mRNA_C-linearis_contig80.15907.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 1314 bits (3401), Expect = 0.000e+0 Identity = 634/698 (90.83%), Postives = 657/698 (94.13%), Query Frame = 1
Query: 1 MLRRHFKRRNYFAAATAR-RAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEEYIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEE----EKSDGDTRSFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRTWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHPPAPHRITHFVRPARTIQKCHVPGLVQDLLARDLGSP 2079
MLR+H+K+RNY+AAATA R +YRWCYAEQVDQAAPLPDRSNGWRY GPR+GETYRRQAVFGAGFRLRLPFPRL GPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSR RRIDVNQHGIP SL DLQVRAGV SEDPRFRQL+IASFGHRLV+YDPLTEFG+ WKERLP ACLAVLVADSWRDCQ+GLL RDRRRFGFRDVDPLTGAFMDSR GGRSKKGVKRAPPNAL GGNYFRNLYSIMLERDVG EF+AWLSGEE +PAVTVRHL+KWLKTTKASVVVWSHRGSGAEVVG KGQTT+LRPRALHVGVREGHVYRLVLDGPWKDRFT AREGAVGPSL VAVEHCV TRRLFRRIAEAAEE EKSDGDTR+FGRCADMT AIL SSQT+ DQQTARKRRRG DDKADSKKTWYAPPGTALDELMLHLHLGGVAC GRLTSYSHWDSLSLPAHGII+RTWCGASMGGLDPD LECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAML M NLPAFTHMDEVQ FDGH IEDWTLYVVRL+A GDPDVFLNADVTPVFGRNY+RYLAL+ PAPHR++HFVRPARTIQKCH+P LVQDLLARDLG P
Sbjct: 1 MLRQHYKKRNYYAAATALPRPEYRWCYAEQVDQAAPLPDRSNGWRYLGPREGETYRRQAVFGAGFRLRLPFPRLCPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRGRRIDVNQHGIPTSLVDLQVRAGVISEDPRFRQLNIASFGHRLVRYDPLTEFGVIWKERLPGACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMDSRAGGRSKKGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHRVSHFVRPARTIQKCHIPRLVQDLLARDLGEP 698
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: A0A6H5KBM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM1_9PHAE) HSP 1 Score: 1073 bits (2776), Expect = 0.000e+0 Identity = 542/688 (78.78%), Postives = 572/688 (83.14%), Query Frame = 2
Query: 2213 GGKVVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARCRYEHFFSGELKTPGTLKFEPALKNAASPDRVFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKNFDTMGAAHAAWRSVGKDDKRKMWLDICAAESPANLEQLLRQLISQEGRVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWIVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYTSIHALSMILAAAHSNGVHVMGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLLARKRDRTIDEQVEMDDSLLYILDAGDNSAVAQTRALERFGGIEPTRYGPRVSDFHLAYTRDCARFHAFRGLTRCNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLNRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSVSDMSEHARRSWATRKVWSYLRADVKAGRLDNGEGGQHKGALIEQLLRCYGGRCNSCSIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLRCNRARGGLGRGLSKKKEEEN 4276
GGK+VP+LGEVNRIKSELRKNGTDGELGIEKLDSGDAYL FEASRV RNMLEACGGSAFSYQCDAVF RG PEVQ EAR RYEHFFSGELKTPGTLKFEPALKNAAS DRVF GIE +N TMGAAH AWRSVGKDDKRKMW DIC+AESPA+LEQLLR+L+SQE RVVCAVTG+HGGAGKS+C AAKAVF+T LVLTPTNSLRTS+TDLPPGW V+TADHQLGFYIGDD VRKT GSIHIPRVDVV IEEAAY S+HALSMILAAAHS GVHV+GTY+THQLQP RE SG+SISVDNVDRQ+VLER+FP CFHL ARKR RTIDEQVE+DDSLLYILDA +NSA AQ RALERFG I P P VSDFHLAYTRDC RFHA RGLTRCNEAGGWDALGQ GVVGAQYRDLGK GKVHKNHAY IVRSSDDSVVV+S FD GATLEET L+RAAA+ILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGP NV +LDDIHRSVSDMSEHARRSWATRKV SYLRADV GRLD GEG QH AL + LL YGGRCNSC+IELVWAVYSERQPTLDRLDCALPHTPGNVDVKCL+CNRARGGLGRGL+KKK++EN
