mRNA_C-linearis_contig80.15877.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: A0A6H5JW76_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW76_9PHAE) HSP 1 Score: 1021 bits (2640), Expect = 0.000e+0 Identity = 504/614 (82.08%), Postives = 560/614 (91.21%), Query Frame = 3
Query: 321 MSGMQDKLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYEDLPNLYYANSLGSGICVESCPTTTDDSVLLCRYDRPDDVSDAEAVGAGYCNIQFETVEVVNFCVFSDKDEWDDTVQTDLEGYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGTKEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVES-AGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQ---IVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKHGAPMEVDSHPQ---SRNGANQYAFS 2141
M+GMQDKL P+FDGPV+ RKCTDIIF LAII++WITMT VGISS+ +GDV +LLAPTDYEGNLCG+D+GYEDL LYYAN++GSG+CV +CP+TTD + ++CRYDRPDD+ D EAV AGYCN Q+E+VEVVN+CVF+D D WDD Q+DL YLS FIAD+ITARAYVFGFGFGVA L AF+YIGLLQIPFLVAILVW+CVL VLLCLLGLGYGLWVTA DWDD GTKEDY+VTAAYVCAV+AWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIA+MP+IV WPV+ELVA+IAF+AIWMYYAAYTASLG+ITTKTVES GGYD+SYKVYDFDQQ+QYRGWFLLFCLFWTLNF+ AMGQ IVIAMSVASWYFAR+KSHVGSLTVV+SVGKTF FHIGTAAFG LIVAIVEMIRAILTYIQKKA++SGN V+QY+ACCC CCFWCLENC+R+INKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAV++LGEFVLN+MT+FV VT G Y MD+NIRS LNS+VGPTIMTAVLAYYTGKM+TGVYGMAITTILQCFVADEELFPP+QQFA+NDLR WVDKHGAPMEVDS P+ SR GANQYAFS
Sbjct: 1 MTGMQDKLTASPEFDGPVRERKCTDIIFMLAIIIMWITMTAVGISSIQQGDVRELLAPTDYEGNLCGFDDGYEDLGKLYYANNVGSGVCVGTCPSTTDLTEVVCRYDRPDDLDDEEAVLAGYCNPQYESVEVVNYCVFTDTDTWDDVEQSDLANYLSSFIADVITARAYVFGFGFGVATLVAFVYIGLLQIPFLVAILVWSCVLLVLLCLLGLGYGLWVTAVDWDDDGTKEDYIVTAAYVCAVVAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIASMPIIVFWPVVELVASIAFVAIWMYYAAYTASLGDITTKTVESDTGGYDLSYKVYDFDQQVQYRGWFLLFCLFWTLNFVAAMGQATAIVIAMSVASWYFARHKSHVGSLTVVSSVGKTFAFHIGTAAFGGLIVAIVEMIRAILTYIQKKAEKSGNKVVQYIACCCVCCFWCLENCLRFINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVTILGEFVLNVMTVFVCIVTTLGVYVAMDSNIRSQLNSLVGPTIMTAVLAYYTGKMVTGVYGMAITTILQCFVADEELFPPTQQFAENDLRGWVDKHGAPMEVDSGPRQQSSRTGANQYAFS 614
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: D7FRZ5_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRZ5_ECTSI) HSP 1 Score: 749 bits (1934), Expect = 1.260e-261 Identity = 390/512 (76.17%), Postives = 426/512 (83.20%), Query Frame = 3
