mRNA_C-linearis_contig8.15693.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: D7G8E8_ECTSI (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E8_ECTSI) HSP 1 Score: 370 bits (950), Expect = 3.400e-123 Identity = 224/386 (58.03%), Postives = 243/386 (62.95%), Query Frame = 1
Query: 85 VRLEGRQWVSAGSKKAKVGVYSIAGEKVHDPSWKNQDAGLAIAPVGRGEGQALFAIFDGHGVNGRQASNECLERLPKYLVSAF-RSGNPASALRRSCQRLHRDLASGAAGDCTRSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPA---------IAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGR----------------------------------LVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRKV 1110
VRLEGR W SAGS + VG+YSIAGEK HDP WKNQDAGL IAP R EGQALFAIFDGHG NG QAS EC+ERLPK+L SA +SG+PASALRRSCQRLH DLA+G AGDC RSGTTLCAAVL GRRLTVANVGDSGCLRL R T + I GK + AS T P ++AGG+ LV ERLSRDHKPES GELERI+AAGG+VFPLPR G G G ++ T AR AG+PRVW A GDGPGLAMSRSIGDKMAHSVGVTYEPEI+EFDLD RSDVMLV ASDGVWDV+SAEDIRKV
Sbjct: 2 VRLEGR-WASAGSTEPNVGIYSIAGEKAHDPLWKNQDAGLVIAPFDRREGQALFAIFDGHGKNGGQASRECMERLPKHLASASSQSGSPASALRRSCQRLHHDLATGVAGDCGRSGTTLCAAVLAGRRLTVANVGDSGCLRLSRSTAAASXXXXXXXXXXXXXIPGKAALASDRGT--------------------PDVVDKAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLVTERLSRDHKPESKGELERIRAAGGIVFPLPRS-----GSGGXXXXXXXXXXXXXXXEGSKKGLKTAARGIAAGIPRVWTASGDGPGLAMSRSIGDKMAHSVGVTYEPEITEFDLDKRSDVMLVFASDGVWDVLSAEDIRKV 361
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A835YTT3_9STRA (Phosphatase 2C-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT3_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.400e-30 Identity = 116/327 (35.47%), Postives = 152/327 (46.48%), Query Frame = 1
Query: 133 KVGVYSIAGEKVHDPSWKNQDAGL---AIAPVGRGEGQALFAIFDGHGVNGRQASNECLERLPKYLVSAFRSGNPASALRRSCQRLHRDLASGAAGDCTRSGTTLCAAVLNGR-RLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVW-RAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLD-PRSDVMLVLASDGVWDVMSAE 1095
+ GV SI G K +P W+NQD + A+ G G+ +FA+ DGHG G + C ERLP+ L +A G+ A R+C LH DLASG DC SG T ++ R +TVAN+GDS C+ L R GG V G ++ ++ A L+ DHKP+ E RIQAAGG V R+ G +G I+ PA RVW + G+ GLAMSRSIGD +AH+ GV+ +PE+ E LD D LVLASDGVWDV+ A+
Sbjct: 43 RAGVCSIQGLKPGNPRWENQDNFVMEEALDIDGGGDRLRVFAVLDGHGEAGHLVTRRCRERLPQLLRAA--RGDAA----RACVALHEDLASGVHVDCQCSGATCVVVTISARGAVTVANLGDSRCV--LGRWEC-----------------------GGXXXXXXXXXXXMV--------GRAQRQVCAVPLTTDHKPDRPDERARIQAAGGQVGS--RQLIVGSGPAGPIRIPMGPA-------------------------RVWYQVRGETMGLAMSRSIGDVIAHAAGVSAQPEVVEHCLDRDAGDAFLVLASDGVWDVLDAQ 303
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A2P6TSH7_CHLSO (Protein-serine/threonine phosphatase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSH7_CHLSO) HSP 1 Score: 110 bits (274), Expect = 3.230e-23 Identity = 95/311 (30.55%), Postives = 132/311 (42.44%), Query Frame = 1
Query: 175 PSWKNQDAGLAIAPVGRGEGQALFAIFDGHGVNGRQASNECLERLPKYLVSA-FRSGNPASALRRSCQRLHRDLASGAAGDCTRSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQEL---TTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAE 1095
P NQDA A +G F +FDGHG G + + ++LP L + NP AL + ++ L + D + SGTT C AVL GR L +ANVGDS + +A +P+A S A S GAG+ +G LVA LS+D P + E R+ AG V L Q G+++ L T D PR+W G PG A +RSIGD A +GV +PE+ L P+ +VLA+DGVW+ +S++
Sbjct: 84 PDKANQDAVRAAEGLGGNAEAHFFGVFDGHGEFGTECAQFVKDKLPTVLAGEPTLASNPDKALHSALVSVNSQLHASPVDD-SLSGTTACCAVLQGRTLYIANVGDSRAV--------------VAERPAAGSK-----------------AASEGSEGAGSSSGSGATELVARDLSQDQTPFRLDECHRVLQAGARVLTL------------------------DQLEGLKDPGLPCWTNEADCDGDPPRLWSPNGMFPGTAFTRSIGDSAAEDIGVIPDPEVLATQLGPQH-AFVVLATDGVWEFISSQ 337
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A7S0BX79_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BX79_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.260e-19 Identity = 99/326 (30.37%), Postives = 136/326 (41.72%), Query Frame = 1
