mRNA_C-linearis_contig80.15867.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig80.15867.1
Unique NamemRNA_C-linearis_contig80.15867.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A6H5KFS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS4_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 2.720e-173
Identity = 248/271 (91.51%), Postives = 255/271 (94.10%), Query Frame = 2
Query:    2 QDRVMQLIRLDRGLTGELLLRHPEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARCSHGLCLMPLAGPPR 814
            QDRV+QLIRLDR LTGELLLRHPEK SV SVV QL GRRDLQHWYLGLLF RSPE YGAQEYAP+HALQVSLLAEFA PFERGRPPAY SAFLRFLR +GFAPLEAALRECGKRRPPLYDEMA+ILGRMGDTRRALTILLEEV SVPRAIEFVEAHDKDLWYRLIEHSLK E FLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESC ASVKTDLLRRLRRLNQGQRRATRV+A ARC +G+CLMPLAGPPR
Sbjct:   97 QDRVLQLIRLDRELTGELLLRHPEKFSVSSVVAQLNGRRDLQHWYLGLLFDRSPEMYGAQEYAPYHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCCASVKTDLLRRLRRLNQGQRRATRVDADARCCYGMCLMPLAGPPR 367          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: D7FS06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS06_ECTSI)

HSP 1 Score: 412 bits (1060), Expect = 3.450e-135
Identity = 206/226 (91.15%), Postives = 210/226 (92.92%), Query Frame = 2
Query:    2 QDRVMQLIRLDRGLTGELLLRHPEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESC 679
            QDRV+QLIRLDR LTGELLLRHPEK SV SVV QLKGRRDLQHWYLGLLF RSPE YGAQEYAPFHALQVSLLAEFA PFERGRPPAY SAFLRFLR +GFAPLEAALRECGKRRPPLYDEMA+ILGRMGDTRRALTILLEEV SVPRAIEFVEAHDKDLWYRLIEHSLK E FLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQV +   C
Sbjct:  675 QDRVLQLIRLDRELTGELLLRHPEKFSVSSVVSQLKGRRDLQHWYLGLLFDRSPEMYGAQEYAPFHALQVSLLAEFAPPFERGRPPAYTSAFLRFLRPTGFAPLEAALRECGKRRPPLYDEMAYILGRMGDTRRALTILLEEVGSVPRAIEFVEAHDKDLWYRLIEHSLKSETFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVRIVWCC 900          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A836CBT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT2_9STRA)

HSP 1 Score: 218 bits (555), Expect = 7.450e-61
Identity = 125/244 (51.23%), Postives = 148/244 (60.66%), Query Frame = 2
Query:    8 RVMQLIRLDRGLTGELLLRHPEKLSVPSVVGQLKGRRDL------------QHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVY----------------------------------DVDLARLVAEIPKGM 601
            RV++LI+L +   G LL+RH +KL    VV QL+GRRDL            QHWYL LLF ++PE Y   E+A FHALQVSL A+FA PF+  RPP Y+S FLRFLR S FAPLEAAL EC KRRPPL+DEM            AL++LLEEV    RAIEFV AHDKDLWYRLI++SL++E FL GLLDHAGVY                                  DVDLA L+  +P+GM
Sbjct: 1077 RVLELIQLSQADAGALLVRHVDKLPAAQVVPQLRGRRDLXXXXXXXXXXXXQHWYLHLLFTQAPELYNTPEHAQFHALQVSLYAQFAPPFQPRRPPPYDSDFLRFLRGSAFAPLEAALTECEKRRPPLWDEMV-----------ALSVLLEEVDCARRAIEFVGAHDKDLWYRLIDYSLRNERFLGGLLDHAGVYTLVLRDTYXXXXXXXXXXXXXXXXXXXXXXXXXXDVDLAGLIRGVPEGM 1309          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: W7TUN1_9STRA (Vacuolar protein sorting-associated protein 41 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUN1_9STRA)

