mRNA_C-linearis_contig8.15603.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15603.1
Unique NamemRNA_C-linearis_contig8.15603.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI)

HSP 1 Score: 506 bits (1302), Expect = 1.040e-173
Identity = 251/277 (90.61%), Postives = 264/277 (95.31%), Query Frame = 3 
Query:  183 MPTGRPAPEEPQFPWRSDMLEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGITTTGTPCGT 1013
            MPTGR AP EP FPWRSDML GK AIVTGGSAGIGAAIT +LLQAGASV VLARSR K+D L+P LEE+KLPVDKT FISIDL+STD IR+AA+EANEWAGGCADILVNNAGVA+IAPILEA+VEDWDWTMNVNVRAPFIMAQECAKRMIARG+GGKIVSTSSTASLFALHDHAAYCTSKAAI GLT+VMSAEWSKYDINCNTVGPTIVLTDMG+KAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSS+QMCGQMLLLDGGITTTGTPCGT
Sbjct:    1 MPTGRAAPAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCGT 277
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 2.470e-159
Identity = 231/258 (89.53%), Postives = 246/258 (95.35%), Query Frame = 3 
Query:  237 MLEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGITTTGTPCG 1010
            ML  K AIVTGGSAGIGA+IT +LL+AGASV VLARSR KFD LLP LEEKKLPVDKTHFI IDL+STDDIRRAA+EAN+WAGGCADILVNNAGVA+IAPILEAT+EDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIV+TSSTAS FALHDHAAYCTSKAAINGLT+VMSAEWSK+DINCNT+GPTIVLTDM +KAWG+PEKGDPM+DRTPLGRFAEPWEMAHGVVYLVSPSS QMCGQMLLLDGGITTTGTPCG
Sbjct:    1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGITTTGTPCG 258
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: A0A6H5JWZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWZ3_9PHAE)

HSP 1 Score: 470 bits (1210), Expect = 8.370e-157
Identity = 248/343 (72.30%), Postives = 262/343 (76.38%), Query Frame = 3 
Query:  183 MPTGRPAPEEPQFPWRSDMLEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNV------------------------------------------NVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLT-------------------------QVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGITTTGTPCG 1010
            M TGR APEEP FPWR DML GK AIVTGGSAGIGA+IT +LL+AGASV VLARSR KFD LLP LEEKKLPVDKTHFI IDL+STDDIRRAAIEAN+WAGGCADILVNNAGVA+IAPILEAT+EDWDWTMNV                                          NVRAPFIMAQECAKRMI RGKGGKIV+TSSTAS FALHDHAAYCTSKAAINGLT                         +VMSAEWSK+DINCNT+GPTIVLTDMG+KAWGEPEKGDPM+DRTPLGRFAEPWEMAHGVVYLVSPSS+QMCGQMLLLDGGITTTGTPCG
Sbjct:  130 MATGRAAPEEPPFPWRCDMLAGKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKLPVDKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGRLVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTIGPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGITTTGTPCG 472
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA)

HSP 1 Score: 245 bits (626), Expect = 9.190e-73
Identity = 134/257 (52.14%), Postives = 175/257 (68.09%), Query Frame = 3 
Query:  219 FPWRSDMLEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGIT 989
            FP+R  +L  + A+VTGG+ GIG AIT +L++AGAS  V+ARS+ KFD +L   E  +   D   FI  DL S D    A   A  WA G  DILVNNAGVA + P+ E  VE WD  M VN RAPF+MAQ CA  MI + + GKI++ SS A    + DHAAYC SKAAI+ LT+VM+ EW+K++I  N++GPT+V+T+MG + WG    G+PM  RTP+GRFAEP E+A+ VVYL S +S  +CGQ LL++GG+T
Sbjct:    7 FPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFLQGSAD---FIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQ-RAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: D7G8H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H2_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 8.720e-64
Identity = 110/136 (80.88%), Postives = 119/136 (87.50%), Query Frame = 3 
Query:  183 MPTGRPAPEEPQFPWRSDMLEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVR 590
