mRNA_C-linearis_contig8.15634.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15634.1
Unique NamemRNA_C-linearis_contig8.15634.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: D8LUC0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC0_ECTSI)

HSP 1 Score: 451 bits (1160), Expect = 7.180e-154
Identity = 259/398 (65.08%), Postives = 303/398 (76.13%), Query Frame = 1
Query:  214 LTTATSRLGDLPLDDEFRTDPIFNYEETA---PLVAVWSDGKVSMAGLLSMQWARQELHLTMLEYFGLAMLVGYAVVYIVGRRRNYRIAREFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPAAKALSEHA-SLLELLHVTDQNAEPILGQEETPRKALRFAFRLPEGD------KVGPTKMMALALDYIDILTNLRMSAATKKKALDKREAVQKRKSKLTHLQRQERYQQLKNERLQREREEYENLTPEQKRRRDLKEEKKARKSARGK-HKVR 1374
            +TTAT   GD+ LDDEFRT+P F+ E      P  AVWSDGKVS+AGL SMQWA+QELHLT +EY G A+L+GY  VYI GRRRNY IA  FI GVH GLF S FLEAGPASE+PP DRRQLLA DSC+TFLYYATGSRRC GV V I+LA+RHDLFM+LW  F+PA     DRVTVEVAF ++DIEPVIFAVA K+++KK+L++VPHLQDY  A  T+ PS LLP  LVCLS+SSAL +P+L            +LLEL++VTDQN +PILGQE TP+K LR+ FRLP G         G T+MM LAL YI +L   +MSA TKKKAL++R AV KRKS +TH QRQER+Q LKNERLQREREEYE LTPEQKRRRDL++EKKA+K A  K HK+R
Sbjct:    1 MTTATFVSGDMSLDDEFRTNPFFSPETAGAGHPSTAVWSDGKVSLAGLFSMQWAKQELHLTAVEYLGFALLLGYVAVYIAGRRRNYHIAHGFIMGVH-GLFCSRFLEAGPASEMPPVDRRQLLARDSCSTFLYYATGSRRCLGVQVTIDLASRHDLFMVLWSFFSPAM---GDRVTVEVAFDDEDIEPVIFAVARKREVKKLLQEVPHLQDY--AGVTRAPS-LLPPSLVCLSESSALLEPMLPXXXXXXXXXXXNLLELMYVTDQNDQPILGQEHTPKKVLRYTFRLPVGSARGGDGSDGATEMMELALSYIQLLNKFKMSAGTKKKALERRAAVLKRKSAITHAQRQERFQMLKNERLQREREEYEGLTPEQKRRRDLRDEKKAKKVASSKRHKMR 391          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: A0A7S1GAA4_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAA4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.030e-21
Identity = 101/338 (29.88%), Postives = 149/338 (44.08%), Query Frame = 1
Query:  394 EYFGLAMLVGYAVVYIVGRRRNYRIAREFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKK----------DLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQP-AAKALSEHASLLELLHVTDQNAEPILGQEETPRKALRFAFRLPEGDKVGPTK-MMALALDYIDILTNLRMSAATKKKALDKREAVQKRKSKLTHLQRQERYQQLKNERLQREREEYENLTPEQKRRRDLKEEKKARKSARGKHKV 1371
            E FG+A++V YA+ ++VGR  N +IA  +     + LF   F   G        D    L   S N + +YA+G R C G+L  ++L  RHDLF LL  +  P      D V V++     D++  +FA    +          DL    + VPH         ++ P  +    ++       L   LL P   K L E   L   +H TDQ    + G     R ALRF F LP    +   +  M +A+ Y+D++  LR+S   ++KA + RE  +  + K T  +R+           +  RE Y  +TPEQ+ R D  E KKA     GK KV