HSP 1 Score: 184 bits (466), Expect = 5.940e-49
Identity = 114/269 (42.38%), Postives = 142/269 (52.79%), Query Frame = 2
Query:  131 WYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPF----ERGRP-------------------------------PAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLAR-LVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARCSHGLCLMPLAGPPRGAPRP 829
            WYL LLF R P+ Y   E+A FH LQV L A  A PF    ER                                  PAY S  L FL  S    LE AL  C +R+PPLYDE+ +IL R+G  + AL +LL E+ SV RAIEFV+ HDK LW  L  HSL+   FL+GLL HAG Y+VDLAR LV +IP  M I GL+ K++ I++ Y F+ +++E      + D +   RR +  QRRA RV+       G CL P AGP    P P
Sbjct:  932 WYLDLLFRRLPDHYNHPEFAQFHVLQVELYAAAAPPFCPAPERSHTNAKDEDTVKIKDSGAHGSGENASDEEDGVAEPAYTSDLLSFLMWSNHVRLETALAACERRQPPLYDEIVYILSRIGHNKEALRLLLVEIRSVRRAIEFVDRHDKGLWRELTAHSLQHPRFLAGLLRHAGNYNVDLARSLVEDIPDAMRIRGLQPKLLNIVASYRFERTLHEESRRVAEHDYVAATRRFHHAQRRAVRVDIPQSRCQG-CLEPFAGPSPAKPPP 1199          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A7S0EHW5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EHW5_9CRYP)

HSP 1 Score: 172 bits (436), Expect = 1.460e-47
Identity = 106/256 (41.41%), Postives = 152/256 (59.38%), Query Frame = 2
Query:    8 RVMQLIRLDRGLTGELLLRHPEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHD-KDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARC 772
            +V  L + D     ++L+  P+++S   VV QL+ +R + H YL  LF + P   GA     FH LQ+ L A+F             S  L FL +S    LE AL+ C KR   LY EM F+LGRMG+T++AL +LLE++  VP+AIEF +A D ++LW  LI   L     +  LL   G + VD  ++V+ IP GM I G+R+K++KIISDYH Q+S+ E C   +++D++   RRLN+ QRRATR++A  RC
Sbjct:   99 KVASLAKFDEDRAVKMLVGCPDQISPSYVVEQLRDKRKVLHAYLDALFDKDPRA-GAN----FHELQIELYADFD-----------KSKLLPFLSQSNNYRLENALKLCEKRM--LYPEMVFVLGRMGNTQQALRLLLEQMQDVPKAIEFCQAQDDEELWESLISFCLSRPNLVGPLLQDIGAH-VDPVKVVSRIPVGMKIDGIREKLIKIISDYHLQMSLREGCERILRSDVVLLERRLNKAQRRATRIDARTRC 335          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A485LHE2_9STRA (Aste57867_21416 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHE2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.820e-46
Identity = 102/268 (38.06%), Postives = 160/268 (59.70%), Query Frame = 2
Query:    2 QDRVMQLIRLDRGLTGELLLRH--PEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARCSHGLCLMPL 799
            Q++V+ L+ +DR     +L+     ++L V ++V QL+ +R+L H YL  LF      Y  + YA  H LQVSL AEFA        P Y    L+FL+ S F PLE A + C +R PPL+D M FILGRMG  ++AL  ++ ++ +V +AI+FV+ +D +LW  LIE SL ++ ++  LL++A  + +D  +++ +IP+ M I GL+ KV +II++Y  Q+S+   C+   +TD    LRRL   +R+A RV    +C  G+C   +
Sbjct:  612 QNKVVNLMMIDRESALRMLVHQIKSDQLKVSAIVKQLEHKRELLHEYLHNLFVHRLADYNTESYASLHELQVSLYAEFA--------PNY---LLKFLQTSAFVPLERAYKFCSERSPPLWDAMIFILGRMGQHKKALDFIMTQLQNVKQAIQFVQDNDDELWDYLIEISLTNKEYIEELLEYACDHKIDPIKVMRKIPEDMEIAGLKTKVQQIIANYRIQLSLCHGCTKVFETDRADLLRRLITNRRKARRVTPQTQC--GICFQQM 866          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A1V9YI15_9STRA (Vacuolar protein sorting-associated protein 41 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YI15_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.840e-46
