mRNA_C-linearis_contig80.15905.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig80.15905.1
Unique NamemRNA_C-linearis_contig80.15905.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: A0A6H5K0Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y1_9PHAE)

HSP 1 Score: 590 bits (1520), Expect = 1.240e-205
Identity = 336/506 (66.40%), Postives = 364/506 (71.94%), Query Frame = 1
Query:    1 GPFLYEQRETAPPWSVGWLENSTAAVGQPIDDPFSGPRGETTDDQGHTDEQKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRDTGSSGDVVFRSLSRPPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFAPNVVPGD-PSSGVMPGMPYFLCGGNAAQGTYVYYPYVPSLSGQQDPAASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKRGQQTGRSSNXXXXXXXXXXT-------SVRASDLGYSAG--------------GAXXXXXXXXSNV--------------GAGSQMELDFFTPEGSLGQSLARQ 1410
            GPF +E RETAP WSVGWL  S     Q  DD FS PR     D  HTD+QKKK+FVGMAPKSAYEEDYRAVF PFGT IDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDK+IMPGGFRTLVVT+ADDRRGPQ  A   TT RRD   SGDV+ RSLSRP SFMGSD        S   +L G NRS    PQAG    AP + PG  PSSG++ GMPYFLCGGN  QGTYVYYPYVPS S Q D   S A P+ +GAKPH+A +VGSPA GNN+RC+LGAR  QE GY GD  +R+FGTGG EE+GRRWAKQSVGP GANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+KP+EA+AAISSMNGFFIGQKRLKVVRKRGQQT R  +  XXXXXXXX        S R  D GY+A               G         S V              G+GSQ +LDF TPEG LG S+ R+
Sbjct:   10 GPFSFEHRETAPTWSVGWLPTSPTMAEQHNDDAFSRPREMLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKYIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDVLLRSLSRPSSFMGSDSSVGGSIPS-FGNLVGQNRSTVAAPQAGATAVAPTIAPGSRPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGLSVA-PVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSXXXXXXXXXXXXXXXXSGRPRDPGYAASDGSCGLARPDRGASGIAGSNVVVGSGVNNGNGDGTSHRSIFGSGSQADLDF-TPEGLLGPSMTRR 512          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: D7FV61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV61_ECTSI)

HSP 1 Score: 573 bits (1477), Expect = 1.210e-201
Identity = 297/396 (75.00%), Postives = 318/396 (80.30%), Query Frame = 1
Query:    1 GPFLYEQRETAPPWSVGWLENSTAAVGQPIDDPFSGPRGETTDDQGHTDEQKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRDTGSSGDVVFRSLSRPPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFAPNVVPGD-PSSGVMPGMPYFLCGGNAAQGTYVYYPYVPSLSGQQDPAASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRL 1185
            GPF YE RETAPPWSVGWL  S     Q  DD FS PR     D  HTD+QKKK+FVGMAPKSAYEEDYRAVF PFGT IDIYVIRDRNGFSKGCAFVRYESV+SASDAIEALHDKHIMPGGFRTLVVT+ADDRRGPQ  A   TT RRD   SGD +FR+LSRP SFMGSD        S L ++ G NRS  T PQAG   FAP V PG  PSSG++ GMPYFLCGGN  QGTYVYYPYVPS S Q D   SSA P  +GAKPH+A +VGSPA GNN+RC+LGAR  QE GY GD  +R+FGTGG EE+GRRWAKQSVGP GANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+KP+EA+AAISSMNGFFIGQK L
