mRNA_C-linearis_contig8.15577.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: A0A6H5JJZ2_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJZ2_9PHAE) HSP 1 Score: 485 bits (1249), Expect = 1.280e-165 Identity = 228/283 (80.57%), Postives = 257/283 (90.81%), Query Frame = 2
Query: 35 QNTSTNLSLSDFPQLAFLAQGAMCKCFVAQGNPQYPEPVVLKLAIENGPREAERDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTLRARMDAARGGLGFWPGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFKGNRMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLVAEKG 883
++ S NL+LSDF QL+FLA+GAMCKCF+A +P+ P PVVLK+AIENGPREAER LN ELSLL++L+HP LT +LG+GQTPKG+TF+++E+LD GTLRARMDAARGGLGFWPGVRHA ELASVM YLH+DA+PGMC+LHRDLKPDNLGF+GN MKLVDLGLAKVIK SEAGVDEFYRMSGEVGSLRYM+PEVASQ PYNEK DVHSF VV+WELVTGWLPYAGLSP+MFMFQAV HGQRPLMQFGWD FK LLASCWAEDPRDRPGFA++HETL L+ EKG
Sbjct: 81 RDISCNLALSDFSQLSFLAKGAMCKCFLANSHPRIPGPVVLKMAIENGPREAERGLNSELSLLQNLTHPNLTMVLGAGQTPKGRTFVVMEYLDRGTLRARMDAARGGLGFWPGVRHAVELASVMAYLHDDAMPGMCILHRDLKPDNLGFRGNVMKLVDLGLAKVIKHSEAGVDEFYRMSGEVGSLRYMAPEVASQYPYNEKADVHSFGVVMWELVTGWLPYAGLSPEMFMFQAVQHGQRPLMQFGWDPDFKRLLASCWAEDPRDRPGFAYIHETLEALLVEKG 363
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: D7FJD0_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD0_ECTSI) HSP 1 Score: 239 bits (609), Expect = 5.630e-69 Identity = 128/311 (41.16%), Postives = 188/311 (60.45%), Query Frame = 2
Query: 53 LSLSDFPQ--LAFLAQGAMCKCFVAQGNP----------------------QYPEP---------VVLKLAIENGPRE--AERDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTLRARMDAARGGLGFWPGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFKGN-RMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLVAE 877
LSL DF Q +++LA+GAMC+CF+A+ P P P V++K E GP + +E DL E +LR L HP + +LG G T G +F+++E+L GTLR R+D GGLG P V++ +LAS + Y+H+ +PG+ ++HRDLKPDN+GF + + KL+D GLAK+I R++ Y M+GE GS RYM PEVA+ PYNEK DV SF V++WE+ +G LP+AG++ ++++ + + +RPL+Q W + FK+LL S W +DP RP F +H LS + +E
Sbjct: 163 LSLDDFDQDSVSYLAEGAMCQCFLARKIPASMNVPGGAGHVPSTDGSSSSCSRPNPAFESAREHGVIIKTPSE-GPNQQMSENDLVIESLVLRELHHPNIVGILGGGTTHTGASFIVLEYLSMGTLRGRLDKCGGGLGVGPAVKYGLQLASALSYMHDGGLPGIILMHRDLKPDNIGFAADGQAKLMDFGLAKIIHRTQRCGSVKYAMTGETGSPRYMPPEVATNQPYNEKADVWSFIVIVWEMASGRLPFAGMNMEVYLDKVCNGAERPLVQNPWPADFKSLLRSSWQKDPDKRPSFREIHAVLSGMCSE 472
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: D7FPH5_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPH5_ECTSI) HSP 1 Score: 219 bits (558), Expect = 1.460e-65 Identity = 103/128 (80.47%), Postives = 111/128 (86.72%), Query Frame = 2
Query: 506 DLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVH--ETLSTLVAEKG 883
DLGLAKVIK SEAGVDEFYRMSGEVGSLRYM+PEVASQ PYNEK DVHSF VV+WELVTGWLPY GLSP+MFMFQAV HGQRPLMQFGWD FK LLASCWA DPRDRPGFA++H + + V E+G
Sbjct: 10 DLGLAKVIKHSEAGVDEFYRMSGEVGSLRYMAPEVASQYPYNEKGDVHSFGVVMWELVTGWLPYGGLSPEMFMFQAVQHGQRPLMQFGWDPDFKRLLASCWAGDPRDRPGFAYIHVVKEVQRRVGEEG 137
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.200e-52 Identity = 102/246 (41.46%), Postives = 142/246 (57.72%), Query Frame = 2
Query: 188 AERDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTL------------RARMDAARGGLGFWPGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFK-GNRMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLV-AEKG 883
A ++ EL + LSH + AL+G+G T KG F+++E LDGGTL R R R L + + HA LA + Y H A+PG VLHRD+KPDN+GF +KL+D GLAKV+ + ++ Y +SGE GSLRYM+PEVA PYN K DV+SF ++LWE++ PY GL+ + F + V G+RP + W +L+ CW+ D RP F+ V E L+ ++ AEKG
