mRNA_C-linearis_contig8.15667.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: D8LI93_ECTSI (Similar to sodium channel, voltage-gated, type IX, alpha isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI93_ECTSI) HSP 1 Score: 484 bits (1247), Expect = 1.650e-154 Identity = 268/448 (59.82%), Postives = 322/448 (71.88%), Query Frame = 1
Query: 283 FALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXXIINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEA------------TFSWSEDE----------------CVA-------------VCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVE-GGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQSSTY 1500
FALCC S+KNPLRR CAA+VS+ F R + +LI++S++++ +D PL DPDS + AL +EL T LFV E +LKV ASGF+FMP AYLRD WNVLDF VV+ SV + G+G + XXXXXXXXXXI+ R PGLK+VLE L+ S+ GV NVAAVCF+FYIIFAIL VNYFKG+LMSCQGD FDALP +FLE+PLPWS+M++ QR WFGPLSNVSEA S S E C A VCECLGL WAETIPQQF+NVAV+LL LFEISTTE WTSVT+A VD+T MQPIRD+ ++RVW F++FM++GAYLV+NLFVGV+VDNFKKMKA+ E GGL +T++QR W KT LIMRRLRP RPQ P G+ CFRL++ WFDP VMV IVLNTVV+AM+YFGQS+ Y
Sbjct: 614 FALCCLSAKNPLRRGCAAVVSNAGFSRLVTLLIVLSSLTVALDTPLRDPDSTAAEALWALELALTFLFVLECVLKVCASGFFFMPLAYLRDAWNVLDFGVVMVSVVQLFLIRGAGLSGXXXXXXXXXXXXXXIVKRFPGLKIVLEALIGSVQGVFNVAAVCFLFYIIFAILCVNYFKGLLMSCQGDAFDALPGEVVSFLEDPLPWSEMSSGQREWFGPLSNVSEAFSGDGFSSSIGGNLSTSRVEYCDVITGGLWPDAAACCSAWPTSAEEAPTSYEVCECLGLSWAETIPQQFDNVAVSLLTLFEISTTEAWTSVTYAAVDATGVGMQPIRDHVIARVWLFILFMLLGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTEHQRLWIKTQLIMRRLRPMKRPQPPPGRLGSSCFRLINLPWFDPAVMVCIVLNTVVLAMDYFGQSNLY 1061
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE) HSP 1 Score: 477 bits (1228), Expect = 9.730e-151 Identity = 266/448 (59.38%), Postives = 319/448 (71.21%), Query Frame = 1
Query: 283 FALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXXIINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEA------------------------------------TFSW--SEDECVA---VCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVE-GGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQSSTY 1500
FALCC S+KNP RR CAA+VS+ F R + +LI++S+++L +D+PL DPDS + AL +EL T LFV E +LKV ASGFYFMP AYLRD WNVLDF VV+ SV + G+G + XXXXXXXXXXI+ R PGLKLVLE L+ S+ GV NVAAVCF+FYIIFAIL VNYFKG+LMSCQGD FDALP +FLE+PLPWS M++ QR WFGPLSNVSEA +W S +E VCECLGL WAETIPQQF+NVAV+LL LFEISTTE WTSVT+A VD++ MQPIRD+ ++RVW F++FM++GAYLV+NLFVGV+VDNFKKMKA+ E GGL +T +QR W KT LIMRRLRP R Q P D G+ CFRL++ WFD VMV IVLNTVV+AM+YFGQS+ Y
Sbjct: 1093 FALCCLSAKNPWRRGCAAVVSNAGFSRLVTLLIVLSSLTLALDSPLRDPDSTAAEALGTLELALTFLFVLEGVLKVCASGFYFMPLAYLRDAWNVLDFGVVMVSVVQLFLVRGAGLSXXXXXXXXXXXXXXXIVKRFPGLKLVLEALIGSVQGVFNVAAVCFLFYIIFAILCVNYFKGLLMSCQGDAFDALPGEVVSFLEDPLPWSDMSSGQREWFGPLSNVSEAFSGDGFSSSIGGNLSTSGVEYCDVITGGLWPDAAGCCSAWPTSAEEAPTSYEVCECLGLSWAETIPQQFDNVAVSLLTLFEISTTEAWTSVTYAAVDASGVGMQPIRDHVMARVWLFILFMLLGAYLVMNLFVGVIVDNFKKMKARAEEGGLLVTGHQRLWIKTQLIMRRLRPMKRIQPPPDRLGSLCFRLINFPWFDSAVMVCIVLNTVVLAMKYFGQSNLY 1540
