mRNA_C-linearis_contig8.15707.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI) HSP 1 Score: 1493 bits (3866), Expect = 0.000e+0 Identity = 921/1035 (88.99%), Postives = 944/1035 (91.21%), Query Frame = 2
Query: 125 MASKFWAHESGASGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVRVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMIAKEGVPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------TQKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGXXXXXXAVVVAGKDKGPPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLLQAGTGVEVDESEVTDALAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEETDYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDDGGRGGGRXXXXXXXXXGRDSNRGXXXXXXXXXXXXXXRGYNRPGQTQNNRFQGGRXXXXXYSGRGAG--------NYIRERRDMGVGPRR 3181
MASKFWA ESGASGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVRVVKSAKDRSFEAIRTSVGKIRT +KINDWNGIQ NFDECNKHVDKSKVMIAKEGVPSFYIKLLA+LED+LA TLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANP AYAEESS XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TQKNLED XXXXXXXXX +GDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDG AVV AGK+KG LKLDLDI+SEELEKKLRECLASRGRKATDPK+VLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYI+RVADLLE+RPELTLGQMGNEVVADL+QAGTGV+VDESEV D LAEVEKTGVLKVVGSLS YMIRLGDEYTKSLQ+INPHTQEYIRRLKDESVVV+LA KVQAYYERQGEM+VVADLALLQAEHLYYQHESIA AVHKAQSFTNKFGKTEDLHPACTV+SASAPSDGALDV K+HP AFLGQP VDHE DYTEQLK LCVTVYQHGDDR RTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQAD+STQILYNRMMVTLGLCAFR+GLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRC+DLILGLDVWNLIPGEG AE+VK MVKEKIQ EALRTYLFTYSPHYESLSLPTLCEMFDM KSKAHSIISKMML+ ELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDDGGRG XXXXXX G S G XXXXXXXXX XXX GYNRPGQT NNR+QGG+ GRG NYIRERRDMGVGPRR
Sbjct: 1 MASKFWAQESGASGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVRVVKSAKDRSFEAIRTSVGKIRTKIKINDWNGIQTNFDECNKHVDKSKVMIAKEGVPSFYIKLLANLEDLLAVTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPDAYAEESSSEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKTQKNLEDXXXXXXXXXXXXXXXXXXXXXDGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGKKKKDKAVVTAGKEKGAALKLDLDISSEELEKKLRECLASRGRKATDPKEVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYISRVADLLESRPELTLGQMGNEVVADLIQAGTGVDVDESEVADVLAEVEKTGVLKVVGSLSQYMIRLGDEYTKSLQNINPHTQEYIRRLKDESVVVDLAAKVQAYYERQGEMSVVADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKAHPGAFLGQPSVDHEYADYTEQLKNLCVTVYQHGDDRCRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCSDLILGLDVWNLIPGEGCAELVKVMVKEKIQVEALRTYLFTYSPHYESLSLPTLCEMFDMQKSKAHSIISKMMLSHELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDDGGRGXXXXXXXXXGGRGDSSRGGRXXXXXXXXXWXXXXGYNRPGQTANNRYQGGQ------GGRGRXXXXXXXXXNYIRERRDMGVGPRR 1029
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA) HSP 1 Score: 943 bits (2438), Expect = 0.000e+0 Identity = 590/922 (63.99%), Postives = 702/922 (76.14%), Query Frame = 2
Query: 275 EVRVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMIAKEGVPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKN---------LEDMDSDDWSSXXXXXXXXXGSDDEGDM--LKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGXXXXXX-------------AVVVAGKDKGPPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLLQAGTGVE--VDESEVTDALAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEETDYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDD---GGRGGG 2953
