mRNA_C-linearis_contig8.15541.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15541.1
Unique NamemRNA_C-linearis_contig8.15541.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: D8LCB9_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB9_ECTSI)

HSP 1 Score: 566 bits (1459), Expect = 4.970e-202
Identity = 284/322 (88.20%), Postives = 295/322 (91.61%), Query Frame = 2
Query:  125 MKRSGSSTTSLTDMGVQGPNADNKLNIFESGEEGTLDYRLRFAMEEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVGKAEQGEVKSNLSVSRLSDMGSDIELDAAAQAFEDDEEGGVEGEGGDAGAGDEDGEYPTSLIA 1090
            MKRSGSSTTSLTDMGV   +A++KLNIFESGEEGTLDYRLRFAM EHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDT + GDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDE DETDWKVIVID+EDRWAPELNDVEDVERLLPGVV AIREWFRTYKVPDGKPENKFAL+ERCMGRSYAMKVVSECH+AWRNLVGKAE GEVKSNLSVSRLSDMGSDIEL++A  A ED+ +G             E GEYPTSLIA
Sbjct:    1 MKRSGSSTTSLTDMGVPAASAEDKLNIFESGEEGTLDYRLRFAMAEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTKFPGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDE-DETDWKVIVIDREDRWAPELNDVEDVERLLPGVVPAIREWFRTYKVPDGKPENKFALDERCMGRSYAMKVVSECHLAWRNLVGKAELGEVKSNLSVSRLSDMGSDIELESATNALEDEADGXXXXXXXXXXXXXE-GEYPTSLIA 320          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: A0A835YXT5_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT5_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 1.690e-140
Identity = 209/305 (68.52%), Postives = 240/305 (78.69%), Query Frame = 2
Query:  182 NADNKLNIFESGEEGTLDYRLRFAMEEHAHSQQVISVWHDIPLYVRDE-AEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVGKAEQG-EVKSNLSVSRLSDMGSDIELDAAAQAFEDDEEGGVEGEGGDAGAGDEDGEYPTSLIA 1090
            N+++ +N+  +GEEGTL+YR++  ME+H    +VIS WHDIPLYV DE + K TG LNFVCEIPRCSRKKFEIAT E GNPIKQD KKG+LREFKKGDIFFNYGCFPRTWEDPEH HPDTG  GDNDPLDVCEIG+RIV TGDVRQVKVLGVLAMID+  ETDWKVI ID +DRWAPELNDVEDVERLLPGVV +IREWFRTYK+PDGKP N F L ERCM R+YAMKV++EC++AW+ LV  A  G EV  NLSVS+L+D+ +++E D    A  D  E   +GE  D         YP SLIA
Sbjct:    4 NSNSSINLVSAGEEGTLEYRIQHVMEDH--DSKVISAWHDIPLYVLDEFSNKPTGLLNFVCEIPRCSRKKFEIATKEPGNPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPEHSHPDTGCAGDNDPLDVCEIGMRIVPTGDVRQVKVLGVLAMIDD-GETDWKVIAIDADDRWAPELNDVEDVERLLPGVVDSIREWFRTYKIPDGKPPNVFGLGERCMPRTYAMKVINECYLAWKTLVSNASLGGEVPRNLSVSKLTDLMAELEPDHVLSAS-DHLEATSDGEAED---------YPASLIA 295          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: A0A7S2V803_9STRA (Inorganic diphosphatase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V803_9STRA)

HSP 1 Score: 357 bits (916), Expect = 4.900e-119
Identity = 181/285 (63.51%), Postives = 211/285 (74.04%), Query Frame = 2
Query:  209 ESGEEGTLDYRLRFAMEEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVGKAEQGEVKSNLSVSRLSD--MGSDIELDAAAQ----AFE------DDEEGGVE 1027
            E G   TL+YR++      +  ++V+S+WHD+PLY  DE    TG LNFVCEIPRCSRKK+EIAT+E GNPIKQD KKG LR FKKGDIFFNYGCFPRTWEDP+ VHPD G  GDNDPLDVCEIG+RIV T +VRQVK+LGVL +ID+  E DWK+I ID+ DRWAPELND++DVERLLPGV+  IREWFRTYKVPDGKPEN F LEERCM + YAM VV+ECH AW+ LV    Q +   NLSV  L D  M +D   DA  Q    A+       DDE+GG+E