Sbjct:    7 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRALSRPSSFMGSDSGGGGTIPS-LGNVVGQNRSTVTAPQAGATAFAPTVAPGSGPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHD-TGSSAAPAGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKFL 400          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.430e-63
Identity = 159/365 (43.56%), Postives = 194/365 (53.15%), Query Frame = 1
Query:  148 EQKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRDTGSSGDVVFRSLSRPPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFA-PNVVPGDPSSG-VMPGMPYFLC--GGNA----AQGTYVYYPYVPSLSGQQDPAASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKR-GQQT 1215
            EQ+ K+FVGMAPKSA E++ RAVFAP+GTL +I+VIR+++G +KGCAFV+Y + +SA DAIEALH+++ M GG R LVV  AD++RG QA AG                     R    +GS G              G        P AG  G   P  +PG P S  +M GMPY +   GG A    AQG+YVYYPY            +   P   G    Y     SP+ G                                       + + GP GANLF+Y+LP  L+DADLATAFAPFG VLSAKVY DR +GESKGFGFVSY+ P  A+AAI+ MNGF IG KRLKV  KR GQ T
Sbjct:  128 EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAG---------------------RLGGLIGSPGRHGSGPHPEAGGWMGH-------PGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPY-----------GAPGYPPQPGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQST 452          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: D0NNK0_PHYIT (CUG-BP-and ETR-3-like factor, putative n=17 Tax=Phytophthora TaxID=4783 RepID=D0NNK0_PHYIT)

HSP 1 Score: 168 bits (425), Expect = 6.410e-43
Identity = 141/362 (38.95%), Postives = 178/362 (49.17%), Query Frame = 1
Query:  151 QKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRD-RNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRR-----GPQAGAGTDTTNRRDTGSSGDVVFRSLSR-PPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFAPNVVPGDPSSGVMPGMPYFLCGGNAAQGTYVYY-PYVPSLSGQQDPAASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKRGQQ 1212
            Q+ K+F+GM PK+A E   R VF  FG++ ++Y++R    G SKGCAF++++   SA  AIE ++    M  G   LVV  AD RR          A T+       G+   + F  L +    +M          M    + A    SP       VAG    V  G  +SG  PG P           +++YY PY          AA +A P   G  P+ A A      G + +  LGA             +   G G    K  R   Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY   + ADAAI+SMNGF IG KRLKV  KR  Q
Sbjct:  119 QEHKLFIGMIPKTADEAAIRDVFELFGSIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADSRRQRLQRARNLAAATNAYWPLPPGAG--LAFPQLQQLQQQYM--------QQMQAFGAQAAAGMSPT------VAGLGSPV--GATASG--PGSP---------TNSFMYYNPY--------GFAAGAAAPYGFGGMPNVAAA------GFDMQTGLGA------------SLDLQGQGAEAAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQ 425          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: W7U5L7_9STRA (Rna binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.090e-42
Identity = 144/414 (34.78%), Postives = 191/414 (46.14%), Query Frame = 1
