mRNA_C-linearis_contig8.15636.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15636.1
Unique NamemRNA_C-linearis_contig8.15636.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig8.15636.1 vs. uniprot
Match: D8LUC2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC2_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 9.070e-137
Identity = 202/213 (94.84%), Postives = 209/213 (98.12%), Query Frame = 1 
Query:    1 MKFTAASVIVGLTSAQAFMVQPTMKTSGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSNGDAALYKSGDQAFMTKVKIEVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVFARQKNGPACTKAYNDAQEHLTKYLSLI 639
            MKFTAASV+VGLT++QAFMVQPTMKT+GPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGAD ELGGGMSNYFAESDTYSPYSPYS GD ALYKS DQAFMTKVKI++LKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTV+ARQKNGPACTKAYNDAQEHLTKYLSLI
Sbjct:    1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADPELGGGMSNYFAESDTYSPYSPYSKGDDALYKSSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213
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BLAST of mRNA_C-linearis_contig8.15636.1 vs. uniprot
Match: A0A6H5KN94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN94_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 7.380e-90
Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MKFTAASVIVGLTSAQAFMVQPTMKTSGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSNGDAALYKSGDQAFMTKVKIEVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 453
            MKFTAASV+VGLT++QAFMVQPTMKT+GPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYS GD ALYK+ DQAFMTKVKI++LKDSQKRLQTVPGFIEGKKWEEIRSLLTAK
Sbjct:    1 MKFTAASVLVGLTTSQAFMVQPTMKTAGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSKGDEALYKTSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAK 151
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BLAST of mRNA_C-linearis_contig8.15636.1 vs. uniprot
Match: A0A835ZLX1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLX1_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.830e-38
Identity = 99/215 (46.05%), Postives = 129/215 (60.00%), Query Frame = 1 
Query:    1 MKFTAASVIVGLTSAQAFMVQPTMKTSGPDGGSSRADFAKLVTGTVAATAAVAAPALAKAGTGAKQNWFGVIG-ADQELGGGMSNYFAESDTYSPYSPYS-NGDAALYKSGDQAFMTKVKIEVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVFARQKNGPACTKAYNDAQEHLTKYLSLI 639
            M   A  ++  L   QAF+  P+M  +    G SRADFAK++   VA TAA   PALA  G   KQN FGVIG A    GGGMS+ ++E+DTYSPYSPYS   D     +G    M+K  I+V+KD + R + +PG++ G KW EIR+ LT KAYSLR AMN LAA  P+A   AK +Y D+E +   AR K+G   + AY  +   L+ YLS +
Sbjct:    1 MAIKAVVLLAVLAVCQAFV--PSMTANS---GLSRADFAKVLAAGVAGTAA---PALAL-GASPKQNLFGVIGTAPMVGGGGMSSPYSEADTYSPYSPYSATEDGTAVYTGVTDEMSKRYIDVIKDCKNRFEKIPGWVAGSKWMEIRAELTRKAYSLRGAMNALAAS-PEAKAAAKDYYADLEVMMTEARNKDGAKISAAYAKSVSDLSTYLSKL 205
