mRNA_C-linearis_contig8.15644.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15644.1
Unique NamemRNA_C-linearis_contig8.15644.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: D8LUD1_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUD1_ECTSI)

HSP 1 Score: 470 bits (1209), Expect = 5.440e-159
Identity = 284/495 (57.37%), Postives = 322/495 (65.05%), Query Frame = 1
Query:  136 MATITMSSGAEWRLFPPPMKQAPPAVGNKVFVRTKSAKEVGKKGVVAKFEEVEVPACPPPG----PADLA-GEAPQEVACGCSSSD--GG--------SNXXXXXXTVWRQTXXXXXXXXT-KKWEDTRAVVRIPRGDECDHNTFDCRARPSRLVPIY-----DTSTAAGAPLLV--LLTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYVPRGDVVAFDVGADMVERTTERLKLIATSDRGKTCARVRVSKIDPFMDPRGAVEAASAPIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFANPPRLIVVKSQALVAELKTDHSGSDPAAXXXXXXXXXXXAGCTVGYQRQCGRIVEGDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKKGGRCPYEHAVCHWCLRPGHVALACEDPSDFS 1551
            MA ITMSS  EWRLFPPP+K AP +VG++VFVRTKSAKEVGKKGVV   E+VE      P     PA+L+ G    E +  C S++  GG        S+      T+WR            KK+EDTRAV+R+P       N  D RARPSRLV IY     D STAA        LLTA+T  +RLLAASQVR  D VLEVGCSTGETTA+L KYVP+G VVA DVGADMVERT ERLKL+  S   + CA V V K+DPF+DPRGAVEAA    E    G   DG  D ++   GGG  VDAVFIDIGGNREVRGV RMIAFARTAFA PPRLIVVKSQ LV ELK   +    A            +    G   +CGRI EGD WFRELLARST+A PS      GG     G  S G      PKHFHPNKAPLRLSPKDGVTPICRY+NYH+EGCKKGGRCP++HAVCHWCLRPGH+AL+CE+ + F+
Sbjct:    1 MAAITMSSAEEWRLFPPPLKPAPLSVGDEVFVRTKSAKEVGKKGVVCAIEKVEATPVVAPAATSEPAELSRGYHDPEGSNNCYSAEPPGGVAGAHSRTSSCDFAGTTIWRNVDRQEKNPKKGKKFEDTRAVIRLPPRAGSPGNPPDYRARPSRLVRIYRSPPADRSTAAXXXXXXXXLLTADTASFRLLAASQVRACDAVLEVGCSTGETTAILAKYVPKGRVVALDVGADMVERTKERLKLV--SSESEICADVAVHKMDPFLDPRGAVEAAEHETE---AGIGKDG-GDASRPTKGGG--VDAVFIDIGGNREVRGVVRMIAFARTAFAQPPRLIVVKSQELVDELKASSNAVGNAGDDGATTPAATVS--EAGSYAECGRISEGDLWFRELLARSTSARPSFNENTEGGG----GDASSGCSNRTTPKHFHPNKAPLRLSPKDGVTPICRYYNYHKEGCKKGGRCPFDHAVCHWCLRPGHIALSCENANGFN 481          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: A0A7S2LZT0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LZT0_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.170e-41
Identity = 153/519 (29.48%), Postives = 208/519 (40.08%), Query Frame = 1
Query:  166 EWRLFP------PPMKQAPPAVGNKVFVRTKSAKEVGKKGVVAKFEEVEVPACPPPGPADLAGEAPQEVACGCSSSDGGSNXXXXXXTVWRQTXXXXXXXXTKKWEDTRAVVRIPRGDECDHNTF---DC--------RARPSRLVPIYD-----TSTAAGAPLLVLLTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKY-----------------VPRGDVVAFDVGADMVERTTERLK--------LIATSDRGKTCARVRVSKIDPFMDPRGAVEAASAPIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFANP-PRLIVVKSQALVAELKTDHSGSDPAAXXXXXXXXXXXAGCTVGYQRQCGRIVEGDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKK----------------GGRCPYEHAVCHWCLRPGHVALAC 1530