EVRVVKSAKDRS+EAI+TS KIR +KINDWNG Q FDE + +DK+KV IAKEG P F+IKLL LED L TLKDK +KKMSATNTRSLNRMKLQL+KHNK YE EIAD RA P YA ++ XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K L++MDSD+W XXXXXXXXX D E M LKGRA W+K T T D K ++++++ AK E+ XXXXXX V+V+ + +LD +T +++K++E L SRGRK TDP+DVLRQL+ LAY++RR GP RE+P++M+ V+AMFDTLR+ID++MET+MWK+C + RV L+ P+L LG M + +ADL A + +E + A A + TG +K VG+L+ ++ RL +EYTKSLQ INPHT EYI RLKDES +V+LAG +Q YY R G+ + A +ALLQ EHLYY+H+SIA AVH++Q+FT +G LHPAC + P+ + D A HPAA LG P V+ DY ++ LCV +Y+HG DR +TRAMLCHITHHALH RFH ARDLLLMSHLQDNIS DV TQILYNRMMVTLGLCAFR GLI DAHDCLRDVCSSRVKELLAQG+Q NRFQ+KNPEQEKAERRRQ PYHMHINLDLLECCHLT+AML EVP MA+E E+RRR +SK FRR++D F+ QVFTGPPENIRDHVIA AK LM+GDW++CAD+ILGLDVWNLIPGEG E VK M++EKIQ EALRTYLFTYSP YESLSLP LCEMFD+ KAHSIISKM++NQEL G+WDQPT T+VL++ +P+ LQLLAL+FA+KA++LVESNERL+DARTG YGYR+D GGRG G
Sbjct: 49 EVRVVKSAKDRSWEAIKTSCSKIRNHLKINDWNGTQTVFDELCRQMDKAKVNIAKEGTPKFFIKLLVDLEDKLTETLKDKAGVKKMSATNTRSLNRMKLQLKKHNKAYEAEIADCRAKPDEYAGDAGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPKKVKKPTKPLDEMDSDEWXXXXXXXXXXXXXD-EAPMAGLKGRAFWVK-TVATDDAKAKREQRKLAKQEESXXXXXXXXXXXXXXXXAGRGVLVSAR---LGFRLDEKMTPAAVDRKVKEVLQSRGRKGTDPRDVLRQLAALAYVSRRFGPARELPVLMHTVAAMFDTLRSIDDYMETAMWKNCHATLTRVVGCLDECPDLRLGSMTADDMADLQAALPPKDKATEEEDEASAAAPQQTTGTVKAVGNLATFVQRLEEEYTKSLQKINPHTAEYILRLKDESAIVQLAGAIQGYYVRAGDFDRAATVALLQVEHLYYKHDSIALAVHRSQAFTAVYGSPAMLHPACL---GTGPAATSADYAVVHPAAALGAPTVEVVPMDYAALMRDLCVFLYKHGGDRAKTRAMLCHITHHALHGRFHAARDLLLMSHLQDNISMVDVDTQILYNRMMVTLGLCAFRLGLIADAHDCLRDVCSSRVKELLAQGIQQNRFQEKNPEQEKAERRRQMPYHMHINLDLLECCHLTAAMLREVPTMARERGEIRRRHISKLFRRHMDNFDHQVFTGPPENIRDHVIAGAKSLMQGDWRKCADMILGLDVWNLIPGEGQGEKVKVMLREKIQLEALRTYLFTYSPCYESLSLPQLCEMFDLEPRKAHSIISKMLINQELCGAWDQPTNTIVLQRVEPSRLQLLALQFAEKASSLVESNERLLDARTGNYGYREDKWGGGRGDG 962
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA) HSP 1 Score: 790 bits (2041), Expect = 3.260e-269 Identity = 483/910 (53.08%), Postives = 607/910 (66.70%), Query Frame = 2
Query: 281 RVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMIAKEGVPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGXXXXXXAVVVAGKDKG--PPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIAR-RLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLLQAGTGVEVDE-------------SEVTDALAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEET-DYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTEL--------RRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDD 2935
RVV+SAKD++++ ++ V KI KINDW+ +Q FD NK VDK+K I KEG+P FYI+ LA LED L LKDK A KKMS N R+LNRMKLQLR+HNK +E +I ++RANP A EES XXXXXXXXXXXXXXXXXXXX S QKNLEDMDSDDW XXXXXXXXX LKGRA+WLK+T T+ K K+ +E XXXXXX V K KG L+LD T + +KKL E +A+RGRK TDP+D+ + L VLA A+ + G RE+ M+L+++ FD+ R ID++M+ W++C + + +LEA P+ TLG + ++ +ADL A + EV D A ++ G +KVVG+L Y+ RL DEY KSLQ INPHTQEY+ RL+DE + ELAG +QAYY+R G A +ALL+ EH+YY+H+SIA AV AQ+F +G +D+H A ++A G V KSHP ++LG P ++ D + LK LC VY HGDDR RTRA+LCH+ HHALH RFH ARDLLLMSHLQ+ AD+ TQILYNR MV LGLCAFR GL+HDAH CL ++CSSRVKELLAQGVQ R+ DK+ EQEKAERRRQTPYHMH+NLDLLECCHLTSAMLLEVP M E R RV S+HFR+++DIF+RQVFTGPPEN RDH++ AAK L GDW+ CA L++ LDVW+LIPG G AE VKAMV+EKI+AEALRTYLF + Y++LSL LC F+MP+ AH ++SKMM+ +EL G+WDQPT+T+VLR+ +P+ +Q LAL +AD+ A LV++NERL+DAR G GY+DD
