mRNA_C-linearis_contig8.15588.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI) HSP 1 Score: 512 bits (1318), Expect = 3.140e-168 Identity = 315/490 (64.29%), Postives = 337/490 (68.78%), Query Frame = 1
Query: 1 GGQPVAKLKTLDGEAFCSCLEMCFEHMLSVLSRVSQMHEALSSIVDSCQTSAGDGSXXXXXXXXXXXXXXXXREGTRXXXXXXXXXXXXASSARGRRGAADGGVGEGTGEPLAAAVTAEEGAVIVERSRSCLR---------------------ALSELMERSVSQLLSVRREHNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSLDSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPAQPNFVGGPRSG-RKGGRGERRREAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDA---VAQDYRDHRDKIFSKFVSMIEELIEARSGSLKLTNWDIPGGRAG 1395
GGQ VAKLKTLDGEAFCSCLEMCFEHM HE G G XXXXX G+ L++ VT+EEG+VIVERSRSCLR ALSELMERSVSQLLSVRREHNCTKLDV+ELKHLWDITV+FIQSVERLSG NGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKW QADVTPERQ VLDRLS+GQVF PS+ + NG GSG G NG +RLP GDPPAQPNFVGG RSG RKGGR ERRREAVV G+SFK VGSALLVAEMSANFLQFA HFP I TD+LTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVR++IP LK AL+ ++ + DYRDHRDKI +KFVSMIEELIEARSG+LKLT+WD PGG G
Sbjct: 544 GGQSVAKLKTLDGEAFCSCLEMCFEHM----------HEG-----------GGRGGEXXXXX---------------------------------------------VGDQLSSVVTSEEGSVIVERSRSCLRRDGRSLPSSASLLEKSFPPEEALSELMERSVSQLLSVRREHNCTKLDVDELKHLWDITVAFIQSVERLSGCNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWTQADVTPERQAVLDRLSSGQVF-RPSVSAANANGTDGKEGSGAGGGSGYDNGGLRLP--GDPPAQPNFVGGARSGGRKGGRAERRREAVVGGASFKAVGSALLVAEMSANFLQFADHFPTIGTDILTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRSLIPFLKAALSDEDCRRSTTSCWRRSGRRGARLDYRDHRDKILTKFVSMIEELIEARSGTLKLTDWDTPGGGRG 964
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A7S2S5D4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5D4_9STRA) HSP 1 Score: 265 bits (677), Expect = 3.080e-80 Identity = 158/338 (46.75%), Postives = 214/338 (63.31%), Query Frame = 1
Query: 367 VIVERSRSCLRALSELMERSVSQLLSVRREHNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSLDSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPAQPNFVGGPRSGRKGGRGERRR--EAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIEARSGSLKLTNWD 1374
++ + S+ LR +L ++++S LL +R+E + T L +EELK LW T F+Q VE+LSG + Y LRSTLL+QAKAF+E +HEA +LV LD+EKWAQADV+ ERQ LDRLSNGQ F S + + L S K +G +R EA+V GS +K V S LL+ EM + L A+HFP +ATDVL R+ EL+R+FNSRATQLVL AGAIHS A+L I+AKHLAL SQ LGLV A++P ++ AL+ +LP KHHLLLA +D V QDY DH ++I +KFVS++ E++E+++ + T+WD
Sbjct: 38 MLTDDSQKNLRDCCDLAQKTISNLLVMRKEVHTT-LSLEELKELWSATFEFLQLVEKLSGRSCYGLRSTLLAQAKAFLEHKHEAQLASLVATLDSEKWAQADVSSERQAALDRLSNGQAFLPRSYPKLQT------------QTSXXXXXXXXATLQS-------------SSAKRAKGTKREVGEAMVEGSRYKVVWSVLLLMEMVMSLLATAAHFPMLATDVLQRIVELVRLFNSRATQLVLQAGAIHSAARLTKITAKHLALTSQCLGLVMALLPHIRAALSAQLPPKHHLLLADLDRVKQDYVDHHERILTKFVSIVSEIVESQASQIPATDWD 349
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A7S2FL57_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FL57_9STRA) HSP 1 Score: 254 bits (649), Expect = 5.240e-76 Identity = 158/343 (46.06%), Postives = 221/343 (64.43%), Query Frame = 1
Query: 364 AVIVERSRSCLRALSELMERSVSQLLSVRREHNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSL--DSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPAQPNFVGGPRSGRKGGRGERR-REAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIEARSGSLKLTNWDIPG 1383
A +V S LR EL ++SV LL +R++ + T L +EELK +W++T F+ ++ER+SG + Y LRST+L+QAKAF+E + E +LV LD+EKW QADV+P+RQ +DRLS+GQ F +L + K N + A+ A + P + + G R+ R GGR R +A V GSSFK V S LL+ EM L A+HFP +ATDVL R+ EL+R+FN+RATQLVL AGAIHSTA+L I+AKHLAL Q LGLV A+IP ++ +L+ +LP KHHLLL+ MD V QD +H +I SKFVS++ E++++ + S+ T+W+ G
Sbjct: 23 AELVNVSLKTLRDTCELAQKSVGNLLVMRKDVHTT-LTIEELKEMWNVTFEFLTAMERISGRSCYALRSTMLAQAKAFLEHKQEVQMASLVATLDSEKWTQADVSPQRQQAIDRLSSGQAFLPGTLVTPTNKPNDHXXXXXXXXDNPVAATAAAGEVKRPSETEGRAVTTG--RTDR-GGRSRRELNDASVDGSSFKVVWSVLLLIEMVTAHLAIAAHFPMLATDVLQRVVELVRLFNTRATQLVLLAGAIHSTARLTKITAKHLALTCQCLGLVMALIPHVRASLSAQLPPKHHLLLSDMDRVKQDLMEHHGRIISKFVSIVAEIVDSLAPSIASTDWETGG 361
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A6H5LD30_9PHAE (Vps54 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD30_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.750e-73 Identity = 123/137 (89.78%), Postives = 130/137 (94.89%), Query Frame = 1
Query: 976 MSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIEARSGSLKLTNWDIPGG 1386
MSANFLQFA HFP I TD+LTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVR++IP LK AL+TRLPQKHHLLLAQMDAVAQDYRDHRDKI +KFVSMIEELIEARSG+LKLT+WD PGG
Sbjct: 1 MSANFLQFADHFPTIGTDILTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRSLIPFLKAALSTRLPQKHHLLLAQMDAVAQDYRDHRDKILTKFVSMIEELIEARSGTLKLTDWDTPGG 137
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA) HSP 1 Score: 258 bits (658), Expect = 6.930e-73 Identity = 177/456 (38.82%), Postives = 245/456 (53.73%), Query Frame = 1
Query: 13 VAKLKTLDGEAFCSCLEMCFEHMLSVLSRVSQMHEALSS--IVDSCQTSAGDGSXXXXXXXXXXXXXXXXREGTRXXXXXXXXXXXXASSARGRRGAADGGVGEGTGEPLAAAVTAEEGAVIVERSRSCLRALSELMERSVSQLLSVRREHNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSLDSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPAQPNFVGGPRSGRKGGRGERRREAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIEARSGSLKLTNWD 1374
V+KLKTL+ AF CL +CFEH+L+VL R H ++S V SA DG AS + P A V A + + LRA ++L+ERS+SQL+ VRR+ + T L ++L+ L D + F VE L GS+G KLR TLL+Q KA+VE H+ANK LV DV+PERQ ++D ++ G V S AS NGA P P+S R +R+REA++ G+ +K V S LL+ EM+ N L+ A++FPA A DVL RL ELLR++N+R QLVLGAGAI S ++L+SISAKHLALC+ SLGLVRA++P ++ A A LP+KH LLL +M+ V+Q++ +H +KI +KFVS+I+EL++A L+ +WD
Sbjct: 516 VSKLKTLEHSAFLDCLALCFEHVLAVLQRAVLFHRFMASRPAVAPHNGSAPDGDASTV-----------------------------ASDTK----------------PAATLVQAH-----TLHTAASLRAAADLVERSLSQLVGVRRDLHATSLSPQQLRALCDAALEFTSKVEALCGSSGSKLRVTLLNQTKAYVECHHDANKTKLV-----------DVSPERQAMMDHITGGHVLSHALAPSHLA---------------ASMNGAS-----------PAAAFAPQSTRSK---DRKREALLEGARYKAVWSTLLLVEMAYNQLRMAAYFPAAAPDVLGRLSELLRLYNARTMQLVLGAGAIQSASRLRSISAKHLALCAHSLGLVRALVPHMRAAFAAHLPRKHQLLLVEMERVSQEFGEHHEKILAKFVSIIQELVDAACPVLREEDWD 881
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A7S1TZU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZU2_9STRA) HSP 1 Score: 223 bits (568), Expect = 1.020e-60 Identity = 147/355 (41.41%), Postives = 199/355 (56.06%), Query Frame = 1
Query: 325 GEPLAAAVTAEEGAVIVERSRSCLRALSELMERSVSQLLSVRREHNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSLDSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPAQ----PNFVGGP-RSGRKGGRGERRREAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIEARSGSLKLTNWD 1374
G+ AA T E GA + + L+ EL +RS+ L+ +R+E N L +E+LK LWD + FI VE+L+G GY+LR TLLSQAK F+E + + K +LV LDAE+W +ADVTPERQ L+RL +G F R D + PL G P + P G +GRK RR + V+ G FK V S LL+ EMS + L + FPA+ DVL RL EL++++N+R+ LVL A S AKL SI AKHLAL SQSL LV V+P ++ AL LPQ+ LL+Q+D V Q+ +H I SK VSM+ ++ +A +L+ NWD
Sbjct: 517 GDAAAATGTTEGGASVARALKESLKNGCELAQRSIVSLILMRKEQNFC-LALEDLKALWDTVMRFIMQVEKLAGVTGYELRGTLLSQAKGFLEKKVQVQKASLVSTLDAERWVRADVTPERQAALERLVSGHAFL--------------------RVADLA---KSESPLAGSPVSSNAGSPTAANGDAHTGRK-----RREDVVLGGRRFKVVWSVLLLLEMSTDLLSILAIFPALVVDVLQRLLELVKLYNTRSYHLVLLGEATQSAAKLTSIRAKHLALSSQSLHLVTHVLPHVRAALLGHLPQQRRALLSQLDKVTQEVSEHHTSILSKLVSMVFDVFQAHRDTLRARNWD 842
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A7S2RDT9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RDT9_9STRA) HSP 1 Score: 219 bits (557), Expect = 3.060e-60 Identity = 145/354 (40.96%), Postives = 202/354 (57.06%), Query Frame = 1
Query: 382 SRSCLRALSELMERSVSQLLSVRRE-HNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSLDSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPA-QPNFVGGPRSGRKGGRGERRREAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIE-------------ARSGSL-KLTNWDIPGGRAG 1395
S + L A +EL +SV++LL +R+E H+ D E+K LWD ++F +E+ SG Y LRSTLL+QAKAFVE +HE+N +LV LD EKW+Q+DV+ ERQ L RL +G+ S + N P +P + N V +A V G F+ V S LL+ EM + A+HF +AT+V+ ++ ELLR+FN+R+TQLVL AGAIHS A+LKSI+AKHLAL +Q +GLV A++P ++ AL +LP K H LL +D + ++Y DH DK+FSKFVS+I ++E AR+ S+ K TN DI R G
Sbjct: 404 SPAALVAAAELSHKSVTELLRLRKEAHSLVSFD--EMKRLWDSCLAFTLQLEKYSGQKAYGLRSTLLAQAKAFVERQHESNMASLVAALDGEKWSQSDVSYERQATLTRLCSGRAVLS------------------------TTNRRNAQPSDSNPMINRDNMV----------------DAEVEGKHFRVVWSCLLLVEMVMGNVACAAHFQTLATNVVGKVSELLRLFNARSTQLVLSAGAIHSAARLKSINAKHLALVTQCIGLVLAILPHVRAALMAQLPNKQHTLLLDLDRIKKEYVDHNDKVFSKFVSIIGGIVEHGLVPRISKTNFDARAKSVRKKTNSDIKKSRCG 715
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A7S2XS08_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS08_9STRA) HSP 1 Score: 222 bits (565), Expect = 7.610e-60 Identity = 136/319 (42.63%), Postives = 192/319 (60.19%), Query Frame = 1
Query: 400 ALSELMERSVSQLLSVRREHNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSL------DSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPAQPNFVGGPRSGRKGGRGERRREAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIE 1338
A +EL+ERSVS+LL +R+E + + + EE++HLWD +SF S+ER SG Y LRSTLL+QAKAFVE +HE+N L LD+E+W Q DV+ ERQ L RL +G+ S + ST N N N + G P G++ +A V G +K V S LL+ EM + + A+HF +AT+V+ ++ ELLR+FNSRAT LVLGAGAIHS A+LKSI+AKHLAL +Q LGL +++P ++ AL +LP K H LL +D + ++Y +H +K+ +KFVS+I ++E
Sbjct: 597 AAAELIERSVSELLRMRKEAH-SLVTFEEMRHLWDTCLSFTLSLERASGGKAYGLRSTLLAQAKAFVERKHESNMANLAAALDSERWTQCDVSTERQASLIRLCSGRAVLSYTFGGDTPSSSTTTNVN---------------NATTSTTVNGTPKKD---------------GKKLADAEVEGIRYKVVWSCLLLVEMVMSNVACAAHFQTLATNVVGKVSELLRLFNSRATTLVLGAGAIHSAARLKSINAKHLALVTQCLGLFISILPHVRAALMAQLPSKQHTLLGDLDKIKKEYNEHNEKVLAKFVSIIGGVVE 884
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A7S4RD23_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RD23_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.480e-58 Identity = 131/317 (41.32%), Postives = 191/317 (60.25%), Query Frame = 1