            +WR++P         ++  P +   V VR KSAKE+G  G +                                     +        V+  T         K  ED R  ++      C H+T    DC          RPSRLVP+YD           A  LVLLT +T  YR LA S +RP D VLE+GCSTGE TA+L++                  V  G++V FD GA ++++   RL+         +AT D   +   +++ ++D   DP+GA   A++     G                        V IDIGGNR++  V RMI + +TAF +  PRLI+VKS+AL  EL T    S                  +V      G I  G +WF  L + S  A   +    S   L  R              + HP K PL LSPK G+ PICRYHNYH +GC K                  +C Y+H  CHWC   GH+A+ C
Sbjct:   11 QWRVYPLLGGFNNAQRKFEPKISGAVHVRPKSAKEIGYTGRITSI----------------------------------NTKAKSTTHVYSATELHVSQKKRKLTEDMRVTIQ----QHCYHHTEKYEDCITCHSTKHDVRPSRLVPVYDLHLKNNKIDKDAESLVLLTPDTTTYRQLATSHLRPNDYVLEIGCSTGECTALLLRRNLLLQSQNLRQIEQHNNVVLGNIVGFDTGAKILKQADNRLRREYNQSATTLATDDDAYSKL-IQLHRVDALADPKGAYALATSNNTCPG-----------------------MVLIDIGGNRQLESVVRMIQWVQTAFKDERPRLILVKSEALENELSTALRSSHTDDNNDS----------SVPSVTDEGTITNGQNWFNSLESPSIVADKEAGKCLSRQQLLSR--------------YSHPKKVPLVLSPK-GI-PICRYHNYHPDGCTKFIKSKSTGTVADEDEDDLQCQYDHEYCHWCQDAGHIAVNC 441          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: B8BWX1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWX1_THAPS)

HSP 1 Score: 155 bits (392), Expect = 3.140e-38
Identity = 115/356 (32.30%), Postives = 161/356 (45.22%), Query Frame = 1
Query:  610 ETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYV----------------------------PRGDVVAFDVGADMVERTTERLKL-----------IATSDRGKTCARVRVSKIDPFMDPRGAVEAASAPIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFANPP-RLIVVKSQALVAELKTDHSGSDPAAXXXXXXXXXXXAGCTVGYQRQCGRIVEGDSWFRELLAR---STAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKK------GGRCPYEHAVCHWCLRPGHVALAC 1530
            +T  YR LA S +R  D VLE+GCSTGE TA++++ +                            P+G VV FD G DM+++T +RL             +  +        + + K+D F DP+GA   A              G ++T+          D + IDIGGNRE++GV  MI + +TAF   P R+I+VKS++LV +L+  H+  D                 T     + G +  G  W   L +     T    +S    S G L               PK+ HP KAPL LSPKD  TPICR+HNY + GCK+        +CP++H  CHWC   GHVAL+C
Sbjct:  140 DTTNYRQLATSHLRHGDSVLEIGCSTGECTALILRRLVLFHLHEMRQXXXXXXXXXXPNDEVVTTPKGRVVGFDTGGDMIQQTQQRLHAELEHLLPKDTSVQLNASEAYSQLINLHKVDAFADPKGAHSMAV-------------GSSNTSP---------DVILIDIGGNRELKGVVNMIHWVQTAFMQQPARVIIVKSESLVEKLE-QHTVKDKGNAILNIN--------TKPQVLKDGVVENGQEWLTLLHSSYKADTLLLTASAENTSSGQLP--------------PKYSHPLKAPLVLSPKDDQTPICRFHNYGKHGCKRISNNNENEKCPFDHEHCHWCRNVGHVALSC 450          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: A0A7S3V7C4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7C4_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.510e-37
Identity = 134/481 (27.86%), Postives = 208/481 (43.24%), Query Frame = 1
Query:  163 AEWRLFPPPMKQAPPAVGNKVFVRTKSAKEVGKKGVVAKFEEVEVPACPPPGPADLAGEAPQEVACGCSSSDGGSNXXXXXXTVWRQTXXXXXXXXTKKWEDTRAVVRIPRGDECDHNTFDCRARPSRLVPIYDTSTAAGAPLLVLLTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYVPRGDVVAFDVGADMVERTTERLK-------LIATSDRGKTCAR------VRVSKIDPFMDPRGAVEAASAPIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFANPPRLIVVKSQALVAEL-----KTDHSGS----DPAAXXXXXXXXXXXAGCTVGYQRQCGRIVEGDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVT--PICRYHNYHREGCKKGGRCPYEHAVCHWCLRPGHVALACE 1533