Sbjct:   69 EVGHADTLEYRIQHVELTDSEEKRVLSLWHDLPLYCTDEYGLRTGSLNFVCEIPRCSRKKYEIATDEPGNPIKQDEKKGQLRVFKKGDIFFNYGCFPRTWEDPDFVHPDVGVGGDNDPLDVCEIGIRIVPTAEVRQVKILGVLCLIDD-GEADWKIIAIDETDRWAPELNDMDDVERLLPGVIGTIREWFRTYKVPDGKPENVFGLEERCMPKEYAMHVVAECHQAWKGLV---TQQKPAKNLSVVNLKDLVMEADPSTDAPPQHQLDAYNAPAGDGDDEDGGIE 349          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: A0A6U4FME2_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FME2_9STRA)

HSP 1 Score: 343 bits (879), Expect = 2.820e-112
Identity = 172/269 (63.94%), Postives = 203/269 (75.46%), Query Frame = 2
Query:  197 LNIFESGEEGTLDYRLRFAMEEHAHSQQVISVWHDIPLYVRDE-AEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVGKAEQGEVKSNLSVSRLSDMGSDIELDAAAQAF 1000
            +++   G+EGT  +R++ A E    S + IS WHD+ L+ R+E +   TG LNFVCEIP+ SRKKFE+ATNE  NPIKQDTKKG+LREFKKGDIFFNYGCFPRTWEDP  VHPD G  GDNDPLDVCEIGL+IV TG VRQVKVLG L MID+  E DWKVIVID  DRWAP+LNDVEDVERLLPG VSA+REWFRTYK+PDGKP N+F L ERCM R YAM++V E H AWR LV    Q +   +L V  ++D+    E + AA+ +
Sbjct:  145 VSLSSLGDEGTQSHRVQAACER---SNEPISFWHDVALFHREEESNAATGALNFVCEIPKFSRKKFEVATNEPQNPIKQDTKKGMLREFKKGDIFFNYGCFPRTWEDPCFVHPDAGVGGDNDPLDVCEIGLQIVPTGAVRQVKVLGCLCMIDD-GEADWKVIVIDVNDRWAPDLNDVEDVERLLPGTVSAVREWFRTYKIPDGKPPNRFGLNERCMPREYAMQIVGETHHAWRRLV----QHQTSEDLHVPPVADIAHFDEDEEAAEEY 405          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: A0A7S4E7X2_9STRA (Inorganic diphosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7X2_9STRA)

HSP 1 Score: 335 bits (858), Expect = 1.470e-110
Identity = 160/236 (67.80%), Postives = 182/236 (77.12%), Query Frame = 2
Query:  203 IFESGEEGTLDYRLR-FAMEEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVGK 907
            I E G+ GT DYR+   A  E   +   +S+WHD+PL          G  NF+CEIP+C+RKKFE+AT E   PIKQD KKG+LREFKKGDIFFNYGCFPRTWEDP HV PDTGY GDNDPLDVCEIGLR V TG++R VKVLGVLAMID+ DETDWKV+ ID EDRWAPELND+ DVERL+PG VS IREWFRTYK+PDGKP NKFAL+E+CMG  YA KV+ E H  W +LV K
Sbjct:   63 IMERGQAGTKDYRVHVLAKGEEDMTVAELSLWHDVPLVAEG------GLFNFICEIPKCTRKKFEVATTEGATPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSPDTGYPGDNDPLDVCEIGLRQVQTGEIRPVKVLGVLAMIDD-DETDWKVVAIDAEDRWAPELNDINDVERLIPGTVSLIREWFRTYKIPDGKPPNKFALDEKCMGAKYAHKVIHETHTFWCDLVQK 291          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: A0A7S4A2D5_9STRA (Inorganic diphosphatase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2D5_9STRA)

HSP 1 Score: 330 bits (847), Expect = 7.770e-109
Identity = 159/266 (59.77%), Postives = 191/266 (71.80%), Query Frame = 2
Query:  203 IFESGEEGTLDYRLRFAMEEHAHSQQVISVWHDIPLYVRDEAEKCTGH-------LNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVGKAEQGEVKSNLSVSRLSDMGSDIEL 979
            I E G  G+ DYR+    ++ +   + +S+WHD+PL                    NFVCEIP+C+RKKFE+AT+E   PIKQD KKG+LREFKKGDIFFNYGCFPRTWEDP HV  DTGY GDNDPLDVCEIG+R + TG VR VKVLGVLAMID+ DETDWKV+ ID +DRWAPELNDVEDVERLLPG +S IREWFRTYK+PDGKP NKFALEERCM R+YA  V+ + H A+R+L+       +     +S L+ +  D E+