            M TGR   EEP FPWR DML GK AIVTGG +GIGA+IT +LL+AGASV VLARSR KFD LLP LEEKKLPVDKTHFI IDL+STDDIRRAA+EAN+WAGGCADILVNNAGVA+IAPILEAT+EDWDWTMNV  R
Sbjct:    1 MATGRAPREEPPFPWRCDMLAGKAAIVTGGRSGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDKTHFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVRNR 136
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: A0A7J7ILT2_9RHOD (Short-chain dehydrogenase reductase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILT2_9RHOD)

HSP 1 Score: 216 bits (550), Expect = 1.060e-61
Identity = 119/258 (46.12%), Postives = 172/258 (66.67%), Query Frame = 3 
Query:  225 WRSDMLEGKYAIVTGGSAGIGAAITTSLLQAGAS-VVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEA-NEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKR-MIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGIT 989
            +R+D+L+GK A+VTG S GIGAAI    L+AG S +V+++R + +F   L K  E K    +  F S++L  T  + R A +   +W+    DILVNNAG+A + P+ E ++ +W+ TM VNVRAPF++A++  +  MI RG GGKI++ SS ASL  + +HAAYC+SKAA+N LT+ M+ EW  Y I CN V P+I++TDMG + W +PEK  P++ R P+GRFA P E+A  V++L SP +  + GQ +  DGG T
Sbjct:    3 FRADVLQGKVAVVTGASRGIGAAIADCFLEAGVSGLVLISREQTEFVHQLRKRAELK--GSRVGFYSLELEDTAAVERCAEQILQDWSQ--VDILVNNAGLALLNPLTELSIGEWERTMAVNVRAPFLLARKFVRESMIPRGVGGKIINISSVASLGGVSEHAAYCSSKAALNSLTKTMAIEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: M1USM2_CYAM1 (Short chain dehydrogenase/reductase family protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1USM2_CYAM1)

HSP 1 Score: 213 bits (543), Expect = 1.090e-60
Identity = 117/258 (45.35%), Postives = 165/258 (63.95%), Query Frame = 3 
Query:  225 WRSDMLEGKYAIVTGGSAGIGAAITTSLLQAGAS-VVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIE-ANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKR-MIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGIT 989
            +RSD L+GK A++TG S GIGAAI    L+AG   + +++R+  +F   L K  E +    K  F S++LA T+ + R A +   +W     DILVNNAG+A + P+ E +  DWD TM VNVRAPF++++   +  MI RG GGKI+  SS A+   + +HAAYC SKAA+N LT+ M+ EW  Y I CN V P+I++TDMG + W +PEK  P++ R P+GRFA P E+A  V++L SP +  + GQ +  DGG T
Sbjct:    3 FRSDALQGKVAVITGASRGIGAAIAECFLEAGVQGLALISRTPSEFVTQLRKRAESR--GTKVGFYSLNLADTEAVERTARQIVQDWEH--VDILVNNAGIALLNPLTELSTVDWDLTMTVNVRAPFLLSRIFVRESMIPRGAGGKIIHISSVAAFGGVPEHAAYCASKAALNSLTKTMAVEWGPYGIQCNVVCPSIIMTDMGRQVWEDPEKHGPVLARVPIGRFANPPEIARVVLFLASPENCVVNGQCIAPDGGYT 256
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: A0A517VZM1_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZM1_9PLAN)

HSP 1 Score: 212 bits (539), Expect = 3.760e-60
Identity = 119/250 (47.60%), Postives = 161/250 (64.40%), Query Frame = 3 
Query:  240 LEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGIT 989
            ++GK A+VTG S GIGA I  +L QAGA V++ AR     DDL+   E+ +    +   I  DL S + +   A +A E+     DILVNNAG   +AP  E TVEDWD    VN+RAPFI+++  ++ M A+ K GKI++ SS A + AL  HAAY  SK  +N LT+VM+AE   ++I CN V PT++LT++G K WG PEKG+PM D+ PL RF +P E+A  V+YL SP+S  M GQ++ LDGG T
Sbjct:   10 VKGKTALVTGASRGIGAEIAMNLAQAGAEVLITARHH---DDLIQVCEKIRSIGSRCEAIEADLISINGVEEVAQKAFEFFSTI-DILVNNAGTIEVAPFWETTVEDWDQMQAVNLRAPFILSKILSEPMRAQ-KQGKIINISSVAGIAALAGHAAYSASKGGLNQLTKVMAAELGPFNIQCNAVAPTVILTELGQKVWGSPEKGEPMKDKIPLHRFGKPLEVADLVLYLASPASDMMTGQVIALDGGYT 254
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: A0A518B898_9BACT (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B898_9BACT)

HSP 1 Score: 211 bits (538), Expect = 6.130e-60
Identity = 118/256 (46.09%), Postives = 162/256 (63.28%), Query Frame = 3 