Identity = 101/275 (36.73%), Postives = 163/275 (59.27%), Query Frame = 2
Query:    2 QDRVMQLIRLDRGLTGELLLRH--PEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAE----IPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARCSHGLCLMPLAGP 808
            Q++V+ L+ +DR     +L+     ++L V S+V QL+ +R+L H YL  LF      Y  + Y+  H LQ+SL AEFA  F            LRFL+ S F PLE A + C +R PPL+D M FILGRMG  ++AL  ++ ++ +V +AI+FV+ +D  LW  LIE SL  + F++ LL++A  + +D  +++ +    IP+ M I GL+ KV +II++Y  Q+++ + C+   ++D +  LRRL   +++  RV    +C  G+CL+P+  P
Sbjct:  605 QNKVVNLMLIDRDAAIRMLVHQIKSDELKVHSIVKQLEHKRELLHEYLHNLFVHRLVDYNTERYSSLHELQISLYAEFAPHF-----------LLRFLQTSSFVPLEKAYKFCSERSPPLWDAMVFILGRMGQHKKALDFIMTQLKNVKQAIQFVQDNDNALWDYLIEISLTHKDFMAELLEYACEHKIDPIKVIKKVQDAIPEDMEITGLKSKVQQIITNYRIQMTLYQGCTKVFESDRIDLLRRLIAARKKPRRVTMQTQC--GICLLPIKQP 866          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A067BPI1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BPI1_SAPPC)

HSP 1 Score: 174 bits (441), Expect = 1.030e-45
Identity = 100/268 (37.31%), Postives = 156/268 (58.21%), Query Frame = 2
Query:    2 QDRVMQLIRLDRGLTGELLLRH--PEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARCSHGLCLMPL 799
            Q++V+ L+ +DR     +L+     ++L V ++V QL+ +R+L H YL  LF      Y   +Y+  H +QV+L AEFA               LRFL+ S F PLE A + C +R PPL+D M FILGRMG  ++AL  ++ ++ +V +AI+FVE HD  LW  LIE SL     +  LL++A  + +D  +++ +IP+ M I GL+DKV++II++Y  Q+S+   C+   +TD +  LRRL   +++  RV     C  G+C + L
Sbjct:  582 QNKVVNLMLIDRDAALRMLVHQIKSDELKVHAIVKQLEHKRELLHEYLHNLFVHRLVDYNTDKYSSLHEMQVALYAEFAP-----------HVLLRFLQTSSFVPLEKAYKFCSERSPPLWDAMVFILGRMGQHKKALDFIMTQLKNVKQAIQFVEDHDSGLWDYLIEISLSHTECMEELLEYACDHKIDPIKVMQKIPEDMEIAGLKDKVLQIITNYRIQMSLYRGCTKVFETDRIEHLRRLVVARKKPRRVTLQTSC--GVCSLLL 836          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A7S1DIV9_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DIV9_HEMAN)

HSP 1 Score: 171 bits (432), Expect = 1.100e-45
Identity = 103/258 (39.92%), Postives = 152/258 (58.91%), Query Frame = 2
Query:    2 QDRVMQLIRLDRGLTGELLLRHPEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEF-VEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARC 772
            +D+V+ L++       ++L+   +K+ V  VV QLK  R LQH YL  LF + P        + FH LQV L AE   P             L FLR+S    LE AL  C +++  LY EM F+LGRMG+ ++AL++LLE    V +AI+F V   D++LW  LI++ L     ++ LL   G + VD  ++V+ IP GMHI GLR+K++KII+DYH Q+S+ E C   +++D++    RL++GQ+R  RV+A ARC
Sbjct:  323 RDKVLALMKFHEDKALKMLVNCTDKIPVGHVVPQLKEDRRLQHMYLDALFQKDPRAG-----SDFHELQVELYAEIEYP-----------KLLPFLRQSNHYRLETALALCERKK--LYPEMVFVLGRMGNGKQALSLLLEHTSDVQQAIDFCVHQGDEELWEDLIKYCLNHSDLVAPLLHTIGAH-VDPVKVVSRIPLGMHIDGLREKLIKIIADYHLQMSLKEGCERILESDVISLAHRLHKGQKRGVRVDARARC 561          