            ++W ++PPP   +    G  V++R+KS K++G++G   K  + E          +    A +      S S   +           +         T      + VV    G+  +   +    RP+ ++PIY T T       ++LT  T  YR LAASQ+   D VLE+GCS GE +  + KY+ +G  + FD+   M+    ++          +   ++ +   +      V+   IDPF DP+ A + A+       +    DG     +I          +FIDIGGNRE+  VARMI++A+  F   PRL ++KS+A++  L     K   SG       +            +   V  ++  G +V G+ WF  ++       P+      G                 AP   HP KAPL LSP   +T  PICR+HNY  +GCKK   CP++H  CH C +PGH AL C+
Sbjct:    3 SDWIVYPPPDPLSHVNNGA-VYIRSKSKKDMGRRGHFVKLLDEE----------ETTESAKKTATAKQSESKRWTRTRTRLVVNVLKEKNNRNVADTSNCASKKEVV---DGNSHEQAFYTATFRPASIIPIYGTRTRNK----IILTECTDQYRKLAASQLLENDHVLEIGCSNGECSLYIDKYLQKGTFIGFDISQKMIAEAKDKFSGRDGIPTKLEWDEKAELWRQYGDDNYVKFFTIDPFTDPQRAYKYATTI-----DSRNEDGNIKGVEI------KPTVIFIDIGGNRELDPVARMISWAKENFN--PRLCIIKSEAMMQNLNECQEKYRQSGGLGEGKESKLKRQKLDKEQKSRANVAVKKN-GVVVNGEDWFENIVKN-----PNDVSDTVGVRCNP----------CTAPGFIHPLKAPLSLSP---ITNQPICRFHNYAEKGCKKKDACPFDHIHCHLCKKPGHRALDCK 433          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: A0A7S4KYP7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KYP7_9EUKA)

HSP 1 Score: 135 bits (340), Expect = 5.860e-34
Identity = 75/175 (42.86%), Postives = 94/175 (53.71%), Query Frame = 1
Query:  985 FIDIGGNREVRGVARMIAFARTAFANPPRLIVVKSQALVAELKTDHSGSDPAAXXXXXXXXXXXAGCTVGYQRQCGRIVE-GDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKKGGRCPYEHAVCHWCLR 1506
            FIDIGGNRE+ GV RMI F RTAF  PPRLI+VKS+A++AELK  H                       G    C  ++E GDSWF+ELLA+    +P   G P+               + R P++F P +A +R  P     PICR+HNYH  GC K   CPY H +CHWCL+
Sbjct:   25 FIDIGGNRELDGVTRMIRFVRTAFTPPPRLIIVKSKAMIAELKKTH-----------------------GSMASCLDVIENGDSWFQELLAKE--GSPHGEGKPT---------------EKRLPRYFRPLEAAMRKDP--AGVPICRFHNYHPSGCLKSANCPYNHNICHWCLK 157          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: A0A1Z5J8X0_FISSO (C3H1-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8X0_FISSO)

HSP 1 Score: 136 bits (342), Expect = 9.820e-33
Identity = 113/344 (32.85%), Postives = 154/344 (44.77%), Query Frame = 1
Query:  541 SRLVPIYDTSTAAGAP---------LLVLLTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYVPRGDVVAFDVGADMVERTTERLKLIATSDRGKTCARVRVSKIDPFMDPRGAVEAASA--PIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFANPPRLIVVKSQALVAELKT---DHSGSDPAAXXXXXXXXXXXAGCTVGYQRQCGRIVEGDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKKGGRCPYEHAVCHWCLRPGHVALAC 1530
            +R++PI  +S+++            L V++TAET  YR LA SQV   D VLE+GCSTGET+ VL K       V FD  A+M ERT  +     TS   + C      K++  ++P  A +      P+                           AV++DIGGNRE+ GVARM+ +  TA     +LIVVKS+ L  EL +   D  G                             I++ D    E L +                L+ R          R P+H  P +AP   SP D   PICRYHNYH++GC+KG  CP++H  CH CL  GHVA++C