Query: 618 SVLLCRYDRPDDVSDAEAVGAGYCNIQFETVEVVNFCVFSDKDEWDDTVQTDLEGYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGTKEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVES-AGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKHGAPMEVDSHPQSRN---GANQYAFS 2141
SV++CRYDRPDD+ + EAV AGYCN Q+E+VEVVN+CVF+D D WD+ Q+DL YLS FIAD+ITARAYVFGFGFGVA L AF+YIGLLQIPFLVAILVW+CVL VLLCLLGLGYGLWVTA DWDD GTKEDY+VTAAY CAV+AWVLAFLWTCLFCFLAKRI+LAIGVIKEAGRSIA+MP+IV WPV+ELVA+IAF+AIWMYYAAYTASLG+ITTKTVES GGYD+SYKVYDFDQQ+QYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFAR+KSHVGSLTVV+SVGKTF FHIGTAAFG LIVAIVE TAIFSTNFCTSARNAFYLIARNIARVAAVS+LGEFVLN+MTLFV VT G Y MD+NIRS LNS+VGPTIMTAVLAYYTGKM+TGVYGMAITTILQCFVADEELFPPSQQFA+NDLR WVDKHGAP EVDS P+ ++ GANQ+AFS
Sbjct: 33 SVVICRYDRPDDLDNEEAVLAGYCNPQYESVEVVNYCVFTDTDIWDNVEQSDLANYLSSFIADVITARAYVFGFGFGVATLVAFVYIGLLQIPFLVAILVWSCVLLVLLCLLGLGYGLWVTAVDWDDDGTKEDYIVTAAYACAVVAWVLAFLWTCLFCFLAKRIALAIGVIKEAGRSIASMPIIVFWPVVELVASIAFVAIWMYYAAYTASLGDITTKTVESDTGGYDLSYKVYDFDQQVQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARHKSHVGSLTVVSSVGKTFTFHIGTAAFGGLIVAIVE-------------------------------------------------TAIFSTNFCTSARNAFYLIARNIARVAAVSILGEFVLNVMTLFVCVVTTLGVYVAMDSNIRSQLNSLVGPTIMTAVLAYYTGKMVTGVYGMAITTILQCFVADEELFPPSQQFAENDLRGWVDKHGAPTEVDSGPRQQSSGTGANQFAFS 495
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA) HSP 1 Score: 508 bits (1309), Expect = 2.140e-165 Identity = 269/631 (42.63%), Postives = 390/631 (61.81%), Query Frame = 3
Query: 339 KLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYEDLPNLYYANSLGSGICVESCPTTTDDSVLL------------------CRYDRPDDVSDAEAV---------GAGYCNIQFETVEVVNFCVFSDKDEWDDTVQTDLE-GYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDW--DDAGTKEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVESAGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKHGAPMEVDS-------HPQSRNG 2120
KL+ P+FDGPV+ RKCTD +F L ++ WI MT +GI +V G+ +L+ DY+G +CG D G E L +YY G+G+CV CP TD + L C+ +D V G G C Q E+V+V+N C+F+D D V + + Y+ +F+ADI TAR ++ GFGFG +++ F+Y LL++P +VAI+ W +LAV+ +GYGL+ +W D D +T A + + +VLA L+ CL F+ +RI LA ++KEA R+I +P ++L PV+E V + F ++Y Y AS+G+ +T TV G +V K + ++Q GW+LLFCLFWT FI AMGQIV+A++V ++F R+KS +GS T ++ +H+GTAAFG+LI+AI++MIRAI+ + QKKAK SGN + QY CCC CCFWCL+ C+++INKNAY+QTA+FST FC S + AF+LIARNI RV AVS++ EF++ IM L + T+A Y G+DA I ++L+S VGPTI VLAY + ++ M TILQCF+ADEE++ P++++ADNDL+++V+ HGAP + HP + NG