Sbjct:  139 EGFGVAVIVVYALNFVVGRSANQKIAAAWEDAFCESLFSKQFARIGLG------DSTSYLQKQSQNQWRFYASGRRYCVGLLATLQLRKRHDLFSLLAEIAWPDK----DEVVVDIPMNPADMDTFVFAAVRSRFRKTFHSESTDLANCAKLVPHAS-LPDRIRSETPDDI---DVLIEEHCRELMGDLLPPKVCKVLHEQHKLFHAMHFTDQAPMSVEGTGRLSRSALRFKFNLPAAASMEDLRPFMEMAVFYVDLVKQLRLSKVARRKAEELREKARIERFKATREEREXXXXXXXXXXXRARREAYAKMTPEQQARADKLEAKKAASKGGGKGKV 462          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: UPI0009017240 (uncharacterized protein At5g49945-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI0009017240)

HSP 1 Score: 92.8 bits (229), Expect = 2.810e-17
Identity = 71/270 (26.30%), Postives = 132/270 (48.89%), Query Frame = 1
Query:  379 HLTMLEYFGLAMLVGYAVVYIVGRRRNYRIAREFITG--VHDGLFFSHF--LEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPAA-------KALSEHASLLELLHVTDQNAEPILGQEETPRKALRFAFRLPEGDKVGPT-KMMALALDYIDILTNLRMSA 1152
            H   +E   L++LVGYA+ Y  G+R N  +A  + +   V D +   +F  L  G   + P      L+  ++ N F +YA+G R C G+L  +EL +RH+L + L+    P      D ++ EV   ++ ++ ++FA+A KK +K + +++ +LQ +       G    +   L  +S+S  +A  ++           K+  +       +H +DQ+     G+    RK L F F LP+ + +  T +++AL   YID++   ++S+
Sbjct:   22 HWYTVEIVCLSILVGYAINYFTGKRENENLALAWASKFCVKDSILEKNFSLLGVGEGEDSP------LMLKEAANVFKFYASGRRYCHGLLATMELKSRHNLILRLFNSVVPCK----DEISFEVYMNDEAMDHIVFAMARKKAVKTMHKELRNLQRFRGVVPIPGGRKWVSEELAVMSESKEVARDMVTDLVLDKVFGDKSFEKFGKYFISMHFSDQHP----GKH---RKMLLFKFALPDAEYMDDTVRLVALIPYYIDLVGRYKLSS 274          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: A0A251RY58_HELAN (Uncharacterized protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RY58_HELAN)

HSP 1 Score: 90.1 bits (222), Expect = 1.030e-15
Identity = 78/283 (27.56%), Postives = 127/283 (44.88%), Query Frame = 1
Query:  394 EYFGLAMLVGYAVVYIVGRRRNYRIA----REFITGVHDGLFFSHF--LEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPAA-----------------------KALSEHASLLELLHVTDQNAEPILGQEETPRKALRFAFRLPEGDKVGP-TKMMALALDYIDILTNLRMSA 1152
            E   + +LV Y V Y +G+  N  +A     +F T     +F  +F  L  G   + P      LL  +  N F +YA+G R C GVL  +EL +RHDL   ++ +  P      D +T EV   +D ++ V+FA+A KK +K +L++V  LQ + +  A  G    +   L  +++S  +A  L+  A                        KA  +   L   +H +DQ+         + R+ L F F LP  D +   T+++AL   YID +   ++S+
Sbjct:  149 EIICVLILVLYGVNYFIGKNENETLALAWAEKFATPA--SIFDKNFSLLGVGEGEDSP------LLLKEGQNVFKFYASGRRFCQGVLGTMELKSRHDLMAKVYNMVVPCK----DEMTFEVYMNDDAMDHVVFALAKKKVVKGMLKEVRDLQRFGSLMAVPGNRKWVADELSVVTESKEVAGDLITEAVLDQLLFDDILDFLTRLVIMVFGEKAFEKFGKLFISMHFSDQH-------NSSHRRVLIFKFALPAADHMADITRLVALIPYYIDFIGRYKLSS 412          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: F4PWV6_CAVFA (DUF1682 family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PWV6_CAVFA)

HSP 1 Score: 87.0 bits (214), Expect = 6.680e-15
Identity = 74/259 (28.57%), Postives = 118/259 (45.56%), Query Frame = 1