Sbjct:   55 ILERGSVGSKDYRVHVLQKDTSQRARELSLWHDVPLVAPSAPSSAPASPRNAPPLFNFVCEIPKCTRKKFEVATDETKCPIKQDEKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSKDTGYPGDNDPLDVCEIGIRQIGTGQVRAVKVLGVLAMIDD-DETDWKVVAIDVDDRWAPELNDVEDVERLLPGTISFIREWFRTYKIPDGKPPNKFALEERCMPRAYAHGVIRDTHAAYRDLLASGGHEGLHLPADISSLTGLARDSEI 319          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: F0YGD1_AURAN (Inorganic diphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGD1_AURAN)

HSP 1 Score: 330 bits (846), Expect = 1.870e-108
Identity = 160/245 (65.31%), Postives = 185/245 (75.51%), Query Frame = 2
Query:  203 IFESGEEGTLDYRLRFAMEEHAH----SQQVISVWHDIPLYVRDEA-EKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVGKAEQGE 922
            + E G   T DYR+       A     S + +S+WHD+PL   D A E  T   NFVCEIP+C+RKKFE+ATNE   PIKQDTKKG+LREFKKGDIFFNYGCFPRTWEDP H  PDTGY GDNDPLDVCEIGLR V TG++R VKVLGVLAMID+ DETDWKV+ ID EDRWA ELNDV+DVERLLPG V  IREWFRTYK+PDGKP NKFA EERC+  +YA+KV+ E H ++  L+ + +  E
Sbjct:   64 VLERGSANTTDYRVHVLDAPRAAGRSGSTKELSLWHDVPLVAADGAPESSTPTFNFVCEIPKCTRKKFEVATNEHVTPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHTSPDTGYPGDNDPLDVCEIGLRQVRTGEIRAVKVLGVLAMIDD-DETDWKVVAIDAEDRWASELNDVDDVERLLPGTVGLIREWFRTYKIPDGKPPNKFAFEERCLPAAYALKVIHETHESYLELIKEGKGHE 307          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: F0Y2P4_AURAN (Inorganic diphosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2P4_AURAN)

HSP 1 Score: 329 bits (843), Expect = 3.350e-108
Identity = 159/236 (67.37%), Postives = 184/236 (77.97%), Query Frame = 2
Query:  203 IFESGEEGTLDYRLRFAMEEHAHSQQV--ISVWHDIPLYVRDEAEKCTGHL-NFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLV 901
            I E G+ GT DYR+    ++   ++ V  +S+WHD+PL     + +  G L NF+CEIP+C+RKKFE+AT E   PIKQDTKKG+LREFKKGDIFFNYGCFPRTWEDP HV PDTGY GDNDPLDVCEIGLR + TG++R VKVLGVLAMID+ DETDWK++ ID  DRWA ELNDV DVERLLPG VS IREWFRTYK+PDGKP NKFAL E C G +YA KV+ E H AW NLV
Sbjct:   63 IMERGQAGTKDYRVHVLAKDGDEAKTVAELSLWHDVPLAAPGSSGR--GSLFNFICEIPKCTRKKFEVATTEGATPIKQDTKKGVLREFKKGDIFFNYGCFPRTWEDPRHVSPDTGYPGDNDPLDVCEIGLRQIQTGEIRAVKVLGVLAMIDD-DETDWKIVAIDAADRWASELNDVGDVERLLPGTVSLIREWFRTYKIPDGKPPNKFALGEECKGAAYAHKVIHETHEAWVNLV 295          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: W7TI24_9STRA (Inorganic diphosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TI24_9STRA)

HSP 1 Score: 323 bits (827), Expect = 9.740e-106
Identity = 164/285 (57.54%), Postives = 197/285 (69.12%), Query Frame = 2
Query:  170 VQGPNADNKLNIFESGEEGTLDYRLRFAMEEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVG-----------KAEQGEVKSNLSVSRLSDMGSDIELDAAA 991
            V   N  N+L   + GE  T+DYR+        H+Q+ IS+WH++PL+  D+  K TG LNF+CEIP+ +R+KFEI T E GNPIKQD K G  R F KGDIFFNYGCFPRTWEDP+HV  D G  GDNDPLDVCEIGLR + TG VRQVKVLGVL +ID+  E DWKVI ID+EDRWA ELNDV+DVERLLPG + A+REWFRTYK+PDGKPEN+FAL E  MG  Y M+V+ E H AW+ LV            +A    +  NLSV  L ++  DI+ D  A