Sbjct: 8 KLQAPPNFDGPVK-RKCTDTLFMLVLVCCWIAMTVIGIKAVQTGNPDRLVNGIDYQGRICGVDAGVETLTKMYYIRFDGTGVCVADCPAATDLNTLYTCTTPDAAFANGGADQLNCKGADAQQCADLTGVTDPATFSGGGDGACMYQIESVDVLNHCLFTDPAIADAFVSLNSQMSYMQQFLADIYTARNWILGFGFGFSLVMGFVYCLLLRVPGVVAIMTWGSILAVIALFAAVGYGLYTKGDEWAADTTNQHTDVQITIARIFGIAGYVLAGLFACLALFMCRRIRLATSIMKEAARAIGKIPAMILMPVVEAVGLVLFFVPLVFYGVYVASMGDFSTTTV---AGLEV--KTVTYGSEVQGMGWYLLFCLFWTTQFIIAMGQIVVALAVVKYFFTRDKSTLGSGTFFKAMKDGMWYHMGTAAFGSLIIAIIQMIRAIIAWFQKKAKASGNKIAQYALCCCQCCFWCLQKCMQFINKNAYIQTALFSTGFCKSGKEAFFLIARNIVRVGAVSMVSEFMIIIMKLVICLATMAATYLGLDATIGNELHSFVGPTIFVGVLAYLVASVFAELFSMTTATILQCFIADEEMYSPAERYADNDLKDFVNTHGAPKRLRKGSPAELPHPVALNG 632
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: A0A6V1T854_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T854_HETAK) HSP 1 Score: 470 bits (1210), Expect = 2.680e-151 Identity = 254/602 (42.19%), Postives = 366/602 (60.80%), Query Frame = 3
Query: 309 LGGRMSGMQDKLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYEDLPNLYYANSLGSGICVESCPTTTDDSVLLCRYDR--PDDV---SDAEAV--GAGYCNIQFETVEVVNFCVFSDKDEWDDTVQ-TDLEGYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGTKEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVESAGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKHGAPME 2090
+GG + D++ F P + RKCTD +F L +I W MT +G S+ +GD+ Y+G++CG D G EDLP LYY + +G+CVESCP T + +C D PDDV S A V G GYC ++E+ ++ CVFSD D + D I+DI T + GFG G+A + F+Y+ L++IP+++ ILVW +L + L GLGY ++ A W + GT + A Y CA I VLA LW C CFL K+I LA +++EA R + AMP + LWP+++ A + F+A + Y Y AS G TT E GY+ ++ +DF + +Y+ FL+F LFWT FI A+GQI +A+++A WYF +KS +G+ T V +V + FH+GTAAFG+LI+A++ IRA L Y +KKAK S N V + + C C CCFWCLE C+R++NKNAY++TA+ ST FC S +F L+ARN+ R+ AV+++ + VL IM F+V VT+ GAY +D S+LNS+V P ++ AVLA+ ++GM+I TIL CFV DEE FP ++FA++ L +W++K G E
Sbjct: 1 MGGSTNNQSDEMV----FMSPEKNRKCTDFLFALLLIASWAAMTYLGYQSMQDGDITVFTTGMQYDGSVCGVDSGVEDLPYLYYVRTDLTGVCVESCPDETSLTNYICLPDSAIPDDVDTSSKASLVDNGDGYCMFEYESKAILGRCVFSDTDVLSEFFSDNDYAEMAEEAISDIKTTKHLCLGFGIGMAAVLGFIYLYLVRIPWIMNILVWGSILVIQAALAGLGYLMYAQAQTWTEDGTHSSNAIYALYGCACIFGVLAVLWLCAICFLRKQIELAEDIVEEAARPVTAMPAMFLWPLLQTAATLVFVAFFFVYLMYEASTGMTTTTDDE---GYE--HRAFDFTTEQKYKMLFLVFELFWTTQFIVAVGQIALALAIAQWYFVHDKSEIGTGTFVVAVFEASWFHMGTAAFGSLILAVILSIRAFLAYCEKKAKASHNKVAEAVICACQCCFWCLEKCVRFVNKNAYIETAVRSTGFCASCVESFKLVARNVLRLGAVTVIADAVLLIMQAFIVLVTVFGAYEYLDYKYASELNSVVAPLVLVAVLAWAVATQFKEIFGMSILTILHCFVVDEETFPAGKRFAEHALADWLNKFGEKGE 593
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI) HSP 1 Score: 458 bits (1178), Expect = 8.080e-146 Identity = 249/626 (39.78%), Postives = 373/626 (59.58%), Query Frame = 3