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BLAST of mRNA_C-linearis_contig8.15636.1 vs. uniprot
Match: K0SUU3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUU3_THAOC)

HSP 1 Score: 79.3 bits (194), Expect = 2.890e-14
Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 1 
Query:  136 VAATAAVAAPALAKAGTGAKQNW--FGVIGADQELGGGMSNYFAESDT-YSPYSPYSN-GDAALYKSGDQAFMTKVKIEVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVFARQKNGPACTKAYNDAQEHLTKYLSLI 639
            +AA AAV APA A A  G    +  FGVIG       G +    +S   YSPYS Y N G +    S + A   + K   + +SQKRL  +P ++E K+W  ++  LT   Y  R A+  LA + P+   +AK F++ IE+ ++ A  KN   C  A  D+ + L ++++ +
Sbjct:   43 IAAAAAVIAPAAANAAAGESPRFSVFGVIGDGTSYSEGAAYGSDQSSAVYSPYSVYGNVGSSDALYSANNAGEVERKKGFIAESQKRLSKLPAYVERKEWFNVKDELTRYMYETRGAVRGLA-ETPEQKKIAKSFFQAIEEASLQATLKNQDKCAAASADSAKLLDQFVASL 213
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BLAST of mRNA_C-linearis_contig8.15636.1 vs. uniprot
Match: D5KXJ1_GALSU (Photosystem II extrinsic protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=D5KXJ1_GALSU)

HSP 1 Score: 53.9 bits (128), Expect = 4.610e-5
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 1 
Query:  166 ALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSNGDAALYKSGDQAFMTKVKIEVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAAD------KPQAAGVAKVFYRDIEQLTVFARQKNGPACTKAYNDAQEHLTKYLS 633
            A AK+G  AK + FGV G        +S+ F  +D  S   P       LYK+ ++  +++   + + D +  L  +PG+I  K WE+I+SL+  +   LR A   + A       + +A  +   F + IE +   ARQKNG    +A   A + L ++ S
Sbjct:   78 ASAKSGESAKLSIFGVEG--------LSSPFT-ADLKSKGQP-------LYKNLNEEEISRYT-KAITDGKASLSKIPGYINEKSWEDIKSLVRQRVADLRSAQKKMMASISEQRIRQKAEKLYDSFIKSIEDIDYAARQKNGDKVRQAQQQAMKLLQEWAS 222
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BLAST of mRNA_C-linearis_contig8.15636.1 vs. uniprot
Match: D6PTH0_GALSU (Photosystem II Q n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=D6PTH0_GALSU)

HSP 1 Score: 53.9 bits (128), Expect = 4.650e-5
Identity = 47/162 (29.01%), Postives = 77/162 (47.53%), Query Frame = 1 
Query:  166 ALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSNGDAALYKSGDQAFMTKVKIEVLKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAAD------KPQAAGVAKVFYRDIEQLTVFARQKNGPACTKAYNDAQEHLTKYLS 633
            A AK+G  AK + FGV G        +S+ F  +D  S   P       LYK+ ++  +++   + + D +  L  +PG+I  K WE+I+SL+  +   LR A   + A       + +A  +   F + IE +   ARQKNG    +A   A + L ++ S
Sbjct:   79 ASAKSGESAKLSIFGVEG--------LSSPFT-ADLKSKGQP-------LYKNLNEEEISRYT-KAITDGKASLSKIPGYINEKSWEDIKSLVRQRVADLRSAQKKMMASISEQRIRQKAEKLYDSFIKSIEDIDYAARQKNGDKVRQAQQQAMKLLQEWAS 223