Sbjct:    4 VASVNTINRLTKVQEGEHDTVDYRVHSL----DHNQERISLWHELPLFAVDDDAKPTGALNFICEIPKFTRRKFEICTTEAGNPIKQDQKNGKPRVFSKGDIFFNYGCFPRTWEDPQHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDD-GEADWKVIAIDEEDRWARELNDVQDVERLLPGTLDAVREWFRTYKIPDGKPENRFALGEEFMGVKYTMRVIRETHEAWKRLVKSSGGWRGDLSREASSQSLHRNLSVPSLEEL--DIDSDHQA 281          
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Match: A0A4D9D9A0_9STRA (Inorganic diphosphatase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9A0_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.400e-105
Identity = 164/285 (57.54%), Postives = 197/285 (69.12%), Query Frame = 2
Query:  170 VQGPNADNKLNIFESGEEGTLDYRLRFAMEEHAHSQQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPIKQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVCEIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDVEDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSECHMAWRNLVG-----------KAEQGEVKSNLSVSRLSDMGSDIELDAAA 991
            V   N  N+L   + GE  T+DYR+        H+Q+ IS+WH++PL+  D+  K TG LNF+CEIP+ +R+KFEI T E GNPIKQD K G  R F KGDIFFNYGCFPRTWEDP+HV  D G  GDNDPLDVCEIGLR + TG VRQVKVLGVL +ID+  E DWKVI ID+EDRWA ELNDV+DVERLLPG + A+REWFRTYK+PDGKPEN+FAL E  MG  Y M+V+ E H AW+ LV            +A    +  NLSV  L ++  DI+ D  A
Sbjct:    4 VASVNTINRLTKVQEGEHDTVDYRVHSL----DHNQERISLWHELPLFAVDDDAKPTGALNFICEIPKYTRRKFEICTTEAGNPIKQDQKNGKPRVFSKGDIFFNYGCFPRTWEDPQHVPEDVGVGGDNDPLDVCEIGLRQIPTGAVRQVKVLGVLCLIDD-GEADWKVIAIDEEDRWARELNDVQDVERLLPGTLDAVREWFRTYKIPDGKPENRFALGEEFMGVKYTMRVIRETHEAWKRLVKSSGGWRGDLSREASSQSLHRNLSVPSLEEL--DIDSDHQA 281          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB9_ECTSI4.970e-20288.20Inorganic diphosphatase n=1 Tax=Ectocarpus silicul... [more]
A0A835YXT5_9STRA1.690e-14068.52Inorganic diphosphatase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V803_9STRA4.900e-11963.51Inorganic diphosphatase n=1 Tax=Fibrocapsa japonic... [more]
A0A6U4FME2_9STRA2.820e-11263.94Inorganic diphosphatase n=1 Tax=Phaeomonas parva T... [more]
A0A7S4E7X2_9STRA1.470e-11067.80Inorganic diphosphatase n=1 Tax=Pelagomonas calceo... [more]
A0A7S4A2D5_9STRA7.770e-10959.77Inorganic diphosphatase n=1 Tax=Pelagomonas calceo... [more]
F0YGD1_AURAN1.870e-10865.31Inorganic diphosphatase n=1 Tax=Aureococcus anopha... [more]
F0Y2P4_AURAN3.350e-10867.37Inorganic diphosphatase n=1 Tax=Aureococcus anopha... [more]
W7TI24_9STRA9.740e-10657.54Inorganic diphosphatase n=1 Tax=Nannochloropsis ga... [more]
A0A4D9D9A0_9STRA1.400e-10557.54Inorganic diphosphatase n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1190155..1195518 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score568.9
Seed ortholog evalue1.5e-159
Seed eggNOG ortholog2880.D8LCB9
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categoryother localisation
EggNOG free text desc.inorganic diphosphatase activity
EggNOG OGsCOG0221@1,KOG1626@2759
Ec32 ortholog descriptioninorganic pyrophosphatase
Ec32 orthologEc-14_005330.1
EC3.6.1.1