Sbjct: 457 GGKIVPILGEVNRIKSELRKNGTDGELGIEKLDSGDAYLSFEASRV------------------------RNMLEACGGSAFSYQCDAVFLRGLPEVQAEARHRYEHFFSGELKTPGTLKFEPALKNAASSDRVFAGIE---------------------------------ENLGTMGAAHVAWRSVGKDDKRKMWPDICSAESPASLEQLLRELMSQEDRVVCAVTGKHGGAGKSYCTLHAAKAVFETDLVLTPTNSLRTSHTDLPPGWSVKTADHQLGFYIGDDTRVRKTVGSIHIPRVDVVKIEEAAYMSLHALSMILAAAHSKGVHVIGTYETHQLQPAREGSGLSISVDNVDRQVVLERSFPICFHLFARKRVRTIDEQVEVDDSLLYILDAANNSAKAQIRALERFGEIGPAGCDPHVSDFHLAYTRDCPRFHAVRGLTRCNEAGGWDALGQSGVVGAQYRDLGKVGKVHKNHAYHIVRSSDDSVVVQSTFDGGATLEETILSRAAADILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPLNVVILDDIHRSVSDMSEHARRSWATRKVSSYLRADVTGGRLDEGEGNQHNNALAQALLNSYGGRCNSCTIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLKCNRARGGLGRGLAKKKKDEN 1087
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE) HSP 1 Score: 1071 bits (2770), Expect = 0.000e+0 Identity = 542/694 (78.10%), Postives = 572/694 (82.42%), Query Frame = 1
Query: 10 RHFKRRNYFAAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEEYIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEE----EKSDGDTRSFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRTWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHPPAPHRITHFVRPARTIQKCHVPGLVQDLLARDLGSP 2079
RH+K+R+Y+AAATARR +YRWC EQVD+A P+ RSNGWRY GPR+GETYRRQAVFGAGFRL LPFPRLP GPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVH DADAWRAAFVDVEG GHGQLVVSAADETWRVILCWGSR RRIDVNQH IP SL DLQVRAGVTSEDPRFRQL+IA FGHRLV++DP+TEFG+TW ER P A LAVLVADSWRDCQI LL RD+RRF F D L+G VKRA PNAL GGNYF NLYS +LERDVG EF+AWL GEE PAVTVRHLEKWLKTTKASVVVWSHRGSGAEV GPK Q T+LRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHC TRRLFRR+AEAAEE EKSDGDTR+FGRCADMT AILA+ QTE DQQT RKRRRGVDDKADSK+TW LTSYSH DSLSLPAHGIIVRTW GASM GLDPD LECDEATRLIELHGTLGRKLI GVMDFRVSSEYSPSLLALLEVCWRGPI GAEDA GTTYGPGDWQCDINGAHTAAM M NLPAFTHMD+ QAFDGH IEDWTL VVRL+AGGDPDVF RYLAL+ PA +R+THFVRPART +KCH+P LVQD+LARDLG P
Sbjct: 3 RHYKKRHYYAAATARRPEYRWCGVEQVDEAVPMSTRSNGWRYLGPREGETYRRQAVFGAGFRLHLPFPRLPPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGSGHGQLVVSAADETWRVILCWGSRGRRIDVNQHSIPTSLVDLQVRAGVTSEDPRFRQLNIACFGHRLVRHDPVTEFGVTWTERSPGAYLAVLVADSWRDCQIDLLERDQRRFAF---DLLSG--------------VKRAAPNALDGGNYFCNLYSKILERDVGLTEFSAWLLGEECTPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVRGPKDQPTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMTQAILATGQTETDQQTTRKRRRGVDDKADSKETW-------------------------LTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIELHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDALGTTYGPGDWQCDINGAHTAAMPSMENLPAFTHMDDGQAFDGHDIEDWTLCVVRLEAGGDPDVF--------------RYLALIQTPALNRVTHFVRPARTDRKCHIPELVQDVLARDLGEP 640
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 989 bits (2558), Expect = 0.000e+0 Identity = 488/687 (71.03%), Postives = 559/687 (81.37%), Query Frame = 2