Sbjct: 48 RVVRSAKDKAWDGMKAVVSKISNARKINDWHEMQTQFDLLNKQVDKAKTHIQKEGLPRFYIRTLAELEDSLDVALKDKEAQKKMSKANGRALNRMKLQLRRHNKEFEAKITEYRANPDA-EEESXXXXXXXXXXXXXXXXXXXXXXXXXSVEEKPKK-----------------------------VQKNLEDMDSDDWXXXXXXXXXXXXXXXXTGELKGRARWLKRTVTTT-----KRVKKERVIEKXXXXXXXEEVKKDK-KGLVSSLRLDAIQTGADFDKKLTEVMAARGRKGTDPRDLKQALEVLAKAAQEKFGFHRELQCCMHLIASHFDSNRTIDDYMDVPTWRACHGQLTKACSILEAHPQATLGTVDDDELADLALAAMLAKXXXXXXXXXXXXXXXPKEVIDTEAPPDEAGCVKVVGNLLTYVTRLEDEYVKSLQHINPHTQEYVARLRDERPLEELAGSIQAYYDRSGSTETAATVALLRIEHMYYKHDSIAEAVRDAQAFRAAWGSRDDVHAASRKATA-----GVSTVEKSHPGSWLGAPTTPSTDSCDTAKSLKELCGYVYDHGDDRCRTRALLCHVAHHALHGRFHAARDLLLMSHLQEVAHDADIETQILYNRAMVLLGLCAFRSGLVHDAHSCLAEICSSRVKELLAQGVQSARWSDKSDEQEKAERRRQTPYHMHVNLDLLECCHLTSAMLLEVPAMVVEEARNKQLRGAPPRTRVTSRHFRKHMDIFSRQVFTGPPENTRDHILCAAKALALGDWRECARLVVELDVWDLIPGTGEAEKVKAMVREKIKAEALRTYLFARADAYDALSLERLCATFEMPERTAHGLVSKMMITKELRGAWDQPTKTIVLRRLEPSPVQALALAYADRCAALVDANERLLDARAGGKGYKDD 916
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA) HSP 1 Score: 788 bits (2035), Expect = 1.270e-267 Identity = 507/913 (55.53%), Postives = 637/913 (69.77%), Query Frame = 2
Query: 275 EVRVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMIAKEGVPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGXXXXXXAVVVAGKDKGPP-------LKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTL-RNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLLQAGTG-VEVDESEVT----------DALAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEET-DYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDDGGRGGG 2953
E RVV+S KD++++AI+ + K++ +M+INDW GIQ F++ NK ++KSK +I +EG+P FYI+LLA LED+LA LKDK AIKKM+++N+RSLNRMKL L+KHNK +E +A +R NP E S XXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X LKGRA+WLKKT + K + XXXXXX + G +++D +IT+EELE K+ E +ASRGR+ T+ +D+LRQL LAY AR+ GP E+P++ +LVSA FDT R ID++M+T+ WK + RV +LE +L L + + +ADL+ AG G ++V + + DA A ++VVG+LS YM R+ +EY KSLQ INPHTQEYI RLKDE+++V LA KVQAYY R G A + L+ EH YY+H+SIA AV +AQSFT +G LHP C A +G LD HPA+ LG P D D +++ + + +Y+HGDDR RTRAMLCHITHHA+HDRFH ARDLL MSHLQD I DVSTQIL+NR MV LGLCAFR G+I + H C+ +VCS R KELLAQGVQ +R+ ++NPE+EKAE+RRQ PYHMHINLDLLECCHLT+AMLLEVPN+A + R++V+S+HFR+ DI++RQVFTGPPEN RDHV+A+A+ L EG W++ A L+LGLDVWNLIPGEGSA VK M++EK++ EALRTYLFTYS HY SLSL LC MFDMPK K HS++SKMM+ +E+ SWDQPTETVVL K +P+ LQ LAL+FA+KA+ LVESNERL+DAR G YR+D GR GG
Sbjct: 64 EGRVVRSQKDKAWDAIQNGIKKVKNSMRINDWGGIQTGFEDLNKLMEKSKTLIEREGMPQFYIRLLAQLEDLLAVALKDKEAIKKMNSSNSRSLNRMKLVLKKHNKNHEAALAKYRENPVESEGEESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------QLKGRARWLKKTPAETTKKAKXXXXXXXXXXXXXXXXXXXXXXXAQALGDKAAAQQGLVRVDENITAEELEVKVLEAVASRGRRGTNIRDLLRQLQALAYAARKFGPRVELPVLFHLVSAQFDTTSRQIDDYMQTTSWKHVYACLMRVVSVLEGHQDLKLAVVADTDLADLVLAGKGELKVQDKPIDEEGEGQEVEGDAEAATNDPNEIQVVGTLSAYMRRINEEYVKSLQHINPHTQEYIARLKDEALIVALAAKVQAYYVRVGMPTEAASMCLMGLEHTYYKHDSIALAVQRAQSFTALWGDRALLHPGCV---ACTKMEGKLDAETCHPASALGTPTCDFSSLPDMAQEVSDMALFIYRHGDDRLRTRAMLCHITHHAMHDRFHQARDLLFMSHLQDTIGHTDVSTQILFNRAMVLLGLCAFRAGMILEGHYCMTEVCSGRTKELLAQGVQQSRYHERNPEKEKAEKRRQMPYHMHINLDLLECCHLTAAMLLEVPNIALDPG--RKKVISRHFRKCRDIYSRQVFTGPPENTRDHVMASAQALEEGQWRQAAKLLLGLDVWNLIPGEGSAAKVKVMLEEKLKVEALRTYLFTYSSHYNSLSLNQLCSMFDMPKPKVHSLLSKMMMAEEIQASWDQPTETVVLHKVEPSPLQQLALQFAEKASFLVESNERLLDARCGGGAYREDWGRRGG 956