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size1093
Cds size969
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930523.3213527-UTR-C-linearis_contig8:1190154..11902161622930523.3213527-UTR-C-linearis_contig8:1190154..1190216Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1190155..1190216 +
1690881113.2991433-UTR-C-linearis_contig8:1190154..11902161690881113.2991433-UTR-C-linearis_contig8:1190154..1190216Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1190155..1190216 +
1622930523.3363905-UTR-C-linearis_contig8:1192077..11921391622930523.3363905-UTR-C-linearis_contig8:1192077..1192139Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1192078..1192139 +
1690881113.316144-UTR-C-linearis_contig8:1192077..11921391690881113.316144-UTR-C-linearis_contig8:1192077..1192139Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 1192078..1192139 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930523.3568254-CDS-C-linearis_contig8:1192139..11922881622930523.3568254-CDS-C-linearis_contig8:1192139..1192288Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1192140..1192288 +
1690881113.327609-CDS-C-linearis_contig8:1192139..11922881690881113.327609-CDS-C-linearis_contig8:1192139..1192288Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1192140..1192288 +
1622930523.3872676-CDS-C-linearis_contig8:1192619..11928121622930523.3872676-CDS-C-linearis_contig8:1192619..1192812Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1192620..1192812 +
1690881113.3401673-CDS-C-linearis_contig8:1192619..11928121690881113.3401673-CDS-C-linearis_contig8:1192619..1192812Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1192620..1192812 +
1622930523.4128623-CDS-C-linearis_contig8:1193162..11933491622930523.4128623-CDS-C-linearis_contig8:1193162..1193349Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1193163..1193349 +
1690881113.3511677-CDS-C-linearis_contig8:1193162..11933491690881113.3511677-CDS-C-linearis_contig8:1193162..1193349Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1193163..1193349 +
1622930523.431823-CDS-C-linearis_contig8:1193710..11938401622930523.431823-CDS-C-linearis_contig8:1193710..1193840Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1193711..1193840 +
1690881113.3601315-CDS-C-linearis_contig8:1193710..11938401690881113.3601315-CDS-C-linearis_contig8:1193710..1193840Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1193711..1193840 +
1622930523.4540339-CDS-C-linearis_contig8:1195208..11955181622930523.4540339-CDS-C-linearis_contig8:1195208..1195518Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1195209..1195518 +
1690881113.3690655-CDS-C-linearis_contig8:1195208..11955181690881113.3690655-CDS-C-linearis_contig8:1195208..1195518Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 1195209..1195518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15541.1prot_C-linearis_contig8.15541.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 1192140..1195518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15541.1