Query:  240 LEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVD----KTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGITTT 995
            L GK A+VTG S G+GA I T   +AGA V ++AR  +        L + K  V+    +   I+ DL +T+  R AA  A E  G   DILVNNAG+  +  + EAT++ WD TM +N+RAPF++A+E A RMI +G G KIVS SS A +  L +H AYC SK  +  L  VM AEWS+++I  N + PT+V+TDMG + W +P K  PM+DR P+GRF EP E+A   ++L SP+S  +CGQ++ +DGGIT T
Sbjct:   10 LIGKRALVTGASRGLGAQIATLFAEAGADVALVARDEEG-------LHQTKATVEAGGRQALVIAADLGTTEGPREAASTALEHFGAI-DILVNNAGIVHLESLREATIDHWDETMAINLRAPFLLARELAPRMIEQGSG-KIVSISSVAGVRGLPNHGAYCASKGGLQMLNAVMVAEWSRHNIQANVIAPTVVMTDMGKQVWSDPAKSGPMLDRIPMGRFGEPVEIADLALFLASPASDFVCGQVIEIDGGITQT 256
[Close]
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Match: A0A2W2BIP4_9HYPH (Short-chain dehydrogenase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BIP4_9HYPH)

HSP 1 Score: 209 bits (531), Expect = 5.380e-59
Identity = 116/250 (46.40%), Postives = 159/250 (63.60%), Query Frame = 3 
Query:  240 LEGKYAIVTGGSAGIGAAITTSLLQAGASVVVLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWAGGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDINCNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSAQMCGQMLLLDGGIT 989
            L+GK+A+VTG S GIG      L  AGA +  + R R+   ++   +E       +   IS D+A+ D   +AA +A  + G   DILVNNAG+A I  + +A V DWD TM VN+RAPF++A+E    MI R KGGKI++ SS A +  L  HAAYC SK  +N LT+VM+ EW+K++I  NTV PT++LT MG + WG+PEKGDPM  + P GRF  P E+A  +++L S +S  +CG  LL+DGG T
Sbjct:   10 LKGKHALVTGASKGIGLETAKVLADAGADIAAVGRDREGLAEVKAAVEAMGR---RCVAISADMATADGPVKAAHDALAYFGAI-DILVNNAGIALIDRLEDARVADWDATMAVNLRAPFLLARELVPGMIER-KGGKIINVSSQAGVVGLEGHAAYCASKGGLNMLTKVMTVEWAKHNIQINTVCPTVILTPMGEQVWGQPEKGDPMKAKIPGGRFGRPMEVADAILFLASSASDMICGHDLLVDGGYT 254
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8H1_ECTSI1.040e-17390.61Similar to L-xylulose reductase (XR) (Dicarbonyl/L... [more]
D7G8H0_ECTSI2.470e-15989.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWZ3_9PHAE8.370e-15772.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YTK4_9STRA9.190e-7352.14Putative short-chain dehydrogenase n=1 Tax=Tribone... [more]
D7G8H2_ECTSI8.720e-6480.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J7ILT2_9RHOD1.060e-6146.12Short-chain dehydrogenase reductase n=1 Tax=Cyanid... [more]
M1USM2_CYAM11.090e-6045.35Short chain dehydrogenase/reductase family protein... [more]
A0A517VZM1_9PLAN3.760e-6047.603-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
A0A518B898_9BACT6.130e-6046.092-dehydro-3-deoxy-D-gluconate 5-dehydrogenase n=1 ... [more]
A0A2W2BIP4_9HYPH5.380e-5946.40Short-chain dehydrogenase n=1 Tax=Aestuariivirga l... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1768767..1779527 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score510.8
Seed ortholog evalue4.2e-142
Seed eggNOG ortholog2880.D7G8H1
Preferred nameDCXR
KEGG rclassRC00102,RC00154,RC01491
KEGG koko:K00081,ko:K03331
KEGG ReactionR01904,R02581,R09420
KEGG Pathwayko00040,ko00590,ko00980,ko01100,map00040,map00590,map00980,map01100
KEGG ModuleM00014
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004090,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005874,GO:0005881,GO:0005886,GO:0005902,GO:0005903,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006006,GO:0006063,GO:0006064,GO:0006082,GO:0006116,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016651,GO:0016655,GO:0019318,GO:0019321,GO:0019323,GO:0019362,GO:0019585,GO:0019637,GO:0019640,GO:0019674,GO:0019752,GO:0022607,GO:0032787,GO:0034641,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0043621,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046395,GO:0046483,GO:0046496,GO:0050038,GO:0051167,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072524,GO:0090407,GO:0098858,GO:0098862,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1901135,GO:1901137,GO:1901159,GO:1901360,GO:1901564,GO:1901575,GO:1901576
