mRNA_C-linearis_contig8.15708.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 1125 bits (2909), Expect = 0.000e+0 Identity = 679/1237 (54.89%), Postives = 773/1237 (62.49%), Query Frame = 3
Query: 591 PLTEFGTIWKERLPDACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMESRAAGRSKKGVQRAPPNALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRLSVPRARRRASVPERYMSG------FARAMCTAWCSMALGRIASPALARGRSVHLWMWRSTIACARGVSFAVLPMRPMRRYRTETLEPSRVALT*QRHSSPRARRRRTSRPLVSAGEESMKRRTPRRPGTHLPVRLWTSSCSISTSVAWPVRAG*RATATGIRCRCPRTASLFEAGAARAWADWIQICSNATKLLV*SSCTARWGASSFAV*WIIGSRVSTARPCFLSSRCVGGDPSSGQKM------------------RLAQRTDRGT------GSATSTGRTRRQC*V*-------LLCRHSPTWTRCRHSTATTLTIGRCMSSVWTRVATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSFDLRGRFRSATYPASCRICWPGI*GSPSSKTRKLVAGSRRV--CWFARVVCCSRGTPTGSTPSWSLPARRPWPWGVRSFPS-----------SAKLVASNRSC----GRMVPMGSLASRNSTAETPTSVSRLAGFGIETGSGLWERSSSTKRACVC*RCETCSRRVW-------------------------------GSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPDRVFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEGRVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRLDDGGRG 4046
PLTEFG IWKERLP ACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFM+SRA GRSKKGV+RAPPNALDG NYFRNLYSIMLERDVGS+EFSAWLSGEEC PAVTVRHL+KWL TTKASVVVWSHR G + + + + P G + + W G A G S+H+ V V R RR E E + R + ++++ + ++T R+ R + + W G TA + AG +++ W + A +++ + C GAS +G + C ++R + + G+K+ L + RG S T+ G QC + L + P +T H + G + WT + + V +D+ P F R + + PA R+ V +R + C R+V G A R + G+ S +A +V +++ G++VP+ E S L G + G G+ + S C + RVW GSAFSYQCDAVFFRGPP VQEEAR YEH FSGELK PGTLKFEPALKNAASPDRVF GIEVKL LD LPPAMR+IPCPRERALRVVPLWGGIG++F TM AAHAAWRSV + DKR++W DICAAESPA LE+LLR+L+SQE RVVCAVTGEHGGAGKS+CA RAAKAVFKTGLVLTPTNSLRTSYTDLP GWSV+TADHQLGF+IGDDA VRKTAGSIHIPRVDVVIIEEAAYMS+HALSMI AA HSSGVHV+GTYDTHQLQPVRESSG SI VDNVDRQL+LERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSA AQTRALERFGGIEP G HVSDFHLAYTR+CARFHAFRGLT CNEAGGWDALGQ VVGAQYRDLGKTGKVHKNHAY IVRSS DSVVV+SAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTV+GKLVIHQARHR+SDVYWLYTAISRATGPSN VLDD+HRS+SDM EH RRSWAT KVS+YLRADV AGRLDDG G
Sbjct: 199 PLTEFGVIWKERLPGACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMDSRAGGRSKKGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREG---AVGPSLHV-----------AVEHCVRTRRLFRRI-AEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARK-------RRRGTDDKADSKKTWYAPPG---TALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWC----GAS-------MGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFT---HMDEVQVFDGHDIED-WTLYVVR----LEAVGDPDVFLNADVTPVFGR----------NYKRYLALIKTPAPHRVS-------------HFVRPARTIQKCHIPRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHADRINAVMVTTSKEAMAVGGKIVPV--------LGEVNRIKSELRKNGTDGGLGIEKLDSGDAYLCFE------ASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARHLYEHCFSGELKAPGTLKFEPALKNAASPDRVFAGIEVKLALDILPPAMRTIPCPRERALRVVPLWGGIGETFGTMEAAHAAWRSVGKDDKRKIWPDICAAESPATLERLLRELVSQEDRVVCAVTGEHGGAGKSYCALRAAKAVFKTGLVLTPTNSLRTSYTDLPSGWSVKTADHQLGFFIGDDARVRKTAGSIHIPRVDVVIIEEAAYMSLHALSMIFAATHSSGVHVIGTYDTHQLQPVRESSGMSISVDNVDRQLVLERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAEAQTRALERFGGIEPTGPGTHVSDFHLAYTRECARFHAFRGLTRCNEAGGWDALGQSAVVGAQYRDLGKTGKVHKNHAYHIVRSSADSVVVQSAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVEGKLVIHQARHRYSDVYWLYTAISRATGPSNAVVLDDVHRSVSDMPEHTRRSWATTKVSSYLRADVAAGRLDDGDGG 1354
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: A0A6H5KBM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM1_9PHAE) HSP 1 Score: 924 bits (2388), Expect = 1.530e-314 Identity = 584/1134 (51.50%), Postives = 673/1134 (59.35%), Query Frame = 3