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA) HSP 1 Score: 784 bits (2025), Expect = 1.860e-266 Identity = 515/938 (54.90%), Postives = 648/938 (69.08%), Query Frame = 2
Query: 131 SKFWAHESGASGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVRVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMIAKEG-VPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-QKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLK-KTDDTSDIKK---RKDEKRAAKVEDGXXXXXXAVVVAGKDKGPPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLL--QAGTGVEVDESEVTDALAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEETDYTEQLKLLCVTV-YQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILG-LDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTG 2914
S+FWA +S ASG+E XXXXXXXXXXXXXXXXX XXXXXX E R V SAKD+++ A+ + V I+ +MK NDW IQ FD+ N+ V+K + +I KEG VP FYI+LLA LED+L TTLKDK A KKM+ N R+LNRMKL LRKHN +E EI +R NP E S ++SD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +K+L++MDSDDW+SXXXXXXXXX D L GR KWLK T +T ++K +K E+ + K + +K + DI+ +L+ K+ E ++ RGR+ TDPK++++ L++L + ++ GP EIP + +LVS+ FD RN+D+FM+ +WK+C ++ R++ +L PEL L +G + +AD++ Q G EV E D E ++++G+L ++ RL +EYTK+LQ INPHT EY+ RL+ ES +V+L VQ YYER +M A +ALL EH+YY H+SIA+AV KAQ F K+G DLHPAC S A + DG D A HPA+ G+P + + D ++ C V Y+HGDDR RTRAMLCHI HHA HDRF+ ARDLLLMSHLQ++I ADV TQIL+NR MV LGLCAFR GLI DAH CL D+CSSRVKELLAQG+Q R+ +KNPEQE AERRRQTPYHMHINLDLLE CHLT+AMLLEVPNMA E R RV+S+HFR+++D + RQVFTGPPEN+RDHV+AAAK L G+WK+C +LIL +D+WNLIPGE S E VK M+ EKI+AEALRTYLF YS HY+SLSLP LC MF + K AH IISKMM+NQEL+ SWDQPT+TVVL K +P LQ LAL++ADKA+ LVESNER ++A G
Sbjct: 2 SRFWAGQSSASGTEDXXXXXXXXXXXXXXXXXKENRWAVDXXXXXXE-ENRKVVSAKDKAWIAMESDVKNIKNSMKNNDWAQIQETFDDLNRKVEKQQNLIKKEGGVPRFYIRLLAELEDLLLTTLKDKDAQKKMNKANGRALNRMKLNLRKHNLKFETEIKAYRENPEEEKEGGSGSS-----------------DNSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGKKKAPKKSLDEMDSDDWASXXXXXXXXXXEDVVDKALTGRDKWLKTNTVETKRVRKDKTKKPEQESKKADKSKTS----------NKRAEFSVSSDISEADLKHKIIELVSMRGRRNTDPKELIKNLNMLCQVTKKFGPRCEIPALCHLVSSFFDMQRNMDDFMDLPIWKTCHGHMMRISQILNENPELVLTSIGADDIADMILAQQGNLEEVKEEPKVD-----EDANKIQIIGNLVNFVNRLDEEYTKALQKINPHTVEYVVRLRMESQLVKLCTTVQQYYERIEDMKNAASVALLCIEHVYYMHDSIAAAVFKAQKFAEKWGAYSDLHPACMSSDAGS-EDGKFDAASVHPASIGGKPTITDKLEDVGAFIQEQCHRVIYKHGDDRTRTRAMLCHIAHHAAHDRFYEARDLLLMSHLQEHIGHADVHTQILFNRAMVMLGLCAFRAGLIWDAHQCLSDICSSRVKELLAQGLQSMRYSEKNPEQENAERRRQTPYHMHINLDLLEGCHLTAAMLLEVPNMATEDVSERPRVISRHFRKHMDFYERQVFTGPPENVRDHVLAAAKALTTGEWKKCTELILDDMDIWNLIPGEKSGEAVKKMLLEKIKAEALRTYLFAYSAHYDSLSLPQLCNMFALEKRTAHGIISKMMINQELHASWDQPTDTVVLHKVEPTHLQALALQYADKASMLVESNERFLEASLG 905
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: F0Y6I4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I4_AURAN) HSP 1 Score: 732 bits (1890), Expect = 8.170e-248 Identity = 463/896 (51.67%), Postives = 571/896 (63.73%), Query Frame = 2