EggNOG free text desc.L-xylulose reductase (NAD ) activity
EggNOG OGsKOG1207@1,KOG1207@2759
EC1.1.1.10,1.1.1.184
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size2081
Cds size843
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15603.1prot_C-linearis_contig8.15603.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 1768949..1778471 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930534.2492735-UTR-C-linearis_contig8:1768766..17689481622930534.2492735-UTR-C-linearis_contig8:1768766..1768948Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1768767..1768948 +
1690881118.8360703-UTR-C-linearis_contig8:1768766..17689481690881118.8360703-UTR-C-linearis_contig8:1768766..1768948Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1768767..1768948 +
1622930534.3586023-UTR-C-linearis_contig8:1778471..17795271622930534.3586023-UTR-C-linearis_contig8:1778471..1779527Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1778472..1779527 +
1690881118.9305458-UTR-C-linearis_contig8:1778471..17795271690881118.9305458-UTR-C-linearis_contig8:1778471..1779527Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1778472..1779527 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930534.2634058-CDS-C-linearis_contig8:1768948..17690741622930534.2634058-CDS-C-linearis_contig8:1768948..1769074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1768949..1769074 +
1690881118.8597646-CDS-C-linearis_contig8:1768948..17690741690881118.8597646-CDS-C-linearis_contig8:1768948..1769074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1768949..1769074 +
1622930534.2808394-CDS-C-linearis_contig8:1769339..17695441622930534.2808394-CDS-C-linearis_contig8:1769339..1769544Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1769340..1769544 +
1690881118.8738647-CDS-C-linearis_contig8:1769339..17695441690881118.8738647-CDS-C-linearis_contig8:1769339..1769544Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1769340..1769544 +
1622930534.2993505-CDS-C-linearis_contig8:1776138..17762031622930534.2993505-CDS-C-linearis_contig8:1776138..1776203Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1776139..1776203 +
1690881118.8853836-CDS-C-linearis_contig8:1776138..17762031690881118.8853836-CDS-C-linearis_contig8:1776138..1776203Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1776139..1776203 +
1622930534.3181393-CDS-C-linearis_contig8:1776727..17768951622930534.3181393-CDS-C-linearis_contig8:1776727..1776895Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1776728..1776895 +
1690881118.8947988-CDS-C-linearis_contig8:1776727..17768951690881118.8947988-CDS-C-linearis_contig8:1776727..1776895Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1776728..1776895 +
1622930534.3317306-CDS-C-linearis_contig8:1777495..17775871622930534.3317306-CDS-C-linearis_contig8:1777495..1777587Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1777496..1777587 +
1690881118.9039094-CDS-C-linearis_contig8:1777495..17775871690881118.9039094-CDS-C-linearis_contig8:1777495..1777587Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1777496..1777587 +
1622930534.3462594-CDS-C-linearis_contig8:1778284..17784711622930534.3462594-CDS-C-linearis_contig8:1778284..1778471Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1778285..1778471 +