Query: 750 MESRAAGRSKKGVQRAPPNALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRL-----SVPRARRRASVPERYMSGFARAMCTAWCSMALGRIASPALARGRSVHLWMWRSTIACARGVSFAVLPMRPMRRYRTETLEPSRVALT*QRHSSPRARRRRTSRPLVSAGEESMKRRTPRRPGTHLPVRLWTSSCSISTSVAWPVRAG*RATATGIRCRCPRTASLFEAGAARAWADWIQICSNATKLLV*SSCTARWGASSFAV*WIIGSRVSTARPCFLSSRCVGGDPSSGQKM-------RLAQRTD-------RGTGSATSTGRTRRQC*V*LLCRHSPTWTRCRHSTATTLTIGRCMSSVWTRVATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSFDLRGRFRSATYPASCRICWPGI*GSPSSKTRKLVAGSRRVCWFARVVCCSRGTPTGS--TPSWSLPARRPWPWGVRSFPSSAKLVASNRSCGRMVP-MGSLASRNSTAETPTSVSRLAGFGIETGSGLWERSSSTKRACVC*RCETCSRRVWGSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPDRVFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEGRVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRLDDGGRGAAAQGRPYRTTLA 4085
M+SRA RSKKGV+RAPPNAL G NYFRNLYSIMLER VGS+EFSA SGEEC PAVTVRHLEKWL TTK SVVVW HR G + R R+S R G + T W +G + + RS+ R+ ACARGVSFAVLP RP R E + R + ++S+ + ++T R+ R + + W G TA + G +++ W + +++ + C AR G V C ++R + + G+K+ R++ GTGSATST R L P +T H+ G + V ++ G D+ R H R A C I PG+ L+A R V +R G S L R +S + +A G++VP +G + S + L +++G +S R + E C GSAFSYQCDAVF RG P VQ EAR RYEHFFSGELKTPGTLKFEPALKNAAS DRVF GIE ++ TMGAAH AWRSV + DKR+MW DIC+AESPA+LEQLLR+LMSQE RVVCAVTG+HGGAGKS+C AAKAVF+T LVLTPTNSLRTS+TDLPPGWSV+TADHQLGFYIGDD VRKT GSIHIPRVDVV IEEAAYMS+HALSMILAAAHS GVHV+GTY+THQLQP RE SG SI VDNVDRQ++LER+FP CFHLFARKR RTIDEQVE+DDSLLYILDA +NSA AQ RALERFG I P PHVSDFHLAYTRDC RFHA RGLT CNEAGGWDALGQ GVVGAQYRDLGK GKVHKNHAY IVRSSDDSVVV+S FD GATLEET LSRAAA+ILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGP NV +LDDIHRS+SDMSEHARRSWATRKVS+YLRADV GRLD+G +G + LA
Sbjct: 1 MDSRAGERSKKGVKRAPPNALGGGNYFRNLYSIMLERGVGSTEFSARFSGEECIPAVTVRHLEKWLKTTKVSVVVWLHRGSGAEVVGAKGQTTSLRPRSSASRRGSRGPRVPLGTRW--PLVGSLHRRSRRSRRSISGCGGRALRACARGVSFAVLPRRPKRGKGEEKSDGDTRTF---------GRCADMAEAILSSSQMETDQQTARK-------RRRGTDDKADSKKNWYAPPG---TALDELMLHLHLGGVTCTGKLTSYSHWDSLSLPVHDIIIRTWCGARMGGLDPDV-----------LECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLVLLEGTGSATSTARNGTHTVAMLSMDDLPAYT---HTDEVQAFDGHDIEDRTLYV-----------VRLEAGGDPDVILNADRVTHFV-----------RPARTVQKCHI--PGL-------VHDLLARDLGES-LLRDVDAARRFEKGLFVRTSGLLQQRHADRINAVMVTTSEEAMAVG---GKIVPILGEVNRIKSELRKNGTDGELGIEKLDSGDAYLSFEASRVRNML----EACG----GSAFSYQCDAVFLRGLPEVQAEARHRYEHFFSGELKTPGTLKFEPALKNAASSDRVFAGIE---------------------------------ENLGTMGAAHVAWRSVGKDDKRKMWPDICSAESPASLEQLLRELMSQEDRVVCAVTGKHGGAGKSYCTLHAAKAVFETDLVLTPTNSLRTSHTDLPPGWSVKTADHQLGFYIGDDTRVRKTVGSIHIPRVDVVKIEEAAYMSLHALSMILAAAHSKGVHVIGTYETHQLQPAREGSGLSISVDNVDRQVVLERSFPICFHLFARKRVRTIDEQVEVDDSLLYILDAANNSAKAQIRALERFGEIGPAGCDPHVSDFHLAYTRDCPRFHAVRGLTRCNEAGGWDALGQSGVVGAQYRDLGKVGKVHKNHAYHIVRSSDDSVVVQSTFDGGATLEETILSRAAADILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPLNVVILDDIHRSVSDMSEHARRSWATRKVSSYLRADVTGGRLDEG------EGNQHNNALA 1017
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 828 bits (2140), Expect = 4.850e-273 Identity = 543/1243 (43.68%), Postives = 688/1243 (55.35%), Query Frame = 3
Query: 591 PLTEFGTIWKERLPDACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMESRAAGRSKKGVQRAPPNALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRLSVPRARRRASVPERYMSGFARAMCTAWCSMALGRIASPALARGRSVHLWM---WRSTIACARGVSFAVLPMRPMRRYRTETLEPSRVALT*QRHSSPRARRRRTSRPLVSA-----------------GEESMKRRTPRRPGTHLPVRLWTSSC-SISTSVAWPVRAG*RATATGIRCRCPRTASLFEAGAARAWADWIQICSNATKLLV*SSCTARWGASS-------------------------FAV*WIIGSRVSTARPCFLSSRCVGGDPSSGQKMRLAQRTDRGTGSATSTGRTRRQC*V*LLCRHSPTWTRCRHSTATTLTIGRCMSSV----------WTRVATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSFDLRGRFRSATYPASCRICWPGI*GSPSSKTRKLVAGSRRVCWFARVVCCSRGTPTGSTPSWSLPARRPWPWGVRSFPSSAKLVASNRSCGRMVPMGSLASRNSTAETPTSVSRLAGFGIETGS--------------GLWERSS----STKRACVC*R--CETCSRRVWGSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSG-ELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEG-RVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRLDDGGRGAAAQGRPYRTTL 4082