Query: 2213 GGKVVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARCRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKNFDTMGAAHAAWRSVGKDDKRKMWLDICAAESPANLEQLLRQLISQEG-RVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWIVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYTSIHALSMILAAAHSNGVHVMGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLLARKRDRTIDEQVEMDDSLLYILDAGDNSAVAQTRALERFGGIEPTRYGPRVSDFHLAYTRDCARFHAFRGLTRCNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLNRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSVSDMSEHARRSWATRKVWSYLRADVKAGRLDNGEGGQHKGALIEQLLRCYGGRCNSCSIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLRCNRARGGLGRGLSKKKE 4267
GGKVVPVL EV+R K+ELR GELGIE L +GDAYLCF+A R WYRDGFWALG LILDETRLRVLE RN LE+CG S FSYQCDAVFFRGP V+EE R + H FSG+ KTPGTLKFEPALKN +R VF GIEVKL LD LPPAMR IPCP + L+V+PLWGG+G F +MG AH AW S+ K KR +W +IC AESP+ LE LLR L+SQ+ RVVCAVTGEHGGAGKS+CAFRAAK +FKTGLV+TPTNSLRTS+TD+P GW V+TADHQLGFY+G+D+ +RKTAGSI +VDV+IIEEAAY + LSMILAAA +G HV+GTYDTHQLQPV ESSGMSIS DNVDR+++LE+AFPTCFH+ ARKRD+T +EQVEMDD LLYIL AG+NS AQTRA+ERFG PT P S+FHLAYTRDCARFHAFRGL CN GGWDALG+ V+GAQYRDLG GK+HKNH Y IVRSS D +VV SAFD +LEET+L RA AE LFDPPGSCTVHAVQGRTV+G+L+IHQARHR +DV+WLYTA+SRATGPSNV V+DD HR S+MS+ R SW +RKV SY+ AD+ +GRL + EGGQH+ AL ++L R Y G CN C ELVWAVYSERQPTLDRLDCALPHT GNVDVKCL+CNRARG LGRG SKK++
Sbjct: 542 GGKVVPVLCEVDRAKAELRTG--QGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCGASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKKTPGTLKFEPALKNPLCGERRVFEGIEVKLSLDTLPPAMRQIPCPPKPHLQVIPLWGGVGAGFSSMGDAHNAWCSLEKSTKRNLWPEICEAESPSKLESLLRGLLSQQASRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEIVVASAFDCAVSLEETSLCRAVAENLFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVWVIDDAHRRDSNMSDRERASWVSRKVSSYIYADIASGRLGSDEGGQHREALAQELHRAYRGTCNLCHHELVWAVYSERQPTLDRLDCALPHTIGNVDVKCLKCNRARGSLGRGKSKKRK 1226
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE) HSP 1 Score: 986 bits (2550), Expect = 0.000e+0 Identity = 481/687 (70.01%), Postives = 566/687 (82.39%), Query Frame = 2
Query: 2213 GGKVVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARCRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKNFDTMGAAHAAWRSVGKDDKRKMWLDICAAESPANLEQLLRQLISQEGR-VVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWIVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYTSIHALSMILAAAHSNGVHVMGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLLARKRDRTIDEQVEMDDSLLYILDAGDNSAVAQTRALERFGGIEPTRYGPRVSDFHLAYTRDCARFHAFRGLTRCNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLNRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSVSDMSEHARRSWATRKVWSYLRADVKAGRLDNGEGGQHKGALIEQLLRCYGGRCNSCSIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLRCNRARGGLGRGLSKKKE 4267
GGK+VPVL EV+R+K+ELR G+LGI+ L +GDAYLCF+A R WYRDGFWALG +ILDETRLRVLE RN LE CG S +S+QCDAVFFRG VQE R R+ FSG KTPGTLKFEPALKN +R VF GI VKL LD LPPAMR IPCP + L V+PLW GIG +F +M AH+AWR +GK+ KR MW +IC AESP+ LE LR ++S++G +VCAVTGEHGGAGKS+CAF AAK +FKTGLV+TPTNSLRTS+T+LP GW V+TADHQLGFY+GDD+HV+KTAGSI +VDV+IIEEAAY + LSM+LAAAHS+G HV+GTYDTHQLQPV ESSGMSIS DNV+R+++LE+AFPTCFH+ ARKRD+T+DEQVEMDD LL+IL AG++S AQTRA+ERFGG P SDFHLAYTRDCARF+AFRGL CNE+GGWD LG + VVGAQYRDLG GKVHKNH Y ++RSS ++VVV SAFDDGA+LEET+L RA AE +FDPPGSCTVHAVQGRTV+G+L+IHQARH ++DVYW+YTAISRATGPSNV V+DDI+RS SDMS+ R SW +RKV SY+ ADV A RL + EGGQH+ AL+++L R YGGRCN C+ EL+W VYSERQPTLDRLDCALPHT GNVDVKCL+CNRARG LGRG SKK++