Sbjct:   31 NRMIPILSSSSSSKTENHHEKDNDTLSVIITAETKYYRQLATSQVCSPDTVLEIGCSTGETSKVLWKRA--SSWVGFDTSAEMTERTMSK----NTSSCRRLC-----QKMNALLEPALAYQTVHQHQPV-------------------------TTAVWMDIGGNREMNGVARMLHWILTAPFPALQLIVVKSKELARELSSIPVDSKG-----------------------------ILQMDGM--EFLNKKR--------------LDSR----------RLPRH--PQQAPKVYSPIDPSLPICRYHNYHKKGCRKGSDCPFDHVHCHMCLEAGHVAMSC 281          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: A0A1Z5K7X1_FISSO (C3H1-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7X1_FISSO)

HSP 1 Score: 132 bits (331), Expect = 1.030e-30
Identity = 107/333 (32.13%), Postives = 147/333 (44.14%), Query Frame = 1
Query:  541 SRLVPIYD---TSTAAGAPLLVLLTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYVPRGDVVAFDVGADMVERTTERLKLIATSDRGKTCARVRVSKIDPFMDPRGAVEAASAPIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFANPPRLIVVKSQALVAELKTDHSGSDPAAXXXXXXXXXXXAGCTVGYQRQCGRIVEGDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKKGGRCPYEHAVCHWCLRPGHVALAC 1530
            +R++PI     T      PL +++TA T  YR LAASQ+ P D VLE+GCSTGET+ ++  +      + +D  A+M ERT         S    +C RV   K++   +P  A +                 Q   A           AV++DIGGNR++ GVARM+ +  T+     RLIVVKS+ LV EL +    S+                           I++ D    E L +                              R P+H  P +AP   SP D   PICRYHNYH++GC KG  CP++H  CH CL  GHVA+ C
Sbjct:   86 NRMIPILSFPKTENHEKDPLSIIITAATKHYRQLAASQLCPQDAVLEIGCSTGETSEII--WNRASSWIGWDTSAEMTERTM--------SKHSSSCHRV-CQKMNALSEPALAYQTVH--------------QHQPATT---------AVWMDIGGNRDMNGVARMLHWILTSPFPALRLIVVKSEELVRELSSVPVNSEG--------------------------ILQMDGM--EFLNQKRLEFC------------------------RLPRH--PQQAPKVYSPTDPSLPICRYHNYHKKGCGKGSDCPFDHVHCHMCLEAGHVAMNC 330          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: A0A7S2E4J6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E4J6_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.980e-25
Identity = 74/233 (31.76%), Postives = 107/233 (45.92%), Query Frame = 1
Query:  976 DAVFIDIGGNREVRGVARMIAFARTAFANPPRLIVVKSQALVAELKTDHSGSDPAAXXXXXXXXXXXA-------------------------GCTVGYQRQ--------C------------GRIVEGDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKK---GGRCPYEHAVCHWCLRPGHVALAC 1530
            + +FIDIGGNR +  V +MI + +  F+  PR+IVVKS+ LV E+    +G +              A                         GCT   Q+Q        C            G+I +G+ WF++L+         +T   S  + +   R +    + + P + HP KAP+  SP D   PICRYHNYH++GCK+      CP +H  CHWCL+PGH+AL C
Sbjct:   20 NCIFIDIGGNRALHSVVQMITWVQNEFS--PRIIVVKSEELVEEIVGKDNGEEERYLKKKMKRMKVKAKNKDTVPDQFQQEAKKRKVNDESIHGCTKEQQQQHDHCKTETCKKTMKNVHVLKNGQIQKGNEWFKKLV-HQCMEEHDNTNHDSSTTTKTDERSTSINTQQQQPYYIHPLKAPITYSPTDASKPICRYHNYHKDGCKRYKTDESCPLDHTFCHWCLQPGHIALDC 249          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: B7G665_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G665_PHATC)