>prot_C-linearis_contig8.15541.1 ID=prot_C-linearis_contig8.15541.1|Name=mRNA_C-linearis_contig8.15541.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=323bp
MKRSGSSTTSLTDMGVQGPNADNKLNIFESGEEGTLDYRLRFAMEEHAHS
QQVISVWHDIPLYVRDEAEKCTGHLNFVCEIPRCSRKKFEIATNEVGNPI
KQDTKKGLLREFKKGDIFFNYGCFPRTWEDPEHVHPDTGYQGDNDPLDVC
EIGLRIVATGDVRQVKVLGVLAMIDEVDETDWKVIVIDKEDRWAPELNDV
EDVERLLPGVVSAIREWFRTYKVPDGKPENKFALEERCMGRSYAMKVVSE
CHMAWRNLVGKAEQGEVKSNLSVSRLSDMGSDIELDAAAQAFEDDEEGGV
EGEGGDAGAGDEDGEYPTSLIA*
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mRNA from alignment at C-linearis_contig8:1190155..1195518+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15541.1 ID=mRNA_C-linearis_contig8.15541.1|Name=mRNA_C-linearis_contig8.15541.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5364bp|location=Sequence derived from alignment at C-linearis_contig8:1190155..1195518+ (Chordaria linearis ClinC8C monoicous)
CTCTGCTGCGGTCCGCGAAACTAGGGGAGACTACCCTTTGAGCGATTTAC TACCATTAACCGGTGAGAGAACACTTTGCATTGGATACAACGCAGCACTC GCTTGTTCCCTAACCTCTCTCTCTCTCTTCCCCCATGTGCCCCCTCTTTC TGGCACCGAAAACTCGCTCCGTAATTAGAGCTCGCCGGACAGAGTAGAAG GTTGGTTGCTTTAGGGTGCTCTCTCCTCAAGAGATAGTTGACGTATCCCT GAAAGGAGAAGTCTGTGTCCTGGGTATCTCTCTGCTCTCCTAGGTACAGT AGCCCAGGGGGGAAGCCGGGTGTTGGGGCCAGCACGCGTTGATGCGATTC GGTCAACTTCGGTCTGTGGGTGGCGATAACCAGCTGCTCCTGAATTTTGT TGCAGACGAAAGTGTTCGTTCTTTGCAAGGGAGCACCTGCGGGCACTCAC TCCATCGTTCGATGTTCTTTATTTTCGCACTAGCACGCACTGCACACACA GCACGCCATACATGCTGCTGTGTCGTGGTGGTAAAGAACCTCATTCTCTC GGGCCGAATGCAGCTGCCCTGTCGTATTTATCGGTCGAACTTGATCGAAT TAGCAAAAGCCGACACGCCGTCACGTACACCGCCTTTCATCGGCGGTCAA GAGACTTACCAGCCCCAACCCGTGGCGGACAACTCCTGAACCGTTTCCCG CATCAGCATCAGGAGCAGCAGTACAGCGGCAGCAATAGCAGCAGCAAAGA CATGAGCTTGAACAGCACCGGCGCGCCCTACCGCCAACCCCCAGAAAAAT TAACCCGCGTGTGTGTGTACTTGAGAAGTACGGTACGGAGTATGTGTGAG CGAGATGCGGAAATTTCCGGAAAAAGCATCTTGGGCGGGAGTGTCGGGTT CTGAGCAGGGGCCGAGACAACCAACAACAGATTCTGTTGCCGTCTGATGA TCGGATGTCATCATCGTCTGTTGAAGAATCGTAGAGTTTTGTTGCGATGT TTTGGGTGTTCCTCGATGGTGTACAGCAGTTTTGTGTGTGTGTGCCATCA AGGTTGCCGGCGGAGCAATCAAATGATACACTTGTCGGGGAAATTGCATC AAATCGATTATTGAGAGCAGTCCAGCATCATGAGAGCAGTCTGAGACAGC AGTGAACAAGCTTTATTAGGCAACTCGGGTGCGACTTTTGATGGCTATCA CAATCACGATCGTGCGATGCCGGCGTCTCCGCCGGAGTTTTAATTTCGGA AGTTTCTAGCGCTGCGGGCAGTCTGGCGCACGAAGTGCCCACGTTGTTTC TTGACACCGACCGCGAGTTAACGCGGAACCTTGCTCGTGGGCGGGCGGTT GTCCCATCAAAGGATTATTTGTACATGAAAATATCTTGCGACGGGTGCAA CGATGGAGAAGCACGTGAAGCAGAACAACAAACGTCGGCGTTGTGCAGTC TCGGCACAACGGCTCGAGTCCGCGCGCCGCTCAGCTGTTCGCCGATGCCG TGTACAAGTTGCACTTCGCGCTGTGTTTCGCTACTGCCTGTGTTGTTGAG ATAGCGACGGCTCACAGACAAACCAGCAGTAAGCAGTACCGGTATAGTAC ATAGCTCGCGCCCTCTTGCAAATCGGCGGACAATTGATTGCTCCGCGCAT GACGGTGTCAATCTTGACGAGGTTCCGCCGCTGCATCGGGCGGCTCTCTT CACTTTAACAAGTCCTTTTCTGTTCCTCTCAAGTTCCTTCGTCTATTAAT AGTTATTCCCAAGCCGCCGTCGAGTTTTGCTTGCACATCCTCCATGCCGT CTCTCGTGACCCATCCGCATTTGCAAAAAAATCGCGTCCTTACTCAATAC GTATGTTGTAGAAGTACAATATGTGCATATCATACCGGTTTTTTTTTTTC CCCATCATTCCGTGTGTTTTCAGCCAGGTGTTAATTTTCTCGGCATCCCT