Sbjct: 135 GGKIVPVLCEVDRVKAELRTG--QGDLGIDSLHTGDAYLCFDAERTWYRDGFWALGAIILDETRLRVLETRNALELCGASEYSFQCDAVFFRGSSSVQENMRLRFNQLFSGNEKTPGTLKFEPALKNPLCGERRVFEGIVVKLSLDALPPAMRKIPCPLKPRLLVIPLWDGIGTDFSSMEEAHSAWRRLGKNTKRNMWPEICEAESPSKLEIFLRGMLSRQGSSIVCAVTGEHGGAGKSYCAFNAAKNIFKTGLVVTPTNSLRTSFTNLPSGWNVKTADHQLGFYLGDDSHVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKVILEKAFPTCFHVFARKRDKTVDEQVEMDDGLLHILAAGNDSHEAQTRAIERFGG--GCLDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNPGKVHKNHMYNVIRSSAETVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVIDDIYRSKSDMSDRERASWVSRKVSSYIYADVAAERLGSDEGGQHREALVQELHRSYGGRCNLCNHELIWTVYSERQPTLDRLDCALPHTIGNVDVKCLKCNRARGSLGRGKSKKRK 817
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 967 bits (2501), Expect = 0.000e+0 Identity = 477/688 (69.33%), Postives = 557/688 (80.96%), Query Frame = 2
Query: 2213 GGKVVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARCRYEHFFSG-ELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKNFDTMGAAHAAWRSVGKDDKRKMWLDICAAESPANLEQLLRQLISQEG-RVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWIVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYTSIHALSMILAAAHSNGVHVMGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLLARKRDRTIDEQVEMDDSLLYILDAGDNSAVAQTRALERFGGIEPTRYGPRVSDFHLAYTRDCARFHAFRGLTRCNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLNRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSVSDMSEHARRSWATRKVWSYLRADVKAGRLDNGEGGQHKGALIEQLLRCYGGRCNSCSIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLRCNRARGGLGRGLSKKKE 4267
GGK+VPVLGEV+R+K+ELR G+LGIE L +GDAYLC +A R WYRDGFWALG LILDETRLRVLE RN LE+CG FSYQCDAVFFRG VQE+ R R+ F G E KTPGTL+FEPALKN +R VFGGI+ K+ LD LPPAMR I CP + +RV+PLW GIG F +M H AWRS+ ++ KR +W +IC AESP+NLE L+R + Q+G R+VCAVTGEHGGAGKS+CA RAA A+FKTGLV+TPTNSLRTS+TD+P GW V+TADHQLGFY+GDD+ +RKTAGSI VDV+IIEEAAY + LSMILAAAH +G HV+GTYDTHQLQPV +SSG SIS DNVDR+++LE+AFP CFH+ ARKRD+T++EQVEMDD LLYIL AGD+S AQTRA+ERFGG P SDFHLAYTRDCARFHAFRGL C+EAGGWD LG++ VVGAQYRDLG GKVHKNH Y+I+RSS D VVV SAFD +LEET+L RA AE LFDPPGSCTVHAVQGRTV+G L+IHQARHR +DV+WLYTA+SRATGPS+V V+DDIHRS SDMS+ R SW +RKV SY+ ADV AGRL EG +H+ AL+++LL YGGRC+ C+ ELVWAVYSE+QPTLDRLDC+LPHT NVDVKCLRCNRARG LGRG +KKK+
Sbjct: 734 GGKIVPVLGEVDRVKAELRTG--QGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCGACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGDETKTPGTLRFEPALKNPLGDERRVFGGIKTKISLDALPPAMRRILCPPKHRMRVIPLWDGIGGGFSSMDHVHDAWRSLERNAKRNLWPEICEAESPSNLESLIRAHMLQQGSRLVCAVTGEHGGAGKSYCATRAATAIFKTGLVVTPTNSLRTSFTDMPCGWSVKTADHQLGFYLGDDSEMRKTAGSIRTLNVDVIIIEEAAYMPLRTLSMILAAAHCSGTHVIGTYDTHQLQPVCDSSGRSISKDNVDRRVILEKAFPLCFHVFARKRDKTVEEQVEMDDGLLYILAAGDDSHEAQTRAIERFGG--GCLDNPSPSDFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGKVHKNHTYKIIRSSADEVVVASAFDGAVSLEETSLCRAEAENLFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSSVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRLGPEEGRRHREALVQELLNSYGGRCHRCTCELVWAVYSEQQPTLDRLDCSLPHTAENVDVKCLRCNRARGSLGRGRTKKKK 1417