Query: 281 RVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMIAKEGVPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGXXXXXXAVVVAGKDKGPPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARR-LGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLLQAGTGVEVDESEVTDAL---AEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKV------DHEETDYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTEL--RRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRD 2932
RVVKSAKDR+++ ++ + KI + KI DWNGIQ F+ NK VDK+K+ I KEG+P FY++ LA LED L LKDK A KKMSA+N RSLNRMKL LRKHNK YE +IA ++A+P A E +D+ SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++ LKGRAKWLK T T+ K P ++ E +KKL E +ASRGRK TD +++L L LA A+R G RE+ +M+L++A FD R ID++M+ + W+SC + RV +L A P G G + A + +KVVG+L ++ RL DEY KSLQ INPHT EY+ RL+DE+ + +LA VQAYY R G+ A +ALL+ EH+YY+HESIASAV AQ++ D +KSHP A+LG D D + ++ LC VY HGDDR RTRA+LCH+ HHALH RF+ ARDLLLMSHLQD +DV TQILYNR MV LGLCAFR GLIHDAH CL ++CSSRVKELLAQG+Q RF DKNPEQEKAERRRQTPYHMHINLDLLECCHLT+AMLLEVPNM+ E+ +R +S+HFR+++DIFNRQVFTGPPEN RDHV+ AAK L GDWK CADL+L LDVW L+PG G + VKAM+++KI+AEALRTYLF YS Y++LSLP LC+MF +PK+ AH ++SKMM+N+EL G+WDQPTET+VL + +P+ LQ LAL +ADKAA LVESNERL+DAR G +GY+D
Sbjct: 49 RVVKSAKDRAWDGMKAVIAKIGNSKKIGDWNGIQTEFENLNKMVDKAKMHIMKEGLPRFYVRTLAELEDFLFEALKDKEAQKKMSASNGRSLNRMKLTLRKHNKTYESQIAAYKADPDAPDAE----------------------DDAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETG--------------------ALKGRAKWLKTTVVTT-------------------------------KRP-------MSGETFDKKLLEVVASRGRKGTDARELLAALEALAGKAKRSFGYARELGALMHLIAAQFDANRTIDDYMDVATWRSCHGQLGRVVAVLSAHP------------------GKGEDXXXXXXXXXXXXXAPNDDPDAVKVVGNLLTFLARLEDEYVKSLQRINPHTHEYVSRLRDEAPLTDLAAGVQAYYVRVGDDKAAATVALLRVEHMYYKHESIASAVRDAQAYRAN----------------------ERDSSKSHPGAWLGAATAAATAPDDEVVGDASASVRKLCEYVYAHGDDRCRTRALLCHVAHHALHGRFYVARDLLLMSHLQDTAYMSDVETQILYNRSMVMLGLCAFRNGLIHDAHACLAEICSSRVKELLAQGMQSARFSDKNPEQEKAERRRQTPYHMHINLDLLECCHLTAAMLLEVPNMSVEAGGAGGHKRPISRHFRKHLDIFNRQVFTGPPENTRDHVLCAAKALGVGDWKTCADLVLRLDVWALVPGAGEGDRVKAMIEDKIKAEALRTYLFAYSSAYDALSLPQLCDMFQLPKNVAHGLVSKMMINRELKGAWDQPTETIVLHRLEPSPLQALALHYADKAAALVESNERLLDARAGGHGYKD 824
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A7S4IUV2_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUV2_9STRA) HSP 1 Score: 736 bits (1901), Expect = 6.480e-246 Identity = 515/959 (53.70%), Postives = 640/959 (66.74%), Query Frame = 2
Query: 275 EVRVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMIAKEG-VPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLKKTDD-----TSDIKKRKDEKRAAKVEDGXXXXXXAVVVAGKDKGPPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPE-LTLGQMGNEVVADLL---QAGTG---------------------------VEVDESEVTDALAE---VEKTGVLK--------VVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEE---TDYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQA-DVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTE--------LRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDD-------GGRGG 2950
E RVV+SAKDR+F++ +T V IR MKI D++ +Q FD K V KSK +I + G VP F+I+LL LED + ++L DK KK+S R+LNRMKL LRKHNK YE + ++R NP S XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX DE LKGRA+WLKKT T D R + ++AA+ D XXXXX G L + +T+ L++K++E ++SRGRK TD + +LRQL L+ +A R GP E+P++M++V+A FD LR +D+FM+ WKSC Y+ R+A LE E TLG + + AD L QA G E ESE D AE +EK G + V+GSLSL++ RL +EY KSLQ I+PHT EY+ RL+DE+ +VEL GK QAYY R G A+LA L+ EHLYY+H++IA V +A F +G+ E LHPAC SA A + D +KSHPAA LG+P V E D + + LC VY++G DR +TR+MLCHI HHALHDRF ARDLLLMSHLQD IS A DVST +L+NRMMVT+GL AFR G I DAH CL DVCS RV+ELLAQGV RF DK EQEKAERRRQTPYHMHIN+DLLE CHLTSAMLLEVPNMAQ R RV+S+ FR++ DI++R VFTGPPE RD+V+ A++ LM GDWK+C++L+ GL+VW+LIPGE S E +K+++ EKI+ E LRTYLF YS Y+SLSL TLC+MFDM K++ HS++SKMM+N EL+ SWDQPT T+VLR +P+ LQ+LAL+FA+KAA LVE+NERL+DA++G YG+RD+ GGRGG