Query: 127 KAKVGVYSIAGEKVH---DPSWKNQDAGLAIAPVGRGEGQALFAIFDGHGVNGRQASNECLERLPKYLVS-AFRSGNPASALRRSCQRLHRDLASGAAGDCTRSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSA 1092
K V YS +K H +P KNQDA L +A + + DGHG +G ++ + LP + + S + A R + R+ + L D SGTTL AV+ G R+ N+GDS I GK D T G+++AE L+ DHKP+ E ERI A+GG VF + D GI G PRVW D PGLAMSRS+GD +AH+ GV EPEI+E +LDP +D ++ A+DG+W+ M +
Sbjct: 60 KCAVTEYSGVSKKGHAPYNPRKKNQDA-LILAEDAT-TNTLVLCVLDGHGEHGDGVASFIRDILPGEMFNHPSWSTDVKKAAREAILRVEQKLLCNFRIDTEFSGTTLSMAVIRGSRIYGVNIGDSRV---------------IIGK-----DDGT-------------------------------GKIIAEDLTFDHKPDCPEEKERILASGGRVFAVEYDD------------------------GID------------GPPRVWLGHMDVPGLAMSRSLGDAVAHTAGVISEPEITERELDPATDKFILCATDGLWEFMDS 296
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A1R2BZE2_9CILI (PPM-type phosphatase domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BZE2_9CILI) HSP 1 Score: 99.0 bits (245), Expect = 2.610e-19 Identity = 90/291 (30.93%), Postives = 121/291 (41.58%), Query Frame = 1
Query: 241 LFAIFDGHGVNGRQASNECLERLPKYLVS-AFRSGNPASALRRSCQRLHRDLASGAAGDCTRSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRKV 1110
+FA+ DGHGVNG S R P L+S + P AL SC RL++++ S D SG+T + ++ G++L ANVGDS L G L G N + +A LSRDHKP E ERI AGG V A+ G G RVW + PGLAMSRS GDK+A SVGV PEI EF+++ D +V+ SDG+++ ++ ED+ K+
Sbjct: 159 IFAVADGHGVNGEHVSGYIKNRFPLILLSNPYFLSAPIRALTASCIRLNKEINS-QDFDTNFSGSTFVSIIIRGKKLWCANVGDSRALL-------------------------------GRQLTDKTGTKGNCN------------HWMAIALSRDHKPNENDESERIYKAGGRV------------------EAYQDENGNP-----------------FGPSRVWLKSQNLPGLAMSRSFGDKVASSVGVICHPEILEFEIN-NDDKFIVIGSDGIFEFLTNEDVVKI 369
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A7S2UGJ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UGJ7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.780e-19 Identity = 94/327 (28.75%), Postives = 141/327 (43.12%), Query Frame = 1
Query: 136 VGVYSIAGEKVH---DPSWKNQDAGLAIAPVGRGEGQALFAIFDGHGVNGRQASNECLERLPKYLVS--AFRSG-NPASALRRSCQRLHRDLASGAAGDCTRSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAED 1098
V YS +K H +P KNQDA L +A + + DGHG +G S ++L ++ A+ + ASA + Q+L + D SGTTL A++ G +T N+GDS + +G + GK +VAE L++DHKP++ E+ERI AAGG VF + D GI G PRVW D PGLAM+RSIGD +AH+ GV +PE +E +LDP +D +++A+DG+W+ +++++
Sbjct: 105 VSEYSGVSKKGHAPYNPRKKNQDA-LVMADD-PSTNTLILCVLDGHGEHGDGVSAVFRDQLAAEMIHHPAWETDVKKASAF--AIQKLEDAVMRDFRIDTEFSGTTLSMAIIRGNTITGVNIGDSRVI----------IGKEVDGK------------------------------------------MVAEELTQDHKPDTPKEMERILAAGGRVFAVEYDD------------------------GID------------GPPRVWLGHMDVPGLAMARSIGDAVAHTAGVISDPEFTERELDPATDRFVIVATDGLWEFITSDE 339
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A835YZ58_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ58_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.150e-19 Identity = 88/274 (32.12%), Postives = 119/274 (43.43%), Query Frame = 1
Query: 349 ASALRRSCQRLHRDLASGAAGDCT--------------------RSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAA-AGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDIRK 1107
A AL C +L R+LAS D + +SGTT C AV+ LTVANVGDS L LL+ +P P+ + +L+ DHKP E +RI A+GG+V P P R GG+ + A A G G R L + RVW GDGPGLAMSRS+GD +AH +GVT+EPE+ + L D +LV+ SDG+WD++ E++ +
Sbjct: 297 AEALAHVCAQLQRELASAPMVDASHLPCHHLDPANLNLNPLFAAQSGTTACIAVVEDGVLTVANVGDSRAL-LLQHASTPGTPPS----------------------------------------------WTSLQLTADHKPNVDSERQRILASGGLVGPTPERAVMNCQGGAPLAGAAAAAAEG-----GARRGRLPS---------RVWMPAGDGPGLAMSRSLGDLVAHQIGVTHEPEVCQRVLS-AGDRVLVVGSDGIWDMLPNEEVTE 508