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 932 bits (2410), Expect = 1.020e-315 Identity = 464/684 (67.84%), Postives = 543/684 (79.39%), Query Frame = 2
Query: 2222 VVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARCRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKNFDTMGAAHAAWRSVGKDDKRKMWLDICAAESPANLEQLLRQLISQEG-RVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWIVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYTSIHALSMILAAAHSNGVHVMGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLLARKRDRTIDEQVEMDDSLLYILDAGDNSAVAQTRALERFGGIEPTRYGPRVSDFHLAYTRDCARFHAFRGLTRCNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLNRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSVSDMSEHARRSWATRKVWSYLRADVKAGRLDNGEGGQHKGALIEQLLRCYGGRCNSCSIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLRCNRARGGLGRGLSKKKE 4267
VPV G ++ ++ N D L I KLD+ R WYRDGFWALG LILDETRLRVLE RN LE CG S FS+QCDAVFFRG VQE+ R R+ FSG KTPGTLKFEPALKN +R VF GI VKL LD LPPAMR IPCP + L V+PLW G+G F +M AH+AWR +GK+ KR MW +IC AESP+ LE LLR +S++G R+VCAVTGEHGGAGKS+CAF AAK +FKTGLV+TPTNSLRTS+T+LP GW V+TADHQLGFY+GDD+HV+KTAGSI +VDV+IIEEAAY + LSM+LAAAHS+G HV+GTYDTHQLQPV ESSGMSIS DNV+R+ +LE+AFPTCFH+ ARKRD+T+DEQVEMDD LL+IL AG++S AQTRA+ERFGG P SDFHLAYTRDCARF+AFRGL CNE+GGWD LG + VVGAQYRDLG G+VHKNH Y I+RSS D+VVV SAFD A+L+ET+L RA AE LFDP G+CTVHAVQGRTV+G+L+IHQARH ++DVYW+YTAISRATGPSNV V+DDIHRS SDMS+ R SW + KV SY+ ADV A RL + EGGQ++ AL+++L R YGGRCN C+ +LVWAVYSERQPTLDRLDCALPHT NVDVKCL+CNRARG LGRG SKK++
Sbjct: 573 TVPVFGHMDEVEEFDGHNIEDWTLYIIKLDA--------LERTWYRDGFWALGALILDETRLRVLEARNALELCGASDFSFQCDAVFFRGCSSVQEKMRLRFNQLFSGNDKTPGTLKFEPALKNPLCGERRVFEGIVVKLSLDALPPAMRKIPCPLKPRLLVIPLWDGVGTGFSSMEEAHSAWRRLGKNTKRNMWPEICEAESPSKLENLLRGSLSRQGSRIVCAVTGEHGGAGKSYCAFNAAKNIFKTGLVVTPTNSLRTSFTNLPTGWNVKTADHQLGFYLGDDSHVKKTAGSIRALKVDVIIIEEAAYMPLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKFILEKAFPTCFHVFARKRDKTVDEQVEMDDGLLHILAAGNDSHEAQTRAIERFGG--GCLDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNLGRVHKNHNYNIIRSSGDTVVVASAFDGAASLQETSLCRAEAENLFDPSGACTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVIDDIHRSKSDMSDRERASWISGKVSSYIYADVAAERLGSDEGGQYREALVQELQRSYGGRCNLCNHDLVWAVYSERQPTLDRLDCALPHTIDNVDVKCLKCNRARGSLGRGKSKKRK 1246
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 924 bits (2388), Expect = 2.590e-305 Identity = 456/688 (66.28%), Postives = 530/688 (77.03%), Query Frame = 1
Query: 37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEEYIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEEKSDG----DTRSFGRCADMTTAILASSQTEAD---QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRTWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHPPAPHRITHFVRPARTIQKCHVPGLVQDLLARDLGSP 2079