1690881118.9140806-CDS-C-linearis_contig8:1778284..17784711690881118.9140806-CDS-C-linearis_contig8:1778284..1778471Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1778285..1778471 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15603.1

>prot_C-linearis_contig8.15603.1 ID=prot_C-linearis_contig8.15603.1|Name=mRNA_C-linearis_contig8.15603.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=281bp
MPTGRPAPEEPQFPWRSDMLEGKYAIVTGGSAGIGAAITTSLLQAGASVV
VLARSRKKFDDLLPKLEEKKLPVDKTHFISIDLASTDDIRRAAIEANEWA
GGCADILVNNAGVASIAPILEATVEDWDWTMNVNVRAPFIMAQECAKRMI
ARGKGGKIVSTSSTASLFALHDHAAYCTSKAAINGLTQVMSAEWSKYDIN
CNTVGPTIVLTDMGSKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLV
SPSSAQMCGQMLLLDGGITTTGTPCGTQYD*
back to top

mRNA from alignment at C-linearis_contig8:1768767..1779527+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15603.1 ID=mRNA_C-linearis_contig8.15603.1|Name=mRNA_C-linearis_contig8.15603.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10761bp|location=Sequence derived from alignment at C-linearis_contig8:1768767..1779527+ (Chordaria linearis ClinC8C monoicous)
CACGAATTCACCGGGATTTCGAGAGAACACAACGGCAGTCGGGACAACCA
ACCTGTGGGTAAAGTTTAAAGTTGTTCTGGGCTGCTGGCTCTTCTCGCCC
TCGACCTTCCAGTCCACTTCCTCTCTAGCCTCATTTTGCCCTCTTTCCTC
TTTCCTCTTTCGGCACACACACACGCACAACTATGCCTACCGGAAGACCC
GCGCCCGAGGAGCCTCAGTTCCCGTGGAGGAGCGATATGCTCGAGGGAAA
GTACGCCATCGTGACGGGAGGGAGTGCGGGCATCGGTGCAGCCATCACGA
CTTCCCTGGTGAGAGAGACAGAGAGAGGTTATTCTTACAATAGAAGCGTC
AGGAGCTTTTGGCCGCCGTTGTCATCCTGCTGCTGCTGTTGCTGCTGTTG
CTGCTGCTGCTGCTGCTGCTGCATTGGCTGCACCGATTGCTGCCCGCCAT
TTGTTCTTCCTAGGTTTGCACGCGCATATGATATGTAACGGTATGTGCCC
TCCCGAACACACAGCAGAAAAACGCGCGAAATCTGATGTAGCGCTCTGGT
GCCTCTTCCCGCTGCTGTGCCAGCTCCAAGCAGGTGCCTCCGTCGTGGTT
CTCGCGAGGAGCCGCAAGAAGTTCGACGACCTCCTCCCCAAACTCGAGGA
GAAGAAGCTTCCGGTGGACAAGACCCACTTCATCTCCATCGATCTTGCGA
GCACGGACGACATCAGGCGGGCTGCCATCGAGGCGAACGAGTGGGCGGGC
GGCTGCGCGGACATCCTCGTCAACAACGGTGAGCCAGGCTGTGGTCGAGC
GTGATTGCGTGGCCGAGAAAATCTCGGCAGCAAAGGGTGTGGGGCGTCTC
GTGGCACACAGGCAGAGGGAGGCTCTGTTTCGCTTCGCACTTTCACACCC
CGGGAAGATAGGATAAAGTCACGGCTCGATATCTTTTAGGATATATGCCC
GCGGGTGTCAATTTATTGCCTTCGGCTGGCAAAGCATGCGCGCGTGCCCC
GCTGTTTATTGAGGTGGCGCGTGACAACAACCACAACAGAGGCTTCGGAC
ACGGCAAGCCACGGGGTCCAGCTAGCCTAGCAGCTCAACTGCAGCAGTAG
TAACCTTTTGCTTTCAATACGCAAAAGGAGCACTACTCCCACATGAGATT
CATCTTTTTTTTGCGTCAACATTTCGATGTTCCGAAAAAATCTGCACAAC
AAAACCAGACACGCACACACACACACACACACACACCACACACACACACC
GAAAAAATCTGCACAACAAAACCAGACACGCACACACACACACACAACCG
CAGGAGGGGGTCCAACCCCCCCCTCCTGTGTGACCCCGGTTGGGTCGTCT
AGCTAGTAGAAGTGGCGGATGGGGGCCAGAGGGGCAGACGACAGAGTCCA
ATAATGGGAGGATAAAACAAAAAAACAAAACAAAAAAAAAACACACACAC
ACACACACGCGCGCGCGCGCGCGCGTCGGAGAGAGGGGGACAGCTGCTGC
TGCACGACGACCTAGAGCACGGCGGTGCCGTCGCTGAGTAGCTAGCGGTG
ACGCAGAGCGGGTAGTGCTGTACATGCCCGAAACCCAGCAAGCTGTTGCA
CCTCAAAAACTCGAGAATCACAGCAGTATCACATCATCACTTCATGTGTT
ATATCTGCTCGTGACTGCTGTTCCCGTTCCACAAGTTTGGCCGTTCATTT
TCAAATTTTCATTTTTCAAGCCTCCACCATCGGGTCCATTTTATTTTGTT
AGTAAATATAAAATATACCACCTTTTTCGTTTTTTAGGGTAAGTTAACCT
GTGACCACGGGAATTGGCCGTGTCTGTTGGATCAGTACGGACAAAGGGGG
TACTGGTGAAGAGAGACGGGATGGTTTTTAATGTCAAGACAGCAACAACC
ATCCCGTAAATTCATTTCCTAATTGATCCGCTCCAAAGAGGGCCAAAGAG
AGCCAAGGCGGAGATGAATGGACGTGATCCAGGAACGCCCATGATTTGTC
TGCGATTGAAGTCAACTGCTGCGTACTGACTTCTGCCCGGCCGGTCTGTC
TTCAAACAGCACGCATGTATTCTGGTTCAAGTATATGCCGGCATTTGTTC
GTGTTGTGTGTCGCCCGCCGGCGGCTTCTTGGAGACTACTCTTTGATCGT
ATATTTATATTTCGCTTGCGCGGTAGATCCCCAAGGTGGTAAATAGACAC
CATACGTATGAACCCACGCGAGGGCTCGCGCATGCAACAGCAAGCAGTCA
TCCCGGTATCATGCCGACGTAGCTGTTTTGCCGGCAATACACCGGGACCT
ATAATATGCCGGCACCGGCATTTTGCAGGGTGCGAAAAGTTCCCCTTGAA