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Match: A0A5D6XHY4_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHY4_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.620e-45
Identity = 102/273 (37.36%), Postives = 152/273 (55.68%), Query Frame = 2
Query:    2 QDRVMQLIRLDRGLTGELLLRHPEKLSVPSVVGQLKGRRDLQHWYLGLLFARSPETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPLEAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVEAHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPGLRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAGARCSHGLCLMPLAGPPRGA 820
            Q +V  L+++DR     +L+   E+L VP +V QL+  R+L H YL  LF   P  Y A+ YAP H  QV+L AEFA  F            LRFL+ S F PLE A   C +R PPL+D M +ILGRMG  +RAL ++L ++  +  AI FV+ +D  LW  +I+ SL  +A +  LL  A  + +D  +L+ +IP+ M I  L+ K++ II++Y  Q ++   CS   ++D ++ L+R     ++A RV A   C   +C   L  P  G+
Sbjct:  665 QHKVANLMQIDRASAVRMLVAQTEQLKVPDIVKQLEHDRELLHEYLHELFVLRPSEYNAEAYAPLHEAQVALYAEFAPAF-----------LLRFLQTSNFVPLEKAYTYCSERNPPLWDAMIYILGRMGQHKRALDLILTQLHDIHHAIRFVQENDASLWDYVIDLSLTSQANVEQLLQFASQHKIDPIKLIRKIPEDMPIDNLKAKLLDIIANYRIQQNLCTGCSNVFESDRVQLLQRQVATHKKARRVAAKTLCL--ICGDVLRAPAHGS 924          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFS4_9PHAE2.720e-17391.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS06_ECTSI3.450e-13591.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBT2_9STRA7.450e-6151.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TUN1_9STRA5.940e-4942.38Vacuolar protein sorting-associated protein 41 n=2... [more]
A0A7S0EHW5_9CRYP1.460e-4741.41Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A485LHE2_9STRA5.820e-4638.06Aste57867_21416 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YI15_9STRA5.840e-4636.73Vacuolar protein sorting-associated protein 41 n=1... [more]
A0A067BPI1_SAPPC1.030e-4537.31Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S1DIV9_HEMAN1.100e-4539.92Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A5D6XHY4_9STRA1.620e-4537.36RING-type domain-containing protein n=1 Tax=Pythiu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:325240..327421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score407.5
Seed ortholog evalue4.8e-111
Seed eggNOG ortholog2880.D7FS06
Preferred nameVPS41
KEGG koko:K20184
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005770,GO:0005773,GO:0005774,GO:0005798,GO:0005829,GO:0005856,GO:0006403,GO:0006508,GO:0006605,GO:0006623,GO:0006624,GO:0006725,GO:0006726,GO:0006727,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006895,GO:0006897,GO:0006903,GO:0006906,GO:0006914,GO:0006950,GO:0006996,GO:0007033,GO:0007034,GO:0007041,GO:0007154,GO:0007220,GO:0007275,GO:0007568,GO:0008017,GO:0008055,GO:0008092,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008333,GO:0008340,GO:0008593,GO:0009056,GO:0009058,GO:0009267,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010259,GO:0010467,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0016237,GO:0016482,GO:0016485,GO:0017016,GO:0017137,GO:0018130,GO:0019438,GO:0019538,GO:0019748,GO