A +++R A YRWCY EQVDQA PL +RSNGWRYRGPR G TYRRQAVFG G+R+R+ FP +GPGH WFNSHP+GGDP+L FQ WAR +L R +VH DA+AWR AFVDVEGGG GQLVVS+ADETWRVILCW S RRIDV+ GIP SL LQVR+GV S+ P FRQL+IA+FGHR+V+Y P+T FG W+E+LP ACLAVLVAD+WRD Q+ LL R+R+RFGFRDVDP TGAF S GGR KKG NAL GGNYFRNLYSI+LERD+G EF W+SG+ PA+T+RHLEKWL TKA VVVWSHRG+GA ++GP T+LRP LHVGVREGHVYRLVL+G W+DRF G SLDVAVEH V T R FRRI+E EEE+ T++F AD+ + I+A QT Q +KR+ G K KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPA GII+RTWC ASMG LDPD E D+ATRLIELH LG K RGV+DFRVSS+YS SLLALL VCWRGPIVGAEDASG+ YG DWQCDINGAHTAA+++M +P F HMDEV+ FDGH IEDWTLY+++LDA G+PDVFLNADVTPVFGRNY+RYL L+ HR+THFVRP+RT+ KCH+ LV+DLLA +LG P
Sbjct: 8 AVSSSRAASYRWCYVEQVDQAEPLANRSNGWRYRGPR-GVTYRRQAVFGTGYRIRISFPSS-AGPGHTWFNSHPVGGDPNLYSFQTWARMVLERGMVHPRDAEAWRTAFVDVEGGGQGQLVVSSADETWRVILCWASAGRRIDVDSQGIPFSLLSLQVRSGVDSQSPLFRQLNIATFGHRVVRYTPMTAFGKKWQEQLPGACLAVLVADTWRDSQVDLLARERKRFGFRDVDP-TGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRF--------GSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSKCHISKLVRDLLAHELGDP 682
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 858 bits (2218), Expect = 4.890e-293 Identity = 433/695 (62.30%), Postives = 515/695 (74.10%), Query Frame = 1
Query: 37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQAVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLL--VRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSIMLERDVGPAEFAAWLSGEEYIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEEKSDGDTRSFGR-----CADMTTAILASSQTEAD--QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRTWCGASMGGLDPDVLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHPPAPHRITHFVRPARTIQKCHVPGLVQDLLARDLGSPSSKTW 2094
A ++ YRWCY EQVDQ AP+ RSNGWR +R+ FP P GPG+RWFNSHPLGGDP+L +FQ WART+L+ +VH DA+AWR AFV+VEGGG GQLVVSAADE+WRVILCW S RRI+V+ GIP SL LQVR+G+ S+ P FRQL+IA+FGHR+V+Y P+T FG W+++LP ACLAVLVAD WRD Q+ LL ++RRRFGFRDVDP TGAFM S GGR KKG NAL GGNYFRNLYSI+LERD+G EF W+SG+ PA+T+ HLEKWL T ASVVVWSHRG+GA ++GP T L+P LHVGVREGHVYRLVL+GPW DRF G SLDVA++H V T R FRRI+E EE+ + DT FG AD+ + I+A +QT D +Q KR+ G K KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPAHG+++RTWC ASMGGLDPD E D+ATRLIELH LG K RGV+DFRVSS+YS SLLALLEVCWRGPIVGAEDASG++YG DWQCDINGAHTAA+++M +P F HMDEV+ FDGH IEDWTLY ++LDA G+PDVFL+ADV PVFGRNY+RYL L+ HR+THFVRP+RT+ +CH+P LV+DLLA +L +TW
Sbjct: 8 AVSSPHATSYRWCYVEQVDQVAPVVGRSNGWR---------------------VRISFPSSP-GPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVILCWASAGRRIEVDT-GIPISLVSLQVRSGIDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVADVWRDSQVYLLKKTKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRF--------GSSLDVAIDHSVRTYRKFRRISEMTVEEQ-EPDTTGFGTKTFSCVADIVSDIMAINQTGGDHNRQPVEKRKHGR--KVAESKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYTIKLDALGEPDVFLDADVMPVFGRNYKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVRDLLAHEL----ERTW 663
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Match: A0A6H5KMJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ7_9PHAE) HSP 1 Score: 860 bits (2222), Expect = 5.470e-292 Identity = 449/726 (61.85%), Postives = 538/726 (74.10%), Query Frame = 2
