mRNA_C-linearis_contig80.15919.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI) HSP 1 Score: 636 bits (1640), Expect = 3.310e-224 Identity = 350/418 (83.73%), Postives = 367/418 (87.80%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQAQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSERAEKRXXXXXXXXXXXXXXXXXXXXXKADTAKAEAEATEVGGEKKEEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEELDDTPPMYRQARALFLKPEVEPAGEFKLKWTDPDEAGLIKFLVEDKG 1296
MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQ+QMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKND+D+FSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSG++QPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALAL+RQHGTIEEIIKHLDA KYP+PDDWLEP+ERAE+R XXXXXXXXXXXXXXXXXXXX A+TA EA +E ++KE D E+E+DDTPPMYRQAR LFLKPEVEPAGE+KLKWTDPDE GLIKFLVE+KG
Sbjct: 1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWLEPAERAERRKXXXXXXXXXXXXXXXXXXXXXAETANPEA-VSEEDVQQKEGDSDSDKAKADTPDHGVSVAKEAADVSAKRERETEDAAESEQEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKG 417
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA) HSP 1 Score: 414 bits (1065), Expect = 3.740e-137 Identity = 268/416 (64.42%), Postives = 311/416 (74.76%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QAQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSERAEKRXXXXXXXXXXXXXXXXXXXXXKADTAKAEAEATEVGGEKKEEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEELDDTPPMYRQARALFLKPEVEPAGEFKLKWTDPDEAGLIKFLVE 1287
MGI GLTKLL+DE PNC+KE DL+SLTGRK+A+DASMAMYQFLIAVRSG EG A MLTNEAGEVTSHIQGMFNRTI++L+ G+KP Y+FDGKPP LKGGELAKR AKR KAE + + A E D+D+FSKRLVRVT HNEDCK LL LMGVPVV A EAEAQCAALAR+GVV+GT TEDMDALTF+TPKL+RR+T + +QPI+EVDY +L+GL L+HE+FVD+C+LCGCDYT SI+GIGPKKAL LI++H +IEEI+KHLD +K+ +P DW+ P E XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX E D PMY++AR LFL+P+V PA + LKWTDP+ L FLVE
Sbjct: 1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGELAKRAAKRVKAETDWQDARENGTTEDVDKFSKRLVRVTTQHNEDCKTLLRLMGVPVVDASCEAEAQCAALARDGVVFGTGTEDMDALTFRTPKLIRRLT-TNKNQPIMEVDYAGVLEGLGLTHEEFVDMCILCGCDYTDSIRGIGPKKALMLIKKHHSIEEILKHLDRSKHGIPADWI-PGETPTPLAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXPPAAPVVQEAVPADKIPMYKEARRLFLEPDVFPANTYDLKWTDPNVEELTTFLVE 401
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA) HSP 1 Score: 396 bits (1018), Expect = 4.660e-130 Identity = 235/426 (55.16%), Postives = 285/426 (66.90%), Query Frame = 1
Query: 40 GMGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQA--QMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSER----AEKRXXXXXXXXXXXXXXXXXXXXXKADTAKAEAEATEVGGEKKEEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEELDDTPPMYRQARALFLKPEVEPAGEFKLKWTDPDEAGLIKFLVEDKG 1296
GMGIHGL L++DEAP KE D+ +L GRKVA+DASMA+YQFLIAVRS A QMLTNEAGEVTSHIQG+FNRTIRML+ GVKPCY+FDGKPP LK GELAKRT R KA+ ELK A E +D DID++SKRLV+VTR+HNED K+LL LMGVPV+ AP EAEAQCAALA+ G+V+ TATEDMDALTFQTP LL+RMTFS Q PI+++ + KLL GL ++ E+FVDLC+LCGCDY GIGPK AL L+R++G +E I+K+LD K+PLP W P+ + A XXXXXXXXXXXXXXXX + + E +A E + + A E+ P++ + R LF P V+ LKWT+PDE GLIKFLVE+KG