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: A0A6H5JIB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB7_9PHAE) HSP 1 Score: 423 bits (1088), Expect = 2.730e-131 Identity = 234/444 (52.70%), Postives = 303/444 (68.24%), Query Frame = 1
Query: 274 DADFALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXX-IINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEA------------------TFSWSED---------------ECVAVCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEG-GLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQSSTY 1500
D AL N LR+ CAA+V + FDRFI +LI VS+++L +D+PL +P+S T++ L+ VE V T LF E LK+ A GF MP+AYLR WN+LDF+VV+ S+ Q+IT+ SG+ XXXXXXXXXX +INR PGLK+VL L +IP VLNVAAVCFMF+IIFAILGVNYFKG+LMSCQG++FDALP A F+E P W M+A+Q++WFGPLSN+S A + W + VCECLGL+W +T+PQQF+NVA ALL FEISTTE WTSV +A VD+T DMQPIRD + VWFF++FM++G+YLV+NLFVGV++DNF KMK++ EG G+ +T+ Q+SW KT + RLRP R P D G WC+++ H WFD +VM+ IVLNT+VMAM++FGQ + Y
Sbjct: 375 DPGKALFVLGPDNKLRQGCAAVVHNPGFDRFILLLISVSSLALALDSPLRNPESATAKYLKGVERVMTALFFIEMTLKICAHGFALMPKAYLRSAWNILDFVVVVISM-IQLITNDSGNLXXXXXXXXXXXXXXXXMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGILMSCQGEEFDALPESVALFIEEPTSWDAMSADQQSWFGPLSNISAAFSINGTGGFTTASACGSISAGWPDSGGCCTEWPSSASSVPTSYQVCECLGLDWDQTVPQQFDNVAQALLTFFEISTTEAWTSVMYAAVDATDVDMQPIRDNRVMIVWFFMLFMLIGSYLVMNLFVGVIIDNFNKMKSRAEGDGVLVTEEQQSWIKTQHMTHRLRPLKRVTLPGDPVGDWCYKVSHHKWFDASVMICIVLNTIVMAMQFFGQGTVY 817
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI) HSP 1 Score: 422 bits (1085), Expect = 9.480e-129 Identity = 235/445 (52.81%), Postives = 304/445 (68.31%), Query Frame = 1
Query: 274 DADFALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXX-IINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEATFS-------------------WSED---------------ECVAVCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEG-GLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQSSTY 1500
D AL N LR+ CAA+V + FDRFI +LI VS+++L +D+PL DP+S T++ L+ VE V T LF E LK+ A GF MP+AYLR WN+LDF+VV+ S+ Q++T+ SG+ XXXXXXXXXX +INR PGLK+VL L +IP VLNVAAVCFMF+IIFAILGVNYFKG+LMSCQG++FDALP A F++ P W M+A+Q++WFGPLSNVS A FS W + +CECLGL+W +T+PQQF+NVA ALL FEISTTE WTSV +A VD+T DMQPIRD + VWFF++FM++G+YLV+NLFVGV++DNF KMK++ EG G+ +T+ Q+SW KT + RLRP R P D G WC+++ H WFD +VM+ IVLNT+VMAM++FGQ + Y
Sbjct: 873 DPGKALFVLGPDNKLRQGCAAVVHNPGFDRFILLLISVSSLALALDSPLRDPESATAKYLKGVERVMTALFFIEMALKICAHGFALMPKAYLRSAWNILDFVVVVISM-IQLVTNDSGNLEXXXXXXXXXXXXXXXMINRAPGLKIVLNALFAAIPDVLNVAAVCFMFFIIFAILGVNYFKGILMSCQGEEFDALPESIALFIQEPTSWDAMSADQQSWFGPLSNVS-AAFSMNGTGGFTTASACGSINAGWPDSGGCCTEWPSSASSVPTSYQLCECLGLDWDQTVPQQFDNVAQALLTFFEISTTEAWTSVMYAAVDATDVDMQPIRDNRVMIVWFFMLFMLIGSYLVMNLFVGVIIDNFNKMKSKAEGDGVLVTEEQQSWIKTQHMTHRLRPLKRVTLPGDPVGNWCYKVSHHKWFDASVMICIVLNTIVMAMQFFGQGNVY 1315
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: A0A8K1CR88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR88_PYTOL) HSP 1 Score: 317 bits (812), Expect = 5.450e-92 Identity = 182/404 (45.05%), Postives = 254/404 (62.87%), Query Frame = 1