Query: 2213 GGKVVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARCRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKNFDTMGAAHAAWRSVGKDDKRKMWLDICAAESPANLEQLLRQLISQEGRVVCAVT--GEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWIVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYTSIHALSMILAAAHSN-GVHVMGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLLARKRDRTIDEQVEMDDSLLYILDAGDNSAVAQTRALERFGG--IEPTRYGPRVSDFHLAYTRDCARFHAFRGLTRCNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLNRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSVSDMSEHARRSWATRKVWSYLRADVKAGRLDNGEGGQHKGAL---------------------IEQLLRCYGGRCNSCSIELVWAVYSERQPTLDRLDCALPHTPGNVDVKCLRCNRARGGLGRGLSKKKEEENVSEK*PLSSKS 4309
GGK+VPVL EV+R+K+ELR G+LGI+ L +G+AYLCF+A R WYRDGFWALGTL LDETRLRVLE RN L G S FSYQCDAVFFRG VQE+ R +H FSG+ KTP TLKF PALKN +R VF GI +PP L V+PLW GIG +F +M AH AWR +G + KR +W +IC AESP+ L+ L R L++ + + A+ GEHGGAGKS+ RAA A F+TGLVLTPTNSLRTSY +LP GW V+TADHQLGFY+ DD++V+KTAGSI +VDV+IIEEAAY + LSMILAAAHS+ G HV+GTYDTHQLQPV +SSGMSIS DNVDR++++E+AFPTCFH+ ARKRD+T+++Q EMDD LL+ L AG++S AQTRA+ RFGG IE P SDFHLAYTR+CARFHAFRGL CNEAG WD LG + VVGAQYRDLG GK HKNH Y ++RSS D+VVV SAFD GA+LEET+L RA AE +FDPPGSCTVHAVQGRTV+G+L+IHQARHR +DV+WLYT +SRATGPSNV V+DDIHRS SDMS+ R SW +RKV SY+ ADV AGRL + EGGQH AL +++L R YGGRCN C+ EL+W V SERQPTLDRLDCALP+ GNVDV CL+CNRARG LGRG SKK++ ++ P++ K+
Sbjct: 145 GGKIVPVLCEVDRVKAELRTG--QGDLGIDSLRTGNAYLCFDAERTWYRDGFWALGTLTLDETRLRVLEARNAL---GASDFSYQCDAVFFRGSSSVQEKIALRLDHLFSGDEKTPVTLKFGPALKNPLCGERRVFEGI--------VPP------------LSVIPLWDGIGTSFHSMEGAHDAWRRLGLNTKRDLWPEICEAESPSILKSLFRGLLTPQVTALSALLRYGEHGGAGKSYRTIRAATATFETGLVLTPTNSLRTSYPNLPSGWSVKTADHQLGFYLSDDSYVKKTAGSIRTLKVDVIIIEEAAYIPLRTLSMILAAAHSSSGTHVIGTYDTHQLQPVCDSSGMSISRDNVDRKVIVEKAFPTCFHVFARKRDKTLEDQAEMDDDLLHTLAAGNDSDEAQTRAIARFGGEHIE----NPSPSDFHLAYTRECARFHAFRGLLGCNEAGDWDGLGCQTVVGAQYRDLGNPGKNHKNHMYNVIRSSADTVVVASAFDGGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTTVSRATGPSNVRVVDDIHRSESDMSDRERISWVSRKVSSYIYADVTAGRLKSDEGGQHGEALXXXXXXXXXXXXXXXXXXXXXVQELDRSYGGRCNLCNHELIWTVCSERQPTLDRLDCALPNIIGNVDVMCLKCNRARGSLGRGKSKKRKINSLCRGRPVAFKT 841 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig80.15907.1 >prot_C-linearis_contig80.15907.1 ID=prot_C-linearis_contig80.15907.1|Name=mRNA_C-linearis_contig80.15907.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=740bp MLRRHFKRRNYFAAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQback to top mRNA from alignment at C-linearis_contig80:603898..608225+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig80.15907.1 ID=mRNA_C-linearis_contig80.15907.1|Name=mRNA_C-linearis_contig80.15907.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4328bp|location=Sequence derived from alignment at C-linearis_contig80:603898..608225+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig80:603898..608225+ >mRNA_C-linearis_contig80.15907.1 ID=mRNA_C-linearis_contig80.15907.1|Name=mRNA_C-linearis_contig80.15907.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4440bp|location=Sequence derived from alignment at C-linearis_contig80:603898..608225+ (Chordaria linearis ClinC8C monoicous)back to top |