Query:  139 HTDEQKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRDTGSSGDVVFRSLSRPPSFMGSDGXXXXXXMSCLSSLAGP---NRSPATVPQAG------------VAGFAPN----------VVPGDPSSGVMPGMPYFLCGGNAAQGTYVYYPY----VP-SLSG----QQDPAASSACPLVLGAKPHYAIAVGSPAGGN------------NNRCDLGARRVQEGGYAGD-------------GMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKR 1203
            HT E++ K+FVGM PK+  E     +FAPFG + +I++IR   G  KGCAF+++    SA  AIEAL+++ ++ G  R +VV  A+ +R  + G G         G       R            G      M+ +  + GP   +  P  +P  G            VAG +P             PG  SS    G PY++ G +       ++P+    VP  + G    Q  P  +   P  L   P++    G P G                    G+  V  GG  G              G    F + GG   G   +K   GP GANLF+Y+LP  LTDADLATAF PFG V+SAKVY D+++GESKGFGFVSY  P  ADAAI +MNGF IG KRLKV  KR
Sbjct:  117 HT-ERENKLFVGMLPKNVDEGLVEGLFAPFGKIKEIHIIRSVEGEGKGCAFLKFVERSSAIQAIEALNERQVVEGASRPMVVRFAESKRSGEGGQG--------AGVXXXXXRRGGXXXXXXXXXXGPMEGLLMAPMMMVPGPLGHSLHPPNLPLRGGSEGGAAGGGLGVAGLSPTGRGKGXXXXXEAPGGGSSPYS-GAPYWMLGPHGQPQASAHFPFQAGPVPMGMLGLPHHQYLPYGAVRAPPYLYYPPYFGP--GGPQGHGAAADGXXXXXXXXXXXXXGSPFVYGGGVPGGMRVNTAVGAPHGAGHAGAFASRGGXXXG---SKPLEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGFGFVSYDSPLAADAAIKAMNGFQIGTKRLKVQHKR 515          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: A0A484EFV5_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EFV5_BRELC)

HSP 1 Score: 163 bits (413), Expect = 2.730e-41
Identity = 136/360 (37.78%), Postives = 175/360 (48.61%), Query Frame = 1
Query:  151 QKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRD-RNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGA---GTDTTNRRDTGSSGDVVFRSLSR-PPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFAPNVVPGDPSSGVMPGMPYFLCGGNAAQGTYVYY-PYVPSLSGQQDPAASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKRGQQ 1212
            Q+ K+F+GM PK+A E   R VF  FGT+ ++Y++R    G SKGCAF++++   SA  AIE ++    M  G   LVV  AD RR     A      T +         + F  L +    +M          M    + A    +PA      +AG       G P  G        + G  +   +++YY PY          AA++A P        +  AVG          D+ A        +G G+  +   G    K  R   Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY   E ADAAI+SMNGF IG KRLKV  KR  Q
Sbjct:  116 QEHKLFIGMIPKTADENAIREVFELFGTIDEVYILRHPATGQSKGCAFLKFKDRTSALAAIEEVNGNVTMDRGTSPLVVKFADSRRQRLQRARNMAVATNSYWPLHPGAGLAFPQLQQLQQQYM--------QQMQAFGAQAAAGLNPA------IAGL------GSPMGGT-------VGGAGSPTNSFMYYNPY--------GFAANAANPY------GFMPAVGPTM----ESFDMQA--------SGTGLELQGSGGDAAAKASRATSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSAEAADAAIASMNGFQIGSKRLKVQHKRIHQ 422          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.640e-41
Identity = 136/365 (37.26%), Postives = 178/365 (48.77%), Query Frame = 1
Query:  142 TDEQKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRDTGSSGDVVFRSLSRPPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAG-----FAPNVVPGDPSSGVMPGMPYFLCGGNAAQGTYVYYPYVPSLSGQQDPA-ASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKR--GQQ 1212