:0019899,GO:0022406,GO:0022411,GO:0023051,GO:0023057,GO:0030135,GO:0030136,GO:0030897,GO:0031090,GO:0031267,GO:0031338,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0032258,GO:0032501,GO:0032502,GO:0032879,GO:0032889,GO:0032940,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033060,GO:0033227,GO:0033263,GO:0033365,GO:0033554,GO:0034058,GO:0034613,GO:0034727,GO:0035542,GO:0042144,GO:0042440,GO:0042441,GO:0042594,GO:0042802,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043324,GO:0043473,GO:0043474,GO:0043621,GO:0043933,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044804,GO:0045055,GO:0045184,GO:0045324,GO:0045746,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046872,GO:0046903,GO:0046907,GO:0046914,GO:0048066,GO:0048069,GO:0048193,GO:0048278,GO:0048284,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051236,GO:0051604,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0060548,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0070727,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072665,GO:0072666,GO:0090174,GO:0097352,GO:0097576,GO:0097708,GO:0098588,GO:0098657,GO:0098796,GO:0098805,GO:0098852,GO:0099022,GO:0099023,GO:0140056,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902500,GO:1902774
EggNOG free text desc.regulation of SNARE complex assembly
EggNOG OGsKOG2066@1,KOG2066@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-12_006960.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons4
Model size835
Cds size822
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15867.1prot_C-linearis_contig80.15867.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig80 325240..327408 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930586.4786322-CDS-C-linearis_contig80:325239..3254161622930586.4786322-CDS-C-linearis_contig80:325239..325416Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 325240..325416 -
1690881146.647565-CDS-C-linearis_contig80:325239..3254161690881146.647565-CDS-C-linearis_contig80:325239..325416Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 325240..325416 -
1622930586.4966664-CDS-C-linearis_contig80:325694..3259281622930586.4966664-CDS-C-linearis_contig80:325694..325928Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 325695..325928 -
1690881146.6622176-CDS-C-linearis_contig80:325694..3259281690881146.6622176-CDS-C-linearis_contig80:325694..325928Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 325695..325928 -
1622930586.5195272-CDS-C-linearis_contig80:326371..3265871622930586.5195272-CDS-C-linearis_contig80:326371..326587Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 326372..326587 -
1690881146.6727087-CDS-C-linearis_contig80:326371..3265871690881146.6727087-CDS-C-linearis_contig80:326371..326587Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 326372..326587 -
1622930586.5370097-CDS-C-linearis_contig80:327213..3274081622930586.5370097-CDS-C-linearis_contig80:327213..327408Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 327214..327408 -