Query: 286 ALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXX---IINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEATFSWSEDECVAVCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEGGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQ 1488
+L FS N R +VSH WFD I LI++S+VSL +DNPL +P+S SR L+ ++ +LF+ E L K+ + G AYLR+ WNVLD I+V+ S+ I S S ++SLXXXXXXXXXX +I+R PGLKLV+ L +IP VLNV VC +F++IF+I+ VNY KG +C GD FDAL FL P+PW QMT EQ++WF S + +CEC +W +P+ F+NV +A+L FEISTTEGW V A +DSTS DMQPIRD TL +FF++FMMVG++ V+NLFVG+++DNF MKA++ G +F+T++Q+ W + R+ P + + P F +V R F+ +M+ I++NTV+MA++YFGQ
Sbjct: 1078 SLFLFSDTNRFRIVVYQVVSHPWFDNVILGLIVLSSVSLAVDNPLSNPNSTLSRFLKRMDNAFAILFLLEMLGKIISLGMIRHKGAYLRNSWNVLDCIIVITSIIMLIAESSSSGVNLKSLXXXXXXXXXXPLRMISRRPGLKLVVNALFEAIPAVLNVLFVCALFFLIFSIVAVNYLKGTFSACSGDVFDALSPEQKDFLTLPIPWLQMTTEQQSWFVNSSCAQQVQTPPGLTTSKEICECWNADWEPVLPENFDNVGMAMLTFFEISTTEGWADVMMAAMDSTSIDMQPIRDNTLIWGYFFILFMMVGSFFVVNLFVGIIIDNFNSMKAKLGGEIFLTEDQKKWIEAQKAASRVGPIRKLRRPNHHLRGLVFDIVKRRRFEWFIMICIIVNTVLMAVQYFGQ 1481
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: F0WCG7_9STRA (Similar to sodium channel putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCG7_9STRA) HSP 1 Score: 302 bits (774), Expect = 6.060e-87 Identity = 164/413 (39.71%), Postives = 237/413 (57.38%), Query Frame = 1
Query: 286 ALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAV---RSLXXXXXXXXXXIINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEATFSWSEDECVA-------VCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEGGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQSS 1494
+L F K+P RR AI++H FD + +LI VS+++L +DNPL DP S ++++L+ +E T+LF E L KVFA G + AYLR+ WNVLD I+V+ S I S S A + R L +I+R PGLKLV+ L S+P V+NV VC +FY+IF+I+ VN KG C G FD L FL P PW + EQ++WF + + TF D +CEC G W IP FNN+ A+L FE+STTEGW +V +D+T DMQPIRD+ + +FF++F +VG++ V+NLFVGV++DNF +MKA + G +T Q+ W + R+ P + P + W +V +WF+ M+ I++NT++MA +YFG++S
Sbjct: 960 SLYFFPEKHPWRRIAFAIINHPVFDNIVLLLIAVSSIALAVDNPLSDPTSSSAKSLKTLEKFCTILFTIEMLFKVFALGLFMHKDAYLRNKWNVLDGIIVVTSWVTLIAESSSQVANLKFLRPLRGLRAFRPLRMISRRPGLKLVVNALFESVPAVMNVMFVCVLFYLIFSIIAVNNLKGTFYKCTGKVFDRLNEAQLEFLTIPSPWISLKNEQKSWFDNTTCQNFTTFQPYADASDLTRITSRYICECWGASWEPPIPWNFNNIGWAMLTFFELSTTEGWVTVMTQAIDATDIDMQPIRDHQMKWAYFFVIFNLVGSFFVVNLFVGVIIDNFNRMKAALGGDFMLTPEQKKWIEAQKAALRIGPVRLVKVPKNKYRKWIHTVVRASWFEWFSMICIIINTLLMAAQYFGEAS 1372
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: A0A7S1CSS8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CSS8_9STRA) HSP 1 Score: 293 bits (750), Expect = 6.240e-86 Identity = 172/398 (43.22%), Postives = 244/398 (61.31%), Query Frame = 1
Query: 355 FDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXX---IINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLS----------NVSEATFSWS--EDECVAVCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEGGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRL-VHRTWFDPTVMVLIVLNTVVMAMEYFGQSSTY 1500