HSP 1 Score: 116 bits (291), Expect = 6.090e-25
Identity = 103/341 (30.21%), Postives = 139/341 (40.76%), Query Frame = 1
Query:  541 SRLVPIYDTSTAAGAPLLVLLTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYVPRGDVVAFDVGADMVERTTERLKLIATSDRGKTCARVRVSKIDPFMDPRGAVEAASAPIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFAN----------PPRLIVVKSQALVAELKTDHSGSDPAAXXXXXXXXXXXAGCTVGYQRQCGRIVEGDSWFRELLARS-TAAAPSSTGPPSGGSLEERGRESQGTGKHRAPKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKKGGRCPYEHAVCHWCLRPGHVALAC 1530
            S+L+P+    TA+   LLV +  +T  +R  A +   PTDRVLE+GCSTG+T+    K       V  D  +DMV+RT   L+   T+  G   A  RV   D  + P  A                   + +  + G         VF+DIGGNR + GV  M+ +  T              P RL++VKSQAL   L   H+ ++                  +  Q  C R      WF + L ++ TA  P                              HP +A L  SP     PICRYHNY    C+K   CP +H  CH C RPGH+AL C
Sbjct:   96 SKLLPL----TASFGSLLVRVVPDTASFRHWAVAWSGPTDRVLEIGCSTGQTSRAFWK-ARVSSWVGMDTSSDMVQRTRIALQQQDTAT-GSARANYRVCHCDALLHPNQA-------------------ELEARQFGP-----PTLVFVDIGGNRNLSGVVLMLDWVLTRSVGVEKRSSGERQPTRLVLVKSQALARALSLFHTDNNRTLPESPNE--------NLASQEFCRR------WFEDQLRQAQTATLPR-----------------------------HPLQASLVYSPISATQPICRYHNY--STCQKVETCPLDHRHCHLCQRPGHIALRC 361          
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Match: K0RTZ8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RTZ8_THAOC)

HSP 1 Score: 116 bits (290), Expect = 6.110e-25
Identity = 85/246 (34.55%), Postives = 124/246 (50.41%), Query Frame = 1
Query:  454 KKWEDTRAVVR---IPRGDECDHNTFDCRA----RPSRLVPIYDTSTAAGAPLLVLLTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYVPR-----------------GDVVAFDVGADMVERTTERL--KLIATSDRGKTCARVRVSKIDPFMDPRGAVEAASAPIEPDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFARTAFAN-PPRLIVVKSQALVAEL 1110
            K  EDTR  +R      GD  D   + CR+    RPSRL P++D +    +   V+LT +T+ YRLLAAS VR  DRVLE+GCSTGE TA++++ +                   G V+AFD   +++++   R+  +  + +  G+    V++   D  MD +G                          + + GG   D V +DIGGNRE+ GV RMI + + +F   PPRLI+VKS+ALV  L
Sbjct:   96 KATEDTRVSIRPHCFLSGD-FDAEKY-CRSKEDVRPSRLFPVFDAAGDGKSSTTVVLTPDTVSYRLLAASHVRVADRVLEIGCSTGECTALVLRRLVLLHQQRMRIEASQDLQFLGGVIAFDTSNEIIDKARRRIGDEYGSLAKTGRVEDIVKLYNCDALMDTKGRA----------------------ISLASDGGRYPDVVLVDIGGNRELHGVVRMINWVKVSFQRRPPRLIIVKSEALVESL 317          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LUD1_ECTSI5.440e-15957.37C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2LZT0_9STRA2.170e-4129.48Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8BWX1_THAPS3.140e-3832.30Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S3V7C4_9STRA1.510e-3727.86Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4KYP7_9EUKA5.860e-3442.86Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A1Z5J8X0_FISSO9.820e-3332.85C3H1-type domain-containing protein n=1 Tax=Fistul... [more]
