mRNA_C-linearis_contig80.15903.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: D7FV63_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV63_ECTSI) HSP 1 Score: 555 bits (1429), Expect = 1.850e-197 Identity = 259/335 (77.31%), Postives = 295/335 (88.06%), Query Frame = 1
Query: 10 KAPTKSSDAAKAADKEPSKSSGLASSIAWVIVLAVSLVYHYANEQLVAKRELPVKSDVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFAPNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLKADIYPGFGWADHVNSYLDLKGNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTSPVSKDIFNEQAYSTMFDLGYVTDEHW 1014
KAP K S+A ++ +KEP K S + S I W+ VLAV+L+Y + +E+ ++ RELP+ SD+FV+SYPKSGNFW+RFLLAHTWLYSQPGESNWHRE+DFNSIE T+PDLEYGPNRRDY HDKFRAFKSHQPFAP AVAGKCA+TVG M+D QCACPNCP KW RILHLVRDGRDVMCSYYHFR+GL NLDPP+M FEEFLKAD YPGF WA+HVNSYLDLKGNSSYD++TVKYEDLHRAPLET+VEV+KW GL HSE+V+QRAI RSSFKSMRRKEEA GLLIFD+ +P RDKSWRMTRKG++GGWEECFTSP SKDIFNE AY T+F LGYV D+ W
Sbjct: 15 KAPCKPSNA-ESGEKEPRKGSWVPS-ITWLFVLAVALIYRFVDERQISTRELPLPSDLFVVSYPKSGNFWVRFLLAHTWLYSQPGESNWHREIDFNSIERTIPDLEYGPNRRDYQLHDKFRAFKSHQPFAPKAVAGKCADTVGTMDDHQCACPNCPPKWRRILHLVRDGRDVMCSYYHFRMGLNNLDPPDMGFEEFLKADTYPGFTWAEHVNSYLDLKGNSSYDVLTVKYEDLHRAPLETLVEVSKWAGLDHSEKVLQRAIVRSSFKSMRRKEEARGLLIFDEKYPDRDKSWRMTRKGEAGGWEECFTSPASKDIFNELAYDTLFGLGYVQDKRW 347
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: A0A7R9UAB6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAB6_9STRA) HSP 1 Score: 234 bits (596), Expect = 3.740e-71 Identity = 132/346 (38.15%), Postives = 200/346 (57.80%), Query Frame = 1
Query: 97 VIVLAVSLVYHYANEQLVAKRELPVKSDVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRA-----------------FKSHQPFAPNAVAGKCAETVG-AMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLKADIYPGFGWADHVNSYLDL--------KGNSSYD------LMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFT---SPVSKD-----IFNEQAYSTMFDLGYVTDEHW 1014
++V A+ + Y ++Q+ LP SDV + S+P+SG+FW+RF+LAH + G++ +DF+++E PDLEYGPNR+ Y DK A +KSH P A C +++G +E+ C CPNCP + R+++LVRDGRDVMCSYY F+ LG+ + N F EFL++++YPG WA H +SY D G S D ++ ++YEDLH PL + + K+ G++ +E V++ ++ +S ++ MR EE GL +FD+ + QRD S+R+ RKGK G W ECF SP D +FN ++++TM LGY+ DE+W
Sbjct: 15 LLVAALIPLGAYLDKQM----RLPRSSDVLLASFPRSGSFWVRFMLAH----AAVGDAV---VVDFHNLEELFPDLEYGPNRKIYVGEDKPSAEQEGFMRLHKRVELPPIYKSHMPLIAGAEP-PCFDSIGPGVEEFACQCPNCPPHFKRVIYLVRDGRDVMCSYYSFQKTLGH-ESANATFVEFLQSEVYPGVSWAKHASSYSDFPTPEVSAASGKSEADEQKAPEVLWLRYEDLHEDPLRELKRIMKFLGVRATEVVLKESVRKSGYEVMRETEEDGGLKLFDKHYSQRDPSFRVVRKGKVGSWRECFAKEGSPEEIDEEARKVFNAESFATMKKLGYLEDENW 347
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: A0A7S1U3P1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3P1_9STRA) HSP 1 Score: 217 bits (553), Expect = 7.750e-65 Identity = 118/318 (37.11%), Postives = 178/318 (55.97%), Query Frame = 1
Query: 154 KRELPVKSDVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRA-----------------FKSHQPFAPNAVAGKCAETVG-AMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLKAD-IYPGFGWADHVNSYLDLK--------GNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTS----PVSKDIFNEQAYSTMFDLGYVTDEHW 1014