Query:  415 LVGYAVVYIVGRRRNYRIAREFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPA-AKALSEHASLLELLHVTDQNAEPILGQEETPRKALRFAFRLPE-GDKVGPTKMMALALDYIDILTNLRMSAATKKKALDKRE 1185
            + GY V Y +G++ N  +   +       LF  +F   G +++        ++  D  NT+ +  +G   C G  V I L  R DLF  L  L   AS    DR+ ++VA  + + + VIFA+   K LKK   D   L  + +    +G    L      + D+  L    L+P     L+ +  L E LH+TD ++           K L F FRLP+  D     +++A+A+D+ID++ N  +  A+K KA   RE
Sbjct:   98 IAGYVVNYFIGKKTNQALVSLWGQKARS-LFVRNFSFLGDSNQFT------IIKVDP-NTYNFTCSGRVNCYGAQVSINLKKRQDLFTQLMDL---ASFAEPDRIKIDVALTKGECDTVIFAITKAKALKKFKADNNDLHLFASKIDNQG---ALSSAYAVMGDTDCLPSVFLKPEFVNILNSNERLFESLHLTDHSSI----NPTKFNKTLSFVFRLPKISDMDKLMELIAMAIDFIDVVANCELPKASKAKAEKLRE 338          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: A0A812X2A9_SYMMI (Ccdc47 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X2A9_SYMMI)

HSP 1 Score: 85.1 bits (209), Expect = 1.380e-14
Identity = 70/261 (26.82%), Postives = 120/261 (45.98%), Query Frame = 1
Query:  394 EYFGLAMLVGYAVVYIVGRRRNYRIAREFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPAAKALSEHASLLELLHVTDQNAEPILGQEETPRKALRFAFRLPEGDKVGPTKM---MALALDYIDILTNLRMSAATKKK 1167
            E   LAM+  + + Y+ GR  N +IA  +I   +   F  +F     AS   P D   LL  ++   + ++A+G   C+G+ + I L  RHD+ M +    +  +    D+VT+++    +     + AV  K   +         Q+++   +T   SS +   +V      A+       A K L +   ++EL+ V+D NAEP+ G    P K L F FRL   D   P KM   + LA+  +D +  +++S ++K K
Sbjct:   63 ELICLAMIFVWILCYLYGRMANEKIAVNWIN-TYKSYFDENFAFMSSASTAKP-DPNALLHRETLADYSFFASGRVNCAGMYLEINLLKRHDVVMRV---IDALAFPFHDKVTIQIPLNPNVDSIFLLAVCRKGKQEAFRSQRKEFQEFSPQVSTSLFSSAM---IVMCEAPDAIQQLFDSQAMKCLGDLEDMIELICVSDLNAEPVEGFNVIPAKLLTFTFRLL--DPSNPEKMRPLVELAVRLVDTIHQMKLSGSSKGK 313          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: A0A7S2ZAK7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAK7_9RHOD)

HSP 1 Score: 80.5 bits (197), Expect = 6.260e-13
Identity = 81/275 (29.45%), Postives = 133/275 (48.36%), Query Frame = 1
Query:  340 AGLLSMQWARQELH-LTMLEYFGLAMLVGYAVVYIVGRRRNYRIA----REFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPAA--KALSEHASLLELLHVTDQN-AEPILGQEETPRKALRFAFRLPEGDKVGPTKMMALALDYIDILTNL 1140
            AG     WA  + H +T +E+F   + V Y VV +VG  RN  I     R FI+ +      S F + G   E P       +  D  +    YATG +    + V  EL +R D+F +      P    + DR  V V F    +EP+IF+V  +KD+KKI R+   L+ YT + A    ++ +P GL  L+++S +  P L PA+  K ++E+   +  +H+TD+  A+P+  +E++    + F F +P   +     +   +L Y D + +L
Sbjct:   11 AGGAQGSWATLDPHSVTQVEHFLAGVCVVYVVVGLVGFFRNRSIMKSMERSFISEME-----SQFDQVGLKPEKPG------MFMDGLSLCYLYATGRKGLKFIKVAAELRHRQDMFSVFG---EPVFGSSGDRAKVVVPFS-GKVEPLIFSVVRRKDVKKIRRENLDLEIYTHS-APWPTTAPVPKGLDILTENSDIV-PALLPASFQKLIAENEKYIVSIHLTDRGIADPVASKEKS---LVVFDFYIPSDSEKVKELIYQFSLSYADRIASL 265          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: A0A6T6MV56_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MV56_9RHOD)