Sbjct: 90 AINEIEAELDVHARLSHENIVALVGAGLTSKGVRFVVLERLDGGTLTQVLGYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMISAEKG 335
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 195 bits (495), Expect = 6.810e-52 Identity = 117/287 (40.77%), Postives = 162/287 (56.45%), Query Frame = 2
Query: 62 SDFPQLAFLAQGAMCKCFVAQGNPQYPEPVVLKLAIENGPREA--ERDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTL------------RARMDAARGGLGFWPGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGF-KGNRMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLVAE 877
S+ ++ FL G+ C + A N Q V+KL ++ A R+L E+ LL L++ + LLG+G P+ F++IE LDGGTL R R + + ++ ++A ++YLH++AIPG VLHRD+KPDN+GF K KL+DLGLAK + RSE D+ + M+GE GS RYM+PEVA PYNEK DVHS+ +VLWE+ T PY G++ D F V RP + W F LLA+CWAED + RP FA V L ++ E
Sbjct: 237 SELSEVEFLVNGSRCTIYTATYNHQ---ACVVKLLRKDAVDAAIVRRELELEMELLMRLNNENIVRLLGAGIEPE--RFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQ-DQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEMLQE 517
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: A0A6H5J869_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J869_9PHAE) HSP 1 Score: 189 bits (479), Expect = 1.080e-51 Identity = 111/282 (39.36%), Postives = 159/282 (56.38%), Query Frame = 2
Query: 86 LAQGAMCKCFVAQ--GNPQYPEPVVLK-LAIENGPREAE-RDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTLRARM---DAARGGLGF-------W----PGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFKGN--RMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLV 871
LA G C C+ GN + + V +K L N +++ +DL+RELS+L+ L HP + L G+GQ+P+G F+ E L GGTL A + D G F W +R A +AS + YLH++A+PG VLHRD+KP+NL F G+ +KL D GLAK+++ ++ D Y M+G GS+RYM+PEVA LP NE DV+SFA+VLWE+V+ LP+ + G RP + W + F LL CW+ D +RP A V + L ++
Sbjct: 50 LADGTGCTCWQGSLGGNDEGNKRVAIKTLKASNSTSDSDAKDLDRELSILQHLRHPNVVRLAGAGQSPEGGRFVATELLSGGTLSAAIGTQDRPEGTGWFQRFRVRTWFPMDEALRQAAGVASALAYLHDEAVPGAKVLHRDIKPNNLAFTGDFRTLKLFDFGLAKMLRPDDSIGDNLYTMTGNTGSMRYMAPEVARNLPANETADVYSFAIVLWEMVSLELPFQFYGVKQLSERVAFGGDRPRLAPDWPTGFTDLLTRCWSADLSERPSMAEVEKRLREVL 331
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA) HSP 1 Score: 196 bits (497), Expect = 3.260e-51 Identity = 113/306 (36.93%), Postives = 165/306 (53.92%), Query Frame = 2
Query: 41 TSTNLSLSDFPQLAFLAQGAMCKCFVAQGNPQYPEPVVLK--------LAIENGPREAERDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTL------------RARMDAARGGLGFWPGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFK-GNRMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLVAEKGISPS 895
TS +L S+ + +L G A N PVV+K LA+ EAE D++ +L H + +L G+G T KG FM++E LDGG+L R R + + ++ A +A M+YLH+DAIPG VLHRDLKPDN+GF +KL+D GLA+V++ S DE Y MSGE GSLRYM+PEVA PYN K DV+SF ++LWE++ P+ G+ + F + + G+RP + W + F ++ SCW+ D RP F V L+ ++ ++ ++ S
Sbjct: 370 TSLDLRWSNLSNVEYLTDGGNSWIHTAVLN---RHPVVVKWLKPECQDLAVAINEIEAELDIHAQLQ------HSHIVSLCGAGLTSKGSRFMVLERLDGGSLTQVLGYDTRIRDRRRRFWKKKHFTYVEVLKCARSIAEAMEYLHSDAIPGCMVLHRDLKPDNIGFTLDGTIKLIDFGLARVVENSSPDTDELYEMSGETGSLRYMAPEVADGQPYNHKADVYSFGIILWEMLAHKKPFDGMDKEQFFERVTYGGERPTINKKWPTEFTDIMKSCWSYDSESRPNFQTVVAKLNKILTKEKVAVS 666
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: B5Y4X7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4X7_PHATC) HSP 1 Score: 194 bits (492), Expect = 1.600e-50 Identity = 105/254 (41.34%), Postives = 147/254 (57.87%), Query Frame = 2
Query: 188 AERDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTL------------RARMDAARGGLGFWPGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFK-GNRMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLVA-EKGISPSAQDK 907