            T EQ+ K+F+GM  ++A E   R VFA FG + +IY+IR+ +G +KGCAF++Y    SA  AI  L++K +M G  R L+V  AD +   Q  A  +  + R  GS G          P F+                +  P++     PQ G +      + P    G PS+       +   G ++  G           SG Q P  A SA   V    P++A+    P+ G+        +  Q   +  DG                  +   GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY     ADAAI  MNGF IG KRLKV  KR  GQQ
Sbjct:  214 TPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKA--QRRARGNGMSSRGLGSPGRGQSGHNPSSPYFIPPVPVYPNYQAQRAPPIGIPHQYSQYPPQYGQSSSQNFMYVPTGPYGYPSAPFN----HNQMGNHSGGG-----------SGAQQPGGAPSAFEPVP--NPNHAV---HPSRGSPRTSPAPGKVYQ---HRSDGPNTN-------------TRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKRVSGQQ 540          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: A0A024FWI3_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FWI3_9STRA)

HSP 1 Score: 164 bits (415), Expect = 3.760e-41
Identity = 133/362 (36.74%), Postives = 179/362 (49.45%), Query Frame = 1
Query:  151 QKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDR-NGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRDTGSSG--------DVVFRSLSRPPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFAPNVVPGDPSSGVMPGMPYFLCGGNAAQGTYVYY-PYVPSLSGQQDPAASSACPLVLGA-KPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKR 1203
            Q+ K+F+GM PK+A E+    +F  FG + +++++R +  G SKGCAF++++   SA  AIE L+ K  M  G   LVV  AD RR       + T+   DT  +G        D     +S P S M          +    + A                       G  S  V+PG         +   +++YY PY  +LSG      + +    +GA  P Y+ ++G  +G ++      A  +     AG  +    G       G R   Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY   E AD AI+SMNGF IG KRLKV  KR
Sbjct:  163 QEHKLFIGMIPKTATEQAIYEIFGDFGPIDEVFILRHQPTGQSKGCAFLKFKERESAVAAIEQLNGKITMMNGVSPLVVKFADSRRQRLQRVRSTTS---DTSQAGYWQMPHIPDGSINGISLPVSQMQQMQQHYMQQVQAFGTQAN----------------------GIGSGSVLPGS-------TSPTNSFMYYNPY--ALSGAMPYGYNGSMYETMGAPNPAYSESIGH-SGSSDVMTGADAAALTSS-LAGIDINANAG-------GTRSTTQLEGPPGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKLTGESKGFGFVSYDASEAADNAIASMNGFQIGSKRLKVQHKR 481          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: A0A662WJB0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJB0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 5.650e-41
Identity = 137/364 (37.64%), Postives = 177/364 (48.63%), Query Frame = 1
Query:  151 QKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRD-RNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQ------AGAGTDTTNRRDTGSSGDVVFRSLSR-PPSFMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFAPNVVPGDPSSGVMPGMPYFLCGGNAAQGTYVYYPYVPSLSGQQDPAASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKRGQQTG 1218