HSP 1 Score: 65.1 bits (157), Expect = 4.250e-8
Identity = 66/242 (27.27%), Postives = 118/242 (48.76%), Query Frame = 1
Query:  424 YAVVYIVGRRRNYRIA----REFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPAA--KALSEHASLLELLHVTDQN-AEPILGQEETPRKALRFAFRLPEGDKVGPTKMMALALDYIDI 1128
            Y V+ +VG  RN  I     R FI+ +      S F + G +S       ++ +  D  +   +YATG +    + +  EL  R D+F ++     P    + DR  V + F    +EP+IF+V  +KD+KKI  +   L+ YT + A    ++ +P  L  L++SS +  P L PA+  K ++E+   +  +H+TD+  A+P+  QE+     + F F +P   +     +  +  +++DI
Sbjct:    1 YVVLGLVGFFRNRSIMKSMERSFISEME-----SQFDQVGTSSS------KKGMFLDGLSLCYFYATGRKGLKFLKIAAELRRRQDMFSVIG---EPVFGSSGDRARVVIPFS-GKVEPLIFSVVRRKDVKKIRNENIDLEIYTHS-APWPTTAPVPKALDILTESSDVV-PALLPASLQKLIAENEKYIVSIHLTDRGIADPLASQEKC---LVAFDFFIPSDSEKVKELVYQVFDEFLDI 222          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: A0A7S0BLD8_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BLD8_9RHOD)

HSP 1 Score: 62.8 bits (151), Expect = 9.800e-8
Identity = 61/209 (29.19%), Postives = 105/209 (50.24%), Query Frame = 1
Query:  424 YAVVYIVGRRRNYRIA----REFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCLSDSSALADPLLQPAA--KALSEHASLLELLHVTDQN-AEPILGQEE 1029
            Y V+ +VG  RN  I     R FI+ +      S F + G +S       ++ +  D  +   +YATG +    + +  EL  R D+F ++     P    + DR  V + F    +EP+IF+V  +KD+KKI  +   L+ YT + A    ++ +P  L  L++SS +  P L PA+  K ++E+   +  +H+TD+  A+P+  QE+
Sbjct:    1 YVVLGLVGFFRNRSIMKSMERSFISEME-----SQFDQVGTSSS------KKGMFLDGLSLCYFYATGRKGLKFLKIAAELRRRQDMFSVIG---EPVFGSSGDRARVVIPFS-GKVEPLIFSVVRRKDVKKIRNENIDLEIYTHS-APWPTTAPVPKALDILTESSDVV-PALLPASLQKLIAENEKYIVSIHLTDRGIADPLASQEK 192          
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Match: A0A7R9U0D3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U0D3_9VIRI)

HSP 1 Score: 57.8 bits (138), Expect = 1.680e-5
Identity = 46/161 (28.57%), Postives = 76/161 (47.20%), Query Frame = 1
Query:  421 GYAVVYIV----GRRRNYRIAREFI----TGVHDG-----LFFSHFLEAGPASEIPPADRRQLLAHDSCNTFLYYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFGEDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKG 864
            G+A++Y++    GRR N R+A  F     T    G     +F ++F + G +    PAD    +  ++  T+L+YA+G R C+ +   +    R  L+  +  L +P +    DRVTVEVA  ED +EP    +  +K  +   R    L+  T   +  G