Query: 339 KLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYEDLPNLYYANSLGSGICVESCPTTTD-DSVLLCR-----------YDRPDDVSDAEAV-----------------GAGYCNIQFETVEVVNFCVFSDKDEWDDTVQTDLE-GYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGTKEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVESAGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKHGAPMEVDSH--PQSRNG 2120
KL D +G R+CTD++F L +IL W+ MT +G+ ++ G+ LL DY+G +CG D+G +D LYY G+G+CVE CPT T+ D + C YD DD + A GAG C Q E+V+ V CVFS+ + D V + YL +D+ AR ++FGFGF + + F Y+G+LQ+P LV +++W + V L+ +G+G + DW+ G D V + V +A+ AFL+ CL FL K+I+LA G+IKE+ R+I + ++ P+++ A +AF+ W+ Y+ YTAS+ +ITT+ V AG ++ K +++ +++ RGW+LLF FWT F+ AMGQIV+A++V +YF R+ V + T S+ + FH GTAAFG+LI+AI++ IRA+LTY+QKK ++SG+ Q + CC +C FWCLE C+++INKNAY+Q AIFST+FC S++NAF+LIARN+ RV AV+++ +FV+ IM L + T Y + ++ DL S +GP V+AYY + GM TILQCF+ADEE+F ++A NDL++W+D HG E S P+ + G
Sbjct: 17 KLAAPDDIEGGAD-RRCTDVLFMLVLILAWLAMTYLGVDGISNGNPDLLLNGIDYDGRICGVDDGVKDKSKLYYIRFDGTGVCVEECPTVTNFDHLWGCTDEFSGFTVDEGYDCSDDPLECAAKADVDPTGAEDGGFGGGDGAGVCMYQVESVDFVGRCVFSEPEVLDKFVDVGGDVAYLQEAASDVYAARGWIFGFGFCFSTILGFFYLGMLQLPGLVCMMIWGSIACVFFILVAMGFGFVSLSEDWEGDGEHTDTQVMGSRVTGYLAYGCAFLFLCLIVFLRKQIALANGIIKESVRAIGTVKMMFFMPLLQCAAIVAFLVPWVVYSVYTASMADITTEEV--AG---LTVKSFEYSDEVEKRGWYLLFVFFWTTQFVVAMGQIVVALTVVKYYFTRDVETVNNGTFWKSLKEGLRFHTGTAAFGSLIIAIIKTIRAMLTYMQKKLQKSGSKAAQAVLCCLSCFFWCLEKCVKFINKNAYIQVAIFSTSFCRSSKNAFWLIARNLGRVGAVTVVTDFVVFIMKLVIGLGTAGATYVFLQNFMKDDLYSPMGPVFFAGVMAYYVASSFAALLGMTTLTILQCFIADEEMFEGEDRYARNDLKDWLDAHGVNEEPSSPRTPKKKGG 636
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: A0A7S2XXR1_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXR1_9STRA) HSP 1 Score: 442 bits (1137), Expect = 2.130e-140 Identity = 236/584 (40.41%), Postives = 353/584 (60.45%), Query Frame = 3
Query: 336 DKLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYEDLPNLYYANSLGSGICVESCPT-------TTDDSVLLCRYDRPDDVSDAEAVGAGYCNIQFETVEVVNFCVFSDKDEWD--DTVQTDLEGYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGT--KEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVESAGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDL 2054