FD I +LI VS+V L +DNPL DP+S S+ L V+++ TV F E ++K+ F AYLR WN LDF++V+ SV + S +G+A++R XXXXXXXXXX +I+R PGL+LV+ L S+ ++NV VC +F++IF I+GVNYFKG ++CQGD FD L +E P+ W+ + +E +AWF NV E +S VC G +W E +PQ FNN+ A+ LFE+STTEGW + +A VD+T DMQPIRD FF+VFM+VG++ V+NLFVGVV+DNF MK ++ + +TD Q+ W KT IM +++P + + P +C+RL V+ F+ +M I+LNTV+MAM YFG+ + Y
Sbjct: 144 FDNIILVLIAVSSVLLAVDNPLNDPESTLSQFLFVMDVFMTVCFTIEMVMKIVTYQFLMGKGAYLRSGWNQLDFVIVIVSV---LSLSATGNASLRXXXXXXXXXXXXXXXVISRRPGLRLVVNALFSSMKAIMNVLFVCVLFFMIFGIVGVNYFKGRFLACQGDVFDGLETAQQQLVEAPVKWTALPSEHQAWFTGSQTYRDEFYNDDNVGEYELKYSLKRPTSKVVCAYFGADWEEVVPQNFNNIMAAMGTLFEMSTTEGWVDIMYAGVDATDLDMQPIRDIGFGWTLFFMVFMVVGSFFVMNLFVGVVIDNFNTMKERLGDNVLLTDAQKEWVKTREIMLKIKPMRKKEVPHGQVREFCYRLCVNNQPFEVVIMACIILNTVIMAMTYFGEPAEY 538
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: A0A024GD94_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GD94_9STRA) HSP 1 Score: 298 bits (762), Expect = 2.430e-85 Identity = 163/413 (39.47%), Postives = 237/413 (57.38%), Query Frame = 1
Query: 286 ALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAA---VRSLXXXXXXXXXXIINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEATFSWSEDECVA-------VCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEGGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQSS 1494
+L F+ K+P RR AI++H FD + +LI VS+V+L +DNPL DP S ++++L+ +E + T +F E L KVF+ G + AYLR+ WNVLD I+V+ S I S + A +R L +I+R PGLKLV+ L S+P V+NV VC +FY+IF+I+ VN KG C G FD L P FL P PW +++ EQ+ WF + TF D VCEC G W IP FNN+ A+L FE+STTEGW +V +D+T DMQPIRD + +FF+VF +VG++ V+NLFVGV++DNF +MKA + G +T Q+ W + R+ P + P + W +V + F+ M+ I++NT++MA +YFG+++
Sbjct: 984 SLYFFTEKHPWRRVAFAIINHPIFDNIVLLLIAVSSVALAVDNPLSDPSSSSAKSLKTLEKICTGIFTIEMLFKVFSLGLFMHKEAYLRNNWNVLDGIIVVTSWVTLIAESSTQVANFKFLRPLRGLRAFRPLRMISRRPGLKLVVNALFESVPAVMNVMFVCVLFYLIFSIIAVNNLKGTFYECTGKVFDQLSQPQLKFLTIPSPWKELSNEQKNWFENTTCHGFTTFEPYPDASDLTRITSRYVCECWGASWEPPIPWNFNNIGWAMLTFFELSTTEGWVTVMTQAIDATDIDMQPIRDNQMKWAYFFVVFNLVGSFFVVNLFVGVIIDNFNRMKAALGGDFMLTPEQKKWIEAQKAALRIGPVRAVKVPKNKYRKWIHTIVRASGFEWFSMICIIINTLLMAAQYFGEAT 1396
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: A0A5D6XXB3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXB3_9STRA) HSP 1 Score: 296 bits (759), Expect = 5.600e-85 Identity = 179/407 (43.98%), Postives = 246/407 (60.44%), Query Frame = 1
Query: 283 FALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXX---IINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLSNVSEATFSWSEDECVAVCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEGGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQSS 1494
++L FS K +R+ ++++ FD+ I LI++S+VSL IDNPL DP SK SR L+ ++ ++F E +LK+ A G +AYLR+ WNVLD I+VL+S+ I S +V+SLXXXXXXXXXX +I+R PGLKLV+ L+ SIP V NV VC +F+ IF+I+ VNY KG +C+GD FD L FL P W+ TAEQ+AWF S V AT + ++ VCECLG W + + FN+V A+L +EISTTEGW+ V A +D+T DMQPIRD +FFL FM+VG + +NLFVGV+ DNF KMKA + G +T QR W + R P + P F V T F+ +++ IV NT++MA +YFG ++