PLT F WK+RLP ACLAVLVAD+WRDCQ+ LL R+RRRFGFRDVDP+TG+FM S GR ++G NALDG NYFRNL+S++L+RDVGS EF WLSG PA+T+R LEKWL T+A+VVVWSHR G + P ++ P G + G L + WR + V+ ++ RR+R R+A + P + + + G + R+ +R W + ++ + + G+ CR G +++ W + A + + + C+A G + + + S+ S + L C G +++ S TS G QC + + T S G + V WT + + V +D+ P F R + D R R + RI + P R L+A F + C+R G S ++ + + + + AS G++VP+ R AE T +L + TG G W + T+ + R E+C FSYQCDAVFFRG +VQE+ R R+ F G E KTPGTL+FEPALKN +R VFGGI+ K+ LD LPPAMR I CP + +RV+PLW GIG F +M H AWRS++R KR +W +IC AESP+NLE L+R M Q+G R+VCAVTGEHGGAGKS+CA RAA A+FKTGLV+TPTNSLRTS+TD+P GWSV+TADHQLGFY+GDD+ +RKTAGSI VDV+IIEEAAYM + LSMILAAAH SG HV+GTYDTHQLQPV +SSG SI DNVDR++ILE+AFP CFH+FARKRD+T++EQVEMDD LLYIL AGD+S AQTRA+ERFGG P SDFHLAYTRDCARFHAFRGL C+EAGGWD LG++ VVGAQYRDLG GKVHKNH Y+I+RSS D VVV SAFD +LEET+L RA AE LFDPPGSCTVHAVQGRTV+G L+IHQARHR +DV+WLYTA+SRATGPS+V V+DDIHRS SDMS+ R SW +RKVS+Y+ ADV AGRL +GR +R L
Sbjct: 194 PLTTFCMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVDPITGSFMNSTGGGRRREGATTPLRNALDGGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSHRGSGDHVLGPIDKKTDLRPRALHVG---------------------VREGHVYRLELDGPWRDRFGSSLDVAIEH-SVKTQRRFR-------RIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEFNTWYAPPGTVLDELMLHLHL------VGVSCR----------GRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEV-CWRGPIVGAEEV-----------SGTSYGPEDWQCDI------NGAHTAALMSMEVVPVFGH-VDEVEEYDDHGIEDWTLYIIE----LDAFGKPDVFFNADVTPVFGRN-YKRYLDLVDTAARHRVTHFVRPSRIV--SMCHIPKL-VRDLLAHEPGDP-FLQDADCARKFKKGIFVRASGMLQQRYADRIDAVMVTGCDEASAVG-GKIVPVLGEVDRVK-AELRTGQGKLGIESLRTGDAYLCLDAERTWYRDGFWALGALILDETRLRVLEARNALESCG----ACDFSYQCDAVFFRGSSSVQEKMRLRFSDLFKGDETKTPGTLRFEPALKNPLGDERRVFGGIKTKISLDALPPAMRRILCPPKHRMRVIPLWDGIGGGFSSMDHVHDAWRSLERNAKRNLWPEICEAESPSNLESLIRAHMLQQGSRLVCAVTGEHGGAGKSYCATRAATAIFKTGLVVTPTNSLRTSFTDMPCGWSVKTADHQLGFYLGDDSEMRKTAGSIRTLNVDVIIIEEAAYMPLRTLSMILAAAHCSGTHVIGTYDTHQLQPVCDSSGRSISKDNVDRRVILEKAFPLCFHVFARKRDKTVEEQVEMDDGLLYILAAGDDSHEAQTRAIERFGG--GCLDNPSPSDFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGKVHKNHTYKIIRSSADEVVVASAFDGAVSLEETSLCRAEAENLFDPPGSCTVHAVQGRTVEGTLIIHQARHRHADVHWLYTAVSRATGPSSVRVIDDIHRSESDMSDRERVSWVSRKVSSYIYADVAAGRL------GPEEGRRHREAL 1349
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 805 bits (2080), Expect = 2.130e-266 Identity = 516/1171 (44.06%), Postives = 634/1171 (54.14%), Query Frame = 3
Query: 591 PLTEFGTIWKERLPDACLAVLVADSWRDCQVGLLAR--DRRRFGFRDVDPLTGAFMESRAAGRSKKGVQRAPPNALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRLSVPR-ARRRASVPERYMSGFARAMCTAWCSMALGRIASPALARGRSVHL-----WMWRSTIACARGVSFAVLPMRPMRRYRTETLE---PSRVALT*QRHSSPRARRRRTSRPLVSAGEESMKRRTPRRPGTHLPVRLWTSSCSISTSVAWPVRAG*RATATGIRCRCPRTASLFEAGAARAWADWIQICSNATKLLV*SSCTARWGASSFAV*WIIGSRVSTARPCFLSSRCVGGDPSSGQKMRLAQRTDRGTGSATSTGRTRRQC*V*LLCRHSPTWTRCRHSTATTLTIGRCMSSVWTRVATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSFDLR-GRFRSATYPASCRICWPGI*GSPSSKTRKLVAGSRRVCWFARVVCCSRGTPTGSTPSWSLPARRPWPWGVRSFPSSAKL-VASNRSCGRMVPMGSLASRNSTAETPTSVSRLAGFGIETGSGLWERSS----STKRACVC*RCETCSRRVWGSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEG-RVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRL--DDGG 4040
P+T FG W+++LP ACLAVLVA+ WRD QV LL + +RRRFGFRDVDP TGAFM S GR KKG NALDG NYFRNLYSI+LERD+G EF W+SG+ PA+T+ HLEKWL T ASVVVWSHR G + P + +P ++ + G L W R + + +V R RR T+E P + S + + M PV +S S W G + L AG + A +++ + C+A G G P Q RL + L + +G F R + D R R S + A +CW G + G+ S S R W + ++A + + + G M + N T + A G W + T+ + S FS+QCDAVFFRG +VQE+ R R+ FSG KTPGTLKFEPALKN +R VF GI VKL LD LPPAMR IPCP + L V+PLW G+G F +M AH+AWR + + KR MW +IC AESP+ LE LLR +S++G R+VCAVTGEHGGAGKS+CAF AAK +FKTGLV+TPTNSLRTS+T+LP GW+V+TADHQLGFY+GDD+HV+KTAGSI +VDV+IIEEAAYM + LSM+LAAAHSSG HV+GTYDTHQLQPV ESSG SI DNV+R+ ILE+AFPTCFH+FARKRD+T+DEQVEMDD LL+IL AG++S AQTRA+ERFGG P SDFHLAYTRDCARF+AFRGL CNE+GGWD LG + VVGAQYRDLG G+VHKNH Y I+RSS D+VVV SAFD A+L+ET+L RA AE LFDP G+CTVHAVQGRTV+G+L+IHQARH ++DVYW+YTAISRATGPSNV V+DDIHRS SDMS+ R SW + KVS+Y+ ADV A RL D+GG