+ + P DV ++SYP+SG+FW+RFLLA + G+S +DF+++E PDLEYGPNR Y ++ +KSH P A C +VG + ++ C CPNCP KW R+++LVRDGRD +CSYY+F+ LG + + F +FL+A+ +YPG WA+HV SYLDL +++ V+YEDLH P + + V + G++ ++ V++ A+ +S F SMR +EE GL +FD+ + R + +R+ RKGK G WE+CF +++ FN + M LGYV W
Sbjct: 29 RSKAPRAEDVLLVSYPRSGSFWLRFLLAQ----AARGDS---LNIDFHNLEDIFPDLEYGPNRAVYVGAEEMSTDYKEVRRERPRVRLPEIYKSHMVHRPGAEP-PCDVSVGPGLHETACECPNCPEKWRRVIYLVRDGRDALCSYYNFQRNLGAENTAD-GFSDFLRAESLYPGVSWAEHVRSYLDLPTPGVASGASEEGPEVLWVRYEDLHADPAKELRRVLNFLGVRATDVVIREAVRKSEFSSMREQEEDGGLRLFDRHYSDRQEEFRVVRKGKIGSWEDCFGKNGAFEEAREAFNAENLDVMQKLGYVESARW 337
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: A0A7S2UZE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZE9_9STRA) HSP 1 Score: 186 bits (473), Expect = 1.720e-52 Identity = 109/270 (40.37%), Postives = 159/270 (58.89%), Query Frame = 1
Query: 166 PVKSDVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFA---PNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLKA--------DIYPGFGWADHVNSYLDLKGN-SSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEE-VVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTS 936
P DV + S+P+SG+FW+RFLLA +Y + N+ ++FNSIE +PDLEYGPNR Y DK R S + P + + ++ M + CPNCP +W RI+++VRDGRDVMCSYY+F+ LG+ N F EFL IYPG W DHV S+ ++ + SS ++ V+YEDLH P + + ++ ++ + E+ ++Q+AI SS + M+RKEE G +FD+ RD+ +R+ RK +GGW ECF S
Sbjct: 56 PKPEDVLIASFPRSGSFWLRFLLAEI-MYGN--DKNF---VNFNSIEDIIPDLEYGPNRA-VYNGDK-RPTPSMEKVMMRNPRIILPRFYKSHEPMHRYRTMCPNCPGEWKRIIYIVRDGRDVMCSYYNFQKNLGHNTAMNKTFLEFLTEFSDPKDGPPIYPGVTWGDHVMSFFEVDDDPSSPQILWVRYEDLHTRPKKVLQDIFEFLEVTIPEDSILQQAIDASSKEKMKRKEEEGGAKLFDKHHAMRDQDFRVVRKAVTGGWAECFGS 317
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: A0A1I2VKB7_9FIRM (Sulfotransferase domain-containing protein n=1 Tax=Desulfallas arcticus DSM 17038 TaxID=1121424 RepID=A0A1I2VKB7_9FIRM) HSP 1 Score: 124 bits (312), Expect = 6.560e-30 Identity = 84/283 (29.68%), Postives = 139/283 (49.12%), Query Frame = 1
Query: 178 DVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFAPNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLK---ADIYPGFG-WADHVNSYLDLKGNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTSPVSKDIFNEQAYSTMFDLGYVTDEHW 1014
D F++SYPKSGN WMRFL+ + L ++P ++F ++E +PD+ Y + + R KSH+P+ P +++++++L+RDGRDV SYY+ +D +EF ++LK A FG W D++NS++ G S + ++YEDL R + +V ++ GL S E + A+ SSF+ M E+ +G + MF ++ + R GK G W + FT KD+F T+ L Y +++W
Sbjct: 36 DRFIVSYPKSGNTWMRFLVGNL-LSNEP--------VNFFNVEYLVPDM-YWNTDKHMHALPSPRYIKSHEPYDP--------------------------RYNKVVYLIRDGRDVAVSYYYHLKRENRMD---LEFSDYLKKFAAGKLDDFGTWGDNINSWMQNVGEQSNRFLMIRYEDLIRDAQAELFKVCQFLGLPKSIEQIDLAVQDSSFEKMAEHEKRTGK---ENMFKNTNQKIKFIRSGKVGSWRDMFTER-DKDLFKSCFGFTLVALKYEENQNW 275
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: UPI0018E833EC (sulfotransferase domain-containing protein n=1 Tax=Leptolyngbya sp. BL0902 TaxID=1115757 RepID=UPI0018E833EC) HSP 1 Score: 123 bits (309), Expect = 2.040e-29 Identity = 83/277 (29.96%), Postives = 138/277 (49.82%), Query Frame = 1