+K G F GP RKCTDI+F + IIL WI +T +G S GD L+A DY G +CG+ G ED N+YY +S +G+CV +CP + DD L+C+ + + V +G C ++ + C+F++ D + D L F ADI TAR YVFGFGF +A++ FLY L +P +++ VW+ ++ + L L LG L V +W+D +EDY + V I +A ++ CL FL KRI LA+G+IKEAGRS+ MP I+ +P++++ + FM W+++ YTAS+G+I K + V+YK Y + +++ RGW+LLF FWT FI A+GQIV+A +VA WYF R+K VG+ TV ++ + +H+GTAAFG+L++AI++MIR IL +QK+A+ + Q + C C+E C++++N++AY+QTAIFST+FC SA+N F+L+ RNIAR +AV L+ E ++ I +F+ + +Y M+A I DLNS+V PT+M +LA+ M V+ MAI T+ QCF+ADEE+F Q+FA +DL
Sbjct: 17 NKKLSGDGFQGPTDQRKCTDILFLILIILAWIILTAIGSDSCVHGDPWTLIAQVDYGGRVCGYSSGVEDSENIYYLDSSLNGVCVNTCPPEDVLPPYSIDD--LICKENVDTSRTFVGLVASGDCQFKYASTNRFGICIFTNSSMNDVLNVYAGDQTSALEEFAADIYTARGYVFGFGFVIAIVMGFLYTWFLHLPGVISTFVWSTIILIFLLKLALGAWLIVKGGEWEDEDPQMREDYEILGLKVLGGIVIAVAVIYACLIIFLRKRIQLAVGIIKEAGRSLMDMPAIIFFPLLQVFGLVLFMVPWVFFVIYTASMGDIEVKQMNG-----VNYKDYVYSAEVEERGWYLLFMWFWTTQFIIALGQIVLAAAVAKWYFTRDKKEVGTRTVFWAIKVSLFYHVGTAAFGSLVIAIIKMIRFILMQMQKQAQXXXXKLAQAVLCXXXXXXXCVEKCMKFVNRHAYIQTAIFSTSFCVSAKNGFFLLLRNIARASAVELVSEIIILIGKIFISLMATFLSYATMEAVISDDLNSLVAPTVMVFILAWVVAIMFMMVFHMAIDTVFQCFIADEEMFEGDQRFAQHDL 593
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: A0A6V2WBV2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WBV2_HETAK) HSP 1 Score: 442 bits (1136), Expect = 4.220e-140 Identity = 244/591 (41.29%), Postives = 345/591 (58.38%), Query Frame = 3
Query: 327 GMQDKLRVGPD-FDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYEDLPNLYYANSLGSGICVESCPTTTDDSVLLCRYDRPDDVS----DAEAVGAGYCNIQFETVEVVNFCVFSDKDEWDDTVQTDLEGYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGTKE--DYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVESAGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFAR-NKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKH 2075
G + K G D ++GP RKCTD++F +AI+ W+ MT VG+ S+ GD L DY GN+CG Y D +YY GSG+CV +CP+TTD SVL D D S D+ V GYC Q+ + +++N C+F + T Y F+ D+ A+ YV G G G A+ A +Y+ LL++P V ++VW + V L L LG GL+ A + +T V + LA ++ C+ L RI+LA+ ++KEA +I M L++ +P++++V + F+ W+YYA YTASLG +T T S GY V K + F ++YR WFLLFC FWT FI A+GQ+V+AMSV WYF + H GS VV S+ T +H GTAAFG+LI+AI++++RA L Y+QKK K + N L C CC WC E C++++NKNAY+ TA+FS FC +A+ AF LIARNIARVAAVSL+ +F++ I LF+ Y+ ++ + L S++ PT MTA LAY K+ M I+TILQCF+ADEE+F + FA L+ ++DKH
Sbjct: 19 GERLKAPAGRDEYEGPTANRKCTDVLFFIAIVATWVCMTIVGVDSIQNGDYAVLTNGIDYNGNICGTGN-YSDYSKMYYVGYSGSGVCVSACPSTTDKSVLYACVDDSDIPSAYTTDSLKVAGGYCQYQYASYDILNRCIFQNSTLASLVSDTSQWSYAEDFVGDVWAAKDYVLGIGLGFAIALAIVYLALLRLPGFVVLMVWGSIWLVFLLLAALGGGLFYFGYTQSQAASSSYTSTEITCMEVFGGVFGALALVFVCVVLCLRDRITLAVDIMKEAAHAIMDMTLLLFFPLVKVVGFLLFLLPWLYYAVYTASLGSFSTYTTSS--GYSV--KSWSFSSDVEYRLWFLLFCFFWTTQFIIAVGQLVVAMSVGKWYFTHASGKHAGSSEVVKSMVATLWYHTGTAAFGSLIIAIIQLVRAFLAYVQKKTKAANNKFADALLCVLQCCLWCFEKCMKFLNKNAYIHTALFSDKFCHAAKEAFLLIARNIARVAAVSLVSQFIMIIAELFMTLGAATLCYFLLEIYMADQLTSLLYPTAMTAALAYCVSKIFVETLSMVISTILQCFIADEEMF--NGHFAKGSLKEYIDKH 602