Sbjct: 191 PITAFGKKWQKQLPGACLAVLVAEVWRDSQVYLLKKPKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQLPTLHVG----------------------VREGHVYRLVLEGPWGDRFGSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFVTKTFSC-----------VADIVSDIMAINETGGDHNRQPVEKRKHGRKVSESKTWYAPPGTALDELMLH--------LHLAG----------VSCEAHGVIIRTWCSASMG----------GLDPDDFEP--------------DQATRLIE------------------------------------------------------------------LHNALGLK------FHRGV-------LDFRVSRQYSQSLLALLEVCWRGP-----------IVGAEDA-------------------SGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALERTWYRDGFWALGALILDETRLRVL--EARNALELCGASDFSFQCDAVFFRGCSSVQEKMRLRFNQLFSGNDKTPGTLKFEPALKNPLCGERRVFEGIVVKLSLDALPPAMRKIPCPLKPRLLVIPLWDGVGTGFSSMEEAHSAWRRLGKNTKRNMWPEICEAESPSKLENLLRGSLSRQGSRIVCAVTGEHGGAGKSYCAFNAAKNIFKTGLVVTPTNSLRTSFTNLPTGWNVKTADHQLGFYLGDDSHVKKTAGSIRALKVDVIIIEEAAYMPLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKFILEKAFPTCFHVFARKRDKTVDEQVEMDDGLLHILAAGNDSHEAQTRAIERFGG--GCLDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNLGRVHKNHNYNIIRSSGDTVVVASAFDGAASLQETSLCRAEAENLFDPSGACTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVIDDIHRSKSDMSDRERASWISGKVSSYIYADVAAERLGSDEGG 1172
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: D7FV89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV89_ECTSI) HSP 1 Score: 762 bits (1968), Expect = 5.000e-250 Identity = 520/1173 (44.33%), Postives = 646/1173 (55.07%), Query Frame = 3
Query: 804 NALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRLSVPRARRRASVPERYMSGFARAMCTAWCSMALGRIASPALARGRSVHLWMWRSTIACARGVSFAVLPMRPMRRYRT------ETLEPSRVALT*QRHS-----------SPRARRRRTSRPLVSAGEESMKRRTPRR----PGTHLP-----VRLWTSSCS--ISTSVAWPVRAG*RATATGIRCRCPRTASLFEAGAARAWADWIQICSNATKLLV*SSCTARW---GASSFAV*WIIGSRVSTARPCFLSSRCVGGDPSSGQKMRLAQRTDRGTGSATSTGRTRRQC*V*LLCRHSPTWTRCRHSTATTLTIGRCMSSVWTRVATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSFDLRGRFRSATYPASCRICWPGI*GSPSSKTRKLVAGSRRV--CWFARVVCCSRGTPTGSTPSWSLPARRPWPWGVRSFPSSAKLVA---SNR-------SC-------GRMVPMGSLASRNSTAETPTSVSRLAGFGIETGS--------------GLWERSS----STKRACVC*R--CETCSRRVWGSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEG-RVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRL--DDGG--RGAAAQG--RPYRTTLAL 4088
NALDG NYFRNLYSI+LERD+G EF W+SG+ P +T+RHL KWL TTKA+VVVWSHR G ++ P + P G G + R V + WR V+ +R RR+R E EP R + S + + + K P+ PGT L + L SCS +S W + A GI R +AS+ D AT+L+ + G F V S+ S + L C G + + S +S GR QC + G +++ P M + + G + W + L L + + + + I +P + V SR V C +V G R + G+ F ++ ++ +NR SC G++VP+ R + AE T L + TG G W + T+ + R E+C S FSYQCDAVFFRGP +V+EE R + H FSG+ KTPGTLKFEPALKN +R VF GIEVKL LD LPPAMR IPCP + L+V+PLWGG+G F +MG AH AW S+++ KR +W +IC AESP+ LE LLR L+SQ+ RVVCAVTGEHGGAGKS+CAFRAAK +FKTGLV+TPTNSLRTS+TD+P GWSV+TADHQLGFY+G+D+ +RKTAGSI +VDV+IIEEAAYM + LSMILAAA SG HV+GTYDTHQLQPV ESSG SI DNVDR++ILE+AFPTCFH+FARKRD+T +EQVEMDD LLYIL AG+NS AQTRA+ERFG P P S+FHLAYTRDCARFHAFRGL CN GGWDALG+ V+GAQYRDLG GK+HKNH Y IVRSS D +VV SAFD +LEET+L RA AE LFDPPGSCTVHAVQGRTV+G+L+IHQARHR +DV+WLYTA+SRATGPSNV V+DD HR S+MS+ R SW +RKVS+Y+ AD+ +GRL D+GG R A AQ R YR T L