Sbjct:    2 GFALLYLLNWLYGRRANSRVALAFAKRHCTPAAGGDAPASVFAANFAQCGISEN--PADGVMHILSEA--TYLFYASGRRNCAWLTATLACTARQCLYSRMAFLASPEA----DRVTVEVALNEDQVEPCALVLGRRKAARAARRADASLKASTAEVSLSG 154          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LUC0_ECTSI7.180e-15465.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1GAA4_9STRA2.030e-2129.88Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
UPI00090172402.810e-1726.30uncharacterized protein At5g49945-like n=3 Tax=Cam... [more]
A0A251RY58_HELAN1.030e-1527.56Uncharacterized protein n=2 Tax=Helianthus annuus ... [more]
F4PWV6_CAVFA6.680e-1528.57DUF1682 family protein n=1 Tax=Cavenderia fascicul... [more]
A0A812X2A9_SYMMI1.380e-1426.82Ccdc47 protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A7S2ZAK7_9RHOD6.260e-1329.45Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A6T6MV56_9RHOD4.250e-827.27Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BLD8_9RHOD9.800e-829.19Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7R9U0D3_9VIRI1.680e-528.57Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2123889..2126340 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.4
Seed ortholog evalue1.5e-125
Seed eggNOG ortholog2880.D8LUC0
Preferred nameCCDC47
KEGG rclassRC00741,RC01491,RC01492,RC03042
KEGG koko:K04035
KEGG ReactionR06265,R06266,R06267,R10068
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005791,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006983,GO:0006984,GO:0006996,GO:0007029,GO:0007154,GO:0007165,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009607,GO:0009791,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0012505,GO:0016043,GO:0019538,GO:0019941,GO:0023052,GO:0030163,GO:0030433,GO:0032501,GO:0032502,GO:0033554,GO:0034976,GO:0036503,GO:0042221,GO:0042592,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051603,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0065007,GO:0065008,GO:0071216,GO:0071704,GO:0071840,GO:0072507,GO:0098771,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.calcium ion binding
EggNOG OGsKOG2357@1,KOG2357@2759
Ec32 ortholog descriptionProtein of unknown function DUF1682
Ec32 orthologEc-14_004420.1
EC1.14.13.81
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1375
Cds size1374
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15634.1prot_C-linearis_contig8.15634.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 2123889..2126340 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930541.2878866-CDS-C-linearis_contig8:2123888..21241981622930541.2878866-CDS-C-linearis_contig8:2123888..2124198Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2123889..2124198 +
1690881122.69746-CDS-C-linearis_contig8:2123888..21241981690881122.69746-CDS-C-linearis_contig8:2123888..2124198Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2123889..2124198 +