Sbjct: 21 GMGIHGLMNLVADEAPESCKEQDIKALVGRKVAIDASMALYQFLIAVRSAEHAGAVTQMLTNEAGEVTSHIQGLFNRTIRMLTNGVKPCYVFDGKPPTLKSGELAKRTKARTKAKEELKAAEEREDAEDIDKYSKRLVKVTREHNEDAKRLLRLMGVPVIEAPGEAEAQCAALAKAGLVWATATEDMDALTFQTPHLLKRMTFSAKQQAPIMQISHDKLLHGLGITQEQFVDLCILCGCDYCDRPSGIGPKTALKLVRKYGNLENIVKNLDKKKHPLPVGWERPAPKPADPAPAAXXXXXXXXXXXXXXXXSEGGSEVTHEENETDAQEPDAKPEPAAS-------------------------------AETAQEPEKEQPWEPLFVEVRQLFHTPLVQDPVNCSLKWTEPDEEGLIKFLVEEKG 415
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: A0A7R9UCR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCR1_9STRA) HSP 1 Score: 372 bits (956), Expect = 9.400e-123 Identity = 185/286 (64.69%), Postives = 229/286 (80.07%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QAQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGAS-QPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSERA 894
MGI GLTKLL+DEAP C+KE +L S TGRKVA+DASMA+YQF+IA+RSG EG AQ+LTNE GE+TSHIQG+FNRTIRML+ G+KP Y+FDGKPP LK GELAKR A+R +A+++L+ A +DK +++ KRL RVTR H+ED KLL LMGVPVV AP EAEAQCA LAR G V+ T TEDMDAL F+TPKLLRR+TF A+ QP++EVDYQK + GL L++E+FVDLC+LCGCDYT +IKGIGPK AL L+R HG+I +++ LD KY +P W++ S A
Sbjct: 1 MGIKGLTKLLNDEAPGCIKEAELSSYTGRKVAIDASMALYQFIIAIRSGSEGFAAQVLTNEQGEITSHIQGIFNRTIRMLTNGIKPVYVFDGKPPTLKSGELAKRMARRQEAQSKLEAAESVEDK---EKYGKRLTRVTRKHSEDAMKLLRLMGVPVVQAPCEAEAQCAELARAGKVWATGTEDMDALCFRTPKLLRRLTFGAANKQPVMEVDYQKAIDGLGLTYEQFVDLCILCGCDYTDTIKGIGPKTALKLVRTHGSIANVVRSLDKKKYQVPAGWIKGSNPA 283
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: A0A6T7HKT1_9STRA (Flap endonuclease 1 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HKT1_9STRA) HSP 1 Score: 358 bits (918), Expect = 2.210e-115 Identity = 183/291 (62.89%), Postives = 222/291 (76.29%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQ---AQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQPILE-VDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSERAEKR 903
MGI GL KLLSDEAP C++EV L SL GRK+A+DASMA+YQFLIAVRS G A MLTN GE TSHIQG+FNRTIR LS+G++P Y+FDGKPP LK GEL KR KR KA+ LK A E + + D+ SKRLVR NEDC +LL+LMGVPVV AP EAEAQ +ALAR G VY TATEDMDALTF+TP LLR+MTF+ AS+ ++ +DY+K L+GL+L+H++FVDLC+L GCDY SIKG+GPK AL LIR+H IE I+KH+D NKY +PD W+ RA ++
Sbjct: 1 MGIKGLAKLLSDEAPECVREVPLSSLQGRKIAIDASMAIYQFLIAVRSSGNNPNMAAAMLTNAEGETTSHIQGLFNRTIRFLSEGIRPVYVFDGKPPNLKSGELVKRREKREKAQTALKNAQEDGNVEEQDKQSKRLVRAGTKENEDCIRLLNLMGVPVVRAPCEAEAQASALARAGTVYATATEDMDALTFRTPILLRKMTFANASKSDIQTMDYKKALEGLDLNHDQFVDLCILLGCDYCDSIKGVGPKTALKLIREHSDIETILKHIDRNKYTIPDAWIPNEARASEK 291
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: A0A1Z5K7Q2_FISSO (Flap endonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7Q2_FISSO) HSP 1 Score: 356 bits (914), Expect = 2.520e-115 Identity = 177/289 (61.25%), Postives = 228/289 (78.89%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRS--GGEGQAQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQPILE-VDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSERAEK 900