            Q+ K+F+GM PK+A E   R VF  FGT+ ++Y++R    G SKGCAF++++   SA  AI+ ++    M  G   LVV  AD RR         A A  +T      G+   + F  L +    +M          M    +      +P     +   G A    PG P++  M   PY   G  A  G    +  +PS+ G  D  AS     ++GA           AGG     D  ++ V+                    K  R   Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY   + ADAAI+SMNGF IG KRLKV  KR  Q G
Sbjct:  149 QEHKLFIGMIPKTADEAAIREVFELFGTIEEVYILRHPATGQSKGCAFLKFKDRNSALAAIDEVNGAVTMDRGTSPLVVKFADSRRQRLQRARNLAAAAANTYWPMPPGAG--LPFPQLQQLQQQYM--------QQMQAFGAQTAAGMNPVAAGLSSPVGAAATG-PGSPTNSFMYYNPYGFAGA-APYG----FNGLPSVGGGFDMQAS-----LMGA-----------AGG----VDAQSQGVEA-----------------AAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGSKRLKVQHKRIHQRG 459          
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Match: A0A7S4QD22_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QD22_9STRA)

HSP 1 Score: 165 bits (418), Expect = 6.790e-41
Identity = 141/395 (35.70%), Postives = 184/395 (46.58%), Query Frame = 1
Query:   58 ENSTAAVGQPIDDPFSGPRGET---TDDQGHTDEQKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRDTGSSGDVVFRSLSRPPS-FMGSDGXXXXXXMSCLSSLAGPNRSPATVPQAGVAGFAPNVVPGDPSSGVMP---GMPYFLCGG--NAAQGTYVYYPYVPSLSGQQDPAASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIRRFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRKRGQQT 1215
            E++  AV + + D ++ PRG+            + + K+FVGM P+   E+D R +F+PFG +  IY+IR+ +G  KGCAFV++    SA  AI  LH ++ M G  R+LVV  AD  +G +  +      RR+   +   V      P S F    G              GP   P   PQAG    A       P  G+ P   G   +  G     A G Y +  + P  S  Q                  A   G P G +  +   G     +  + G G  R      G+       +   GP GANLF+Y+LP  LTDADLATAF PFG V+SAKVY DR TGESKGFGFVSY     A+ AI  MNGF IG KRLKV  KR  +T
Sbjct:  245 EDAEKAV-ETLHDKYTFPRGKKPVQVRPASEGSDTEVKLFVGMLPRKTTEKDLREIFSPFGDISAIYLIRNDDGTQKGCAFVKFHQRESAQAAINTLHGQYCMEGMRRSLVVKYAD--KGYRRASRRYQAARREAYEN--AVMHGHPNPGSVFYVPSGPGGPPPQMPGFPPGGPMAYPQP-PQAGP--HAEGTQGPSPPMGISPPVSGTGQYSVGQPPQYATGAYPHGSHTPPSS--QXXXXXXXXXXXXXXXXXAAAPYGMPQGFSGGQAGPGGAHQNKPRFYGRGQNRD-----GQLPHATTPRPREGPAGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVISAEHAIEQMNGFQIGTKRLKVQHKRVTKT 624          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0Y1_9PHAE1.240e-20566.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV61_ECTSI1.210e-20175.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV60_ECTSI1.430e-6343.56Trinucleotide repeat containing 4, isoform CRA_d n... [more]
D0NNK0_PHYIT6.410e-4338.95CUG-BP-and ETR-3-like factor, putative n=17 Tax=Ph... [more]
W7U5L7_9STRA2.090e-4234.78Rna binding protein n=3 Tax=Monodopsidaceae TaxID=... [more]
A0A484EFV5_BRELC2.730e-4137.78Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S1BYN5_9STRA3.640e-4137.26Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A024FWI3_9STRA3.760e-4136.74Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A662WJB0_9STRA5.650e-4137.64Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A7S4QD22_9STRA6.790e-4135.70Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:585480..587493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score582.0