1622930541.304472-CDS-C-linearis_contig8:2124571..21247821622930541.304472-CDS-C-linearis_contig8:2124571..2124782Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2124572..2124782 +
1690881122.7193522-CDS-C-linearis_contig8:2124571..21247821690881122.7193522-CDS-C-linearis_contig8:2124571..2124782Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2124572..2124782 +
1622930541.3249495-CDS-C-linearis_contig8:2125091..21257061622930541.3249495-CDS-C-linearis_contig8:2125091..2125706Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2125092..2125706 +
1690881122.7334156-CDS-C-linearis_contig8:2125091..21257061690881122.7334156-CDS-C-linearis_contig8:2125091..2125706Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2125092..2125706 +
1622930541.342342-CDS-C-linearis_contig8:2126102..21263401622930541.342342-CDS-C-linearis_contig8:2126102..2126340Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2126103..2126340 +
1690881122.744945-CDS-C-linearis_contig8:2126102..21263401690881122.744945-CDS-C-linearis_contig8:2126102..2126340Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2126103..2126340 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15634.1

>prot_C-linearis_contig8.15634.1 ID=prot_C-linearis_contig8.15634.1|Name=mRNA_C-linearis_contig8.15634.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=458bp
SALRLAARTLDTRDICAKRRLCFMWRVTRGSHQPVRPVCNNMANRIRYRG
PLFPGVLTTTAAATLLLATFTLTTATSRLGDLPLDDEFRTDPIFNYEETA
PLVAVWSDGKVSMAGLLSMQWARQELHLTMLEYFGLAMLVGYAVVYIVGR
RRNYRIAREFITGVHDGLFFSHFLEAGPASEIPPADRRQLLAHDSCNTFL
YYATGSRRCSGVLVRIELANRHDLFMLLWGLFNPASVRTTDRVTVEVAFG
EDDIEPVIFAVAPKKDLKKILRDVPHLQDYTTATATKGPSSLLPLGLVCL
SDSSALADPLLQPAAKALSEHASLLELLHVTDQNAEPILGQEETPRKALR
FAFRLPEGDKVGPTKMMALALDYIDILTNLRMSAATKKKALDKREAVQKR
KSKLTHLQRQERYQQLKNERLQREREEYENLTPEQKRRRDLKEEKKARKS
ARGKHKVR
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mRNA from alignment at C-linearis_contig8:2123889..2126340+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15634.1 ID=mRNA_C-linearis_contig8.15634.1|Name=mRNA_C-linearis_contig8.15634.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2452bp|location=Sequence derived from alignment at C-linearis_contig8:2123889..2126340+ (Chordaria linearis ClinC8C monoicous)
TCTGCTCTTCGCCTCGCGGCACGCACACTTGATACACGCGATATCTGCGC AAAACGTCGGCTCTGCTTTATGTGGCGTGTGACTCGTGGCAGCCACCAGC CTGTCCGCCCTGTGTGCAATAATATGGCGAATCGGATCCGTTACCGTGGG CCGTTGTTTCCGGGTGTTTTGACGACAACAGCCGCAGCCACCCTGCTGTT GGCCACGTTCACGTTGACTACAGCGACCTCCAGGTTAGGGGACCTGCCGC TGGACGACGAATTCCGCACGGACCCTATTTTTAACTACGAGGAAACTGCT CCTTTAGTAGGTATGTATGCCTGGCTTCACTGCCTGTCTGTGTAGTCTAG ACAAAAAACCCGACACGGCAAAGTGCTGGCGGAGGGCGACAGCGCTCGCG CGTCGCGCGTAGATGGCAGTAGCATGTACGACACGGTGGTGTTTGCCTGC