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LUC2_ECTSI9.070e-13794.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN94_9PHAE7.380e-9093.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZLX1_9STRA1.830e-3846.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0SUU3_THAOC2.890e-1433.72Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
D5KXJ1_GALSU4.610e-529.01Photosystem II extrinsic protein n=1 Tax=Galdieria... [more]
D6PTH0_GALSU4.650e-529.01Photosystem II Q n=1 Tax=Galdieria sulphuraria Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2130616..2135859 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.7
Seed ortholog evalue6.7e-108
Seed eggNOG ortholog2880.D8LUC2
KEGG koko:K08901
KEGG Pathwayko00195,ko01100,map00195,map01100
Hectar predicted targeting categorychloroplast
EggNOG OGs2E8QV@1,2SF67@2759
Ec32 ortholog descriptionPsbQ-like domain
Ec32 orthologEc-14_004430.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Exons3
Model size761
Cds size642
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15636.1prot_C-linearis_contig8.15636.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 2130616..2135740 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930541.4841204-CDS-C-linearis_contig8:2130615..21307011622930541.4841204-CDS-C-linearis_contig8:2130615..2130701Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2130616..2130701 +
1690881122.805164-CDS-C-linearis_contig8:2130615..21307011690881122.805164-CDS-C-linearis_contig8:2130615..2130701Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2130616..2130701 +
1622930541.4996815-CDS-C-linearis_contig8:2131408..21317751622930541.4996815-CDS-C-linearis_contig8:2131408..2131775Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2131409..2131775 +
1690881122.8173501-CDS-C-linearis_contig8:2131408..21317751690881122.8173501-CDS-C-linearis_contig8:2131408..2131775Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2131409..2131775 +
1622930541.5184336-CDS-C-linearis_contig8:2135551..21357401622930541.5184336-CDS-C-linearis_contig8:2135551..2135740Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2135552..2135740 +
1690881122.8302333-CDS-C-linearis_contig8:2135551..21357401690881122.8302333-CDS-C-linearis_contig8:2135551..2135740Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2135552..2135740 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930541.535168-UTR-C-linearis_contig8:2135740..21358591622930541.535168-UTR-C-linearis_contig8:2135740..2135859Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2135741..2135859 +