Sbjct: 128 EERVVRSAKDRAFDSFQTHVKAIRNGMKIRDFSRMQTEFDALVKVVAKSKTIIQRHGGVPRFFIRLLCDLEDFVKSSLADKVGFKKLSPAQGRALNRMKLTLRKHNKSYEAAMTEYRMNPVVSESASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADEFAQLKGRARWLKKTTAVVEKVTKDKAGRAEARKAAR--DAAXXXXXXXXXXGAGPSKSLIPEKALTAATLDRKVKEVVSSRGRKGTDNRSILRQLEGLSRLAVRFGPRFEVPVLMHVVTAQFDLLRTMDDFMDAKTWKSCAGYLWRIASALEDGEEKYTLGHLSADEAADDLLATQAAVGGKMXXXXXXXXXEGAMAAVAADEKLINPETGESETEDERAERIRLEKEGKMTPEELRTIIVIGSLSLHLTRLDEEYIKSLQRISPHTSEYVTRLRDEARLVELLGKAQAYYTRIGSKPEAAELAQLRVEHLYYRHDTIADQVDRAALFHETYGEAELLHPACI--SADADEGKSNDYSKSHPAAALGRPSVATESEAPVDSAQLITDLCTYVYKYGSDRSKTRSMLCHIFHHALHDRFLEARDLLLMSHLQDTISNAGDVSTMLLFNRMMVTMGLAAFRLGRIWDAHQCLGDVCSGRVRELLAQGVSSGRFSDKTDEQEKAERRRQTPYHMHINMDLLEACHLTSAMLLEVPNMAQAGAAGGDDTGGPRRARVISRQFRKHHDIYDRSVFTGPPEQTRDYVMVASRALMRGDWKKCSELLGGLEVWDLIPGEESGEKIKSILVEKIKVEGLRTYLFAYSSQYDSLSLETLCKMFDMGKNEVHSVVSKMMINHELHASWDQPTGTIVLRNVEPSALQVLALQFAEKAAGLVEANERLLDAKSGTYGFRDEYWRGDGQGGRGG 1082
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A7S2BS49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BS49_9STRA) HSP 1 Score: 710 bits (1833), Expect = 1.240e-241 Identity = 392/716 (54.75%), Postives = 493/716 (68.85%), Query Frame = 2
Query: 851 LEDMDSDDWSSXXXXXXXXXGSDDEG--DMLKGRAKWLKKTDDTSDIKKRKD--EKRAAKVEDGXXXXXXAVVVAGKD-KGPPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLLQAGTGVEVDESEVTDALAEVEK-------TGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEETDYTEQLKLLCV-TVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILG-LDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDD-GGRGGG 2953
L++MDSD+W S SDD G LKGRAKWLK + +D + RKD EK AAK + X K + DIT+ EL +K+ E +A RGR+ DP+++ R LSVLA ARR EIP + +LVS+ FD R++D +++ W+SC +++RV ++L ++ L LG G + +AD++ A G D E + AE K +K++G+L ++ RL +EYTK+L +INPHT EY+ RL+ E+ + L Q YYER G+M A +ALL+ EH YY+H+SIA AV KAQ F K+G+ DLHPAC +A+ S+ + HPAA G+P +D D +K LC VY+HGDDR RTRAMLCHI HHALHDRF+ ARDLLLMSHLQ+NI DV+TQIL+NR MV LGLCAFR GLI +AH CL D+CSSR KELLAQGVQ R+ DKNPEQEKAERRRQTPYHMHINL+LLE CHLT+AMLLEVPNMA E R RV+S+HFR+Y+D F+RQVFTGPPEN+RDHV+ AAK L GDWKRCADLIL +D+WNLIPGE +A+ VK M+K+KI+ EALRTYLF YS HY+SLSLP LC MFD+ K AH +ISKMM+NQE++ SWDQPTETVVL K +P LQ LAL++A+KA+ LVESNER +DA G Y+DD G RGGG
Sbjct: 1 LDEMDSDEWQSDSSSDSD---SDDGGVDPTLKGRAKWLK-VNTVADTRVRKDASEKEAAKAKRAEEKLKXXXXXXXXXAKAATYAVAEDITASELSRKITEVVAQRGRRNMDPREINRNLSVLASAARRFSAKIEIPALFHLVSSYFDAQRDMDSYLDFKTWRSCYNHLSRVVNILNSQENLVLGMFGEDDMADMVLAQQGALKDLPEEEEEPAEEAKGDGDGEDENTIKIIGNLVTFVKRLEEEYTKALIAINPHTSEYVTRLRMEAQLTHLCATTQQYYERVGDMGQAAVMALLRIEHTYYKHDSIAEAVFKAQKFAEKWGQYADLHPACLSPTAALSSEVKPETL--HPAAMGGKPAIDAVFEDQAVLIKELCHRVVYKHGDDRTRTRAMLCHIAHHALHDRFYDARDLLLMSHLQENIGHTDVTTQILFNRAMVMLGLCAFRLGLIFEAHQCLSDICSSRYKELLAQGVQSMRYSDKNPEQEKAERRRQTPYHMHINLELLEGCHLTAAMLLEVPNMATEELSERPRVISRHFRKYMDFFDRQVFTGPPENVRDHVLTAAKSLTTGDWKRCADLILDKMDIWNLIPGENAAQKVKDMLKDKIKCEALRTYLFAYSAHYDSLSLPQLCVMFDLEKRIAHGVISKMMINQEVHASWDQPTETVVLHKVEPTHLQSLALQYAEKASMLVESNERFLDASVGGQSYKDDWGNRGGG 710