Sbjct: 845 YSLYLFSEKTWVRKVAFRVINNPVFDKAILGLIVLSSVSLAIDNPLNDPASKLSRTLKGMDNAFAIIFCVEMVLKIIALGLAVHKKAYLRESWNVLDCIIVLSSLIMLIAESSGIGGSVKSLXXXXXXXXXXPLRMISRRPGLKLVVNALIESIPAVANVLVVCALFFFIFSIMAVNYLKGTFYACKGDVFDGLDPAQVDFLVAPSSWANATAEQQAWFDQTSCVGFATSTSAKITSRYVCECLGAAWQPVMAENFNHVGTAMLTFYEISTTEGWSDVMMAAIDATDIDMQPIRDQNEVWAYFFLGFMLVGHFFAVNLFVGVITDNFNKMKAVLGGAFLLTPEQRKWIEAQKAALRCGPIRIIKPPRHPTRRLFFDAVKSTRFEWSIIFCIVANTLLMATQYFGAAT 1251
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Match: A0A2D4C0A0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0A0_PYTIN) HSP 1 Score: 294 bits (753), Expect = 3.440e-84 Identity = 170/407 (41.77%), Postives = 241/407 (59.21%), Query Frame = 1
Query: 286 ALCCFSSKNPLRRSCAAIVSHVWFDRFIAILIIVSAVSLVIDNPLLDPDSKTSRALEVVELVTTVLFVAEFLLKVFASGFYFMPRAYLRDPWNVLDFIVVLASVSYQIITSGSGSAAVRSLXXXXXXXXXX---IINRLPGLKLVLEVLLHSIPGVLNVAAVCFMFYIIFAILGVNYFKGVLMSCQGDDFDALPAPAATFLENPLPWSQMTAEQRAWFGPLS---NVSEATFSWSEDECVAVCECLGLEWAETIPQQFNNVAVALLALFEISTTEGWTSVTWATVDSTSEDMQPIRDYTLSRVWFFLVFMMVGAYLVLNLFVGVVVDNFKKMKAQVEGGLFMTDNQRSWTKTLLIMRRLRPTLRPQSPTDTAGAWCFRLVHRTWFDPTVMVLIVLNTVVMAMEYFGQ 1488
AL FS +P+RR IV H WFD I +LI +S++SL +DNPL +PD R L+ ++ V+F+ E LK+ A+G +AYLR+ WNVLD +V++S+ + S ++S XXXXXXXXXX +I+R PGLKLV+ L +IP VLNV VC +FY IF+I+ VNY KG L SCQGD F F+ P WS MT ++++WF + + AT S VCEC G W +PQ F+NV A+L FE+STTEGW V A VD+ DMQP RD V+FF+ F+++G++ V+NLFVG+++DNF +MKA + G +T+ Q+ W + R+ P + + P F +V F+ +MV I++NT++M +YFGQ
Sbjct: 817 ALFLFSELHPIRRIAHYIVCHPWFDSVILVLISISSISLALDNPLANPDGSLPRFLKRMDNAFAVIFLIEMSLKIIANGLIIHQKAYLRNGWNVLDCAIVVSSIVMLVEESSGRGKQLKSXXXXXXXXXXXPLRMISRRPGLKLVVNALFEAIPAVLNVMFVCMLFYFIFSIIAVNYLKGALYSCQGDTFGGFSDAQTAFITRPKLWSAMTDDEKSWFTNTTCTTTIQAATVVTSR----IVCECWGATWGRVLPQHFDNVISAMLTFFELSTTEGWADVMMAAVDARGIDMQPERDNNTVWVFFFVAFILIGSFFVVNLFVGIIIDNFNRMKAALGGDFMLTEEQKKWIEAQKAASRVGPIRKLRRPNHRFRGPVFDIVRHNRFEWFIMVCIIINTILMGSQYFGQ 1219 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15667.1 >prot_C-linearis_contig8.15667.1 ID=prot_C-linearis_contig8.15667.1|Name=mRNA_C-linearis_contig8.15667.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=500bp IHNTSQLELCSEEKDDADTSPVSRAQTVAAVRSSVEDGRVNDVGNKHIENback to top mRNA from alignment at C-linearis_contig8:2431687..2435093+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15667.1 ID=mRNA_C-linearis_contig8.15667.1|Name=mRNA_C-linearis_contig8.15667.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3407bp|location=Sequence derived from alignment at C-linearis_contig8:2431687..2435093+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:2431687..2435093+ >mRNA_C-linearis_contig8.15667.1 ID=mRNA_C-linearis_contig8.15667.1|Name=mRNA_C-linearis_contig8.15667.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3000bp|location=Sequence derived from alignment at C-linearis_contig8:2431687..2435093+ (Chordaria linearis ClinC8C monoicous)back to top |