A ++ EL++ L H + AL+G+G T KG F+++E LDGGTL R R R + +R A +A M Y H +AIPG VLHRDLKPDN+GF +K++D GLAK+++ + D+ Y MSGE GSLRYM+PEVA LPYN DV+SF ++LWE+ P+ GL+ ++F + VH G+RP + W S +L++ CW D +RP F + L L+A EKG SA+ K
Sbjct: 416 AINEIEGELAVHSRLYHTNIVALIGAGTTSKGVRFVVLERLDGGTLTQMLGYDTRIRDRRRRFWRRKQFSYVDVLRVARSIADAMSYCHQEAIPGCMVLHRDLKPDNIGFTLDGTVKIIDFGLAKIVENASVDSDDIYTMSGETGSLRYMAPEVADALPYNAAADVYSFGIILWEMNATKKPFEGLNRELFYERVVHGGERPSLNRKWPSQLTSLISECWDADMHNRPRFKEIVGRLDALLAKEKGGPASAKKK 669
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 188 bits (477), Expect = 2.690e-50 Identity = 110/319 (34.48%), Postives = 162/319 (50.78%), Query Frame = 2
Query: 35 QNTSTNLSLSDFPQLAFLAQGAMCKCFVAQGNPQYPEPVVLKLAIEN--GPREAERDLNRELSLLRSLSHPFLTALLGSG------------------------QTPKGKTFMMIEFLDGGTLRARM------------DAARGGLGFWP-----GVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFKGN-RMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETL 859
Q NL + + +L G MC + A+ + VV+K+ ++ P A +DL E+ +L+ L HP + +LG+G + K F+++E+L GGTL M R W + A +LAS + YLH AI G V+HRDLKP+N+ F G+ R+KL D GLAK+++R + + Y M+GE GS RYM PEVA QLPYNEK DV+SF ++LWE+++ P+ GL+ F+ + G+RP +Q W + + L+ CW ED RP F V +TL
Sbjct: 34 QQVDLNLDFEELRDVQYLTNGGMCSIYTAEWRGRR---VVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTL 349
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Match: A0A836CC53_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC53_9STRA) HSP 1 Score: 189 bits (481), Expect = 7.110e-50 Identity = 101/279 (36.20%), Postives = 158/279 (56.63%), Query Frame = 2
Query: 50 NLSLSDFPQLAFLAQGAMCKCFVAQGNPQYPEPVVLKLAIENGPREAERDLNRELSLLRSLSHPFLTALLGSGQTPKGKTFMMIEFLDGGTLRARMDAARGGLGFWPGVRHATELASVMKYLHNDAIPGMCVLHRDLKPDNLGFKGN-RMKLVDLGLAKVIKRSEAGVDEFYRMSGEVGSLRYMSPEVASQLPYNEKTDVHSFAVVLWELVTGWLPYAGLSPDMFMFQAVHHGQRPLMQFGWDSTFKALLASCWAEDPRDRPGFAFVHETLSTLVAEKG 883
+++ +D ++ GAMC + A+ + + VVLK+ ++ PR + DL E+ LL+ L HP + A++ G+TP G FM +E L GG+L +D + G+ +A ++A +LH +AI G V+HRDLKPDN+ F + ++K+VD GLAKV++R A + E Y M+ + GSLR+M+PEV PYNEK DV+S+A+V W + LPY ++ F G RP + W + LL W + RP F + E+L ++A +G
Sbjct: 265 DVATADVADREYMTCGAMCNIYTARWH---GKQVVLKIPRDDAPRTSANDLELEMVLLKELGHPNICAMMFGGKTPTGTPFMAMEPLMGGSLTKVVDNMSRFAPWTQGLHYARDIACAFSFLHEEAIAGHIVIHRDLKPDNVCFTSDMKLKIVDFGLAKVVRRKYANLSEAYTMTSQTGSLRFMAPEVGLDKPYNEKVDVYSWALVCWYTLARILPYKTIAYRHFRTDVFDTGVRPDLAPSWPAELHNLLHDAWHPNFNQRPSFTVIVESLDAILASEG 540 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15577.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig8.15577.1 >prot_C-linearis_contig8.15577.1 ID=prot_C-linearis_contig8.15577.1|Name=mRNA_C-linearis_contig8.15577.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=330bp MCKCFVAQGNPQYPEPVVLKLAIENGPREAERDLNRELSLLRSLSHPFLTback to top mRNA from alignment at C-linearis_contig8:1514672..1519669- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig8.15577.1 ID=mRNA_C-linearis_contig8.15577.1|Name=mRNA_C-linearis_contig8.15577.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4998bp|location=Sequence derived from alignment at C-linearis_contig8:1514672..1519669- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig8:1514672..1519669- >mRNA_C-linearis_contig8.15577.1 ID=mRNA_C-linearis_contig8.15577.1|Name=mRNA_C-linearis_contig8.15577.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at C-linearis_contig8:1514672..1519669- (Chordaria linearis ClinC8C monoicous)back to top |