TGGCGATACCCGCGCCACCGACGATACCATTGCCGACATCCATACAAACA
ATGTTCGCGTGTATCATGAGGCCAACAGAACCCACAAGTGATGAGAAATG
AAGTAGGTGCCGCAGGTGTTGTTGACAAGGAGGGCACCAGGCACCAGAGG
CGAGTGTACATGATCGCGGCGTGCGTACGTGTAGTCTACGGCAGCCGCTC
TGCTGTGTGCACAGCAGACTCATTGACCCAGGCTGTTGACTACCATATCT
ATTTTGTAATTGTGGTGCTTACCACCATCCGTCCGCCCAAGCATCCTCAT
TCCTCATTCAACTTCCGAAATACAAAACACAAACGAAACAAAATTACCTG
TATCTACGGGACTACTGCTGTGATAAAGAAAGATGAAATGAAAAACAACG
CGCAGGGCCAAGGGTGCACACCGAAAAGTGAAAACGACACCTCACCCATG
TTGTTGTTATTGTCTTCGCATTAAAAAAACCATCCCGGTCCCGTCTCTAT
TGTTGTTGTTGTTGTTAACTTCACATAAAACCGGATGTCAGTTGTAAATG
CCAAAATCTAGCAAATGCTCCAGCCCGTGGTCACGAAAGTACTAGAGCCA
TCAGAAGATCTAAAGGAACGCACATCTAGCAGCGAAAAAAGGTACACAAG
CCCGAAGAGGTACATCTAATCCCTGCACACCTATGCGTGTCCACAACTGA
CCTACACGTCCGCCCCACCGTTCGACTACAGCAGCATCACCCCCTCCCTG
TTTCACTCTCTACCAAAAACGTTTTGCCGACTACAGCGATTTGCTGTCTG
GAGTGCTGTCTGTACAAACACAATGGTAGGCACGTGGAACAAGAAGCTGG
CGGAGCACGGCTGCCGTCTGAAGTGCTGTCAGAATGTGTCCGCGGACATA
CAGTGAAAAGAGAACAAACAACCAAAGCCATCTTGCACTTGACAATCACC
CACGAATCGATCCCGATCGTCTCGGTTGGGTGCAGCAGTGTAACACTGAC
ACTGACTAAGAAATCGTTCCACACTAAAGGGGTCTTCCACGATGCAGGTT
TTACCCAAAAAGGCACCTGGGGTATCACGCCATCTCTGACGCGTCTCTCT
ACAAAACCAGTGCAGACGTCACACACACACACCCAGCACCGATACAGGGG
AAGAAAACGCAAAAATTGACAGTCACAAAATGTTTGTCCGTCGCCATGGG
CCGATGTCTCCGGTGACGCTGAGCCGATGTCGCCGGTGACGCTGTAGTAG
CATGACCACACTCGACCCGCTCCGTCCGTACATGCTCTCGTTGTCGTCCT
TCCCAGTCGGTTCCTCGCTTTCTCCCTCGTTGTACTCAAGGTTCTTGGTC
TTGAAACAAAAATTCTCGCGCCAAAGGGGTCAACCACCCCCAATCAGCTC
GTCACCACCAGCTCCCTCCTCCTTTGGTGGCGAAGCCTGGTAACTCAGAC
AATACAGCTCCCTCTAGCAAACCTAGGGCCGTGTACATAGTGTCCTTTCA
CCCCTGATGGTGTCTGCCTCCGCGCACAAAAGTGAGATGGGCATTGCTGC
CTACACCGACGGCCATAAAGGCCCGCGCACCTCTGGACTTTTGTGCCTGA
CCCATCAGTGCCGACCCAACTCTACCACTGCGCACGCCTCACGGCGGATG
CGCGGCAGCAAGAAGGTATCGGGCTCCTTGAGGGTGAGTCTAGCCTTGCT
CGCTAGAAAGACCCCCCCCCTCGCTGTAGGCCATGCCTAGGCCAAAGCCT
TGCCAAGGCAGCGAGGGGAAGAAGGAAGAGTTAGAGTAGATTAAAAGCGA
CCAAACTTTAAAAAATCAAGTGTTTTGAATCTTTACTTTTACTTGATTTT
AGAGTACCGATACCCCCCCCCCCCGGGCAAAATGGGGGGTGTGGTGTTTT
AATTTTTTTTTTTGTGCGCCCTTGGCAGGGCCGGAAATTGAAAGAAACAC
TAATAACCACAGCCATACCATCTCAACACATAGAGGTAAGAATTATTCAT
GCAGCTCGCCCTCGAGCGCTGAGCGTGAAGCGGGGCGACTCTCACCCGTC
TTAGGTCAAGACGTTTTATTTGACTTTTCACCCTCGGACCCTCGCGGAGT
ACCGCCTTCGCGGCCGCTCAGCCAAAAATCTTTCCAGCACGGTCCCACTG
TCCCCCTGCCGCAGGATCGACGCCGGGCCGGCGACCCCAACAGCGCAACA
CTTGAAATCTCCTAAATCTTGACAATTTATGCTTTCTAATCTTCACCTCT
CACCATGTGTGTCACGCTTTGAGTTTTATTGAAAATCTCCACACCGGGAC
CGTCAGCAACAACATTCAGCCGTCTAGGTTGGGAGACACGTTGGCTCTGA
GGCGCAAGCAAGCTCAAGCAAAAAAGCCGGAGCCCGCACTCCTCTGTAAA
ATTTAATTTTCAAGACCAATTTTTTCATTTTTTGCGACAACAGGCGCTGA
ACATGACAGAATTCCGTCGCGCACGCCGGCTCTATTAGCTCGTCAGCAAC
TGGACGAGCACTCGCACGAATGCCCGATGCTGATCAACTCAGGGCATGTA
CACAGCAGTCAGCCGCCTTGATTGGTTGGTATACACTCAGAGTCGCGTTG
GCTCTGAGACGTAAGCAGGCTCAAGCAAACCCCGGAGCGCACCATCCTCT
ACAAATTTTCAAAACAATTTTTTTCCGCGAACAGGCTTTCCTTCCTGTCA
GTGGAAAGCGCTGAGTTCGTGTGTACATTTGAGGGAGAGACGGCTGAAAC
TCTCTCGCGGTAAAAATTACCAGCCAAGCACCGCAGAAGGTTGGTGGGGG
CGGGGCCTCAGGGAGACGAACCTTCTGTGTGACCACGGTTCAGATGTTCT
GGCAAGATGCCCCGCGTGGCAAGGCGCCCCTGCAAACTCTGGAAATAAAA
AATAAATGTTAAATGTGAAGACGACGAACAGGCGCTGAAGATGACGAAGG
TCTGTCGCGCACGCCGCGGCCCTATTATTCAGTACGCTGGCTCTATACAT
TAGTACGCCTGCTCTTTTTGGTTTTTTAGTCCACCGGCGCCCACGCGACC
ACACATCATCAGCTCCGAGGCCTCGACCAACATGAGCGATCTCAGCAAGG
TTTCCCCACTGAAACGCAAGCGAGTCCAAAACTGAAATTTCGGAGAAGAA
GGGCCAAGACCGAGTTTTCGACATGATCATGTGGCCTTTATTCTCCTGCG
GCGATGCCGTTCGCCGGTCACCTTTGATGTCGTAGATTTCCTTCATGTCC
TCTGCCATAGTTTCCACTACCAACTGAGCCCTGCGCTTAGTCTCGACTCA
AGCCTCTGGCATGTCTCAAGGTCACGCTCTTCGCGTAGCTATCAGCGGTG
TGATTACCGGCCATGGTGTCAGGAAGTGGATGCCATGGTTTTCTTTTCGC
TTAGTCTATTAGTCTATAGAGTAGAATGCTTTCGAATCAGCAACACATTG
TTGGTTCACGTATAGACTAGATAGTGCGGAAGAATAGTCCCCGCGCGCAG