Query: 388 SCLRALSELMERSVSQLLSVRREHNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSLDSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPAQPNFVGGPRSGRKGGRGERRREAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIE 1338
+ L A SEL +S+S+LL +R++ + + + +E+K LWD +++F +E+ SG Y LR TLL+QAKAFVE +HEAN +LV LD E+W Q DVT ERQ L RL +G+ L + K+ R G+++ N + ++ N + +A V G +K V S LL+ EM + + A+HF +AT+V+ ++ ELLR+FNSR+T LVL AGAIHS A+LKSI+AKHLAL +Q LGLV +P ++ AL +LP K H LL +D V ++Y DH +K+ SKFVS+I ++E
Sbjct: 414 TALSASSELAHKSISELLRLRKDSH-SLITFDEMKLLWDTSLAFTLQLEKYSGRKAYNLRGTLLAQAKAFVERKHEANMASLVAALDGERWTQCDVTAERQAALTRLCSGRAV----LSTNKITN---------RRGNSTGNDPTNITTXXXXSSKKN---------------KMSDAEVEGKRYKVVWSCLLLVEMVMSNVACAAHFQTLATNVVGKVVELLRLFNSRSTHLVLMAGAIHSAARLKSINAKHLALVTQCLGLVIGTLPHVRAALMAQLPSKQHTLLVDLDRVKKEYADHNEKVLSKFVSIIGGIVE 701
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Match: A0A7S2W529_9STRA (Vacuolar protein sorting-associated protein 54 n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W529_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.750e-58 Identity = 135/321 (42.06%), Postives = 190/321 (59.19%), Query Frame = 1
Query: 382 SRSCLRALSELMERSVSQLLSVRRE-HNCTKLDVEELKHLWDITVSFIQSVERLSGSNGYKLRSTLLSQAKAFVEARHEANKQTLVKRLDAEKWAQADVTPERQVVLDRLSNGQVFPSPSLDSTKVNGNGPGNGSGGREGDASCNGAMRLPLPGDPPA-QPNFVGGPRSGRKGGRGERRREAVVAGSSFKTVGSALLVAEMSANFLQFASHFPAIATDVLTRLGELLRVFNSRATQLVLGAGAIHSTAKLKSISAKHLALCSQSLGLVRAVIPLLKEALATRLPQKHHLLLAQMDAVAQDYRDHRDKIFSKFVSMIEELIE 1338
S + L A +EL +SV++LL +R+E H+ D E+K LWD ++F +E+ SG Y LRSTLL+QAKAFVE +HE+N +LV LD EKW+Q+DV+ ERQ L RL +G+ S + N P +P + N V +A V G F+ V S LL+ EM + A+HF +AT+V+ ++ ELLR+FN+R+TQLVL AGAIHS A+LKSI+AKHLAL +Q +GLV A++P ++ AL +LP K H LL +D + ++Y DH DK+FSKFVS+I ++E
Sbjct: 404 SPAALVAAAELSHKSVTELLRLRKEAHSLVSFD--EMKRLWDSCLAFTLQLEKYSGQKAYGLRSTLLAQAKAFVERQHESNMASLVAALDGEKWSQSDVSYERQATLTRLCSGRAVLS------------------------TTNRRNAQPSDSNPMINRDNMV----------------DAEVEGKHFRVVWSCLLLVEMVMGNVACAAHFQTLATNVVGKVSELLRLFNARSTQLVLSAGAIHSAARLKSINAKHLALVTQCIGLVLAILPHVRAALMAQLPNKQHTLLLDLDRIKKEYVDHNDKVFSKFVSIIGGIVE 682 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15588.1 >prot_C-linearis_contig8.15588.1 ID=prot_C-linearis_contig8.15588.1|Name=mRNA_C-linearis_contig8.15588.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=465bp GGQPVAKLKTLDGEAFCSCLEMCFEHMLSVLSRVSQMHEALSSIVDSCQTback to top mRNA from alignment at C-linearis_contig8:1611998..1616633- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15588.1 ID=mRNA_C-linearis_contig8.15588.1|Name=mRNA_C-linearis_contig8.15588.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4636bp|location=Sequence derived from alignment at C-linearis_contig8:1611998..1616633- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:1611998..1616633- >mRNA_C-linearis_contig8.15588.1 ID=mRNA_C-linearis_contig8.15588.1|Name=mRNA_C-linearis_contig8.15588.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2790bp|location=Sequence derived from alignment at C-linearis_contig8:1611998..1616633- (Chordaria linearis ClinC8C monoicous)back to top |