1690881146.689603-CDS-C-linearis_contig80:327213..3274081690881146.689603-CDS-C-linearis_contig80:327213..327408Chordaria linearis ClinC8C monoicousCDSC-linearis_contig80 327214..327408 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930586.5583024-UTR-C-linearis_contig80:327408..3274211622930586.5583024-UTR-C-linearis_contig80:327408..327421Chordaria linearis ClinC8C monoicousUTRC-linearis_contig80 327409..327421 -
1690881146.702826-UTR-C-linearis_contig80:327408..3274211690881146.702826-UTR-C-linearis_contig80:327408..327421Chordaria linearis ClinC8C monoicousUTRC-linearis_contig80 327409..327421 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig80.15867.1

>prot_C-linearis_contig80.15867.1 ID=prot_C-linearis_contig80.15867.1|Name=mRNA_C-linearis_contig80.15867.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=274bp
MQLIRLDRGLTGELLLRHPEKLSVPSVVGQLKGRRDLQHWYLGLLFARSP
ETYGAQEYAPFHALQVSLLAEFAAPFERGRPPAYNSAFLRFLRESGFAPL
EAALRECGKRRPPLYDEMAFILGRMGDTRRALTILLEEVCSVPRAIEFVE
AHDKDLWYRLIEHSLKDEAFLSGLLDHAGVYDVDLARLVAEIPKGMHIPG
LRDKVVKIISDYHFQVSVNESCSASVKTDLLRRLRRLNQGQRRATRVEAG
ARCSHGLCLMPLAGPPRGAPRPPT
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mRNA from alignment at C-linearis_contig80:325240..327421-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig80.15867.1 ID=mRNA_C-linearis_contig80.15867.1|Name=mRNA_C-linearis_contig80.15867.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2182bp|location=Sequence derived from alignment at C-linearis_contig80:325240..327421- (Chordaria linearis ClinC8C monoicous)
GCAGGACCGAGTCATGCAACTAATCAGGCTAGACAGAGGGCTCACGGGCG AGCTCCTGCTCCGACACCCGGAAAAGTTGAGCGTCCCGTCGGTGGTGGGG CAGCTCAAGGGCAGGAGAGACTTGCAGCACTGGTACCTCGGGCTGCTCTT CGCCCGCTCCCCTGAGACGTACGGGGCGCAGGAGTACGCACCGTTTCATG CTCTCCAGGTACGAGTGCCTCTCCGTTTCCTCGTAGGCTTTTGCCGGGAT GGCGGGGATGCGGGGACGCGGGGACGCGGACGTTTTTTATTTTCTTCATG TATACTACTACACGGTTTGTTGTTTTGTGGCGTTTTTGAGTCTTGTTGTG CGGGGTACACCCGTGGCTTCCCCAGGCTAAGACGGGCCGTGTCAAGTGTG CGTTGATAGTGTAGACGTTTCGATCTATCTTCGGCGTATCGGCGGGGGGG TGTATGTTTTTTTTCTTCTTTTTCTCGCCCATTAATATTTTTTGGTAGTC TGCCTCCTCCTCCTCTTCACTACAACTAGCTAGGCTACCATCCGGGGTCA TACAGGAGGGGATGTATCCACCTCCCTCCTGCGGTGCAATGTGTGTGTGT ATGGTGTGGATCCTCGGTTGACGAGATAAACGCTTTGGTTTGAAGCAGGG GCAGACATATCTATGTACGTACCACGAGCGGGGAATGGTGGTGGACGTGG GCGCATGGCTTAGCCTCGATACACGCCTCCCGTTTTATCAGCCCCTCCTA CCGCCAACCCAGCCCGCCTGCCAGCAGGGGGACACGAAACCAGCGTTGCA TGGGCTTACCCCCCCCCCCCGCCTTCCCGCGAAGGTGTCTCTTCTGGCCG AGTTTGCGGCGCCCTTCGAGAGAGGCCGCCCACCCGCCTACAACAGCGCT TTTCTGCGGTTCTTGAGGGAAAGCGGCTTTGCGCCGCTCGAGGCGGCGTT GCGGGAGTGCGGGAAGCGGCGGCCGCCCCTGTACGACGAGATGGCGTTCA TTCTGGGGAGGATGGGTGACACTCGGAGAGCTCTTACCATCCTGCTCGAG GTGTGTTTGATAGGCTTGCTGCGACCGCAGCGTTGCTGTGTTGCCAACAC CAACTACAACTACGAGAGCTCGTTTATATGTCACGGGTTGGTTGCTTTCT CGCACGGTTTGTGTCCTCGAGGTGGTCGAGCGAGAATATACGTTGTGATC GTCGTCAAAAACCGTCATCAGCGGCAGCGATAGCATTGCCATGCCCTCAC CAGGAAAGGCGTAGCAGAGTAGCAGAAGTTTATCGTACATGTATACCCCC AGCACTTCTCCACGCCTGGCTGTGGTAGCCCACGTTAGAGCTCCAACCAC