Seed ortholog evalue2.5e-163
Seed eggNOG ortholog2880.D7FV61
KEGG koko:K13207
Hectar predicted targeting categoryother localisation
EggNOG free text desc.positive regulation of mRNA splicing, via spliceosome
EggNOG OGsKOG0144@1,KOG0146@2759
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-12_007410.1
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons3
Model size1425
Cds size1425
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15905.1prot_C-linearis_contig80.15905.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig80 585480..587493 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930594.0029097-CDS-C-linearis_contig80:585479..5858021622930594.0029097-CDS-C-linearis_contig80:585479..585802Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 585480..585802 -
1690881150.3494236-CDS-C-linearis_contig80:585479..5858021690881150.3494236-CDS-C-linearis_contig80:585479..585802Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 585480..585802 -
1622930594.0185292-CDS-C-linearis_contig80:586077..5870531622930594.0185292-CDS-C-linearis_contig80:586077..587053Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 586078..587053 -
1690881150.3656862-CDS-C-linearis_contig80:586077..5870531690881150.3656862-CDS-C-linearis_contig80:586077..587053Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 586078..587053 -
1622930594.0380304-CDS-C-linearis_contig80:587367..5874931622930594.0380304-CDS-C-linearis_contig80:587367..587493Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 587368..587493 -
1690881150.375054-CDS-C-linearis_contig80:587367..5874931690881150.375054-CDS-C-linearis_contig80:587367..587493Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 587368..587493 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig80.15905.1

>prot_C-linearis_contig80.15905.1 ID=prot_C-linearis_contig80.15905.1|Name=mRNA_C-linearis_contig80.15905.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=475bp
GPFLYEQRETAPPWSVGWLENSTAAVGQPIDDPFSGPRGETTDDQGHTDE
QKKKIFVGMAPKSAYEEDYRAVFAPFGTLIDIYVIRDRNGFSKGCAFVRY
ESVRSASDAIEALHDKHIMPGGFRTLVVTIADDRRGPQAGAGTDTTNRRD
TGSSGDVVFRSLSRPPSFMGSDGGGGGGGMSCLSSLAGPNRSPATVPQAG
VAGFAPNVVPGDPSSGVMPGMPYFLCGGNAAQGTYVYYPYVPSLSGQQDP
AASSACPLVLGAKPHYAIAVGSPAGGNNNRCDLGARRVQEGGYAGDGMIR
RFGTGGGEEKGRRWAKQSVGPIGANLFVYYLPGSLTDADLATAFAPFGEV
LSAKVYYDRDTGESKGFGFVSYTKPEEADAAISSMNGFFIGQKRLKVVRK
RGQQTGRSSNSNNSANSANSTSVRASDLGYSAGGAGGGNGSSSSNVGAGS
QMELDFFTPEGSLGQSLARQVLVM*