Query: 178 DVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFAPNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRL---GLGNLDPPNMEFEEFLKADIYPGFGWADHVNSYLDLKGNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTSPVSKDIFNEQAYSTMFDLGYV 999
D+F++SYPKSGN W+RF++A+ N ++ F++I+L +PD+ Y + K + R KSH+ ++ +++++VRD RDV+ SYYH+++ L P + ++FL I W DHV +L + NS D + ++YEDL + P +VA + GL S++ VQR++ SSFK MR E+ +G ++D + R+G+SGGW E +S + E+ S M + GY+
Sbjct: 32 DIFLVSYPKSGNTWLRFIVANL--------INSATDISFSNIDLIVPDI-YKVSAAKLRKISRPRILKSHEYL--------------------------DVRYGKVIYIVRDPRDVLLSYYHYKILRKKLSESHPLDDFAQDFLHGKIDKFGTWQDHVGGWLGARKNSQ-DFLLLRYEDLIKEPFLETKKVANFIGLNASDDAVQRSLELSSFKKMRELEKTTGSNSAALRGSRKDMFF--VREGRSGGWVESLPDVISAKVI-EKFQSGMVEAGYL 269
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: UPI00196525F7 (sulfotransferase domain-containing protein n=1 Tax=Amphritea pacifica TaxID=2811233 RepID=UPI00196525F7) HSP 1 Score: 119 bits (299), Expect = 3.800e-28 Identity = 81/257 (31.52%), Postives = 131/257 (50.97%), Query Frame = 1
Query: 175 SDVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFAPNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLKADIYPGF----GWADHVNSYLDLKGNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEE-ASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECF 930
+DV ++SYPKSGN WMRFL+ + +LY E+DF ++E +PD+ Y N + K R KSH+ F P ++ + +++VRD R V SYYHF G +D + +F E+LK + G+ W +HV S+ +K + + D + +KYED+ AP + + +V ++ G S+E V++A++ SSF+ MR KE SG ++ Q + + R G+ W+E F
Sbjct: 25 NDVMIVSYPKSGNTWMRFLIGN-YLYE---------ELDFINMENLIPDI-YVVNEKKLSKMKSPRIMKSHEYFDP--------------------------RYKKCIYIVRDPRSVAVSYYHFLKKYGRIDLDS-DFYEYLKVFVKGGYDNYAAWDEHVMSWYGIKKDKTEDFIFIKYEDMLAAPEKVLRDVLEFLGENVSDECVEKAVSSSSFEKMRLKESYQSGK---SEVLKQSNGALPFVRSGRKDEWKEYF 240
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: UPI0002AC1A6A (sulfotransferase domain-containing protein n=1 Tax=Synechocystis sp. PCC 7509 TaxID=927677 RepID=UPI0002AC1A6A) HSP 1 Score: 115 bits (289), Expect = 9.440e-27 Identity = 85/280 (30.36%), Postives = 133/280 (47.50%), Query Frame = 1
Query: 178 DVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFAPNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFL------KADIYPGFGWADHVNSYLDLKGNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTSPVSKDIFNEQAYSTMFDLGYV 999
D+F++SYPKSGN W+RFLLA+ Y + N F++ L +P + + ++ D+ + KSHQPF + +H++++LVRDG+DV SYY G + FE+FL K D Y W+DHVNS+L+ N + D + +KYEDL P ++ V K+ + ++V+ A+ SSF+SM++ E L +Q+ D S + R GK G E F + + T+ LGY+
Sbjct: 26 DIFLVSYPKSGNTWLRFLLAN---YLTDNQCN------FDNAHLLIPGIHF-TQKQSISSQDRLKFVKSHQPFTGD--------------------------YHKVIYLVRDGKDVAVSYYFHAKKFGIVSKEET-FEDFLIKFNAGKVDNYTA--WSDHVNSWLN---NPTKDFLLIKYEDLKLNPYFELIRVLKFAKIVIDTKLVKSAVEASSFESMKKLE----LERKEQIIKDLDPSIQFVRNGKIGEAEMYFNQELMTNFIAVHGL-TLKQLGYL 258
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: UPI000403C5B0 (sulfotransferase domain-containing protein n=1 Tax=Algoriphagus vanfongensis TaxID=426371 RepID=UPI000403C5B0) HSP 1 Score: 115 bits (287), Expect = 2.190e-26 Identity = 81/278 (29.14%), Postives = 137/278 (49.28%), Query Frame = 1