ACCTGTCAGCCAAGAGCAAGAGAAGCGTCATCACCATGAAGCGCAGCGGT TCCTCCACGACGAGCCTGACGGACATGGGCGTGCAGGGCCCGAACGCCGA TAACAAGCTCAACATCTTCGAGAGCGGCGAGGAAGGGACGCTGGACTACC GCCTCCGGTTCGCGATGGAGGAGCACGCCCACAGGTGCACACCATTTGAC GTAGTATCGACGCTTCTTGTACAGCAGTCGCCCGTTGTATGGTGGTAGAG TGGGAATTGTGAATTGTGCTTGTTCAAGCTTTCTCTGGGAGTAATCACGA CAGCAGTCAAAAGTTAGGTGAAGCGGACGTTGTTGGTAACTTTTCCCTTG GTCCTCAAGCGCCTTCACTCATGCATACTTGTACCCGTGTTAGCATCTCT TATCTGTCTCTCCAACCACCTCTGCCGTCCACCCCATCCAGCGAGGTTCA TAACCGATTCCTTTTTTTTTTCTGTTGCTGACCACGCACTTGATCAAAAA CATCAAACACAACAGCCAGCAGGTGATCTCCGTGTGGCACGACATCCCCC TCTACGTGCGCGACGAGGCAGAGAAGTGCACCGGCCACCTCAACTTCGTG TGCGAGATCCCTCGCTGCTCCCGCAAGAAGTTCGAGATCGCGACCAACGA GGTCGGGAACCCCATCAAGCAGGACACCAAGAAGGGACTGCTACGCGAAT TCAAGAAGGTGTGCTGTGTAATGTTATCGTGTCCATCTTTCCCCCCCCCA AGACGCACGCACACCTCCGCCAGCGGGCAGTGGCAGGCGCCCTGCGCGTT TTTGCCGACAAGTTTTTTTTCGTGCGAAGCGGCTCTTTATTTTAAAGTTT CCGACGGGGCTTCGCTTGGCTTGACGGGGGGCAGGACCCCGGATGACTCG CAGAACCACAAAAATGCGCGTATATTCGCGTTCGCGTGTTCTCTCCTCGG GTTTACTCTCCCTTCCTCTTTTCTTCACCATCGTGGTCATCCTTCTGCCA CTACTGGCGCGCACGTCCAACAACAAAAAACACGCACACAAAAAACCAAT GCTACCAGGGCGACATCTTCTTCAACTACGGGTGCTTCCCGCGAACGTGG GAGGACCCCGAGCACGTGCACCCGGACACGGGTTACCAGGGCGACAACGA CCCGCTGGACGTGTGCGAGATCGGGCTGCGCATCGTGGCCACCGGGGACG TGCGACAGGTCAAGGTGCTCGGGGTGCTGGCCATGATCGACGAAGGTAGG GCACGGAGGGACACACTCTTTCTTTTTTGGAACCCCTTGTCGAAAGGCCG CAACTCGCAGGAAAGCATTTACGTTCCTCCCGCGCGAAAGGCTGCCGTAT TTTCGTTGGTCAACCGGTTAGCGCGGTCGATACTACAGATTATAAAAACA CTCACGGACAGCGTACATCTACTTCGTGTTGTAGGTGGTTGCCGGGCCCG GCCCTCCGGTGCTGCCGCTCATTGTCTCCGCTGCATGATTTTTTGCGCTA TTCGTTTTAAACCATTTATTTTTTTGTTTGGTTGTGTGTTCCGTTATTTC CTTCCTTCTCTGGTCTGCCGCCTTGCCTCGCCTTGCCTTGCCTTGCCTTG GCTGAGTAGACGAGACCGACTGGAAGGTGATCGTGATCGACAAGGAGGAT CGATGGGCGCCGGAGCTGAACGACGTGGAAGACGTTGAGCGCCTGCTGCC CGGCGTGGTGTCGGCCATTCGCGAGTGGTTTCGAACGTGAGTCACGGGGA GGGGAGTCTTTGTCTTTCTTCTTCTCGGTGTTGGTGGCATGTGCGTTTTC TTGTGGATTTTATTTGCTCCACATCACGCCTCCATTCGAAATCGATGATG GTGGTTGGCCTTTGTCTTTTGGTGACTCGCGGGCCTTCCTTCTTCTTTTG CACCGGGTTTGTTTCTCCTCCGCGAGGGAGAGAGAGGCGGAGGTCTAGAG GCGTCGAAGACACCTGCGAAGTACGAGTATAAGTATAAAGTATTCCTGAA CGGCCTGAAAGCCGAGGGCGTGTCAAATTCGTCAGGAGAAAATTGGCGGT ATCATATATTTTATTCTCGTTTCTTCTTTTCACACAAAATTGCGCCGTCT ATTTGTCGAAATTTACGTTCTACACTGATGTACAGCGTTGTAAGCGCCTT CCGCGGTCGACCGTTCCTCTATTAGCTATTTTTTGAAAGGGTGTTACGAA CGAACCATACACGGCTAAGCTCTGAAAAATTGCGCACACTTTCGATGGGT TACGCGGATTACGATGTTTTTTTTTTATTTGGCCGTTCTGGTGGTCAGTT ACTCACGAAAAATCGCCTCTGCGGGTCCCCCAAGGAAATTGCAACCCTCC GAATCATTCGAAATTTCCAGGGATGATGGATGTAGCACCGTTGAGCACGT TTCCGAAAATCAGAATTGAAATACAAACATTGACTGCGCGACCTACATAT GCCCCTTCAGATTTTATGCAAGAAAGCGGGGGCAACCTGGGATGATATGG GATGATATTTGGATGACAATGAAATATCCCCCCGCCGGGCATACGTTCCA CATGTTGATTTAAGCTCTGCAGACTTCACTCTAGGGTAGTTTTGGGTCGG GGGTCACGAACATACATCATCAGAATACCCTCGTTCGGCAATGCAATCGA CTTACATTAGAGGTGGGCAACTGATGGGCTTTCGAGAGCAATTTCAAGAT TTCTGAGAAATTGACATCCGCTCACCACAGCGATTTTTTCTCCGATTGAC TTTCTGAGTAGCTCTACCCCCCCCTAAACCGACCAAGCGGAGTAGATTGG CGAGGTACTGTGTAACGAAGAAAAAAAAGTTCGGCAACGCGGTGAAACAA ACGCTCGGGTCGAAGGAAGACCTTTTTTTGGGGTCAACTTTTGCTTTTTT