Sbjct: 75 NALDGGNYFRNLYSILLERDIGEEEFDTWVSGDTKPPPLTLRHLHKWLNTTKANVVVWSHRGTGADVAGPCDEKTNLRPPTLHVGVRE-----------GHVY-------RLVLVGPWRERFGSPIDVTIEN-GIRTHRRFRRIAETTEEEEEPDRTGCGTKTFSCVADIVSDILANNQTEXXXXXXXXXXXXXKREKASEPKTWYAPPGTALDKLMLHLHLVGVSCSGRLSNYSHWDSLS---LPAHGITIRTWCSASMGGLDPDEFEPD------QATRLIELHNALGLKFYRGVLDFRV----SSQYSQSLLALLEV-CWRGPIVGAEDV-----------SGSSYGREDWQCDI----------------------NGAHTAALMNMETVPVFGHMDEV-EEFDGHDIEDWTLYIIELDALDEPDVFLNADV-TPVFGRNYKRYLDLIDTAPRHRVTHFVRPSRTVGRCHIPTLVRDLLEHELGDPLLEDADCARKFKKGI--FVRASGMLQQRYANRIDAVMVTSCDEASAVGGKVVPVLCEVDR-AKAELRTGQGELGIEALRTGDAYLCFDAERTWYRDGFWALGALILDETRLRVLEARNALESCG----ASDFSYQCDAVFFRGPCSVREEMRLCFGHLFSGDKKTPGTLKFEPALKNPLCGERRVFEGIEVKLSLDTLPPAMRQIPCPPKPHLQVIPLWGGVGAGFSSMGDAHNAWCSLEKSTKRNLWPEICEAESPSKLESLLRGLLSQQASRVVCAVTGEHGGAGKSYCAFRAAKKIFKTGLVVTPTNSLRTSFTDMPSGWSVKTADHQLGFYLGNDSEMRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAARCSGTHVIGTYDTHQLQPVCESSGMSISSDNVDRKVILEKAFPTCFHVFARKRDKTTEEQVEMDDGLLYILAAGNNSQEAQTRAIERFGRECPTGNDPSPSEFHLAYTRDCARFHAFRGLPGCNAPGGWDALGRTTVIGAQYRDLGNLGKIHKNHTYNIVRSSADEIVVASAFDCAVSLEETSLCRAVAENLFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTAVSRATGPSNVWVIDDAHRRDSNMSDRERASWVSRKVSSYIYADIASGRLGSDEGGQHREALAQELHRAYRGTCNL 1172
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE) HSP 1 Score: 758 bits (1958), Expect = 8.380e-249 Identity = 392/537 (73.00%), Postives = 432/537 (80.45%), Query Frame = 2
Query: 869 LIRVLGVAFGRRMYTGRYCPPS*EVAHDHQGVSRRVVA------QGSGAEVVGPEGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGALGPSLDVAVDHCVRTRRLFRRIADAADE----EISDRDTRTFACCADMTEALLASSQTETDQQTARKRRRGIDEKADTKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGLVVRSWCGASMGGLDPDLLECDEATRLIELHGTLGRKLIRGVMDYRVSSEYSPSLLSFLEVCWRGPIVGAEDALGTTYGPGDWQCDINGAHTAAMLSMITLPAFTHVDEVQAFDGHDIDDWTLYVIRLDSGGDPDVFLNADVTPVFGRNYKRYLALVHTPAPHRVTHFVRPARTVQKCHIPGLVQDLLARDLGEPLLQDPEAGRRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAVGGKVVPVLGEVSRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACVG 2449
L R +G+ G C P+ V H + + + +GSGAEV GP+ Q TSLRPRALHVGVREGHVYRLVLDGPWKDRFT AREGA+GPSLDVAV+HC RTRRLFRR+A+AA+E E SD DTRTF CADMT+A+LA+ QTETDQQT RKRRRG+D+KAD+K+TW LTSYSH DSLSLPAHG++VR+W GASM GLDPD LECDEATRLIELHGTLGRKLI GVMD+RVSSEYSPSLL+ LEVCWRGPI GAEDALGTTYGPGDWQCDINGAHTAAM SM LPAFTH+D+ QAFDGHDI+DWTL V+RL++GGDPDVF RYLAL+ TPA +RVTHFVRPART +KCHIP LVQD+LARDLGEPLLQD +A RRFKKGLLVRTSGLLQ+RHA RINAVMVTTS+EAMAVGGK+VPVLGEV+RIKSELRKNGTDGELGIEKLDSGDAYL FEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEAC G
Sbjct: 267 LERDVGLTEFSAWLLGEECTPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVRGPKDQPTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMTQAILATGQTETDQQTTRKRRRGVDDKADSKETW-------------------------LTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIELHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDALGTTYGPGDWQCDINGAHTAAMPSMENLPAFTHMDDGQAFDGHDIEDWTLCVVRLEAGGDPDVF--------------RYLALIQTPALNRVTHFVRPARTDRKCHIPELVQDVLARDLGEPLLQDLDAARRFKKGLLVRTSGLLQRRHAHRINAVMVTTSDEAMAVGGKIVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLSFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGG 764
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: A0A6H5KWL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL4_9PHAE) HSP 1 Score: 743 bits (1919), Expect = 2.300e-248 Identity = 370/534 (69.29%), Postives = 437/534 (81.84%), Query Frame = 3
Query: 2451 SAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEGR-VVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRL--DDGG 4040
S +S+QCDAVFFRG +VQE R R+ FSG KTPGTLKFEPALKN +R VF GI VKL LD LPPAMR IPCP + L V+PLW GIG F +M AH+AWR + + KR MW +IC AESP+ LE LR ++S++G +VCAVTGEHGGAGKS+CAF AAK +FKTGLV+TPTNSLRTS+T+LP GW+V+TADHQLGFY+GDD+HV+KTAGSI +VDV+IIEEAAYM + LSM+LAAAHSSG HV+GTYDTHQLQPV ESSG SI DNV+R++ILE+AFPTCFH+FARKRD+T+DEQVEMDD LL+IL AG++S AQTRA+ERFGG P SDFHLAYTRDCARF+AFRGL CNE+GGWD LG + VVGAQYRDLG GKVHKNH Y ++RSS ++VVV SAFDDGA+LEET+L RA AE +FDPPGSCTVHAVQGRTV+G+L+IHQARH ++DVYW+YTAISRATGPSNV V+DDI+RS SDMS+ R SW +RKVS+Y+ ADV A RL D+GG
Sbjct: 212 SEYSFQCDAVFFRGSSSVQENMRLRFNQLFSGNEKTPGTLKFEPALKNPLCGERRVFEGIVVKLSLDALPPAMRKIPCPLKPRLLVIPLWDGIGTDFSSMEEAHSAWRRLGKNTKRNMWPEICEAESPSKLEIFLRGMLSRQGSSIVCAVTGEHGGAGKSYCAFNAAKNIFKTGLVVTPTNSLRTSFTNLPSGWNVKTADHQLGFYLGDDSHVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMVLAAAHSSGTHVIGTYDTHQLQPVCESSGMSISRDNVNRKVILEKAFPTCFHVFARKRDKTVDEQVEMDDGLLHILAAGNDSHEAQTRAIERFGG--GCLDDPSPSDFHLAYTRDCARFYAFRGLLGCNESGGWDVLGHKTVVGAQYRDLGNPGKVHKNHMYNVIRSSAETVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQARHPYADVYWIYTAISRATGPSNVRVIDDIYRSKSDMSDRERASWVSRKVSSYIYADVAAERLGSDEGG 743