CATTAAATTCCTTAGCTACCAGATGTGGCGGCAGTACACAACCTGTTATG GTGTATATGGTCCACGACAGGAAACACCCCCCTGTCCGCATCTCGAAGTT AGTATGAATAAGACAACAACAACGGCGACAAGACCGTGAGCTGTTGCCTG CACAAAGCAAGCCGTTATTGTACAAATGTGATGTTTCAAACCGCTCTCTC CGCGCCATGCCCTACTCCGCCCACGTTCCCCAGCGGTTTGGTCAGACGGG AAGGTTTCCATGGCAGGATTATTGTCCATGCAGTGGGCCAGGCAAGAGCT GCATCTTACCATGCTGGAGTATTTTGGGCTGGCGATGCTGGTTGGCTATG CCGTAGTGTACATCGTGGGCCGAAGACGGAACTATCGGATTGCTCGGGAG TTCATCACCGGCGTGCATGATGGGCTGTTCTTCAGCCACTTCCTGTGAGT CGGCAATGGCTCTCTACAGAAAAATGCCACCGCTGTGTGATTCTCTTTCT ATCTTATGCCTCCGCTGTTCTTGCTCGAGGCAGCTCTGTTTTTTTGTTTT TTTTAGGAGGCTCGGGTATGGGCCTTCGCTCCACACCAGACTTTTATTGA AGGCGCGTCTGTCTCGCGTAGGTGTGCGTACGAACGCGGTGCCTATGTAT GTACGAGTGCAGCAGCAAAGTTCTACAGCAGTCGCCACGATCCCCTGGAT TCGCTGTCTGAATAACGTCTGGTACACATCACCGTGGCTGCGATCGTTTT CAGGGAGGCCGGCCCTGCATCAGAGATCCCGCCGGCCGACAGGCGACAGC TCCTGGCGCATGACAGCTGCAACACCTTCCTCTACTACGCCACGGGGAGC CGGCGTTGCTCGGGCGTGCTGGTCAGGATCGAACTCGCCAACCGGCACGA CCTCTTCATGCTTCTCTGGGGCCTCTTCAACCCCGCCTCGGTCCGAACGA CGGACCGGGTCACGGTGGAGGTGGCCTTTGGGGAGGACGACATCGAGCCC GTGATCTTCGCCGTCGCGCCCAAGAAGGACCTGAAGAAGATCCTCCGGGA CGTGCCGCACCTCCAGGACTACACGACGGCCACGGCCACCAAGGGGCCGT CCTCGCTGCTCCCGCTCGGGCTCGTCTGCCTGTCCGACTCTTCCGCCCTC GCGGACCCGTTGCTGCAGCCCGCCGCCAAGGCCCTCTCAGAGCACGCGAG CCTTCTCGAGCTCCTGCACGTCACCGATCAGAACGCGGAGCCCATTTTGG GGCAGGAGGAGACGCCCCGGAAGGCGCTCAGGTTTGCCTTCCGGCTGCCG GAGGGGGATAAAGTGGGGCCGACAAAGATGATGGCACTGGCGCTCGACTA TATCGATATCTTGACCAAGTGAGAACAAACGATGTTTTCTGTTTTTGTCT TGGTCTGTTTTGCCGTGGAAAGAGGCGGGGAGCGTGCGTGTCGACTTGTA AGCACATGCATCGAATTCCCGTGCTTTCTGCGGTTTGTTTGATTCTGTAT GATTCGGGTTGCTTTATTTTATGTCACGAACGCACTGAGTTTGGTGTGCA GCATGAGTACGAATAGCTTGTTTCTTGCTGTGTCAAGCAAGTGAGAGGGA AAACAATTATTGCCGGTGTTGATCCTTCAAGACTCGACTGACGCAACGAG CGTGCGTTCCTCGTCAAGGACGTTCATCGCAAACCCCTTTAGTCCGATTC CAAACAATATACTACCCTGCGCGTAACGTGTTCCCCTCCCCCTTTCCTCA CCCGTGGAGCACAGCCTCAGGATGTCCGCGGCCACGAAAAAGAAGGCGTT GGACAAACGAGAGGCCGTGCAGAAGCGCAAGTCGAAGCTGACGCACTTGC AGAGGCAGGAGCGGTACCAGCAGCTGAAGAACGAGAGGCTGCAGCGAGAA CGGGAAGAGTATGAGAACCTCACGCCGGAGCAGAAACGGCGACGAGACTT GAAAGAAGAGAAGAAGGCCAGGAAAAGTGCCAGAGGAAAGCACAAGGTAA GA
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Coding sequence (CDS) from alignment at C-linearis_contig8:2123889..2126340+

>mRNA_C-linearis_contig8.15634.1 ID=mRNA_C-linearis_contig8.15634.1|Name=mRNA_C-linearis_contig8.15634.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2748bp|location=Sequence derived from alignment at C-linearis_contig8:2123889..2126340+ (Chordaria linearis ClinC8C monoicous)
TCTGCTCTTCGCCTCGCGGCACGCACACTTGATACACGCGATATCTGCGC
AAAACGTCGGCTCTGCTTTATGTGGCGTGTGACTCGTGGCAGCCACCAGC
CTGTCCGCCCTGTGTGCAATAATATGGCGAATCGGATCCGTTACCGTGGG
CCGTTGTTTCCGGGTGTTTTGACGACAACAGCCGCAGCCACCCTGCTGTT