A0A1Z5K7X1_FISSO1.030e-3032.13C3H1-type domain-containing protein n=1 Tax=Fistul... [more]
A0A7S2E4J6_9STRA1.980e-2531.76Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7G665_PHATC6.090e-2530.21Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
K0RTZ8_THAOC6.110e-2534.55Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2194141..2196171 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score476.5
Seed ortholog evalue1.6e-131
Seed eggNOG ortholog2880.D8LUD1
Hectar predicted targeting categoryother localisation
EggNOG OGs2E3GK@1,2SAJ2@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-14_004520.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1565
Cds size1563
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930543.0151184-CDS-C-linearis_contig8:2194140..21955911622930543.0151184-CDS-C-linearis_contig8:2194140..2195591Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2194141..2195591 -
1690881123.6192453-CDS-C-linearis_contig8:2194140..21955911690881123.6192453-CDS-C-linearis_contig8:2194140..2195591Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2194141..2195591 -
1622930543.0366182-CDS-C-linearis_contig8:2196059..21961711622930543.0366182-CDS-C-linearis_contig8:2196059..2196171Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2196060..2196171 -
1690881123.631052-CDS-C-linearis_contig8:2196059..21961711690881123.631052-CDS-C-linearis_contig8:2196059..2196171Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2196060..2196171 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15644.1prot_C-linearis_contig8.15644.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 2194141..2196171 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15644.1

>prot_C-linearis_contig8.15644.1 ID=prot_C-linearis_contig8.15644.1|Name=mRNA_C-linearis_contig8.15644.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=521bp
SLCLSPDPQQQGGLEAGLPSWLCRPTVMEGAQMENQPGRAVGQEQMATIT
MSSGAEWRLFPPPMKQAPPAVGNKVFVRTKSAKEVGKKGVVAKFEEVEVP
ACPPPGPADLAGEAPQEVACGCSSSDGGSNGDGGTTTVWRQTKKQKKRKK
TKKWEDTRAVVRIPRGDECDHNTFDCRARPSRLVPIYDTSTAAGAPLLVL
LTAETLPYRLLAASQVRPTDRVLEVGCSTGETTAVLVKYVPRGDVVAFDV
GADMVERTTERLKLIATSDRGKTCARVRVSKIDPFMDPRGAVEAASAPIE
PDGEGERADGQADTAKIGAGGGCTVDAVFIDIGGNREVRGVARMIAFART
AFANPPRLIVVKSQALVAELKTDHSGSDPAAAAAAAAAAAAAAGCTVGYQ
RQCGRIVEGDSWFRELLARSTAAAPSSTGPPSGGSLEERGRESQGTGKHR
APKHFHPNKAPLRLSPKDGVTPICRYHNYHREGCKKGGRCPYEHAVCHWC
LRPGHVALACEDPSDFSALG*
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mRNA from alignment at C-linearis_contig8:2194141..2196171-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15644.1 ID=mRNA_C-linearis_contig8.15644.1|Name=mRNA_C-linearis_contig8.15644.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2031bp|location=Sequence derived from alignment at C-linearis_contig8:2194141..2196171- (Chordaria linearis ClinC8C monoicous)