Query: 178 DVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFAPNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLKADI---YPGFG-WADHVNSYLDLKGNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTSPVSKDIFNEQAYSTMFDLGYV 999
DVF++SYPKSGN W+RFLL + + DF+++E +PD+ Y N + K + R KSH+ F PN + +++++VRD R V SYY++ L N P M+F+ FLK+ + +G W+++V S+L KGN+ + + +KYEDL ++ K+ + S+EV+ ++ SSF +M++ E+ + I ++ +++ RKG+ W++ F S D+ TM L YV
Sbjct: 30 DVFIVSYPKSGNTWVRFLLGNVL----------NLNYDFSNMESLIPDI-YVVNNNELLKQRRPRILKSHEYFHPN--------------------------YKKVIYIVRDPRSVAVSYYYY-LKKVNKIPSEMQFKPFLKSYLSGSLDSYGSWSENVESWLSTKGNNENEFILIKYEDLLLNTNLEFTKILKFIDIDVSDEVIANSVNNSSFINMKKNEKLNSGNI--KILNNSNENIAFVRKGEIDEWKDYFDSE-DLDLLYYHFGKTMKKLDYV 266
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Match: A0A6P0TIP3_9CYAN (Sulfotransfer_1 domain-containing protein n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TIP3_9CYAN) HSP 1 Score: 111 bits (278), Expect = 1.500e-24 Identity = 83/279 (29.75%), Postives = 132/279 (47.31%), Query Frame = 1
Query: 178 DVFVISYPKSGNFWMRFLLAHTWLYSQPGESNWHREMDFNSIELTMPDLEYGPNRRDYYKHDKFRAFKSHQPFAPNAVAGKCAETVGAMEDSQCACPNCPAKWHRILHLVRDGRDVMCSYYHFRLGLGNLDPPNMEFEEFLKA-----DIYPGFGWADHVNSYLDLKGNSSYDLMTVKYEDLHRAPLETMVEVAKWTGLKHSEEVVQRAITRSSFKSMRRKEEASGLLIFDQMFPQRDKSWRMTRKGKSGGWEECFTSPVSKDIFNEQAYSTMFDLGYV 999
D+F++SYPKSG+ W+RFL+ G + DF + L +PD+ Y P + + +F KSH F P ++ R++++VRD RDV SY+ F +L M F +F+ + I W +HVNSYL+ N DL+ V+YEDL + + ++GL ++ V A+ SSF M+R E+ + + F+Q+ D S + R+G+ G W+E F S + + IF T+ LGY+
Sbjct: 14 DIFLVSYPKSGSTWVRFLI---------GNYLSGNKYDFTNSHLIIPDVHYNPEQIGNLEKPRF--IKSHYSFVP--------------------------EYKRVIYIVRDVRDVAVSYF-FHARKYSLIDKEMRFRDFVLSVFGQDKIDTLLPWGNHVNSYLE---NHENDLLLVRYEDLIDDTYRELARILDFSGLPLQQDKVASAVESSSFSKMQRMEQ-NQIEQFEQLVNS-DHSIKFIRQGRVGVWQEWFDSELLQYIFKMHG-DTLEKLGYI 248 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15903.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig80.15903.1 >prot_C-linearis_contig80.15903.1 ID=prot_C-linearis_contig80.15903.1|Name=mRNA_C-linearis_contig80.15903.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=339bp ESSKAPTKSSDAAKAADKEPSKSSGLASSIAWVIVLAVSLVYHYANEQLVback to top mRNA from alignment at C-linearis_contig80:572926..574460- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig80.15903.1 ID=mRNA_C-linearis_contig80.15903.1|Name=mRNA_C-linearis_contig80.15903.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1535bp|location=Sequence derived from alignment at C-linearis_contig80:572926..574460- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig80:572926..574460- >mRNA_C-linearis_contig80.15903.1 ID=mRNA_C-linearis_contig80.15903.1|Name=mRNA_C-linearis_contig80.15903.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2034bp|location=Sequence derived from alignment at C-linearis_contig80:572926..574460- (Chordaria linearis ClinC8C monoicous)back to top |