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 757 bits (1954), Expect = 2.100e-241 Identity = 520/1265 (41.11%), Postives = 654/1265 (51.70%), Query Frame = 3
Query: 591 PLTEFGTIWKERLPDACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMESRAAGRSKKGVQRAPPNALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRLSVPRARRRASVPERYMSGFARAMCTAWCSMALGRIASPALARGRSVHLWMWRSTIACARGVSFAVLPMRPMRRYRTETLEPSRVALT*QRHSSPRARRRRTSRPLVSAGEESMK-RRTPRRPGTHLPVRLWTSSCSISTSVAWPVRAG*RATATGIRCRCPRTASLFEAGAARAWADWIQICSNATKLLV*SSCTARWGA------------------SSFAV*W---IIGSRVSTARPCFLSSRC--------VGGDPSSGQ--------------------------------------------------KMRLAQRTDRGTGSATSTGRTRRQC*V*LLCRHSPTWTRCRHSTATTLTIGRCMSSVWTR-----------VATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSFDLRGRFRSATYPASC---RICWPGI*GSPSSKTRKLVAGSRRVCWFARVVCCSRGTPTGSTPSWSLPARRPWPWGVRSFPSSAKLVASNRSCGRMVPMGSLASRNSTAETPTSVSRLAGFGIETGS--------------GLWERSS----STKRACVC*RCETCSRRVWGSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPD-RVFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEG-RVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRL--DDG 4037
P+T FG W+E+LP ACLAVLVAD+WRD QV LLAR+R+RFGFRDVDP TGAF S GR KKG NALDG NYFRNLYSI+LERD+G +EF W+SG+ PA+T+RHLEKWL+ TKA VVVWSHR G + P + + P G G + L GR W R + V V R RR T E +T +T + + M ++T + +S W G TA A + G ++ W + A +++ + C+A G S+ + + ++ RVS+ L + VG + +SG K+ D + + R L ++P R H + T+ +C S R + C+ R V + + + + TS D P C R+ G L G +C+ A G W+L A A V G++VP+ R AE T L + TG G W + T+ + S FSYQCDAVFFRG +VQ++ R R++H FSG+ KTPGTLKFEPALKN + + RVF GI VKL LD LPPAMR IPCP + VVPLW GIG F++M AH AWR + + KR +W +IC AESP+ LE L R ++S +G R+ CAVTGEHGG GKS+C RAA A F+TGLVLTPTNSLRTSYT+LP GWS TAGSI +VDV+IIEEAAYM + LSM++AAA+ SG HV+GTYD HQLQPV +SSG SI DNVDR++ILE+AFP CFH+FARKRD+TI++QVEMDD LL+IL AG++S AQTRA+ERFGG + P SDFHLAYTRDCARFHAFRGL CNE GGWD+LG +VGAQYRDLGK+GK+HKNH Y I RSS D VVV SAFD +LEET+L R AE LFDPPG+CTVHAVQGRTV+G+L+IHQARH +DV+WLYTA+SRATGPSNV V++DIHRS S+MS+ R SW RK+S+Y+ ADV AGRL D+G
Sbjct: 191 PMTAFGKKWQEQLPGACLAVLVADTWRDSQVDLLARERKRFGFRDVDP-TGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVRE-----------GHVYRLVL-EGR----WRDRFGSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVT--------GIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGRKVSECKTWYAPPG---TALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLIDNAPRH-RVTHFVRPSRTVSKCHISKLVRDLLAHELGDPLLEDADCA-RRFKKGIFVRASGMLQQRYADRIDAVMVTSTDEASAVGGKIVPVLCEVDRVKAELRTGQGDLGIDSLHTGDAYLCFDAERTWYRDGF-------WALGAX-----------DEASAVG-----GKIVPVLCEVDRVK-AELRTGQGALGIESLRTGDAYLCFEAERTWYRDGFWALGTLILDETRLRVL--EARNALESFGASDFSYQCDAVFFRGSSSVQDKMRLRFDHLFSGDEKTPGTLKFEPALKNPLTGESRVFEGIVVKLSLDALPPAMRKIPCPLKPPFLVVPLWDGIGTRFNSMEGAHDAWRRLGKHTKRDLWPEICEAESPSKLECLFRGMLSPQGSRIACAVTGEHGGTGKSYCTIRAATATFETGLVLTPTNSLRTSYTNLPSGWS--------------------TAGSIRTLKVDVIIIEEAAYMPLRTLSMVMAAAYGSGTHVIGTYDVHQLQPVCDSSGMSISRDNVDRKVILEKAFPMCFHVFARKRDKTIEDQVEMDDGLLHILAAGNDSHEAQTRAIERFGGR--CHFNPSPSDFHLAYTRDCARFHAFRGLLGCNELGGWDSLGHATLVGAQYRDLGKSGKIHKNHTYSITRSSADEVVVASAFDGAVSLEETSLCRVEAENLFDPPGACTVHAVQGRTVEGRLIIHQARHFHADVHWLYTAVSRATGPSNVMVIEDIHRSESNMSDLERISWVYRKISSYIYADVTAGRLGPDEG 1377
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: A0A6H5L2B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2B8_9PHAE) HSP 1 Score: 725 bits (1871), Expect = 1.170e-232 Identity = 527/1260 (41.83%), Postives = 654/1260 (51.90%), Query Frame = 3