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: A0A7R9YAE8_9STRA (Choline transporter-like protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAE8_9STRA) HSP 1 Score: 439 bits (1128), Expect = 1.400e-137 Identity = 238/620 (38.39%), Postives = 370/620 (59.68%), Query Frame = 3
Query: 339 KLRVGPDFDGPVQ--ARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYEDLPNLYYANSLGSGICVESCP-------------------TTTDDSV------------LLCRYDRPDDVSDAEAVGAGYCNIQFETVEVVNFCVFSDKDEWDDTVQTDLEG--YLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGTKEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTVESAGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKHGAPMEV 2093
+L+ P+F GP +RK TD F L II WI MT +GI ++T G++ +LL D EG +CG D +DLP+L Y NS +G+C++ CP +TT V L + A G C +E+ EV+N CVF + DE D + DL+ Y+ F++D++ R +FGFGF VA++ FL++ +L+IP L A ++W+ VL +L+ L+ G L T ++W+D +++ Y V I V AFL+ C+ + ++I+LAIG++KEA +++ AM IV P ++ FM W++Y Y ASLG+ K + G V+ + Y+FD ++Q GW++LF WT FI A+G + IA +VA+W+F R+KS+V S T SVG FH GTAAFGALI+AIV++IRA++TY+QKKAKESGN V +Y+ C C CCFWC E C++++++NAY+QTAIF FC+ A++AF+LI RN RV A++ +G FV++I +F+V++ AG+++ ++ ++N + P + +L+YYT M +Y +A+ T+LQCF+ADEE+F FA + +++++ G +
Sbjct: 97 QLKAPPNFAGPANKDSRKTTDCFFLLLIIAGWIAMTAIGIDAITRGNLEELLNGVDSEGRICGVDSAVDDLPDLIYVNSKLNGVCIKDCPDEDVLGSSNQGLDAVDFINSTTSAQVYSIDGDGLSFGGLAACLSYSGSATFASLFEEGACVPLWESREVINRCVFKN-DEVRDVILADLDDNEYVRNFVSDLLVTRRVIFGFGFVVALVLGFLFLYILEIPCLAAFVIWSMVLGILVVLVICGALLIRTGNEWEDDDSRQTYEVRGIRAIGYIFAVGAFLYFCVIVCMREQINLAIGLVKEAAKAMQAMRTIVFIPFLQAFGFGLFMVPWVFYILYLASLGDQKVKQFD-VNGVAVTAREYEFDNEVQRSGWYMLFIFMWTSQFIIAVGHLTIATAVATWFFTRDKSYVHSGTPFRSVGLVLRFHTGTAAFGALILAIVQIIRAVITYMQKKAKESGNKVAEYILCLCQCCFWCFEKCVKFLSQNAYIQTAIFGKGFCSGAKDAFFLILRNFLRVGALTAVGGFVMSIGKIFIVSIATAGSFFLIEEIYGDEINGLFLPVLFVFILSYYTADMFLDIYEIAMMTVLQCFIADEEMFGSENGFASDSIKSYIHDSGKSKDT 714
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: B7FYN0_PHATC (Choline transporter-like protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYN0_PHATC) HSP 1 Score: 434 bits (1116), Expect = 1.320e-136 Identity = 241/647 (37.25%), Postives = 371/647 (57.34%), Query Frame = 3
