCCGGTGGACATTGAC
CTGCAGTGGGTCGACTGCACGGGCAGCAGCTCCATCTACTGCGACTACGA
TGTAGCGTTGTTACAACCAAACATCATTTGCGACCACCTTGGACCCTGCT
CGGCACCCGGTGGACATTGACCTGCAGTGGGTCGACTGCACGGGCAGCAG
CTCCATCTACTGCGACTACGATGTAGCGTTGTTACAACCAAACATCATTT
GCGACCCTACGGCGCCTACAGTCCCCCCGACCGTTAGTGCCAGCCCCGCG
CCAACCACAACCGCCGAAGAAGCTATTGCTACGGCGCCTACAGTCCCCCC
GACCGTTAGTGCCAGCCCCGCGCCAACCACAACCGCCGAAGAAGCTATTG
CCACGCATTCGCCGTCTCCGCCGTCTCCGACGCTAGCACCAGAAAACCTT
CTGACGCCATCCCCAGAAAACCCTCTAACGCCATCCCCAGCCACGCATTC
GCCGTCTCCGCCGTCTCCGACGCTAGCACCAGAAAACCTTCTGACGCCAT
CCCCAGAAAACCCTCTAACGCCATCCCCAGTCGATCCTGCGCCTGGTGCG
GCCCCGACTGAAACTGAGCCTATTGCGTCCCCGGTGCCTGCTACTACGGA
AGTCGATCCTGCGCCTGGTGCGGCCCCGACTGAAACTGAGCCTATTGCGT
CCCCGGTGCCTGCTACTACGGAAGACGACGACGTCGCGGAGGGCACACCG
GCCGGCAGTACCAACGGCGACGGCTCCAGCGGTGACGACTACGCAATGGA
ATTGATCATCGGAGTTGCTTCAACGTTGGCCAGCGCGGCGATGATTGGCT
TTTGCTAGACGACGACGTCGCGGAGGGCACACCGGCCGGCAGTACCAACG
GCGACGGCTCCAGCGGTGACGACTACGCAATGGAATTGATCATCGGAGTT
GCTTCAACGTTGGCCAGCGCGGCGATGATTGGCTTTTGCTAG
back to top