1690881122.8398552-UTR-C-linearis_contig8:2135740..21358591690881122.8398552-UTR-C-linearis_contig8:2135740..2135859Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2135741..2135859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15636.1

>prot_C-linearis_contig8.15636.1 ID=prot_C-linearis_contig8.15636.1|Name=mRNA_C-linearis_contig8.15636.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=214bp
MKFTAASVIVGLTSAQAFMVQPTMKTSGPDGGSSRADFAKLVTGTVAATA
AVAAPALAKAGTGAKQNWFGVIGADQELGGGMSNYFAESDTYSPYSPYSN
GDAALYKSGDQAFMTKVKIEVLKDSQKRLQTVPGFIEGKKWEEIRSLLTA
KAYSLRDAMNTLAADKPQAAGVAKVFYRDIEQLTVFARQKNGPACTKAYN
DAQEHLTKYLSLI*
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mRNA from alignment at C-linearis_contig8:2130616..2135859+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15636.1 ID=mRNA_C-linearis_contig8.15636.1|Name=mRNA_C-linearis_contig8.15636.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5244bp|location=Sequence derived from alignment at C-linearis_contig8:2130616..2135859+ (Chordaria linearis ClinC8C monoicous)
ATGAAGTTCACCGCCGCTTCGGTTATTGTGGGGCTCACCTCGGCCCAGGC
TTTCATGGTGCAGCCCACGATGAAGACTTCCGGACCGTGAGTCTTGCCCC
CAATCATGTAAAAAGTTCACGAAAAAGTTGCTAGTTCCTCCTTGAGGCAC
TCCGCTTCCGTGCGTTCCCGTGCTGGTTGCTGGAGGCGGGGGGCTGGTTC
GGGGTCGGCTCACCTGTGGGTTATTGTCTACTTTTCTTCCTTGTCGGATG
CTTTGCGCTTGCCCCGTGCGTGGTTTTATCTCGCATGACAATCGAAGCAA
TCTGTGTGGAAGACAGGGGGCCCAGGCTGTTTTTTTGCCTCTATTTTCAA
GTAGTTTTCAACTGCGTCACTCAAAGACGTTTGTTGGTTGCAGGAGAGGG
CGGGAGAACGACGCGGGAGCCGGGGGCGTGCTTTGCCTCGTTGTCGAAAA
ACCAAGCCAGGACTTTCTTCCGTGCCTTAGGTCTGCGAGTGCCGCGGCAG
CGTCCCACGAAAGAGTATTTTCCTCGGCCTTAAACTTACACAGCCTTTCA
TCAGGCACAAACGGGCGTACAGAATCAGCGCTTTTCATATCAACGTCGTC
TCTTCATGCGCAGCTACCCTGTAGACCCGACAGAAAAACCCAAACCCTTC
CCAAGCAAGAGATCCACGTGACACCCACGCAAAACTCTACCATTTTCCTC
GCTTACCACACGCACGCACACTTCCAACTAACCCCCCCCCATTACCCATC
ACGCCCGTCATCCGTTTCGTGTCTGATTTTCCCCCCCGTGCAGCGACGGC
GGCAGCAGCCGCGCTGACTTCGCGAAGCTGGTGACAGGAACCGTGGCGGC
GACCGCCGCCGTAGCAGCGCCGGCATTGGCCAAGGCCGGGACGGGGGCAA
AGCAGAACTGGTTCGGCGTGATCGGCGCGGACCAGGAGCTCGGGGGAGGT
ATGTCGAACTACTTTGCCGAGTCGGACACGTACTCCCCGTACTCGCCCTA
CTCCAACGGAGACGCCGCCCTCTACAAGAGCGGCGACCAGGCTTTCATGA
CGAAGGTCAAGATCGAAGTCCTCAAGGACTCCCAGAAGCGGCTGCAGACC
GTGCCCGGCTTCATCGAGGGCAAGAAGTGGGAGGAGATCCGCTCTCTGCT
CACCGCCAAGGTGTGTGTGTGTGTGTTGTTGTTGTTGTTGTCTTCACATT
AAAAACCATCCCGGTCCCGTCTCTATCCAGTACCTCCTTCTGTCTCAACC
TCTCCGTACTAATCCATCACTTGACGCGGCCAATTTCCGTGGTCACAAGC
TAACTTACCTCAAAAGGTATACTGAAAAAAAAAACGGACCCCAAGGGCCA
GCAGAGCAATAAAATACGAGAAAAATAAAAGAATCAGGAAACAATTAGTC
TGGAGCCCTCCGCTCCCCTCTACACGCTATGTGCGGCAAAAATAAAAATA
AAACAATAGTGGAGCGCCAGCATCACCAACCAGGGGTATAACCTCCCGAT
TCTATCTTGCTACCCCTACGAAGCCGGGGTGTTCCGTCCCAGTTCCCCCG
GCAAGGCAAATACATAGTCGGATCCATCTTCACCGACTAAGGTGCATATA
CATATATATATATGTTACAAGGGAAGCAGACAAGGAGACATGTCGACAAA
AATAAAACATCCAACACGCAGAGGGACAGTCACACCCGGAATAAAAATCT