MGI GL KL+SDEAP+ ++EV+L SL GRK+A+DASMA+YQFLIAVRS GG+GQ+ MLTN GE TSHIQGMFNRTIR +++G+KP ++FDGKPP++K GEL KR KR KA+ L+VATE + + D+ SKRLVR + N+DC+KLL LMGVPVV AP EAEAQ AALA+ G+VY TEDMDALTFQTP L+R+MTF+ AS+ +++ ++Y K L+G+ L+ +FVDLC++ GCDY +IKG+GPK AL LIR+HG IE I+KHLD KY +P+ WL P + AE+
Sbjct: 1 MGIKGLAKLISDEAPDAIREVELKSLHGRKIAIDASMAIYQFLIAVRSNNGGQGQSFMLTNAEGETTSHIQGMFNRTIRYMTEGIKPVFVFDGKPPEVKSGELLKRREKREKAQLALQVATEEGNVEEQDKHSKRLVRAGQKENDDCQKLLRLMGVPVVLAPCEAEAQAAALAKAGLVYAAGTEDMDALTFQTPVLVRKMTFASASKSMVQTMNYAKALEGMNLTQAQFVDLCIMLGCDYCDTIKGVGPKTALKLIREHGCIENILKHLDGKKYVVPESWLPPPKEAEE 289
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: W7U4Z8_9STRA (Flap endonuclease 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4Z8_9STRA) HSP 1 Score: 356 bits (914), Expect = 1.460e-114 Identity = 204/424 (48.11%), Postives = 261/424 (61.56%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQA-QMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSERAEKRXXXXXXXXXXXXXXXXXXXXXKAD-----TAKAEAEATEVGGEKKEEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEELDDTPPMYRQARALFLKPEVEPAGEFKLKWTDPDEAGLIKFLVEDKG 1296
MGI GLTKL++DEAP +KE ++ GR VAVDASMA+YQFLIA+R G G A LTNEAGEVTSHIQG+FNRTIRML+ G+KP ++FDGKPP LKGGEL KR KR KAE+ELK A E + + DR SKRLVR + + DCKKLL LMGVP + AP EAEAQCAALA+ G VY ATED D LTF TP+LLR MT +G PI E+DY+K+L+GL L+H +F+DLC+L GCDYT +I+GIGPK AL LI+++G IE +++++ KY +P +WL P + K D TA+ +++A + GEK+E E E+ + P Y ARALF++PE+ E KW +P+EAGL FL++ G
Sbjct: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAG-DNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWL-PRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAG-MEGEKEE-------------------GIKAAAIVAREVAPDEPAKSVEGEVMEMP-AYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLG 401
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: A0A1V9YW30_9STRA (Flap endonuclease 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YW30_9STRA) HSP 1 Score: 351 bits (901), Expect = 1.440e-113 Identity = 179/286 (62.59%), Postives = 221/286 (77.27%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEG--QAQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYP-----LPDDWL 876
MGI GL KLL+DEAP C+KE+ + L+GR VA+DASMA+YQFLIAVRS G+G AQMLTNEAGEVTSHIQGMFNRTIR++ GVKP Y+FDGKPP +K GELAKRT +R +A+A LK ATE + DID+F+KRLVR T HNEDCK+LL LMG+P +TAP EAEA CAALA+ G V+ TEDMD +TF TP L RR+T + + + PILE+ +K+LQ L L++E+FVDLC+LCGCDY +I GIGPKKAL IR+H +IE + HL+ K+P +P DWL
Sbjct: 1 MGIKGLMKLLTDEAPTCVKELQMAQLSGRSVAIDASMALYQFLIAVRSNGDGGGTAQMLTNEAGEVTSHIQGMFNRTIRLMENGVKPVYVFDGKPPVMKSGELAKRTERRQEAQASLKTATEEGNTEDIDKFTKRLVRATPQHNEDCKELLGLMGIPFLTAPCEAEATCAALAKAGKVFAAGTEDMDVITFGTPVLFRRLTIAASRKLPILEIRLEKVLQELNLTYEQFVDLCILCGCDYCETIFGIGPKKALNAIREHKSIENFLAHLE--KHPSKGVTVPHDWL 284
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: FEN1A_DANRE (Flap endonuclease 1 n=37 Tax=Osteoglossocephalai TaxID=1489341 RepID=FEN1A_DANRE) HSP 1 Score: 350 bits (897), Expect = 3.400e-113 Identity = 196/441 (44.44%), Postives = 249/441 (56.46%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQAQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANKYPLPDDWLEPSERAEKRXXXXXXXXXXXXXXXXXXXXXKADTAKAEAEATEVGGEKKEEAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEELDDTPPMYRQARALFLKPEVEPAGEFKLKWTDPDEAGLIKFLVEDK---------GCVLQPGSESGQRQ 1335