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mRNA from alignment at C-linearis_contig80:585480..587493-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig80.15905.1 ID=mRNA_C-linearis_contig80.15905.1|Name=mRNA_C-linearis_contig80.15905.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2014bp|location=Sequence derived from alignment at C-linearis_contig80:585480..587493- (Chordaria linearis ClinC8C monoicous)
GGTCCCTTTTTGTACGAGCAGCGAGAGACAGCTCCTCCCTGGAGCGTTGG GTGGCTCGAAAACTCGACCGCGGCAGTGGGACAGCCCATCGATGATCCGT TCTCTGGGCCTCGAGGAGAGACGACGGTGAGAGATGCTAAGCCGGTCGGT TGACCATTGCTGCTGTGCGCTTTAGTCCAGTTTCAAGCATACGTAAGATG GTACATAAATGGAACCAAAGAGGGTGTCAAACACCGCCGAGTGGCAAAGC CAGAAACTTGGTTGTTGCGTCGAACTGCTACTGATACTTGTTGTCATCAA AAGGAATTGGAGGGAGGTAGGGGAGGGGCTTCCATGGAGGACTGTACACG ACGAATGTGAACAGAGGTACCTAGAAACACAAATCACGTTCACAGCACAT CTGTTAACCTGCTTGCTTTTGACTCCCCTCAAACCAGCAGGACGACCAAG GCCACACGGACGAGCAGAAGAAAAAGATCTTCGTCGGTATGGCACCCAAG TCCGCGTACGAAGAGGACTACAGGGCCGTGTTCGCCCCTTTTGGTACGCT GATCGACATCTACGTCATCCGGGACAGGAATGGCTTTAGCAAGGGTTGCG CCTTCGTTCGGTACGAGTCGGTGAGGAGCGCGAGCGACGCGATCGAGGCT CTTCACGACAAGCACATTATGCCTGGAGGCTTTCGCACGCTGGTGGTGAC CATCGCCGACGACCGCCGCGGCCCGCAAGCAGGTGCCGGCACCGACACCA CTAACCGCCGTGATACCGGTAGCTCTGGAGACGTAGTGTTCCGCTCTCTG TCTCGACCTCCTTCCTTCATGGGAAGCGATGGCGGCGGCGGGGGCGGAGG CATGTCGTGCTTGAGCAGCCTCGCAGGACCCAACAGGTCTCCCGCAACGG TGCCGCAGGCAGGAGTGGCAGGGTTCGCGCCCAACGTCGTACCGGGTGAT CCATCTTCCGGCGTCATGCCCGGCATGCCGTATTTCCTCTGCGGTGGGAA CGCTGCACAGGGAACCTACGTGTACTATCCGTACGTGCCATCATTGTCCG GCCAGCAGGACCCTGCTGCTTCCTCTGCTTGCCCTCTCGTATTGGGTGCC AAGCCCCACTACGCCATCGCCGTCGGTTCTCCCGCGGGTGGCAACAACAA CCGGTGCGACCTTGGTGCTCGCAGGGTGCAGGAGGGCGGCTACGCCGGGG ATGGGATGATCCGCAGATTCGGCACGGGAGGGGGTGAGGAAAAGGGCCGG CGCTGGGCGAAGCAGTCCGTCGGTCCCATAGGGGCCAACCTCTTCGTTTA CTACCTCCCAGGTTCTCTCACCGACGCCGACCTCGCCACAGCCTTCGCTC CTTTTGGAGAGGTGCTAAGCGCCAAGGTTTACTACGACCGAGACACCGGA GAAAGCAAGGGTTTTGGTGAGATATTGTTTTCGTTGTGCGGCATTAATTT AAGGCAGTCTTGACGCCTTGAATGAGCAGGAGCGAGAGAAATAGTATCGT ACGAGGAGCGCTAGGGCTGTAGTGTACCGTGGCCCGTGAAAGTACCACCT GATTGGCTTTTTGGCTCTCGACCAGCGTCCAGTGCAAGAAATATCTGTCC TACGTCAACTTTGCTTCAAATTCGTGCACCTTTCCTGACCGGCGCCCATC GTAACGTTCCGCTACATCTGCCCTCGCCTCAAAATCCACAGGCTTCGTGA GCTACACCAAGCCCGAAGAGGCGGACGCCGCGATTTCTAGCATGAATGGC TTCTTCATCGGGCAGAAGCGTCTCAAGGTCGTCCGGAAACGCGGACAGCA GACGGGCCGCTCCTCCAACAGCAACAACAGCGCCAACAGCGCCAACAGCA CCAGCGTTCGGGCCAGCGATCTTGGCTACTCTGCTGGTGGTGCGGGCGGA GGCAATGGTAGCAGCAGCAGCAATGTGGGAGCTGGATCACAGATGGAGCT AGATTTCTTCACGCCTGAGGGCTCTCTTGGACAGTCATTGGCGAGGCAAG TACTCGTCATGTAG
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Coding sequence (CDS) from alignment at C-linearis_contig80:585480..587493-

>mRNA_C-linearis_contig80.15905.1 ID=mRNA_C-linearis_contig80.15905.1|Name=mRNA_C-linearis_contig80.15905.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2850bp|location=Sequence derived from alignment at C-linearis_contig80:585480..587493- (Chordaria linearis ClinC8C monoicous)
GGTCCCTTTTTGTACGAGCAGCGAGAGACAGCTCCTCCCTGGAGCGTTGG
GTGGCTCGAAAACTCGACCGCGGCAGTGGGACAGCCCATCGATGATCCGT
TCTCTGGGCCTCGAGGAGAGACGACGGGTCCCTTTTTGTACGAGCAGCGA