TGACGGCGTTTTTGGGCGTTTGAAAACAAACCACAAGTCGATTTTCCGAC GGTTGTATCTCTTCAGTGTGGCACAGCCCGGGGCGGTCAACCGCGGAAGG CGCCTACCAGTAAAAGGGCAACTGGGTACCAACCAATTGTTTGATTTTCC ATGGTGCTTATTTCTTCTTCTTCTTTTCTCCCCCCCCCCCCGTGCCTTTG GCAGTTACAAGGTCCCGGACGGCAAGCCCGAGAACAAGTTCGCGCTGGAG GAGCGGTGCATGGGTCGGTCGTACGCCATGAAGGTGGTGTCCGAGTGCCA CATGGCGTGGCGCAACCTGGTGGGCAAGGCCGAGCAGGGCGAGGTGAAGA GCAACCTGTCCGTGTCGAGGCTGAGCGATATGGGCTCGGACATCGAGCTG GACGCCGCGGCGCAGGCGTTCGAGGACGACGAGGAGGGGGGCGTGGAGGG GGAGGGGGGGGACGCGGGGGCAGGGGATGAGGACGGCGAGTACCCGACCT CTCTCATCGCGTGA
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Coding sequence (CDS) from alignment at C-linearis_contig8:1190155..1195518+

>mRNA_C-linearis_contig8.15541.1 ID=mRNA_C-linearis_contig8.15541.1|Name=mRNA_C-linearis_contig8.15541.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1938bp|location=Sequence derived from alignment at C-linearis_contig8:1190155..1195518+ (Chordaria linearis ClinC8C monoicous)
ATGAAGCGCAGCGGTTCCTCCACGACGAGCCTGACGGACATGGGCGTGCA
GGGCCCGAACGCCGATAACAAGCTCAACATCTTCGAGAGCGGCGAGGAAG
GGACGCTGGACTACCGCCTCCGGTTCGCGATGGAGGAGCACGCCCACAGA
TGAAGCGCAGCGGTTCCTCCACGACGAGCCTGACGGACATGGGCGTGCAG
GGCCCGAACGCCGATAACAAGCTCAACATCTTCGAGAGCGGCGAGGAAGG
GACGCTGGACTACCGCCTCCGGTTCGCGATGGAGGAGCACGCCCACAGCC
AGCAGGTGATCTCCGTGTGGCACGACATCCCCCTCTACGTGCGCGACGAG
GCAGAGAAGTGCACCGGCCACCTCAACTTCGTGTGCGAGATCCCTCGCTG
CTCCCGCAAGAAGTTCGAGATCGCGACCAACGAGGTCGGGAACCCCATCA
AGCAGGACACCAAGAAGGGACTGCTACGCGAATTCAAGAAGCCAGCAGGT
GATCTCCGTGTGGCACGACATCCCCCTCTACGTGCGCGACGAGGCAGAGA
AGTGCACCGGCCACCTCAACTTCGTGTGCGAGATCCCTCGCTGCTCCCGC
AAGAAGTTCGAGATCGCGACCAACGAGGTCGGGAACCCCATCAAGCAGGA
CACCAAGAAGGGACTGCTACGCGAATTCAAGAAGGGCGACATCTTCTTCA
ACTACGGGTGCTTCCCGCGAACGTGGGAGGACCCCGAGCACGTGCACCCG
GACACGGGTTACCAGGGCGACAACGACCCGCTGGACGTGTGCGAGATCGG
GCTGCGCATCGTGGCCACCGGGGACGTGCGACAGGTCAAGGTGCTCGGGG
TGCTGGCCATGATCGACGAAGGGCGACATCTTCTTCAACTACGGGTGCTT
CCCGCGAACGTGGGAGGACCCCGAGCACGTGCACCCGGACACGGGTTACC
AGGGCGACAACGACCCGCTGGACGTGTGCGAGATCGGGCTGCGCATCGTG
GCCACCGGGGACGTGCGACAGGTCAAGGTGCTCGGGGTGCTGGCCATGAT
CGACGAAGTAGACGAGACCGACTGGAAGGTGATCGTGATCGACAAGGAGG
ATCGATGGGCGCCGGAGCTGAACGACGTGGAAGACGTTGAGCGCCTGCTG
CCCGGCGTGGTGTCGGCCATTCGCGAGTGGTTTCGAACTAGACGAGACCG
ACTGGAAGGTGATCGTGATCGACAAGGAGGATCGATGGGCGCCGGAGCTG
AACGACGTGGAAGACGTTGAGCGCCTGCTGCCCGGCGTGGTGTCGGCCAT
TCGCGAGTGGTTTCGAACTTACAAGGTCCCGGACGGCAAGCCCGAGAACA
AGTTCGCGCTGGAGGAGCGGTGCATGGGTCGGTCGTACGCCATGAAGGTG
GTGTCCGAGTGCCACATGGCGTGGCGCAACCTGGTGGGCAAGGCCGAGCA
GGGCGAGGTGAAGAGCAACCTGTCCGTGTCGAGGCTGAGCGATATGGGCT
CGGACATCGAGCTGGACGCCGCGGCGCAGGCGTTCGAGGACGACGAGGAG
GGGGGCGTGGAGGGGGAGGGGGGGGACGCGGGGGCAGGGGATGAGGACGG
CGAGTACCCGACCTCTCTCATCGCGTGATTACAAGGTCCCGGACGGCAAG
CCCGAGAACAAGTTCGCGCTGGAGGAGCGGTGCATGGGTCGGTCGTACGC
CATGAAGGTGGTGTCCGAGTGCCACATGGCGTGGCGCAACCTGGTGGGCA
AGGCCGAGCAGGGCGAGGTGAAGAGCAACCTGTCCGTGTCGAGGCTGAGC
GATATGGGCTCGGACATCGAGCTGGACGCCGCGGCGCAGGCGTTCGAGGA
CGACGAGGAGGGGGGCGTGGAGGGGGAGGGGGGGGACGCGGGGGCAGGGG
ATGAGGACGGCGAGTACCCGACCTCTCTCATCGCGTGA
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