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA) HSP 1 Score: 717 bits (1851), Expect = 1.070e-239 Identity = 500/944 (52.97%), Postives = 635/944 (67.27%), Query Frame = 2
Query: 278 VRVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVDKSKVMI-AKEGVPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLKK--TDDTSDIKKRKDEKRAAKVEDGXXXXXXAVVVAGKDKGPPLKLDL----DITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYINRVADLLEARPE-----LTL------GQMGNEVVAD-------LLQAGTGV-------------EVDESEVTDALAE-----------VEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDH----EETDYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQA-DVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQES-----TELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRD 2932
VRVVKSAK R+FE+ +V +IR MKI D+ +Q F+E K + KSK +I A GVP F++++L LED + T+L DK KK+S TN R+LNRMKL LRKHNK Y+ + ++R NP + SSXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXG + LKGRA+WLKK TD K +++KR A XXXXXX + +T L KK+ E +A RGRK TD K VLRQL L+ +A R GP E+P ++++++A FD +R +D++MET W+SC EY+ RVA++L+ E L L G MG V+ + +AG G E+E D AE E+ ++V GSL+L++ RL +EY KSLQ I+PHT EY+ RL+DE+ +V+L K QAYYER G A+LA L+ EHLYY+H+SIA+ V +A F +FG+ LHPAC + + G++D +K HPAA G+P V+ E D + + LC VYQHG DR RTRAMLCHI HHALHDRF ARDLLLMSHLQD IS A DVST IL+NRMMVTLGL AFR G I DAH CL DVCS RV+ELLAQGV RF DK+ EQEKAE+RRQ PYH HINLDLLE CHLTSAMLLEVPNMA + + R RV+S+ FR+ DI++RQVFTGPPE RD+V+ AAK LM+GDWK+C++L++GLDVW L+PG+ S E ++AM+ +KI+ E LRTYLF +S Y+SLSL LC MF++ K++ HS++SKMM+N+ELY SWDQPTET+VLRK +P++LQ++AL++++K A+LVE+NERL+DA++G YGY+D
Sbjct: 55 VRVVKSAKTRAFESFEANVKQIRNAMKIRDFAKVQNQFEELTKSMTKSKKLIDAHGGVPRFFVRILVDLEDFVKTSLADKAGFKKLSPTNGRALNRMKLTLRKHNKQYDAIMEEYRKNPVV-SGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGE----LKGRARWLKKVSTDTKRGPKDAEEKKRRAXXXXXXXXXXXXXXXXXXXXXXXTSKSIIPESSLTPSLLVKKIGEVVALRGRKGTDNKVVLRQLEGLSRLAARFGPRSEVPALIFVITAQFDLVRTLDDYMETKTWRSCAEYLGRVANILDGGEEKYKLDLPLPDEDAGGLMGGVVLPEGAGKMKAAAKAGGGAMAAVAADEKLINPHTGETETADERAERIRIETEEKMSPEELHTIRVPGSLALFLTRLDEEYNKSLQKISPHTIEYVARLRDEARLVDLQMKFQAYYERIGSTAEAAELAQLRVEHLYYRHDSIATQVDRASKFYERFGEASMLHPACVSDN---DTRGSVDYSKVHPAASCGKPSVEDTDAAESVDSAKLIADLCTYVYQHGSDRSRTRAMLCHIYHHALHDRFLDARDLLLMSHLQDTISSAGDVSTMILFNRMMVTLGLAAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRFSDKSAEQEKAEKRRQIPYHQHINLDLLEACHLTSAMLLEVPNMAASAEGDAGSSRRTRVISRTFRKNHDIYDRQVFTGPPEQTRDYVMRAAKALMKGDWKKCSNLLVGLDVWKLVPGDDSIEKIRAMLVDKIKLEGLRTYLFAFSSQYDSLSLEQLCGMFELSKNEVHSVVSKMMINRELYASWDQPTETIVLRKVEPSSLQVMALQYSEKVASLVEANERLLDAKSGNYGYKD 990
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Match: A0A067CNB7_SAPPC (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNB7_SAPPC) HSP 1 Score: 672 bits (1733), Expect = 2.720e-223 Identity = 445/906 (49.12%), Postives = 598/906 (66.00%), Query Frame = 2