AAACACGACATCATTCCCCGGGGGGGTAGTGTAATGGTGCAGCGAAAAAA
GGGGGGGAGAGGGGAAAATAAAAGGAAAAAATAGCCACTAGGTTCAATCC
GTCACATATCGCGCCACCCGGTCGGTCTCTTCTCGCTTGCTTTCTTCCCT
CGCCGTTTCTTTCCGCCCCCCTCCCGTCCCGTTGGTTGGCGCCGTGTCTA
AACTATTTCTGGGCCCGTCGTCTCCTCGCTCGGTGGCGCTTTGTCGGCTC
GCCTCCTCCTCGTCCTTGTGCCAAGAGGTCATAAACCTCTCAGCTCCCTG
TAGCACCCCCGCGTGCCACGGTACTCCCCCTTTCACCTTCGCCGCCTCCG
CCCAAATTAATTTCGGGACTCCGAAGACACACGGTTCGTCGGCCGTGGAG
CCGTGCGTGGCCCCGAACGCCTTCAAATCGTCCTTGAGGCATATCAGCCA
GCTCTGCTCCGGGCTTCCCCTGCCCAGTTCCTCCCCTCCCACCACCTCGC
CGAACATCAGTCGCTTCGGGAGTCGCCCGTCCGGCTGCCTTGCTACGGCC
CCCGCAAAGAGCAGCCGCCGCTGACGGATAGTGGCTTCCACGCTCTGGCA
GCCGACCTGCTTCAGCGCCTGGGCGTGTATGACAGCTGCCGGTGGGTACC
CCGCTTGCGTCGGTATCCGATGACTCGCAGGAGCCGCCGGTGGTGTGTCG
TCTGCAGCAGCCGGTAGTGCTCGCGACGCGGTGACCACGACATGCAACCG
TACAGTAGCGCGCCTCCATTGCCTCCGCCTTGAGTAGGCGAGTCTTGAGC
CGGAACGGTGCTCCCGGCCTGTCGAAGAGCTCCCGGGCATATCTCCTGAA
GCACGCCCAGGCTATTTTGCTCCTGTAGTTGATCTCTCGGGTGAAGTCGC
CGTGTTCGTTGACGAAGCCACCCAAGTACCGGAACTCGGTCGTCTGCGCG
TACCCCTGCCCCGCTGCTTCGATGATCAGCGGCGGCGGCGGCGGTGGTGG
TGGTGGTGGCTGCTTCTCCTTCACGCGCATCAGGAGGGTCTCCGTCTTCT
TCTCCGATACCGTCAGCCCGAACTCCCGGAGTACCTCCACGATAACGGTC
ATCATCCTCGCCAGTCCGTCGGCTGATTTCGACACCACTCCGGCATCGCC
GGCGTACAGCATCGCCGATACCGCCCGCCGCACTTGATCCAGCGCTGTCC
CCACCCCCGCTCCCGGCCTCCTCCTTCAAGTGCACCAGGTTCTCCATAAT
GACCTCATCCTCGCTGAATCGCACGGCAATGATCTCGATGGGCGCGGCGA
AGAACACGTTGAAAAGCAGTGGGGACATTGTACACTCTTGGCGCAGGCCC
TGCGTGACCGAAAACCAGTCCGATAGCTCAAGCGTGTATTACAGTGTGTA
GTGTGTAGGTGTGCTTGTGGGTACTTTGCAAGGGATTCGCTGTGTTGTTG
GCTCCGGATCACGTGCATTCCCCTTTTGGTTTTCCACGCTCACTCCCCTC
ATCACCACACTCCCCCCGACTTGAAGATACACGCACGAACGCACACGAGC
GTGGAAATAACTGAATCAGCAGGTACTGGAGCACGCGTGAGCATAGTCGA
CCTGTTTTTTTCTTGCGTCGTGTGTGATGCCGCCGTAAAGGCAGCGGTGA
ATTCGTGAGGTTGAGTTCCATGCGGAGGGCACTGCTGTACGCACCTACTT
CGTATAAACATACGCTGTCTGTTTGCCTTGTCTTCGCATACATATGTACA
TACGTGTAAAGGATTTAGGTGCTGGAAAAGCCCAACCGTCGTTGTATGCA
TTACTTCGCTAACCCGGTGGGTCGACGGGTTTTAAGCGTGGCCACCATGA
CGCGGCTGGCGGCCTGTCGGCTCCGTCATCCGAAAGAACTCCTCCGCCGT
TGACCCTCCACCGGGAGAGAGGGTTGGGGTAGGCACGTTTCAGCCAACAG
CTAGCTTTTTGTGTCTCAAATATTCGTACGGAAACGAGGATAGATCGAGA
TTCGCCTACAGCTGCTGCCACCGCGCGTGGACAAGCCCATAAAACCCCTC
TACATATCGTCATCATACAACTGCTGTTGCCTCGATTCGGGTGTTTTTCT
GGGTGGGGCGAGGGGCGAGACGTTCCTCACTCTAAAAAAGTTGACCAGTG
GTCCCGAGTCGTCTTCGGTTCGCCACCCCCTTCTTCTCTGGTTGTAGACG
CGTTCGGTGCGGCAACTTCCAACTTGATGTCGATCGCAGGCGCCATGTAC
AGCAGTGCTTGGCACAGCAATAGTTGCCAGGGTTTCAAAACCCAAGAATG
GGAAAACGCGGAGGGGGGCTCGGAACGCCGTTCGTGAAATTCAAAGGCAA
AAGCACACGGGCTCCTCGGAAAATATTAGTAAAGCGGGCGGCAGTAAGGC
AAACAGCAGCAGTTTCCACCGTAAGTTCAGACTGAGGTGATGTTTTCGTG
TCTTTTTGTTGAGACGCCCCCCCAGTTTCTCGAAAAGGTTGCAGTTTTTG
TTGTGAGGCTCCTTTCTTGGGTGCTTCCAAAACCTTGCAGAGGGTCAGCC
AGTGGTTGTTGTTGTTTGTGCATCCCTCGATATTTCTTGGTGTGTCCCTC