CTCCTCTGGGGAGGGGTTTTTCGTTTTCTCCGCATTCTTCTCAGCTCGAT CCATAATGCCTTCGTACCAGACTCCCCGAGACGTTCTCTCCTCGACCTAA TTCCAACCCTCACCGCCCGCCAACTACACCTGCACACCTACAGGAGGTGT GCAGTGTACCGCGCGCGATCGAGTTTGTCGAAGCCCACGACAAGGATCTG TGGTACCGGCTGATCGAGCACAGCCTCAAGGACGAGGCGTTTCTGTCGGG CCTGCTGGACCACGCCGGGGTGTACGACGTCGACCTGGCACGCCTCGTGG CTGAGATTCCCAAGGGGATGCATATCCCCGGGCTGCGGGACAAGGTGGTC AAGATCATCTCGGACTACCACTTCCAGGCAAGAAAATGCGGGAAGGTGTT TCCTTTGTGTGTGTGTATCGTGGTTTCGTTTCTTCGCGCGAACCCCGGGT GTGTTTGCGATGCACTCTGAGTGCTGCAGCTGTATCGTGTCACTTAATAC GTACGTTCACCGACACGCGAAGTGTCCCTGTTCTTGTTGTGGACCAAAAC CCTGGCGTAAGCAAAACGCACGCGCGCCCAGCGCGCACAACGTTGCAGCG GTGCAACCCTAGCCCTTACGCCCCGCTCGCCGTCAACGAAAAAACCGCAC ACCAGGTGAGCGTGAACGAGTCCTGCAGCGCATCCGTCAAGACAGACCTC CTCCGGAGACTGCGCCGGCTCAACCAGGGACAGCGGCGAGCAACTCGCGT CGAAGCCGGCGCCCGCTGCTCCCACGGCTTGTGTCTGATGCCCCTCGCGG GCCCCCCAAGAGGGGCCCCGCGGCCGCCAACA
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Coding sequence (CDS) from alignment at C-linearis_contig80:325240..327421-

>mRNA_C-linearis_contig80.15867.1 ID=mRNA_C-linearis_contig80.15867.1|Name=mRNA_C-linearis_contig80.15867.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at C-linearis_contig80:325240..327421- (Chordaria linearis ClinC8C monoicous)
ATGCAACTAATCAGGCTAGACAGAGGGCTCACGGGCGAGCTCCTGCTCCG
ACACCCGGAAAAGTTGAGCGTCCCGTCGGTGGTGGGGCAGCTCAAGGGCA
GGAGAGACTTGCAGCACTGGTACCTCGGGCTGCTCTTCGCCCGCTCCCCT
GAGACGTACGGGGCGCAGGAGTACGCACCGTTTCATGCTCTCCAGATGCA
ACTAATCAGGCTAGACAGAGGGCTCACGGGCGAGCTCCTGCTCCGACACC
CGGAAAAGTTGAGCGTCCCGTCGGTGGTGGGGCAGCTCAAGGGCAGGAGA
GACTTGCAGCACTGGTACCTCGGGCTGCTCTTCGCCCGCTCCCCTGAGAC
GTACGGGGCGCAGGAGTACGCACCGTTTCATGCTCTCCAGGTGTCTCTTC
TGGCCGAGTTTGCGGCGCCCTTCGAGAGAGGCCGCCCACCCGCCTACAAC
AGCGCTTTTCTGCGGTTCTTGAGGGAAAGCGGCTTTGCGCCGCTCGAGGC
GGCGTTGCGGGAGTGCGGGAAGCGGCGGCCGCCCCTGTACGACGAGATGG
CGTTCATTCTGGGGAGGATGGGTGACACTCGGAGAGCTCTTACCATCCTG
CTCGAGGTGTCTCTTCTGGCCGAGTTTGCGGCGCCCTTCGAGAGAGGCCG
CCCACCCGCCTACAACAGCGCTTTTCTGCGGTTCTTGAGGGAAAGCGGCT
TTGCGCCGCTCGAGGCGGCGTTGCGGGAGTGCGGGAAGCGGCGGCCGCCC
CTGTACGACGAGATGGCGTTCATTCTGGGGAGGATGGGTGACACTCGGAG
AGCTCTTACCATCCTGCTCGAGGAGGTGTGCAGTGTACCGCGCGCGATCG
AGTTTGTCGAAGCCCACGACAAGGATCTGTGGTACCGGCTGATCGAGCAC
AGCCTCAAGGACGAGGCGTTTCTGTCGGGCCTGCTGGACCACGCCGGGGT
GTACGACGTCGACCTGGCACGCCTCGTGGCTGAGATTCCCAAGGGGATGC
ATATCCCCGGGCTGCGGGACAAGGTGGTCAAGATCATCTCGGACTACCAC
TTCCAGGAGGTGTGCAGTGTACCGCGCGCGATCGAGTTTGTCGAAGCCCA
CGACAAGGATCTGTGGTACCGGCTGATCGAGCACAGCCTCAAGGACGAGG
CGTTTCTGTCGGGCCTGCTGGACCACGCCGGGGTGTACGACGTCGACCTG
GCACGCCTCGTGGCTGAGATTCCCAAGGGGATGCATATCCCCGGGCTGCG
GGACAAGGTGGTCAAGATCATCTCGGACTACCACTTCCAGGTGAGCGTGA
ACGAGTCCTGCAGCGCATCCGTCAAGACAGACCTCCTCCGGAGACTGCGC
CGGCTCAACCAGGGACAGCGGCGAGCAACTCGCGTCGAAGCCGGCGCCCG
CTGCTCCCACGGCTTGTGTCTGATGCCCCTCGCGGGCCCCCCAAGAGGGG
CCCCGCGGCCGCCAACAGTGAGCGTGAACGAGTCCTGCAGCGCATCCGTC
AAGACAGACCTCCTCCGGAGACTGCGCCGGCTCAACCAGGGACAGCGGCG
AGCAACTCGCGTCGAAGCCGGCGCCCGCTGCTCCCACGGCTTGTGTCTGA
TGCCCCTCGCGGGCCCCCCAAGAGGGGCCCCGCGGCCGCCAACA
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