GAGACAGCTCCTCCCTGGAGCGTTGGGTGGCTCGAAAACTCGACCGCGGC
AGTGGGACAGCCCATCGATGATCCGTTCTCTGGGCCTCGAGGAGAGACGA
CGGACGACCAAGGCCACACGGACGAGCAGAAGAAAAAGATCTTCGTCGGT
ATGGCACCCAAGTCCGCGTACGAAGAGGACTACAGGGCCGTGTTCGCCCC
TTTTGGTACGCTGATCGACATCTACGTCATCCGGGACAGGAATGGCTTTA
GCAAGGGTTGCGCCTTCGTTCGGTACGAGTCGGTGAGGAGCGCGAGCGAC
GCGATCGAGGCTCTTCACGACAAGCACATTATGCCTGGAGGCTTTCGCAC
GCTGGTGGTGACCATCGCCGACGACCGCCGCGGCCCGCAAGCAGGTGCCG
GCACCGACACCACTAACCGCCGTGATACCGGTAGCTCTGGAGACGTAGTG
TTCCGCTCTCTGTCTCGACCTCCTTCCTTCATGGGAAGCGATGGCGGCGG
CGGGGGCGGAGGCATGTCGTGCTTGAGCAGCCTCGCAGGACCCAACAGGT
CTCCCGCAACGGTGCCGCAGGCAGGAGTGGCAGGGTTCGCGCCCAACGTC
GTACCGGGTGATCCATCTTCCGGCGTCATGCCCGGCATGCCGTATTTCCT
CTGCGGTGGGAACGCTGCACAGGGAACCTACGTGTACTATCCGTACGTGC
CATCATTGTCCGGCCAGCAGGACCCTGCTGCTTCCTCTGCTTGCCCTCTC
GTATTGGGTGCCAAGCCCCACTACGCCATCGCCGTCGGTTCTCCCGCGGG
TGGCAACAACAACCGGTGCGACCTTGGTGCTCGCAGGGTGCAGGAGGGCG
GCTACGCCGGGGATGGGATGATCCGCAGATTCGGCACGGGAGGGGGTGAG
GAAAAGGGCCGGCGCTGGGCGAAGCAGTCCGTCGGTCCCATAGGGGCCAA
CCTCTTCGTTTACTACCTCCCAGGTTCTCTCACCGACGCCGACCTCGCCA
CAGCCTTCGCTCCTTTTGGAGAGGTGCTAAGCGCCAAGGTTTACTACGAC
CGAGACACCGGAGAAAGCAAGGGTTTTGGACGACCAAGGCCACACGGACG
AGCAGAAGAAAAAGATCTTCGTCGGTATGGCACCCAAGTCCGCGTACGAA
GAGGACTACAGGGCCGTGTTCGCCCCTTTTGGTACGCTGATCGACATCTA
CGTCATCCGGGACAGGAATGGCTTTAGCAAGGGTTGCGCCTTCGTTCGGT
ACGAGTCGGTGAGGAGCGCGAGCGACGCGATCGAGGCTCTTCACGACAAG
CACATTATGCCTGGAGGCTTTCGCACGCTGGTGGTGACCATCGCCGACGA
CCGCCGCGGCCCGCAAGCAGGTGCCGGCACCGACACCACTAACCGCCGTG
ATACCGGTAGCTCTGGAGACGTAGTGTTCCGCTCTCTGTCTCGACCTCCT
TCCTTCATGGGAAGCGATGGCGGCGGCGGGGGCGGAGGCATGTCGTGCTT
GAGCAGCCTCGCAGGACCCAACAGGTCTCCCGCAACGGTGCCGCAGGCAG
GAGTGGCAGGGTTCGCGCCCAACGTCGTACCGGGTGATCCATCTTCCGGC
GTCATGCCCGGCATGCCGTATTTCCTCTGCGGTGGGAACGCTGCACAGGG
AACCTACGTGTACTATCCGTACGTGCCATCATTGTCCGGCCAGCAGGACC
CTGCTGCTTCCTCTGCTTGCCCTCTCGTATTGGGTGCCAAGCCCCACTAC
GCCATCGCCGTCGGTTCTCCCGCGGGTGGCAACAACAACCGGTGCGACCT
TGGTGCTCGCAGGGTGCAGGAGGGCGGCTACGCCGGGGATGGGATGATCC
GCAGATTCGGCACGGGAGGGGGTGAGGAAAAGGGCCGGCGCTGGGCGAAG
CAGTCCGTCGGTCCCATAGGGGCCAACCTCTTCGTTTACTACCTCCCAGG
TTCTCTCACCGACGCCGACCTCGCCACAGCCTTCGCTCCTTTTGGAGAGG
TGCTAAGCGCCAAGGTTTACTACGACCGAGACACCGGAGAAAGCAAGGGT
TTTGGCTTCGTGAGCTACACCAAGCCCGAAGAGGCGGACGCCGCGATTTC
TAGCATGAATGGCTTCTTCATCGGGCAGAAGCGTCTCAAGGTCGTCCGGA
AACGCGGACAGCAGACGGGCCGCTCCTCCAACAGCAACAACAGCGCCAAC
AGCGCCAACAGCACCAGCGTTCGGGCCAGCGATCTTGGCTACTCTGCTGG
TGGTGCGGGCGGAGGCAATGGTAGCAGCAGCAGCAATGTGGGAGCTGGAT
CACAGATGGAGCTAGATTTCTTCACGCCTGAGGGCTCTCTTGGACAGTCA
TTGGCGAGGCAAGTACTCGTCATGTAGGCTTCGTGAGCTACACCAAGCCC
GAAGAGGCGGACGCCGCGATTTCTAGCATGAATGGCTTCTTCATCGGGCA
GAAGCGTCTCAAGGTCGTCCGGAAACGCGGACAGCAGACGGGCCGCTCCT
CCAACAGCAACAACAGCGCCAACAGCGCCAACAGCACCAGCGTTCGGGCC
AGCGATCTTGGCTACTCTGCTGGTGGTGCGGGCGGAGGCAATGGTAGCAG
CAGCAGCAATGTGGGAGCTGGATCACAGATGGAGCTAGATTTCTTCACGC
CTGAGGGCTCTCTTGGACAGTCATTGGCGAGGCAAGTACTCGTCATGTAG
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