CGATTATAATTCACGTATGATTCCATTTCATCGTCACCACACGTCACGAA
AGTCCTGTACATACATACATAATGCACAACAATGCCATAGAGCTTGCGAG
CAAACTCTCATGCCATCCATCTTCACTCTTGGCGTGCCCAACCTAACCTT
TCACATTCAATCCATCGCTATCACACACTTCACTTACACACACACCGTGC
TCGGAGGACGGTGGGGGCGATAGCCCCCCGCGTCCGAGGCCCTTGTAACG
CATATTCTTCCGCAACTGTCCCACCTACTGCTGTACACATATGTGTTCGA
CTTTGGGTTAGTGGGCAACAAAAATTGTGTGTGACCGACGATGTTCACGG
ACATCAGAGACACCCAAACCGGCATTCTACACAGCCCGCCCGGTGTTTTT
ATTGCCTATTTACCCTTTCGGCGTCATACCGGACCTCAACGTCCCAATCG
ATTTCCCCGGCGTCGTATGACCGGAGCCAGTACTACTGTCTGTTGTTTTT
GGAAGCAACAAGTACATCCTTGTTCTTTGCTTCTATTTGGCAGTGCTCTG
GGCTGCTGCTTCTTACCTGTAAACCTTGGGACAAAAACTTGAGCTTTCAT
TACTTATAGACAAAGCCGGTCGCCCCGGTGGCCTAGTGGGTTCGAGGTTA
AACCACTAGCAGCCAAGTCTGGAGTTTAATTCCAAGCAAAGGTGTTTATT
TTGCGACTTTGCAGGTGAAAACGATAACATAGCTGAAAAAGCTCGTGAGT
ACCAAACTTCGACTTAGCACGTTGACGAGGGAAAGGGATGGCTGCACCCT
TCTCGCGATAAAATCCAAGCCAAGCACCGGAGGAGGAAGGTGGGGCAAAA
AAGAAACAGAAAAAGAAGAAAAATGCCCCAGTGTTCACCCCCTCCTGTGT
GACCCCGGTTGGTTCTAGTTGTACAGAAAAATAAAAATACACTGAACAAG
TGTAGTACTCTAAATACACCGCAACGTGCAGTACACGTCTCGCCTTGATC
GGAAAGGGACTGTCGCCAAAATAAATGGGACGAAAACACACACACACATA
CGTGTATGCTGCGTCTGGTGCCTGTTTCCTTTATTGTTCTGTTGGAAACA
TATTCCCCCGCGGGGTACTTCCAAATTCAACGATTTTTTTGGCCGTTCAT
TTATGCGGGTGGAGAACCTATCAGCAAAGATGGCAGTTGACGCGTCGAGT
TTGGCCTGTCAAGGCCAGTAAAAAGCTGAATATATCCTACTCTAGTGTTG
GCAAGCTCCTTGACAGCGTCTGTCATCTTTGTCTCCCAGCAGGAAGCTAA
AATGAAAACTGCGGAACCCAACCTTGTGAATGGGGCGCGCGTACAGCTGT
GCATCCTTCTCTATTATCACTATTAAGTGCTGTTGCTTTTGGTAGGTAAA
GCGCTGACGAGTTTTTTTCAGGCGCTCTTGCACACACCGCGTTCTGTTGT
TTTACATCGGCTCTCGACTAACCCAACCTCCCGCCGTGCCCTCTCTTGGC
TGCCCCGTTCTCGTTGTTGCAGCGGGCGTGGCCAGCATCGCCCCCATCCT
CGAGGCCACCGTCGAGGACTGGGACTGGACCATGAACGTGAGAAAGAGAG
ACGAGACTAGGCAGACGAAATGCTGAGAGACTCATTACATACGTAGACGT
ACAACCACAAACGTACTCGGCCGCTTGTTGATCGTATAGACGGATGTGCA
TGGTAGGCGGCCTGTGTCGTCTCTCCTTTGTCTTGCGGCGTCTGGGTTGT
GTAAGCTGTCTGATGCAAAATAGTGAATATTACCTACGGTTCGTAATTCA
GCAACTGCTACATTATAGTGCACGGTTGCGATCACTGCTCACCCTTGAAC
ACAGCAGTAGGGCCAACTTAGCAGCTCAACTGTGATTTGGGGATCGAAAC
TGTTTTCCGCATCCGGGCTCTTTTCGTCGAAAGCGTCCTCGAAAATAGTC
CGCTTCTGGCGTTTTCTGAACTTCCTGAAGCATATCATCCATCTCTCCAA
AACAACAGCAGTACAGCAGTAGCTCCTCCCTCTCCCAAATACGTATTTCA
AAATCCGAGCCTTTTGTGTGTGCTGCATTGTGGCCGCTTGTATTTTTTGT
CTTTTCTCCAGGTGAATGTTAGGGCCCCGTTCATCATGGCTCAGGAGTGC
GCCAAGAGGATGATCGCCCGCGGGAAGGGCGGCAAGATCGTCAGCACATC
CAGCACGGCCTCTCTCTTCGCCCTGCACGACCACGCGGCCTACTGCACCA
GCAAGGCCGCCATCAACGGCCTCACCCAGGTGAGTCTCTTCGCCGAACGG
CAGTGTTCAAAAAAAGGCAGCAGTTCCATGCAATGATCCGTGGGCGGAGT
TAACCACTAACATGAGTTCCTCCCAGGTACTGTAGCTCGGGAGCCGTAAC
GACCCACCGGTATGCCTCACGAGGGTCAAAAGTGGCAGCTGTAGTGATGT
GCCCCACAGGGGTTAACCAAGTCATCGAAAGAGCGGAGCAGCACATTTGC
GCAGGTCTTCTAACAGGCGTGGTGTGTAGAAGGGCTGAACGGTGGAGAGT
GCAAGAGAGACCGGAGGGCGTGACTGGGTGGCAAGAAATATAAGAGAGGA
AGAGAGAGAGGGCCAGAGACTGAGGAGCCAAAACGGGGCAACAATGCACA
CGTTCGAGGAGCGATGAACGGGAGTTTGGTTGGAAAAGGCAATCGGCCGA
AGGGGAGGGAATGTAAGCGGCGGTGTTGCCTGGACATGGAGACTACACAA
AACGTCGTATTAGCTCGAACAACACTACGCATGGATGTACTTCGGTTGAT
GGATCGCCACCTATGATATCGCCTAAATTAACGATATATCTGCTGCACGA
CTCTACGGCCTCTTCGTGTGGTATGACAGGTGATGAGCGCGGAGTGGTCC
AAGTACGACATCAACTGCAACACGGTGGGCCCCACCATCGTCCTGACCGA
CATGGGCTCCAAGGCGTGGGGGTGAGTTGACACGGCCTTACATCTCTTTC
CTCTTGCCCTCCTCGAGTCTAGTTGTTTTTACGGCGTACAATACCTGCCG
GTATTGCCGTTCTGACACTTCGTGGCAGGACACAGCAGTAGTAGTGGCCG
TTCGTTGAACGACCCGCTCGTAGTCCATGGGGCATCCGCGTGCTGTAGTG
AAAATCCGCGTGGCGTACTCAAATTGGACATGGGCACAGAGCGCACGCTT
CCAGGAGTCCATGCCCGGGGAAAGCCCGGAACAAGTTGTCACCATAGTTT
GTGAGCGGCGAATTTTTCACCGCATGCGATCAATTTGGTTCTTAAACGGG
TCGGCGAAACCGAGGCACACGTCCCCTCTCCCCGTTTCACGTCGAATTGG
ATTGTGTTTTTTCTCCAGTCGTTTGGTCTTCTGGGTTTCCTGTCCCTGAT
AGACAGACGGACAAAAGGGTTTTGTCAGTACTGCGGTTTTTGGTGTACTC
GGAAAAGCTTTGCTCGTCAAGCACGGAATCCTCGCCTAGGTTACACGGGA