Query: 336 DKLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEGYE--DLPNLYYANSLGSGICVESCPTTTD-------------------------------DSVLLCRYDRPDD-------------------VSDAEAVGAGYCNIQFETVEVVNFCVFSDKDEW--DDTVQT---------DLEGYLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDA--GTKEDYVVTAAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTKTV--ESAGGYDVSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPSQQFADNDLRNWVDKH 2075
DKL DFDGP + R CTDI+ LA+I +W+ MTGVGI +VT GD +L P DY+GN+CG D G + + P L Y NS G+CV+ CP T D + + Y D VS+ G GY ++ E++ C + + ++ V + D + ++ AD+ AR YV GFGFGV++L +F+YI L+++P ++ +VW+ + + GY WV ASDW D T + + A +++ +V+ + L C L +I AIG +K+AG+++ M +I+L PV++ V +AF+ ++ YY A ASLG+I+ V + G +++++ Y+FD ++ GW+LLFCLFWT NFI A+G +++A+SV+ WYF +NK +GS TV+ S+ +T +H GT A+G+LI+A+V+MIRA++ QK AK++ + + + CCC C F CLE C++++NKNAY+QTAIFST FC S R AFYLI RN AR+AA+S + VL + LF+ AVT + +YY + +I ++L+S+ GP + +++Y+ V+ MAI+TIL C +ADEE+F + + L+NWVDKH
Sbjct: 8 DKLVAPADFDGPTKDRHCTDILMLLALIAMWVAMTGVGIYAVTNGDYRLVLYPLDYDGNVCGTDFGLDMTEFPYLLYVNSYTGGVCVKECPDLTGKVSDNLTDIGTLVTYNGVFQADNGSLSELPLDYIQVGDYSSSTDAISCTDDTCFPQQSPSLSWVSNGVNQGFGYAYYAADSYELLWRCYLTTEASARIEELVSSQSGGLQIAGDASQFFTKLYADLWVARKYVLGFGFGVSVLVSFVYIFLMRLPLILTAMVWSSIFISIALFFVSGYYAWVFASDWSDEVPQTVSNTTINATTAASIVLYVIGGIMILLACCLRSQIQTAIGCVKQAGKAVNCMIIILLVPVLQAVGFLAFLIVFGYYGANLASLGKISVVEVPLDGTGTQEIAFRKYEFDDFVENCGWYLLFCLFWTSNFIVAVGDMIVAISVSKWYFTKNKVTIGSWTVLTSIWQTLFYHAGTCAYGSLILAVVQMIRAMIARAQKAAKDANSKIAGAILCCCQCFFCCLECCLKFLNKNAYIQTAIFSTAFCKSCRQAFYLIFRNAARIAAISYVSGAVLIVGKLFISAVTTSVSYYFIAEDIENELHSVGGPVAIVFLISYWVSDFFMDVFDMAISTILHCVIADEEMFDGEAGYTEKSLKNWVDKH 654
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Match: A0A7S4J5U8_9STRA (Choline transporter-like protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5U8_9STRA) HSP 1 Score: 426 bits (1095), Expect = 5.150e-133 Identity = 255/677 (37.67%), Postives = 375/677 (55.39%), Query Frame = 3
Query: 315 GRMSGMQDKLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGDVGKLLAPTDYEGNLCGWDEG---YEDLPNLYYANSLGSGICVESCPTTTD------------------------DSVLLCRYD-RPDDVSDAEAVGA-----------------------GYCNIQFETVEVVNFCV--------FSDKDEWDDTVQ--TDLEG-------------YLSRFIADIITARAYVFGFGFGVAMLTAFLYIGLLQIPFLVAILVWTCVLAVLLCLLGLGYGLWVTASDWDDAGTKE----DYVVT-------AAYVCAVIAWVLAFLWTCLFCFLAKRISLAIGVIKEAGRSIAAMPLIVLWPVIELVAAIAFMAIWMYYAAYTASLGEITTK--TVESAGGYD----VSYKVYDFDQQIQYRGWFLLFCLFWTLNFITAMGQIVIAMSVASWYFARNKSHVGSLTVVASVGKTFVFHIGTAAFGALIVAIVEMIRAILTYIQKKAKESGNSVLQYLACCCACCFWCLENCIRYINKNAYVQTAIFSTNFCTSARNAFYLIARNIARVAAVSLLGEFVLNIMTLFVVAVTIAGAYYGMDANIRSDLNSIVGPTIMTAVLAYYTGKMITGVYGMAITTILQCFVADEELFPPS-QQFADNDLRNWVD 2069