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A2R5GV65_9STRA (Protein phosphatase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV65_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 6.590e-19 Identity = 93/316 (29.43%), Postives = 126/316 (39.87%), Query Frame = 1
Query: 169 HDPSWKNQDAG-LAIAPV-GRGEGQALFAIFDGHGVNGRQASNECLERLPKYLVSAFRSGNP---ASALRRSCQRLHRDLASGAAGDCTRSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDI 1101
++P +NQD+ + PV G G+ L +FDGHG NG S RL L SA + S L + + +L D T SGTT +L G L VAN+GDS + + + V P PG RGR+ AE LS DHKP+ E RI AGG VF + D GI G RVW + D PGLAMSRS+ D + GV E+ +L P D +VLA+DG+W+ M+++++
Sbjct: 365 YNPDKQNQDSVVMQQLPVNGYCNGELLLCVFDGHGENGHHVSRRFAARLSTVLSSAPKFAQDEFTGSVLADALITIENELIQDRTIDTTLSGTTAVVTILRGSTLFVANIGDSRIAKGVYKKDKNGVYP---------------------------------QPG--------RGRIYAENLSEDHKPDLERERNRIVKAGGRVFAMKYDD------------------------GID------------GPARVWLSYADMPGLAMSRSLCDTIGKEAGVVSHAELFAHELQPGRDKFIVLATDGLWEFMTSQEV 603
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A835ZAZ3_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ3_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 3.120e-18 Identity = 61/142 (42.96%), Postives = 77/142 (54.23%), Query Frame = 1
Query: 676 GRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRAGGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRS-DVMLVLASDGVWDVMSAED 1098
G LVAE LS DHKP++ E ERI AAGG VF + D G+ G PRVW D PGLAMSRS+GDK+AH+ GV+ EPE +LDP + DV+L+LA+DG+W+ MS E+
Sbjct: 226 GALVAEPLSVDHKPDAEAERERILAAGGRVFAVEYED------------------------GLD------------GPPRVWLGHMDVPGLAMSRSLGDKVAHTAGVSSEPEFFTRELDPSAGDVLLILATDGLWEFMSNEE 331
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Match: A0A087SFG7_AUXPR (PPM-type phosphatase domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFG7_AUXPR) HSP 1 Score: 96.7 bits (239), Expect = 3.820e-18 Identity = 90/258 (34.88%), Postives = 109/258 (42.25%), Query Frame = 1
Query: 337 SGNPASALRRSCQRLHRDLASGAAG-DCTRSGTTLCAAVLNGRRLTVANVGDSGCLRLLRRTPSPDVGPAIAGKPSAASSDATAAAAGGNSLRRGMGVAENVSPGAGNRAGGSRGRLVAERLSRDHKPESVGELERIQAAGGVVFPLPRRDAAAGGGSGVIKTAFPPAGGRHQATGIREQELTTARDFGAGVPRVWRA--GGDGPGLAMSRSIGDKMAHSVGVTYEPEISEFDLDPRSDVMLVLASDGVWDVMSAEDI 1101
+G P AL +C +H L G AG D + SGTT C A+L GRRL VANVGDS + +R G AGG A RL+RD KP+ E RI AAGG V + LT D VPRV+ A G PGLAMSRS+GD AH++GV P ++ L+ R D+ LVLASDGVWDVMS D+
Sbjct: 100 AGVPGQALAAACLEVHAGLVQGDAGLDASASGTTACVALLAGRRLLVANVGDSRAVL----------------------------------VRAG--------------AGGGNAPAEALRLTRDAKPDDPEEAARIAAAGGSV-----------------------------------RRLTDDPDD---VPRVFAADPGSTTPGLAMSRSLGDAAAHTLGVCATPRLTGHVLEER-DLALVLASDGVWDVMSDADV 270 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15693.1 >prot_C-linearis_contig8.15693.1 ID=prot_C-linearis_contig8.15693.1|Name=mRNA_C-linearis_contig8.15693.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=370bp GSGSRIESGSTVVAPRYRPAASSSKNVAVRLEGRQWVSAGSKKAKVGVYSback to top mRNA from alignment at C-linearis_contig8:2628485..2630985- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15693.1 ID=mRNA_C-linearis_contig8.15693.1|Name=mRNA_C-linearis_contig8.15693.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2501bp|location=Sequence derived from alignment at C-linearis_contig8:2628485..2630985- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:2628485..2630985- >mRNA_C-linearis_contig8.15693.1 ID=mRNA_C-linearis_contig8.15693.1|Name=mRNA_C-linearis_contig8.15693.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2220bp|location=Sequence derived from alignment at C-linearis_contig8:2628485..2630985- (Chordaria linearis ClinC8C monoicous)back to top |