MGIHGL KL++D AP+ +KE ++ S GRK+A+DASM +YQFLIAVR G +L NE GE TSH+ GMF RTIRML G+KP Y+FDGKPPQLK GEL KR +RA+AE L A EA ++ +ID+FSKRLV+VT+ HNE+CKKLLSLMGVP + AP EAEA CAAL + G VY TATEDMD LTF T LLR +T S A + PI E + ++LQ +EL+H++F+DLC+L GCDY G+IKGIGPK+A+ LI+QHG+IEEI++++D NK+P P+DWL Y++AR LFL+PEV LKW +PDE GLI+F+ +K GC S G Q
Sbjct: 1 MGIHGLAKLIADHAPSAIKEHEIKSYFGRKIAIDASMCIYQFLIAVRQDGN----VLQNEDGETTSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLLAQAQEAGEQENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDMDGLTFGTTVLLRHLTASEAKKLPIQEFHFSRILQDMELTHQQFIDLCILLGCDYCGTIKGIGPKRAIDLIKQHGSIEEILENIDPNKHPAPEDWL----------------------------------------------------------------------------------------------------YKEARGLFLEPEVVDGTSVDLKWNEPDEDGLIQFMCAEKQFSEDRIRNGCKKITKSRQGSTQ 337
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA) HSP 1 Score: 350 bits (898), Expect = 4.060e-113 Identity = 174/284 (61.27%), Postives = 218/284 (76.76%), Query Frame = 1
Query: 43 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQAQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDIDRFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGASQ-PILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALIRQHGTIEEIIKHLDANK---YPLPDDWL 876
MGI GL KLL+DEAP C+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE G AQMLTNEAGEVTSHIQGMFNRTIR++ G+KP Y+FDGKPP +K GELAKR+ +R A+ LK ATE + DID+F+KRLVR T HNEDCK+LL LMGVP + AP EAEA CAALA+ V+ + TEDMD +TF TP L RR+T + + + PILE+ K+LQ LEL+HE+FVDLC+LCGCDY +I+GIGPKKAL+ I++H IE + HL + +PD+WL
Sbjct: 1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGELAKRSERRQTAQENLKTATEEGNVEDIDKFNKRLVRATPQHNEDCKELLQLMGVPFINAPCEAEATCAALAKSNKVFASGTEDMDVMTFGTPVLFRRLTIAASRKLPILEIRLDKVLQELELTHEQFVDLCILCGCDYCDTIRGIGPKKALSAIKEHKNIETFVAHLQQHPSKGITVPDEWL 284 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig80.15919.1 >prot_C-linearis_contig80.15919.1 ID=prot_C-linearis_contig80.15919.1|Name=mRNA_C-linearis_contig80.15919.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=488bp MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGback to top mRNA from alignment at C-linearis_contig80:726378..729604- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig80.15919.1 ID=mRNA_C-linearis_contig80.15919.1|Name=mRNA_C-linearis_contig80.15919.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3227bp|location=Sequence derived from alignment at C-linearis_contig80:726378..729604- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig80:726378..729604- >mRNA_C-linearis_contig80.15919.1 ID=mRNA_C-linearis_contig80.15919.1|Name=mRNA_C-linearis_contig80.15919.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2928bp|location=Sequence derived from alignment at C-linearis_contig80:726378..729604- (Chordaria linearis ClinC8C monoicous)back to top |