Query: 278 VRVVKSAKDRSFEAIRTSVGKIRTTMKINDWNGIQANFDECNKHVD--KSKVMIAKEGVPSFYIKLLAHLEDVLATTLKDKPAIKKMSATNTRSLNRMKLQLRKHNKGYEKEIADFRANPAAYAEESSXXXXXXXXXXXXXXXXXXXXEDSDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKNLEDMDSDDWSSXXXXXXXXXGSDDEGDMLKGRAKWLKKTDDTSDIKKRKDEKRAAKVEDGXXXXXXAVVVAGKDKGPPLKLDLDITSEELEKKLRECLASRGRKATDPKDVLRQLSVLAYIARRLGPVREIPIIMYLVSA-MFDTLRNIDEFMETSMWKSCREYINRVADLLEARPELTLGQMGNEVVADLLQ---------AGTGVEVDESEVTDALAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMNVVADLALLQAEHLYYQHESIASAVHKAQSFTNKFGKTEDLHPACTVSSASAPSDGALDVAKSHPAAFLGQPKVDHEETDYTEQLKLLCVTVYQHGDDRDRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADVSTQILYNRMMVTLGLCAFRRGLIHDAHDCLRDVCS-SRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQVFTGPPENIRDHVIAAAKRLMEGDWKRCADLILGLDVWNLIPGEGSAEVVKAMVKEKIQAEALRTYLFTYSPHYESLSLPTLCEMFDMPKSKAHSIISKMMLNQELYGSWDQPTETVVLRKEDPNTLQLLALKFADKAANLVESNERLIDARTGAYGYRDDGGRGGGR 2956
VRVV SAKD++ A++T+ I +KINDW+ IQ FD K +D K+K I G P +YI+++A LED + T+LK+K + KKMS N+++L RMK +++KHN+ K++ ++RA+P+A+ E XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXX X D+W+S XXXXXXXX D ++LKGRA+WLK T + + KV+ V V + K P + DL ++ +KK++E +A RG++ TD + L L L +RRLGP RE+ MY+V A MFDT ID+ + T +WK + + DLLE TL + +E AD+++ A E D+ V D L GV+KV G L+ ++ RL DEYTKSLQ ++PHT EYI RL DE+++ ELA +VQAYY R + A +AL++AE +YY+HESIASA+H + + K+G+ LHPA ++A A A + + HPA+ LGQP V+ D +L LC+ VY+H DDR +TRAMLCHI HHA+HDRFH ARDLLLMSHLQ+ I D++TQIL+NRMM LGLCAFR GL+ +AH CL ++C+ S+ KELLAQG+ R Q+++P+QE+ ERRRQ PYHMHINL+LLE CHLTSAMLLEVPNM T+ RRRV+SK FR+ ++ +R VF GPPEN RDH+++AAK + +G+W+ +LI GL VW+L PG G +E VKAMV+ KIQ EALR+YL +S YE+L+L LC MF + HS++SKMM+N+EL G+WDQ ++++VL K + LQLLAL+ +DK LVE+NER++D R+ A +D+ G R
Sbjct: 33 VRVVVSAKDKALTALQTACALITNFLKINDWSKIQGEFDVMAKTMDNAKAKQAIQANGYPKYYIRVMAQLEDAMTTSLKNK-SDKKMSKENSKALIRMKGKIKKHNEAIVKQLEEYRADPSAFESEPEXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXDKDSXXXXXXXXXXXDNWASSXXXXXXXXXXDANVNLLKGRARWLKATPAVNT--------KGPKVKGPKAPRAEKVKVVAEAKKPAAEEDLKLSKSGFDKKIKEVIALRGKRGTDIGEQLSALRKLVQYSRRLGPARELTATMYMVGATMFDTSSKIDKVLSTRLWKQAHSDMQTILDLLEKNTGFTLAPLTSEDQADIIRVTASRNNADATADDEEDDDSVADHLPVAGSKGVIKVSGDLAAFIERLTDEYTKSLQQMDPHTAEYIARLYDEALLSELARRVQAYYVRISDFVRAASVALIRAELMYYKHESIASALHVSNAKRAKYGEPALLHPASESTTAKAVPIKAYNPSLMHPASILGQPTVEVAPLDIETELNDLCLFVYKHADDRSKTRAMLCHIYHHAVHDRFHEARDLLLMSHLQETIVHTDIATQILFNRMMAQLGLCAFRSGLMWEAHACLSEICTGSKTKELLAQGLASFRHQERDPDQERLERRRQVPYHMHINLELLELCHLTSAMLLEVPNMVLSRTQDRRRVISKAFRKLLEFHDRLVFAGPPENTRDHIVSAAKAMAQGNWQYSKELICGLAVWDLFPGAGVSERVKAMVQHKIQVEALRSYLMAFSDAYEALNLAQLCAMFGLDSKTVHSVVSKMMINEELQGAWDQGSQSIVLHKVERTRLQLLALQLSDKIGTLVENNERMMDLRSAALSTKDEASTAGNR 922 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15707.1 >prot_C-linearis_contig8.15707.1 ID=prot_C-linearis_contig8.15707.1|Name=mRNA_C-linearis_contig8.15707.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1020bp MASKFWAHESGASGSESESDSDSDSSMGGGGGAAGARRQWAVDSDSESEEback to top mRNA from alignment at C-linearis_contig8:2742479..2758564- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15707.1 ID=mRNA_C-linearis_contig8.15707.1|Name=mRNA_C-linearis_contig8.15707.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=16086bp|location=Sequence derived from alignment at C-linearis_contig8:2742479..2758564- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:2742479..2758564- >mRNA_C-linearis_contig8.15707.1 ID=mRNA_C-linearis_contig8.15707.1|Name=mRNA_C-linearis_contig8.15707.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6120bp|location=Sequence derived from alignment at C-linearis_contig8:2742479..2758564- (Chordaria linearis ClinC8C monoicous)back to top |