Query: 591 PLTEFGTIWKERLPDACLAVLVADSWRDCQVGLL-ARDRRRFGFRDVDPLTGAFMESRAAGRSKKGVQRAPPNALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRLSVPR-------------ARRRASVPERYMSGFARAMCTAWCSMALG----------RIASPALARGRSVHLWMWRSTIACARGVSFAVLPMRPMRR-YRTETLEPSRVALT*QRHSSPRARRRRTSRPLVSAGEESMKRRTPRRPGTHLPVRLWTSSCSISTSVAWPVRAG*RATATGIRCRCPRTASL-------FEAGAARAWADWIQICSNATKLLV*SSCTARWGASSFAV*WIIGSRVSTARPCFLSSRCVGGDPSSGQKMRLAQRTDRGTGSATSTGRTRRQC*V*----LLCRHSPTWTRCRHSTATTLTIGRCMSSVWTRVATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSF--------------------DLRGRFRSATYPASCRICWPGI*GSPSSKTRKLVAGSRRVCWFARVVCCSRGTPTGSTPSWSL---------PARRPWP----W--GVRSFPSSAKLVASNR----SCGRMVPMGSLASRNSTAETPTSVSRLAGFGIETGSG-LWERSSSTKRACVC*RCETCSRRVW-------------------------------GSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPDR-VFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEGRVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRL--DDGG 4040
P+T FG W+E+LP A LAVLVAD+WRD QV L+ AR+RRRFGFRD DP TGAFM S GR K+G NALDG NYFRNLYSI+LERD+G EF W+SG+ PA+T+ HLEKWL TKASVVV SHR PG P R V + G R + +A+ RI+ T +C + ++ ++ R + + +E R +H + + P +A +E M L + L SC IS + A GI R +AS+ FE A + + C V ++++ S FA+ C+ VG + +SG +S GR QC + + T H + + ++ V+ R + L + F RP T D RF+ + + ++ R V +C RV R T G SL A R W W G+ + V R SCG V L V R+ + TG G L S T A +C E R W GS SYQCDAVFFR + RR G+ +TPGTLKF PALKN +R VF GI VKL LD LPPAMR IPCP + L V+PLW GIG SF +M AH AWR + R KR + +IC AE VVCAVTGEHGGAGK FC RAA A F+TGLVLTPTN+LRTSYT+LP GWSV+TAD QLGF + DD++V+KTAGSI +VDV+IIEEAAYM + LSMILAAAHSSG HV+GTYDT+QLQPV +SSG SI DNVDR++ILE+AFPT F++FAR+RD+TI++QV+MDD LL+IL AG++S A +RA++RFGG P SDFHL YTR+CARFHAFRGL CNEAG WD LG + VGAQYRDLG GKVHK H Y ++ SS D+VVV SAFDDGA+LEET+L RA AE +FDPPGSCTVHAVQGRTV+G+L+IHQARHR +DV+WLYT +SRATGPSNV V+DDIHRS S+MS+ R SW TRKVS+Y+ ADV AGR+ DDGG
Sbjct: 257 PVTTFGKKWQEQLPGASLAVLVADAWRDSQVDLIKARERRRFGFRDADP-TGAFMISSRGGRPKRGAPVQNKNALDGGNYFRNLYSILLERDIGEVEFDKWVSGDTEPPALTLLHLEKWLYMTKASVVVGSHRGPGANTLGPSDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRFGSSLDVAIEHRVRTYRKFRRISEMTEEEEEPDTTGFGAKTFSCVADIVSDIMAIKQTREDHNRQPVEKER------KHGRKVSECKTWYAPPGTALDELM-----------LHLHLAGVSC-ISRLTNYSHWDSLSLPAHGIITRSWCSASMGGLDPDDFEPDQATRLIELHKFCRGVLDFRV----SSQYSKSLFAL----------LEVCWRGPM-VGAEDASG----------------SSYGREDWQCDINGAHTAALMNMETVPVLGHMDEPDVFLNADVTPVFGRN-------YKRYLDLIDNAPRHRVTHFVRPSRTVSRCHIPKLVQDLLAHELGDHLLEDDDCARRFKKEIFVRAS-----------VTRLRLWVEIVLVLCEVDRVKAELR-TGQGDLGIESLRTDDAYICFDAERTWYRDGFWALGILILDETRLRVLEARNALESCGGAVTR--LRLWVEIVLVLCEVDRVKAE-LRTGQGDLGIESLRTDDAYICFDAE----RTWYRDGFWALGILILDETRLRVLEARNALESCGGSDLSYQCDAVFFR-------DLRR-------GDEETPGTLKFGPALKNPLCEERRVFEGIVVKLSLDALPPAMRKIPCPFKPPLSVIPLWDGIGTSFHSMEGAHDAWRRLGRNTKRDLSPEICEAE------------------VVCAVTGEHGGAGKRFCTIRAATATFETGLVLTPTNNLRTSYTNLPSGWSVKTADRQLGFNLSDDSYVKKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAAHSSGTHVIGTYDTNQLQPVCDSSGMSISRDNVDRKVILEKAFPTFFYVFARRRDKTIEDQVQMDDGLLHILAAGNDSDEAHSRAIKRFGG--QHIENPSPSDFHLVYTRECARFHAFRGLLGCNEAGDWDGLGCQTAVGAQYRDLGNPGKVHKIHMYNVIGSSADTVVVASAFDDGASLEETSLCRAEAENVFDPPGSCTVHAVQGRTVEGRLIIHQARHRHADVHWLYTGVSRATGPSNVRVIDDIHRSESNMSDRERVSWVTRKVSSYIYADVAAGRIKSDDGG 1406
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Match: A0A6H5JTS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS3_9PHAE) HSP 1 Score: 717 bits (1850), Expect = 2.290e-229 Identity = 495/1187 (41.70%), Postives = 634/1187 (53.41%), Query Frame = 3
Query: 591 PLTEFGTIWKERLPDACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMESRAAGRSKKGVQRAPPNALDGENYFRNLYSIMLERDVGSSEFSAWLSGEECTPAVTVRHLEKWLTTTKASVVVWSHRAPGPRLSVPRARRRASVPERYMSG------FARAMCTAWCSMALGRIASPALARGRSVHLWMWRSTIACARGVSFAVLPMRPMRRYR--TETLEPSRVALT*QRHSSPRARRRRTSRPLVSAGEESMK------RRTPRRPGTHLPVRLWTSSCSISTSVAWPVRAG*RATATGIRCRCPRTASLFEAGAARAWADW--IQICSNATKLLV*SS---CTARWGASSFAV*WIIGSRVSTARPCFLSSRCVGGDPSSGQKMRLAQRTDRGTGSATSTGRTRRQC*V*LLCRHSPTWTRCRHSTATTLTIGRCMSSV----------WT--RVATPTCS*MRMLLQSLVGTTSDIWPWFTRPLHTA*PTSFDLRGRFRSATYPASCRICWPGI*GSPSSKTRKLVAGSRRVCWFARVVCCSRGTPTGS--TPSWSLPARRPWPWGVRSFPSSAKLVASNRSCGRMVPMGSLASRNSTAETPTSVSRLAGFGIETGSG-LWERSSSTKRACVC*RCETCSRRVWGSAFSYQCDAVFFRGPPAVQEEARRRYEHFFSGELKTPGTLKFEPALKNAASPDRVFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVDRGDKRRMWLDICAAESPANLEQLLRQLMSQEGRVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWSVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSSGVHVMGTYDTHQLQPVRESSGSSIGVDNVDRQLILERAFPTCFHLFARKRDRTIDEQVEMDDSLLYILDAGDNSAIAQTRALERFGGIEPRTYGPHVSDFHLAYTRDCARFHAFRGLTICNEAGGWDALGQRGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDPPGSCTVHAVQGRTVDGKLVIHQARHRFSDVYWLYTAISRATGPSNVTVLDDIHRSISDMSEHARRSWATRKVSTYLRADVKAGRL--DDGGR 4043
PLT FG WK+RLP ACLAVLVAD+WRDCQ+ LL R+RRRFGFRDV+P+TG+F+ S GR K G NA DG NYF+NL+ ++L RDVGS EF WL+G PA +R LEKWL TKA+VVVWS+R G + P ++ P G + + WC+ G S+ + + S +R RR+R E +E T + S L++ + ++ R R+ G +W + + G+ CR G +++ W + + ++ T+L+ + G F V S+ S + L C G +++ S TS G QC + + T S A G + V WT ++ LL + D+ P F R + D R R + RI + + G R + + C+R G+ S L R + A G++VP+ R E T +L + TG L + T A E+C S FSYQCDAVFFRG +VQE+ R R+ ++++ RV GGI+ K+ LD L PAMR IPCP + LRV+PLW GIG F +M H WRS+++ KR +W +I AE +V A T + KS+CA RAA A+FKTGLVLTPT+ LRT++TD+P GWSV+TADHQLGF +G+ +HVRKTAGSI +VDV+IIEEAAYM + LSMILAAAHSSG HV+GTYDTHQLQPV +SSG SI NVDR++ILE+AFP CFH+FARKRD+T++EQVEMDD LLYIL AGD+S AQTRA+ERFGG P P SDFHLAYTRDCARFHAFRGL C+EAGGWD LG++ VVGAQYRDLG GKVHKNH Y I+RSS D V+V S FD +LEET+L RA AE LFDPPGSCTVHAVQGRTV+GKL+IHQARH +DV+WLYTA+SRATGPSNV V+DDIHRS S+M + R SW +RKVS+Y+ DV AGRL + GGR
Sbjct: 130 PLTTFGMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVNPITGSFINSTGGGRQKGGATTPLRNASDGGNYFQNLFPVLLGRDVGSEEFGMWLAGVSEPPARKLRDLEKWLIKTKANVVVWSYRGSGDHVLGPIDKKTDLRPRGLHVGVREGDVYRLELDGPWCNRF-----------GSSLDVAIEHS--------------VRTQRRFRRTAEAIEEKEEPDTTECGSKAFTCVTDIVSDLMAINKSEVEDGPQQAARKKRKRGKTSEFNMWYAPPGTALEELML-----HLHLVGVSCR----------GRLSSYSHWDSLSVPAHVTRLIELHNELGLQFSHGVLDFRV----SSQYSQSLLALLKV-CWRGPIVGAEEV-----------SGTSYGPEDWQCDI------NGAHTAALMSMAVVPVFGH-VDEVEEYHDHDIEDWTLYKIELDALGKPDELLNA------DVTPVFGRN-YKRYLDLVDTAARHRVTHFVRPSRIVSMCHIPTLAKDLLAHELGDRLL----QDADCARKFKKGTFVRASGMLQQRYADRIDAVMVTGCDEAFAVG---GKIVPVLGEVDRVKD-ELRTGQEKLGIESLRTGDTYLCLDAEQTWNAL-----ESCGT----SDFSYQCDAVFFRGSSSVQEKMRLRFSDL----------IRYDER--------RVLGGIKAKISLDALSPAMRRIPCPPKHCLRVIPLWDGIGGGFSSMEYVHDVWRSLEKNAKRNLWPEIGEAE-----------------KVFSAPTCSN----KSYCATRAATAIFKTGLVLTPTSILRTAFTDMPCGWSVKTADHQLGFSLGNGSHVRKTAGSIRTLKVDVIIIEEAAYMPLRTLSMILAAAHSSGTHVIGTYDTHQLQPVCDSSGMSISKANVDRRVILEKAFPICFHVFARKRDKTVEEQVEMDDGLLYILAAGDDSHEAQTRAIERFGGEFPTASDPSPSDFHLAYTRDCARFHAFRGLLGCDEAGGWDGLGRQTVVGAQYRDLGNLGKVHKNHTYDIIRSSADEVLVASVFDGTVSLEETSLCRAEAENLFDPPGSCTVHAVQGRTVEGKLIIHQARHPHADVHWLYTAVSRATGPSNVRVIDDIHRSESNMFDRERVSWVSRKVSSYIYVDVTAGRLGPEQGGR 1190 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15708.1 >prot_C-linearis_contig8.15708.1 ID=prot_C-linearis_contig8.15708.1|Name=mRNA_C-linearis_contig8.15708.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=506bp MTEALLASSQTETDQQTARKRRRGIDEKADTKKTWYAPPGTALDELMLHLback to top mRNA from alignment at C-linearis_contig8:2768085..2772423+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15708.1 ID=mRNA_C-linearis_contig8.15708.1|Name=mRNA_C-linearis_contig8.15708.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4339bp|location=Sequence derived from alignment at C-linearis_contig8:2768085..2772423+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:2768085..2772423+ >mRNA_C-linearis_contig8.15708.1 ID=mRNA_C-linearis_contig8.15708.1|Name=mRNA_C-linearis_contig8.15708.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3036bp|location=Sequence derived from alignment at C-linearis_contig8:2768085..2772423+ (Chordaria linearis ClinC8C monoicous)back to top |