G+ S +KL+ PDF GPVQ R+CTD++ +L ++L W MTG+G +V+ GD ++ P DY+GN+CG + G ED P LYY NS +G+CV+ CP+ D D++ + Y PD S E G GY +TVEV+ C+ + +W VQ T+ G + AD+ TAR ++FGFGFGV++ F+Y L+IP ++ +VW +L + G+GY S ++ A TKE D VV A + A + W + L L C L K+I LA+G IKEA RSI+AMPLI+L+PV++ +AFMA++ YY Y ASLGE+ T T++S G + +S + ++++ ++ WFLLF +WT FI A+G+IV+AMSV+ WYFARNK+ VGS TV+ S+ + H+GTAAFGAL++ IV+MIR+IL +QKKA++ V Q L CCC CC WCLE +R++NKNAY+QTAIF T+FC SAR F+L+ RN R++A++ + V+ + LF+ T AY+ D + ++L+S +GP + ++ + I+TIL CFVADEE+F + + +A+ LRNW+D
Sbjct: 2 GQDSEGTEKLQAPPDFSGPVQNRRCTDVLCSLLLVLTWAAMTGLGFYAVSNGDYRVIVYPMDYDGNICGTNYGNIDMEDYPFLYYVNSYSAGVCVKECPSIEDLTDVYTAITYGGIYQVTANATLAPDAIQMADYSYSPDAKSCTEGAGGISTCYPFDNARLSWTAPGFNRGFGYAYYALDTVEVLKRCIPNLDAIEKLKTETQWSVEVQNKTNATGEADWLQIVDEGGSFWGNLFADLWTARYWIFGFGFGVSLAVGFVYAFFLRIPGVLPFMVWGSLLLTIGIFFGVGY------SSYNYASTKEAESIDLVVLSSEQSVHALRIAAYVLWGIGVLCLVLLCALRKQIILAMGCIKEASRSISAMPLIILFPVLQAGGFVAFMAVFFYYGVYLASLGEMDTSEYTIDSPFGDEFDTTISVRNFEYNTFVERSAWFLLFNFYWTSQFILAIGKIVVAMSVSKWYFARNKTSVGSTTVIKSICSSIWHHMGTAAFGALLITIVKMIRSILIKLQKKAEQMNRQVAQVLFCCCNCCLWCLEKFLRFLNKNAYIQTAIFGTSFCRSAREGFFLVMRNAGRISAITFVSWGVIFVGKLFITTFTCGIAYFAFDEYLENELHSPIGPIVFIGLIGFXXXXXXXXXXXXXISTILHCFVADEEMFGGTGEMYAEGKLRNWID 672 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig80.15877.1 >prot_C-linearis_contig80.15877.1 ID=prot_C-linearis_contig80.15877.1|Name=mRNA_C-linearis_contig80.15877.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=608bp MSGMQDKLRVGPDFDGPVQARKCTDIIFTLAIILLWITMTGVGISSVTEGback to top mRNA from alignment at C-linearis_contig80:388302..395361+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig80.15877.1 ID=mRNA_C-linearis_contig80.15877.1|Name=mRNA_C-linearis_contig80.15877.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7060bp|location=Sequence derived from alignment at C-linearis_contig80:388302..395361+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig80:388302..395361+ >mRNA_C-linearis_contig80.15877.1 ID=mRNA_C-linearis_contig80.15877.1|Name=mRNA_C-linearis_contig80.15877.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3648bp|location=Sequence derived from alignment at C-linearis_contig80:388302..395361+ (Chordaria linearis ClinC8C monoicous)back to top |