TCTCTCTGTCTCTCTCCCGACCCCCAACAGCAGGGAGGTTTGGAAGCAGG GCTACCTAGTTGGTTGTGCCGGCCAACTGTCATGGAAGGCGCGCAGATGG AGAACCAACCAGGCAAGTAAATGGTGTTTGTCGAGCTTTCCGATTCTCCA TCAACAACGTTTCGCACTGAACGCCCGTTTGAATTGACACAGCTAACACG GCCAGGATTCTCTGCCGTCGGTGGTATTAAGGTGAATCAACACTAGTTGG TACCGCCCAAAACCCTTGCTCGCGTTCCTCGCGGTTCCGGGCTGCCTCGC TCCACAATCATGGCGACAGCTCGCCGGAGAGCCAATAGTACCGGCTTGTC TCTTTCCTCAGAGCCTCAGCATGTTTGTTTTGGCCAGGAGACGTATGTTG CAGCAGTAGTCTAGCAGTGATAAACGCCAGTCTTGATGCGTATGTATCAT GTTTCGTTACATTACTCCAGGCCCGCTACACCATTAGAGGTTAAATAGGC TTAGGCTTGGCTTGATGCAGCTCAGTGGATTTTTGTGTTGCTAACCACGT GCACATCAAAACCCAATGCATGTTCCGCAGGGCGAGCAGTAGGCCAAGAA CAGATGGCCACCATAACCATGAGCAGTGGCGCAGAGTGGAGGCTGTTTCC CCCGCCCATGAAGCAGGCCCCGCCAGCTGTCGGCAACAAGGTTTTTGTGA GGACAAAATCGGCCAAAGAGGTCGGGAAAAAGGGGGTCGTTGCCAAGTTC GAGGAGGTAGAGGTCCCGGCCTGCCCCCCCCCGGGACCAGCCGATTTGGC TGGGGAGGCCCCACAAGAGGTCGCCTGCGGCTGCAGCAGTAGCGATGGCG GTAGCAATGGCGACGGTGGTACGACCACCGTCTGGAGACAGACCAAGAAG CAGAAGAAGAGAAAAAAAACGAAGAAGTGGGAGGACACGAGGGCGGTGGT TCGAATACCGCGCGGAGACGAATGCGACCATAACACGTTCGACTGCCGCG CCCGGCCCTCGAGGTTGGTGCCAATCTACGACACGTCCACTGCGGCTGGC GCCCCGCTCCTCGTTCTACTCACGGCGGAGACGCTCCCTTACCGCCTCCT CGCCGCTTCGCAAGTCCGCCCGACCGACAGAGTGCTGGAGGTAGGCTGCT CGACGGGGGAGACGACCGCCGTCCTGGTCAAGTACGTGCCCCGGGGGGAC GTGGTGGCCTTTGACGTCGGGGCTGACATGGTCGAACGCACGACGGAGAG ACTCAAGCTAATAGCAACGTCGGATCGCGGTAAGACTTGCGCCAGGGTTC GGGTTAGCAAAATTGATCCTTTTATGGATCCGCGAGGTGCGGTCGAGGCC GCGTCGGCACCCATCGAGCCGGACGGGGAGGGTGAGCGGGCGGACGGGCA GGCGGATACCGCGAAAATCGGTGCTGGCGGGGGTTGCACGGTGGATGCCG TGTTCATCGACATTGGAGGTAACCGTGAAGTTCGGGGCGTCGCGCGGATG ATCGCTTTCGCCCGGACCGCGTTCGCAAACCCTCCGAGGCTGATCGTCGT CAAGAGCCAAGCGTTGGTCGCGGAGCTGAAGACAGACCACAGCGGTTCCG ACCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGT TGCACGGTAGGGTACCAAAGACAGTGCGGAAGAATAGTGGAGGGGGACTC GTGGTTTCGCGAGCTGCTTGCGCGAAGCACGGCGGCGGCGCCGTCGTCGA CGGGTCCGCCTAGCGGCGGAAGTTTGGAGGAACGAGGGAGAGAGTCGCAA GGCACCGGCAAGCATCGCGCACCGAAGCACTTCCACCCCAACAAGGCCCC GCTGCGCCTGTCTCCCAAGGACGGCGTCACGCCGATCTGCCGGTACCACA ACTATCACCGGGAGGGGTGCAAGAAGGGCGGGCGGTGCCCGTACGAGCAC GCGGTATGCCACTGGTGCCTTCGGCCGGGCCACGTGGCGTTGGCTTGCGA GGACCCTAGTGATTTCAGCGCACTGGGATGA
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Coding sequence (CDS) from alignment at C-linearis_contig8:2194141..2196171-

>mRNA_C-linearis_contig8.15644.1 ID=mRNA_C-linearis_contig8.15644.1|Name=mRNA_C-linearis_contig8.15644.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3126bp|location=Sequence derived from alignment at C-linearis_contig8:2194141..2196171- (Chordaria linearis ClinC8C monoicous)
TCTCTCTGTCTCTCTCCCGACCCCCAACAGCAGGGAGGTTTGGAAGCAGG
GCTACCTAGTTGGTTGTGCCGGCCAACTGTCATGGAAGGCGCGCAGATGG
AGAACCAACCAGTCTCTCTGTCTCTCTCCCGACCCCCAACAGCAGGGAGG
TTTGGAAGCAGGGCTACCTAGTTGGTTGTGCCGGCCAACTGTCATGGAAG
GCGCGCAGATGGAGAACCAACCAGGGCGAGCAGTAGGCCAAGAACAGATG
GCCACCATAACCATGAGCAGTGGCGCAGAGTGGAGGCTGTTTCCCCCGCC
CATGAAGCAGGCCCCGCCAGCTGTCGGCAACAAGGTTTTTGTGAGGACAA
AATCGGCCAAAGAGGTCGGGAAAAAGGGGGTCGTTGCCAAGTTCGAGGAG