TGAATAGACGAGACTCATCTACTTGACAGTGTAGCGCGGGGTTACACAGC
TGTACCCGCGCGCCGTAAGTTTCTCCGAAACAAGTGTAAGTCAAAAGCGG
GGAGGGAAAAGGCGCGCCGAGCTGGACATATTCATTTGTCAAACCAGTAT
CGCGCAAACCAATCGAGAATTGGGGGGAAAGAAGAGTTGCGCCGGTGGTT
CCATGACATTTTCTCCTTTTATTTGACAAGGAAACTCAGTACCACAGCGG
TTTTCTACGAAGTCACTCGAAAACGAAATTCGTTGGTCGGCGGCAAGACT
AACTTTCCGCCAAGTTTTTGTGCAAAACTAGAGCTCCCATACCCCCTGCG
AGTAAAATTGTGGTGGCCATCGGTTGGCGCAATGGCACCACTACAGCAGT
ACCACTTGATCAAAAACCCGTTCCGGCGGTCTGGACTTCATTCGGGAAGA
AATGCTTGCATCGCAACAAGTGCCGAAACACAGCCGAAGTTCAGCCCTGC
GCGATAGATATGTTCTCCGAGTGTTGTTCTCGAAGCTGGCAATTTGTGTC
GTTTACCTGAAGGTGGGAGCCGCCAGCAAATTGCTCATGTTTCATTTCGT
TCGTTCGCTGCGTAAATTACGGTTTTGACTCAACAGGCTTACAGCCTGAG
GGATGCCATGAACACCCTGGCGGCCGACAAGCCGCAGGCGGCAGGCGTAG
CCAAGGTTTTCTACAGGGACATCGAGCAGCTCACCGTGTTCGCGCGCCAA
AAGAACGGCCCAGCGTGCACCAAGGCGTACAACGACGCGCAGGAGCACCT
CACCAAGTACCTGTCCCTTATCTAATCTTCCGAGACGAGACGCGACTGAT
GGGGTTTCGGGTTGGTCAAGCCGCAACGAACGGCCATACCCTTGGCCCAT
GTGGACTTTTGATCGACGAGCACTCTTCTCCTGACGGTAGACTC
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Coding sequence (CDS) from alignment at C-linearis_contig8:2130616..2135859+

>mRNA_C-linearis_contig8.15636.1 ID=mRNA_C-linearis_contig8.15636.1|Name=mRNA_C-linearis_contig8.15636.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at C-linearis_contig8:2130616..2135859+ (Chordaria linearis ClinC8C monoicous)
ATGAAGTTCACCGCCGCTTCGGTTATTGTGGGGCTCACCTCGGCCCAGGC
TTTCATGGTGCAGCCCACGATGAAGACTTCCGGACCATGAAGTTCACCGC
CGCTTCGGTTATTGTGGGGCTCACCTCGGCCCAGGCTTTCATGGTGCAGC
CCACGATGAAGACTTCCGGACCCGACGGCGGCAGCAGCCGCGCTGACTTC
GCGAAGCTGGTGACAGGAACCGTGGCGGCGACCGCCGCCGTAGCAGCGCC
GGCATTGGCCAAGGCCGGGACGGGGGCAAAGCAGAACTGGTTCGGCGTGA
TCGGCGCGGACCAGGAGCTCGGGGGAGGTATGTCGAACTACTTTGCCGAG
TCGGACACGTACTCCCCGTACTCGCCCTACTCCAACGGAGACGCCGCCCT
CTACAAGAGCGGCGACCAGGCTTTCATGACGAAGGTCAAGATCGAAGTCC
TCAAGGACTCCCAGAAGCGGCTGCAGACCGTGCCCGGCTTCATCGAGGGC
AAGAAGTGGGAGGAGATCCGCTCTCTGCTCACCGCCAAGCGACGGCGGCA
GCAGCCGCGCTGACTTCGCGAAGCTGGTGACAGGAACCGTGGCGGCGACC
GCCGCCGTAGCAGCGCCGGCATTGGCCAAGGCCGGGACGGGGGCAAAGCA
GAACTGGTTCGGCGTGATCGGCGCGGACCAGGAGCTCGGGGGAGGTATGT
CGAACTACTTTGCCGAGTCGGACACGTACTCCCCGTACTCGCCCTACTCC
AACGGAGACGCCGCCCTCTACAAGAGCGGCGACCAGGCTTTCATGACGAA
GGTCAAGATCGAAGTCCTCAAGGACTCCCAGAAGCGGCTGCAGACCGTGC
CCGGCTTCATCGAGGGCAAGAAGTGGGAGGAGATCCGCTCTCTGCTCACC
GCCAAGGCTTACAGCCTGAGGGATGCCATGAACACCCTGGCGGCCGACAA
GCCGCAGGCGGCAGGCGTAGCCAAGGTTTTCTACAGGGACATCGAGCAGC
TCACCGTGTTCGCGCGCCAAAAGAACGGCCCAGCGTGCACCAAGGCGTAC
AACGACGCGCAGGAGCACCTCACCAAGTACCTGTCCCTTATCTAAGCTTA
CAGCCTGAGGGATGCCATGAACACCCTGGCGGCCGACAAGCCGCAGGCGG
CAGGCGTAGCCAAGGTTTTCTACAGGGACATCGAGCAGCTCACCGTGTTC
GCGCGCCAAAAGAACGGCCCAGCGTGCACCAAGGCGTACAACGACGCGCA
GGAGCACCTCACCAAGTACCTGTCCCTTATCTAA
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