GAGCTCCTACCTGCGTACGAAGGCGGAAGAGCCACCACTTAGCGGGGACC
TGCTTCACGAGAGTGGAGGGGTGCCAGTGTGAACATTTCAATTGGTCAGT
TCGATTCGTGGTCGCCTCAAAAATTGGCTCCATTGTTTTGCTCCGCTCGC
TCCCTCTGCTGCGTGCAGCGAGCCGGAGAAGGGAGACCCCATGATTGACC
GCACCCCGCTCGGCCGCTTCGCGGAGCCGTGGGAGATGGCGCACGGCGTG
GTGTACCTGGTCAGCCCTTCGTCCGCCCAGATGTGCGGCCAGATGCTCCT
TCTAGACGGCGGCATCACCACCACCGGCACCCCCTGCGGAACTCAATACG
ATTAAACACAAGCGGTGTTGCGCATTGGTCCCGATTGGTTTTTATAGTCC
ATGTTTATCTTGTTTCAGGGCCAATGCAGAGCGTGCTTGATGTGCGGTCG
GGGTTGGTGTAGTATCGTTTATCCAACGTACCGCCCAACGCACCCCACTC
GCAAGTATTGGCGGCGTGAAAGTCTTTCTAGTGATGTACTTATCCCTGTG
CTTTATCCAGTCTGCTCTATGAGATACGGCAGTACACAAGTATTGAGCGC
AGTTTTAAATTCTCGCTGCTACAGGTTCAGACGAAACGCTGGTGTAAGGT
CGGGGAGCATGTGGAAGTGCATGCAACGACCTTGTCACGGCCGTTTGAGC
TTCTAGCGGTGTGTTCTTTGTGATTGGGGTGAAACCGTCGTAGAGGAGAA
CCATATGTCAAACCTGGGGTTGATTGTTTCCAGAGAGCGAAGAAGCTGAA
ATTGCATTTTTAGAAGAAAAGCTCGACGTGCGACTTTGAGGGTGGGTCTT
AACAAAAAAAGACGAATCGAAATCGATTTCGATTTCGATCAGGGGGTTGC
GTCCAAACAGCCGCAGAGTCAAAATCGAAATCGAAGTCGGAAAGACCAGC
CCGAAATTGCCCGTTGCAATGCTGCTAACCATGAGCACAAGGGTTACGTA
GCATCCTAGACAACGTCCAATGGCCCCGAACAACCGCCTGGTTGAGGTCG
ACACGTAGATACCGGTTTCCAGTCGAGACGCGACGTATTCACCGAGAAAC
GTGTGATCGAGTGCGGCCATGCGACACGGGAGAGGCCAAACAGCTGCCAA
AAAGCTGCCGTTGAACCAACAACAATTTACGTCGATGGCTGCATCTCGCT
CAATTTGGAGCAGTTGCTGCTGTGTCAGAGTATTCTGTGTTCTGCAAGAT
GTCAGCTTCATCGGAAGGTATCGCATGTATCGTGGACATCCCTACAGGTA
GCAGGGTAAGGGTCAAAGTGAAGGCATGTCCAGTTTTTCAGAGAGCGTGC
GCGGCACCCATAAGTTCCTCCTCGTGTGACGAGCCCGATTTCGATCGCGT
TTTCGATTTCT
back to top

Coding sequence (CDS) from alignment at C-linearis_contig8:1768767..1779527+

>mRNA_C-linearis_contig8.15603.1 ID=mRNA_C-linearis_contig8.15603.1|Name=mRNA_C-linearis_contig8.15603.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1686bp|location=Sequence derived from alignment at C-linearis_contig8:1768767..1779527+ (Chordaria linearis ClinC8C monoicous)
ATGCCTACCGGAAGACCCGCGCCCGAGGAGCCTCAGTTCCCGTGGAGGAG
CGATATGCTCGAGGGAAAGTACGCCATCGTGACGGGAGGGAGTGCGGGCA
TCGGTGCAGCCATCACGACTTCCCTGATGCCTACCGGAAGACCCGCGCCC
GAGGAGCCTCAGTTCCCGTGGAGGAGCGATATGCTCGAGGGAAAGTACGC
CATCGTGACGGGAGGGAGTGCGGGCATCGGTGCAGCCATCACGACTTCCC
TGCTCCAAGCAGGTGCCTCCGTCGTGGTTCTCGCGAGGAGCCGCAAGAAG
TTCGACGACCTCCTCCCCAAACTCGAGGAGAAGAAGCTTCCGGTGGACAA
GACCCACTTCATCTCCATCGATCTTGCGAGCACGGACGACATCAGGCGGG
CTGCCATCGAGGCGAACGAGTGGGCGGGCGGCTGCGCGGACATCCTCGTC
AACAACGCTCCAAGCAGGTGCCTCCGTCGTGGTTCTCGCGAGGAGCCGCA
AGAAGTTCGACGACCTCCTCCCCAAACTCGAGGAGAAGAAGCTTCCGGTG
GACAAGACCCACTTCATCTCCATCGATCTTGCGAGCACGGACGACATCAG
GCGGGCTGCCATCGAGGCGAACGAGTGGGCGGGCGGCTGCGCGGACATCC
TCGTCAACAACGCGGGCGTGGCCAGCATCGCCCCCATCCTCGAGGCCACC
GTCGAGGACTGGGACTGGACCATGAACCGGGCGTGGCCAGCATCGCCCCC
ATCCTCGAGGCCACCGTCGAGGACTGGGACTGGACCATGAACGTGAATGT
TAGGGCCCCGTTCATCATGGCTCAGGAGTGCGCCAAGAGGATGATCGCCC
GCGGGAAGGGCGGCAAGATCGTCAGCACATCCAGCACGGCCTCTCTCTTC
GCCCTGCACGACCACGCGGCCTACTGCACCAGCAAGGCCGCCATCAACGG
CCTCACCCAGGTGAATGTTAGGGCCCCGTTCATCATGGCTCAGGAGTGCG
CCAAGAGGATGATCGCCCGCGGGAAGGGCGGCAAGATCGTCAGCACATCC
AGCACGGCCTCTCTCTTCGCCCTGCACGACCACGCGGCCTACTGCACCAG
CAAGGCCGCCATCAACGGCCTCACCCAGGTGATGAGCGCGGAGTGGTCCA
AGTACGACATCAACTGCAACACGGTGGGCCCCACCATCGTCCTGACCGAC
ATGGGCTCCAAGGCGTGGGGGTGATGAGCGCGGAGTGGTCCAAGTACGAC
ATCAACTGCAACACGGTGGGCCCCACCATCGTCCTGACCGACATGGGCTC
CAAGGCGTGGGGCGAGCCGGAGAAGGGAGACCCCATGATTGACCGCACCC
CGCTCGGCCGCTTCGCGGAGCCGTGGGAGATGGCGCACGGCGTGGTGTAC
CTGGTCAGCCCTTCGTCCGCCCAGATGTGCGGCCAGATGCTCCTTCTAGA
CGGCGGCATCACCACCACCGGCACCCCCTGCGGAACTCAATACGATTAAC
GAGCCGGAGAAGGGAGACCCCATGATTGACCGCACCCCGCTCGGCCGCTT
CGCGGAGCCGTGGGAGATGGCGCACGGCGTGGTGTACCTGGTCAGCCCTT
CGTCCGCCCAGATGTGCGGCCAGATGCTCCTTCTAGACGGCGGCATCACC
ACCACCGGCACCCCCTGCGGAACTCAATACGATTAA
back to top