GTAGAGGTCCCGGCCTGCCCCCCCCCGGGACCAGCCGATTTGGCTGGGGA
GGCCCCACAAGAGGTCGCCTGCGGCTGCAGCAGTAGCGATGGCGGTAGCA
ATGGCGACGGTGGTACGACCACCGTCTGGAGACAGACCAAGAAGCAGAAG
AAGAGAAAAAAAACGAAGAAGTGGGAGGACACGAGGGCGGTGGTTCGAAT
ACCGCGCGGAGACGAATGCGACCATAACACGTTCGACTGCCGCGCCCGGC
CCTCGAGGTTGGTGCCAATCTACGACACGTCCACTGCGGCTGGCGCCCCG
CTCCTCGTTCTACTCACGGCGGAGACGCTCCCTTACCGCCTCCTCGCCGC
TTCGCAAGTCCGCCCGACCGACAGAGTGCTGGAGGTAGGCTGCTCGACGG
GGGAGACGACCGCCGTCCTGGTCAAGTACGTGCCCCGGGGGGACGTGGTG
GCCTTTGACGTCGGGGCTGACATGGTCGAACGCACGACGGAGAGACTCAA
GCTAATAGCAACGTCGGATCGCGGTAAGACTTGCGCCAGGGTTCGGGTTA
GCAAAATTGATCCTTTTATGGATCCGCGAGGTGCGGTCGAGGCCGCGTCG
GCACCCATCGAGCCGGACGGGGAGGGTGAGCGGGCGGACGGGCAGGCGGA
TACCGCGAAAATCGGTGCTGGCGGGGGTTGCACGGTGGATGCCGTGTTCA
TCGACATTGGAGGTAACCGTGAAGTTCGGGGCGTCGCGCGGATGATCGCT
TTCGCCCGGACCGCGTTCGCAAACCCTCCGAGGCTGATCGTCGTCAAGAG
CCAAGCGTTGGTCGCGGAGCTGAAGACAGACCACAGCGGTTCCGACCCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTTGCACG
GTAGGGTACCAAAGACAGTGCGGAAGAATAGTGGAGGGGGACTCGTGGTT
TCGCGAGCTGCTTGCGCGAAGCACGGCGGCGGCGCCGTCGTCGACGGGTC
CGCCTAGCGGCGGAAGTTTGGAGGAACGAGGGAGAGAGTCGCAAGGCACC
GGCAAGCATCGCGCACCGAAGCACTTCCACCCCAACAAGGCCCCGCTGCG
CCTGTCTCCCAAGGACGGCGTCACGCCGATCTGCCGGTACCACAACTATC
ACCGGGAGGGGTGCAAGAAGGGCGGGCGGTGCCCGTACGAGCACGCGGTA
TGCCACTGGTGCCTTCGGCCGGGCCACGTGGCGTTGGCTTGCGAGGACCC
TAGTGATTTCAGCGCACTGGGATGAGGCGAGCAGTAGGCCAAGAACAGAT
GGCCACCATAACCATGAGCAGTGGCGCAGAGTGGAGGCTGTTTCCCCCGC
CCATGAAGCAGGCCCCGCCAGCTGTCGGCAACAAGGTTTTTGTGAGGACA
AAATCGGCCAAAGAGGTCGGGAAAAAGGGGGTCGTTGCCAAGTTCGAGGA
GGTAGAGGTCCCGGCCTGCCCCCCCCCGGGACCAGCCGATTTGGCTGGGG
AGGCCCCACAAGAGGTCGCCTGCGGCTGCAGCAGTAGCGATGGCGGTAGC
AATGGCGACGGTGGTACGACCACCGTCTGGAGACAGACCAAGAAGCAGAA
GAAGAGAAAAAAAACGAAGAAGTGGGAGGACACGAGGGCGGTGGTTCGAA
TACCGCGCGGAGACGAATGCGACCATAACACGTTCGACTGCCGCGCCCGG
CCCTCGAGGTTGGTGCCAATCTACGACACGTCCACTGCGGCTGGCGCCCC
GCTCCTCGTTCTACTCACGGCGGAGACGCTCCCTTACCGCCTCCTCGCCG
CTTCGCAAGTCCGCCCGACCGACAGAGTGCTGGAGGTAGGCTGCTCGACG
GGGGAGACGACCGCCGTCCTGGTCAAGTACGTGCCCCGGGGGGACGTGGT
GGCCTTTGACGTCGGGGCTGACATGGTCGAACGCACGACGGAGAGACTCA
AGCTAATAGCAACGTCGGATCGCGGTAAGACTTGCGCCAGGGTTCGGGTT
AGCAAAATTGATCCTTTTATGGATCCGCGAGGTGCGGTCGAGGCCGCGTC
GGCACCCATCGAGCCGGACGGGGAGGGTGAGCGGGCGGACGGGCAGGCGG
ATACCGCGAAAATCGGTGCTGGCGGGGGTTGCACGGTGGATGCCGTGTTC
ATCGACATTGGAGGTAACCGTGAAGTTCGGGGCGTCGCGCGGATGATCGC
TTTCGCCCGGACCGCGTTCGCAAACCCTCCGAGGCTGATCGTCGTCAAGA
GCCAAGCGTTGGTCGCGGAGCTGAAGACAGACCACAGCGGTTCCGACCCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTTGCAC
GGTAGGGTACCAAAGACAGTGCGGAAGAATAGTGGAGGGGGACTCGTGGT
TTCGCGAGCTGCTTGCGCGAAGCACGGCGGCGGCGCCGTCGTCGACGGGT
CCGCCTAGCGGCGGAAGTTTGGAGGAACGAGGGAGAGAGTCGCAAGGCAC
CGGCAAGCATCGCGCACCGAAGCACTTCCACCCCAACAAGGCCCCGCTGC
GCCTGTCTCCCAAGGACGGCGTCACGCCGATCTGCCGGTACCACAACTAT
CACCGGGAGGGGTGCAAGAAGGGCGGGCGGTGCCCGTACGAGCACGCGGT
ATGCCACTGGTGCCTTCGGCCGGGCCACGTGGCGTTGGCTTGCGAGGACC
CTAGTGATTTCAGCGCACTGGGATGA
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