GGCCACGTTCACGTTGACTACAGCGACCTCCAGGTTAGGGGACCTGCCGC
TGGACGACGAATTCCGCACGGACCCTATTTTTAACTACGAGGAAACTGCT
CCTTTAGTAGTCTGCTCTTCGCCTCGCGGCACGCACACTTGATACACGCG
ATATCTGCGCAAAACGTCGGCTCTGCTTTATGTGGCGTGTGACTCGTGGC
AGCCACCAGCCTGTCCGCCCTGTGTGCAATAATATGGCGAATCGGATCCG
TTACCGTGGGCCGTTGTTTCCGGGTGTTTTGACGACAACAGCCGCAGCCA
CCCTGCTGTTGGCCACGTTCACGTTGACTACAGCGACCTCCAGGTTAGGG
GACCTGCCGCTGGACGACGAATTCCGCACGGACCCTATTTTTAACTACGA
GGAAACTGCTCCTTTAGTAGCGGTTTGGTCAGACGGGAAGGTTTCCATGG
CAGGATTATTGTCCATGCAGTGGGCCAGGCAAGAGCTGCATCTTACCATG
CTGGAGTATTTTGGGCTGGCGATGCTGGTTGGCTATGCCGTAGTGTACAT
CGTGGGCCGAAGACGGAACTATCGGATTGCTCGGGAGTTCATCACCGGCG
TGCATGATGGGCTGTTCTTCAGCCACTTCCTCGGTTTGGTCAGACGGGAA
GGTTTCCATGGCAGGATTATTGTCCATGCAGTGGGCCAGGCAAGAGCTGC
ATCTTACCATGCTGGAGTATTTTGGGCTGGCGATGCTGGTTGGCTATGCC
GTAGTGTACATCGTGGGCCGAAGACGGAACTATCGGATTGCTCGGGAGTT
CATCACCGGCGTGCATGATGGGCTGTTCTTCAGCCACTTCCTGGAGGCCG
GCCCTGCATCAGAGATCCCGCCGGCCGACAGGCGACAGCTCCTGGCGCAT
GACAGCTGCAACACCTTCCTCTACTACGCCACGGGGAGCCGGCGTTGCTC
GGGCGTGCTGGTCAGGATCGAACTCGCCAACCGGCACGACCTCTTCATGC
TTCTCTGGGGCCTCTTCAACCCCGCCTCGGTCCGAACGACGGACCGGGTC
ACGGTGGAGGTGGCCTTTGGGGAGGACGACATCGAGCCCGTGATCTTCGC
CGTCGCGCCCAAGAAGGACCTGAAGAAGATCCTCCGGGACGTGCCGCACC
TCCAGGACTACACGACGGCCACGGCCACCAAGGGGCCGTCCTCGCTGCTC
CCGCTCGGGCTCGTCTGCCTGTCCGACTCTTCCGCCCTCGCGGACCCGTT
GCTGCAGCCCGCCGCCAAGGCCCTCTCAGAGCACGCGAGCCTTCTCGAGC
TCCTGCACGTCACCGATCAGAACGCGGAGCCCATTTTGGGGCAGGAGGAG
ACGCCCCGGAAGGCGCTCAGGTTTGCCTTCCGGCTGCCGGAGGGGGATAA
AGTGGGGCCGACAAAGATGATGGCACTGGCGCTCGACTATATCGATATCT
TGACCAAGGAGGCCGGCCCTGCATCAGAGATCCCGCCGGCCGACAGGCGA
CAGCTCCTGGCGCATGACAGCTGCAACACCTTCCTCTACTACGCCACGGG
GAGCCGGCGTTGCTCGGGCGTGCTGGTCAGGATCGAACTCGCCAACCGGC
ACGACCTCTTCATGCTTCTCTGGGGCCTCTTCAACCCCGCCTCGGTCCGA
ACGACGGACCGGGTCACGGTGGAGGTGGCCTTTGGGGAGGACGACATCGA
GCCCGTGATCTTCGCCGTCGCGCCCAAGAAGGACCTGAAGAAGATCCTCC
GGGACGTGCCGCACCTCCAGGACTACACGACGGCCACGGCCACCAAGGGG
CCGTCCTCGCTGCTCCCGCTCGGGCTCGTCTGCCTGTCCGACTCTTCCGC
CCTCGCGGACCCGTTGCTGCAGCCCGCCGCCAAGGCCCTCTCAGAGCACG
CGAGCCTTCTCGAGCTCCTGCACGTCACCGATCAGAACGCGGAGCCCATT
TTGGGGCAGGAGGAGACGCCCCGGAAGGCGCTCAGGTTTGCCTTCCGGCT
GCCGGAGGGGGATAAAGTGGGGCCGACAAAGATGATGGCACTGGCGCTCG
ACTATATCGATATCTTGACCAACCTCAGGATGTCCGCGGCCACGAAAAAG
AAGGCGTTGGACAAACGAGAGGCCGTGCAGAAGCGCAAGTCGAAGCTGAC
GCACTTGCAGAGGCAGGAGCGGTACCAGCAGCTGAAGAACGAGAGGCTGC
AGCGAGAACGGGAAGAGTATGAGAACCTCACGCCGGAGCAGAAACGGCGA
CGAGACTTGAAAGAAGAGAAGAAGGCCAGGAAAAGTGCCAGAGGAAAGCA
CAAGGTAAGACCTCAGGATGTCCGCGGCCACGAAAAAGAAGGCGTTGGAC
AAACGAGAGGCCGTGCAGAAGCGCAAGTCGAAGCTGACGCACTTGCAGAG
GCAGGAGCGGTACCAGCAGCTGAAGAACGAGAGGCTGCAGCGAGAACGGG
AAGAGTATGAGAACCTCACGCCGGAGCAGAAACGGCGACGAGACTTGAAA
GAAGAGAAGAAGGCCAGGAAAAGTGCCAGAGGAAAGCACAAGGTAAGA
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